Operon IdGene Type COGgene PosLeft postRight Strand Function 1 cds-WP_002211647.1 CDS COG3486 1961 3289 - [Q] Lysine/ornithine N-monooxygenase iucC CDS COG4264 3286 5034 - [Q] Siderophore synthetase component cds-WP_002211649.1 CDS NA 5031 5981 - NA cds-A1122_RS21785 CDS COG4264 5965 7736 - [Q] Siderophore synthetase component 2 cds-WP_002231373.1 CDS NA 7987 9099 + NA cds-WP_002228661.1 CDS NA 9047 9241 + NA 3 cds-WP_002211652.1 CDS COG3485 9389 10222 - [Q] Protocatechuate 3,4-dioxygenase beta subunit 4 cds-WP_002211654.1 CDS COG4099 10599 11975 - [R] Predicted peptidase 5 cds-WP_002211655.1 CDS COG2771 12537 13280 + [K] DNA-binding HTH domain-containing proteins 6 cds-WP_002215903.1 CDS COG3916 13261 13911 - [TQ] N-acyl-L-homoserine lactone synthetase 7 cds-WP_002215902.1 CDS COG1266 15091 15741 + [R] Predicted metal-dependent membrane protease 8 cds-WP_002215900.1 CDS NA 16192 16587 + NA 9 cds-A1122_RS00070 CDS COG3677 16655 17013 + [L] Transposase and inactivated derivatives 10 cds-WP_002215898.1 CDS NA 17092 17463 + NA cds-A1122_RS24090 CDS NA 17506 17651 + NA 11 tssB CDS COG3516 18863 19363 + [S] Uncharacterized protein conserved in bacteria tssC CDS COG3517 19406 20950 + [S] Uncharacterized protein conserved in bacteria tssK CDS COG3522 20962 22314 + [S] Uncharacterized protein conserved in bacteria tssL CDS COG3455 22311 22997 + [S] Uncharacterized protein conserved in bacteria cds-WP_014465985.1 CDS COG2885 22997 24733 + [M] Outer membrane protein and related peptidoglycan-associated cds-WP_002210014.1 CDS COG3157 24737 25228 + [S] Hemolysin-coregulated protein (uncharacterized) 12 tssH CDS COG0542 25646 28294 + [O] ATPases with chaperone activity, ATP-binding subunit cds-WP_002210012.1 CDS COG3501 28291 30639 + [S] Uncharacterized protein conserved in bacteria cds-WP_002210011.1 CDS COG3179 30654 32876 + [R] Predicted chitinase 13 cds-WP_016590715.1 CDS NA 33020 33367 + NA 14 cds-WP_002216110.1 CDS NA 33531 33725 + NA cds-A1122_RS23140 CDS COG3677 33754 34327 + [L] Transposase and inactivated derivatives 15 cds-WP_002210010.1 CDS COG4253 34950 35585 + [S] Uncharacterized protein conserved in bacteria cds-WP_002210009.1 CDS COG3179 35601 37898 + [R] Predicted chitinase cds-WP_002210008.1 CDS NA 37885 38652 + NA 16 cds-WP_086016632.1 CDS COG3677 38748 38997 + [L] Transposase and inactivated derivatives cds-WP_086016632.1_2 CDS COG1662 38997 39445 + [L] Transposase and inactivated derivatives, IS1 family 17 cds-WP_002210005.1 CDS COG4253 40053 40688 + [S] Uncharacterized protein conserved in bacteria cds-A1122_RS21820 CDS COG4974 40712 41020 + [L] Site-specific recombinase XerD 18 rna-A1122_RS00185 tRNA NA 41273 41348 - NA 19 speF CDS COG1982 42017 44179 + [E] Arginine/lysine/ornithine decarboxylases 20 cds-WP_002210001.1 CDS COG1879 44735 45694 + [G] ABC-type sugar transport system, periplasmic component cds-WP_002210000.1 CDS COG1129 45740 47239 + [G] ABC-type sugar transport system, ATPase component cds-WP_002209999.1 CDS COG1172 47272 48255 + [G] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 21 cds-WP_002209998.1 CDS COG1629 48338 50371 - [P] Outer membrane receptor proteins, mostly Fe cds-WP_002209997.1 CDS COG0614 50475 51575 - [P] ABC-type Fe3+-hydroxamate transport system, periplasmic component 22 mltC CDS COG0741 51875 52951 - [M] Soluble lytic murein transglycosylase and related 23 cds-WP_002209994.1 CDS COG2924 53134 53406 - [CO] Fe-S cluster protector protein mutY CDS COG1194 53584 54699 - [L] A/G-specific DNA glycosylase 24 trmB CDS COG0220 55037 55756 + [R] Predicted S-adenosylmethionine-dependent methyltransferase cds-WP_002209990.1 CDS COG3171 55756 56082 + [S] Uncharacterized protein conserved in bacteria 25 glsB CDS COG2066 56193 57119 + [E] Glutaminase 26 cds-A1122_RS00250 CDS ROG7720 57231 57964 + NA 27 cds-WP_002224905.1 CDS COG2931 58463 67795 + [Q] RTX toxins and related Ca2+-binding proteins 28 hemW CDS COG0635 67985 69115 - [H] Coproporphyrinogen III oxidase and related Fe-S cds-WP_002215614.1 CDS COG0127 69108 69701 - [F] Xanthosine triphosphate pyrophosphatase yggU CDS COG1872 69801 70091 - [S] Uncharacterized conserved protein cds-WP_002209984.1 CDS COG0762 70088 70642 - [S] Predicted integral membrane protein 29 proC CDS COG0345 70930 71751 - [E] Pyrroline-5-carboxylate reductase cds-WP_002215609.1 CDS COG0325 71884 72582 - [R] Predicted enzyme with a TIM-barrel fold 30 cds-WP_002209981.1 CDS COG2805 72602 73726 + [NU] Tfp pilus assembly protein, pilus retraction 31 aguA CDS COG2957 73835 74950 - [E] Peptidylarginine deiminase and related enzymes aguB CDS COG0388 74954 75838 - [R] Predicted amidohydrolase 32 ruvX CDS COG0816 76018 76440 - [L] Predicted endonuclease involved in recombination (possible cds-WP_002209977.1 CDS COG1678 76440 77003 - [K] Putative transcriptional regulator gshB CDS COG0189 77119 78078 - [HJ] Glutathione synthase/Ribosomal protein S6 modification enzyme rsmE CDS COG1385 78104 78835 - [S] Uncharacterized protein conserved in bacteria 33 endA CDS COG2356 79087 79794 - [L] Endonuclease I cds-WP_002228059.1 CDS COG3091 79892 80404 - [S] Uncharacterized protein conserved in bacteria 34 metK CDS COG0192 80597 81751 - [H] S-adenosylmethionine synthetase 35 speA CDS COG1166 82958 84937 + [E] Arginine decarboxylase (spermidine biosynthesis) 36 cds-WP_002209968.1 CDS COG2146 85097 85417 + [PR] Ferredoxin subunits of nitrite reductase and 37 cds-WP_002209967.1 CDS COG4784 85707 86459 - [R] Putative Zn-dependent protease 38 tkt CDS COG0021 86950 88944 + [G] Transketolase 39 tnpA CDS COG1943 89252 89710 + [L] Transposase and inactivated derivatives 40 istA CDS COG4584 89894 90916 + [L] Transposase and inactivated derivatives istB CDS COG1484 90913 91695 + [L] DNA replication protein 41 epd CDS COG0057 92010 93026 + [G] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase pgk CDS COG0126 93129 94292 + [G] 3-phosphoglycerate kinase fbaA CDS COG0191 94412 95491 + [G] Fructose/tagatose bisphosphate aldolase 42 cds-A1122_RS23485 CDS NA 95536 95604 - NA 43 mscS CDS COG0668 95929 96798 + [M] Small-conductance mechanosensitive channel 44 argO CDS COG1279 97061 97678 + [R] Lysine efflux permease 45 cds-WP_002209959.1 CDS COG2968 97868 98647 + [S] Uncharacterized conserved protein 46 cds-WP_002209958.1 CDS COG0583 98658 99566 - [K] Transcriptional regulator 47 rpiA CDS COG0120 99908 100564 + [G] Ribose 5-phosphate isomerase 48 serA CDS COG0111 100871 102112 + [HE] Phosphoglycerate dehydrogenase and related dehydrogenases 49 cds-WP_190984442.1 CDS NA 102125 102226 - NA 50 cds-WP_002209955.1 CDS COG0212 102377 102973 - [H] 5-formyltetrahydrofolate cyclo-ligase 51 zapA CDS COG3027 103337 103666 - [S] Uncharacterized protein conserved in bacteria 52 cds-WP_002209953.1 CDS COG3079 104003 104581 + [S] Uncharacterized protein conserved in bacteria 53 pepP CDS COG0006 104669 105982 + [E] Xaa-Pro aminopeptidase ubiH CDS COG0654 106051 107229 + [HC] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases ubiI CDS COG0654 107402 108622 + [HC] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 54 gcvT CDS COG0404 109343 110440 + [E] Glycine cleavage system T protein (aminomethyltransferase) gcvH CDS COG0509 110509 110895 + [E] Glycine cleavage system H protein (lipoate-binding) gcvP CDS COG1003 111107 113986 + [E] Glycine cleavage system protein P (pyridoxal-binding), 55 cds-A1122_RS24095 CDS NA 114026 114094 - NA 56 cds-WP_002209946.1 CDS ROG1204 114364 114801 + NA cds-A1122_RS21860 CDS COG1028 114817 114912 + [IQR] Dehydrogenases with different specificities (related to 57 cds-WP_002209944.1 CDS NA 115862 116014 + NA cds-WP_011055729.1 CDS COG5295 116062 117987 + [UW] Autotransporter adhesin 58 cds-WP_002209943.1 CDS NA 118091 119194 + NA 59 cds-WP_002209942.1 CDS COG1272 119396 120097 + [R] Predicted membrane protein, hemolysin III homolog 60 cds-WP_002209941.1 CDS COG5472 120355 120852 + [S] Predicted small integral membrane protein 61 ygfZ CDS COG0354 120925 121917 - [R] Predicted aminomethyltransferase related to GcvT 62 sdhE CDS COG2938 122234 122500 + [S] Uncharacterized conserved protein cds-WP_002215144.1 CDS ROG5135 122481 122906 + NA creB CDS COG0745 122906 123604 + [TK] Response regulators consisting of a CheY-like creC CDS COG2205 123629 125047 + [T] Osmosensitive K+ channel histidine kinase 63 creD CDS COG4452 125168 126625 + [V] Inner membrane protein involved in colicin 64 fldB CDS COG0716 126715 127233 - [C] Flavodoxins 65 xerD CDS COG4974 127340 128239 + [L] Site-specific recombinase XerD dsbC CDS COG1651 128270 128986 + [O] Protein-disulfide isomerase recJ CDS COG0608 128993 130726 + [L] Single-stranded DNA-specific exonuclease 66 prfB CDS NA 130905 130979 + NA prfB_2 CDS COG1186 130981 132003 + [J] Protein chain release factor B lysS CDS COG1190 132013 133530 + [J] Lysyl-tRNA synthetase (class II) 67 rna-A1122_RS00565 tRNA NA 133724 133797 + NA 68 cds-WP_002209929.1 CDS COG0582 133963 135177 + [L] Integrase 69 cds-WP_002209928.1 CDS NA 135259 135444 - NA 70 cds-WP_002214784.1 CDS NA 135545 135670 - NA 71 cds-WP_002214785.1 CDS COG2026 136042 136302 + [JD] Cytotoxic translational repressor of toxin-antitoxin stability 72 cds-WP_002209925.1 CDS COG2522 136365 136727 + [R] Predicted transcriptional regulator 73 cds-WP_002214787.1 CDS ROG1466 136891 137187 + NA cds-WP_002209924.1 CDS ROG5946 137187 137585 + NA 74 cds-WP_002209923.1 CDS COG4643 137985 140276 - [S] Uncharacterized protein conserved in bacteria 75 cds-WP_002209922.1 CDS COG4679 140576 140902 + [S] Phage-related protein cds-WP_002209921.1 CDS ROG1754 140895 141047 + NA 76 cds-WP_002209920.1 CDS COG3311 141061 141261 - [K] Predicted transcriptional regulator 77 cds-WP_002214791.1 CDS NA 141443 141775 - NA cds-WP_002214792.1 CDS NA 141781 142017 - NA cds-WP_002209919.1 CDS NA 142030 142395 - NA 78 cds-WP_002209918.1 CDS COG3177 142664 143806 + [S] Uncharacterized conserved protein 79 cds-WP_002214794.1 CDS COG5529 144310 145848 + [R] Pyocin large subunit cds-WP_002214795.1 CDS ROG3026 145845 146039 + NA 80 cds-WP_002209915.1 CDS NA 146412 146615 + NA cds-WP_002214798.1 CDS NA 146662 146946 + NA 81 cds-WP_002209914.1 CDS NA 147356 149515 + NA cds-WP_002209913.1 CDS NA 149485 150252 + NA 82 cds-WP_002209912.1 CDS ROG4243 150857 151636 + NA 83 cds-WP_002209911.1 CDS COG4104 151892 152158 + [S] Uncharacterized conserved protein 84 cds-WP_002209910.1 CDS ROG5575 152241 152561 - NA cds-WP_002209909.1 CDS COG1695 152561 153241 - [K] Predicted transcriptional regulators 85 cds-A1122_RS24100 CDS COG2944 153518 153703 + [K] Predicted transcriptional regulator 86 cds-WP_002209908.1 CDS COG0791 153665 154522 - [M] Cell wall-associated hydrolases (invasion-associated proteins) 87 cds-WP_002209907.1 CDS NA 154898 155416 - NA 88 cds-WP_002209906.1 CDS COG1879 156195 157196 - [G] ABC-type sugar transport system, periplasmic component cds-WP_002209904.1 CDS COG1172 157631 158635 - [G] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components cds-WP_002209903.1 CDS COG1129 158707 160215 - [G] ABC-type sugar transport system, ATPase component 89 cds-WP_002209902.1 CDS COG3839 160764 161864 - [G] ABC-type sugar transport systems, ATPase components 90 cds-WP_002209901.1 CDS COG2182 162227 163462 + [G] Maltose-binding periplasmic proteins/domains cds-WP_223847766.1 CDS COG1175 163628 164929 + [G] ABC-type sugar transport systems, permease components cds-WP_002209899.1 CDS COG3833 164941 165792 + [G] ABC-type maltose transport systems, permease component cds-WP_002209898.1 CDS COG3867 165797 166999 + [G] Arabinogalactan endo-1,4-beta-galactosidase cds-WP_002209897.1 CDS COG1874 167050 169110 + [G] Beta-galactosidase cds-WP_002209896.1 CDS COG1264 169222 169533 + [G] Phosphotransferase system IIB components 91 cds-WP_002215759.1 CDS COG4580 169906 171165 - [G] Maltoporin (phage lambda and maltose receptor) 92 cds-WP_002209894.1 CDS COG1609 171437 172510 + [K] Transcriptional regulators 93 cds-WP_002209892.1 CDS COG1501 172839 175214 - [G] Alpha-glucosidases, family 31 of glycosyl hydrolases 94 cds-WP_002209891.1 CDS COG1585 175365 176672 - [OU] Membrane protein implicated in regulation of 95 cds-WP_002209890.1 CDS COG1609 177066 178148 + [K] Transcriptional regulators cds-WP_002215765.1 CDS NA 178138 178419 + NA 96 cds-WP_002209889.1 CDS COG0693 178389 178967 - [R] Putative intracellular protease/amidase cds-WP_002209888.1 CDS COG0191 178991 179845 - [G] Fructose/tagatose bisphosphate aldolase 97 cds-WP_002209887.1 CDS COG4289 179954 181441 - [S] Uncharacterized protein conserved in bacteria 98 cds-WP_002209886.1 CDS COG3119 181564 183171 - [P] Arylsulfatase A and related enzymes cds-WP_002209885.1 CDS COG0641 183192 184418 - [R] Arylsulfatase regulator (Fe-S oxidoreductase) 99 cds-WP_002209884.1 CDS COG4225 184662 185720 - [R] Predicted unsaturated glucuronyl hydrolase involved in kduD CDS COG1028 185736 186491 - [IQR] Dehydrogenases with different specificities (related to 100 nagA CDS COG1820 186687 187853 - [G] N-acetylglucosamine-6-phosphate deacetylase agaF CDS COG2893 187856 188296 - [G] Phosphotransferase system, mannose/fructose-specific component IIA cds-WP_002209880.1 CDS COG3716 188382 189272 - [G] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID agaW CDS COG3715 189262 190050 - [G] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC agaV CDS COG3444 190097 190594 - [G] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB cds-WP_002209877.1 CDS COG2222 190612 191778 - [M] Predicted phosphosugar isomerases kbaZ CDS COG4573 191775 193073 - [G] Predicted tagatose 6-phosphate kinase agaR CDS COG1349 193123 193899 - [KG] Transcriptional regulators of sugar metabolism 101 cds-WP_002209873.1 CDS COG3119 194739 196292 + [P] Arylsulfatase A and related enzymes 102 cds-A1122_RS24105 CDS NA 196576 196638 + NA 103 tnpA_2 CDS COG1943 196744 197178 - [L] Transposase and inactivated derivatives 104 istA_2 CDS COG4584 197235 198257 + [L] Transposase and inactivated derivatives istB_2 CDS COG1484 198254 199036 + [L] DNA replication protein 105 cds-WP_002214081.1 CDS ROG0692 199381 202494 - NA 106 yapM CDS COG4625 202564 204750 - [S] Uncharacterized protein with a C-terminal OMP 107 cds-WP_002209868.1 CDS NA 204865 205815 - NA 108 cds-WP_002214085.1 CDS NA 206418 206606 - NA 109 cds-WP_002220090.1 CDS COG0288 207102 207857 + [P] Carbonic anhydrase 110 cds-WP_002209866.1 CDS COG3710 208600 209016 + [K] DNA-binding winged-HTH domains 111 cds-WP_002209865.1 CDS COG3031 209186 209587 + [U] Type II secretory pathway, component PulC gspD CDS COG1450 209668 211590 + [NU] Type II secretory pathway, component PulD gspE CDS COG2804 211587 213098 + [NU] Type II secretory pathway, ATPase PulE/Tfp cds-WP_002214090.1 CDS COG1459 213085 213279 + [NU] Type II secretory pathway, component PulF cds-WP_002229014.1 CDS COG1459 213240 214286 + [NU] Type II secretory pathway, component PulF gspG CDS COG2165 214306 214743 + [NU] Type II secretory pathway, pseudopilin PulG 112 cds-WP_002362851.1 CDS NA 214859 215290 + NA gspI CDS ROG4211 215328 215672 + NA gspJ CDS COG4795 215665 216261 + [U] Type II secretory pathway, component PulJ cds-WP_002214094.1 CDS COG3156 216270 217226 + [U] Type II secretory pathway, component PulK gspL CDS COG3297 217210 218400 + [U] Type II secretory pathway, component PulL cds-WP_002226092.1 CDS NA 218409 218858 + NA cds-WP_002209856.1 CDS COG1989 218887 219726 + [NOU] Type II secretory pathway, prepilin signal 113 gspS CDS NA 219771 220091 - NA 114 cds-WP_002214099.1 CDS COG3710 220375 221091 + [K] DNA-binding winged-HTH domains cds-WP_002214100.1 CDS NA 221088 221489 + NA 115 cds-WP_002209853.1 CDS COG0840 221644 223335 + [NT] Methyl-accepting chemotaxis protein 116 cds-WP_002209852.1 CDS COG3531 223321 223956 - [O] Predicted protein-disulfide isomerase 117 cds-WP_002209850.1 CDS ROG1649 224069 224956 - NA 118 cds-WP_002209849.1 CDS COG0583 225063 225971 + [K] Transcriptional regulator 119 cds-WP_002209848.1 CDS COG2814 226340 227500 + [G] Arabinose efflux permease 120 cds-WP_002214101.1 CDS COG0583 227497 228438 - [K] Transcriptional regulator 121 lysA CDS COG0019 228653 229915 + [E] Diaminopimelate decarboxylase 122 galR CDS COG1609 229912 230934 - [K] Transcriptional regulators 123 cds-WP_002209844.1 CDS COG0243 231244 233505 + [C] Anaerobic dehydrogenases, typically selenocysteine-containing 124 aas CDS COG0318 233954 236110 + [IQ] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II lplT CDS ROG5513 236107 237327 + NA 125 cds-A1122_RS24115 CDS COG3122 237383 237475 - [S] Uncharacterized protein conserved in bacteria 126 cds-WP_002209840.1 CDS NA 237668 237919 + NA 127 cds-WP_002209839.1 CDS COG0667 238296 239336 - [C] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 128 mutH CDS COG3066 239671 240357 - [L] DNA mismatch repair protein 129 rppH CDS COG0494 241054 241581 + [LR] NTP pyrophosphohydrolases including oxidative damage repair ptsP CDS COG3605 241594 243840 + [T] Signal transduction protein containing GAF and 130 lgt CDS COG0682 244091 244963 + [M] Prolipoprotein diacylglyceryltransferase thyA CDS COG0207 244970 245764 + [F] Thymidylate synthase 131 cds-A1122_RS24600 CDS COG2165 246000 246395 + [NU] Type II secretory pathway, pseudopilin PulG 132 istA_3 CDS COG4584 246483 247505 + [L] Transposase and inactivated derivatives istB_3 CDS COG1484 247502 248284 + [L] DNA replication protein 133 cds-WP_002211386.1 CDS NA 248335 248466 - NA 134 cds-WP_002211387.1 CDS COG1020 248492 254950 + [Q] Non-ribosomal peptide synthetase modules and related cds-WP_002214915.1 CDS COG1020 254958 256646 + [Q] Non-ribosomal peptide synthetase modules and related cds-WP_002211388.1 CDS COG1020 256659 262478 + [Q] Non-ribosomal peptide synthetase modules and related cds-WP_002230168.1 CDS COG1748 262475 263227 + [E] Saccharopine dehydrogenase and related proteins cds-WP_002230167.1 CDS NA 263245 263550 + NA cds-WP_002211390.1 CDS COG4693 263547 264674 + [Q] Oxidoreductase (NAD-binding), involved in siderophore biosynthesis cds-WP_002214925.1 CDS COG3208 264667 265431 + [Q] Predicted thioesterase involved in non-ribosomal peptide cds-WP_002211392.1 CDS COG3619 265421 266725 + [S] Predicted membrane protein cds-WP_002214927.1 CDS COG1132 266725 268497 + [V] ABC-type multidrug transport system, ATPase and cds-WP_002211394.1 CDS COG4988 268490 270247 + [CO] ABC-type transport system involved in cytochrome 135 cds-WP_002211395.1 CDS NA 270570 271445 - NA 136 cds-WP_002228079.1 CDS NA 271881 272279 - NA 137 gntP CDS COG2610 273819 275162 + [GE] H+/gluconate symporter and related permeases 138 cds-WP_002213742.1 CDS NA 276163 277821 + NA 139 cds-WP_269441381.1 CDS COG3468 277938 279926 + [MU] Type V secretory pathway, adhesin AidA 140 vgrG CDS COG3501 280512 282737 + [S] Uncharacterized protein conserved in bacteria cds-WP_002211401.1 CDS COG0457 282763 284082 + [R] FOG: TPR repeat cds-WP_002211402.1 CDS COG3209 284096 288412 + [M] Rhs family protein 141 cds-WP_002211403.1 CDS NA 288687 288929 + NA 142 cds-WP_002211404.1 CDS NA 289473 289886 + NA 143 cds-WP_002211405.1 CDS COG0471 290066 291436 - [P] Di- and tricarboxylate transporters 144 cds-WP_002211406.1 CDS COG1609 291718 292737 - [K] Transcriptional regulators 145 cds-WP_002211407.1 CDS ROG2976 293031 294194 + NA 146 cds-WP_100067904.1 CDS COG2963 294988 295438 - [L] Transposase and inactivated derivatives cds-WP_100067904.1_2 CDS NA 294084 294988 - NA 147 cds-WP_002213746.1 CDS NA 296051 296353 + NA 148 cds-A1122_RS01255 CDS COG3133 296603 297071 + [M] Outer membrane lipoprotein 149 cds-WP_002353780.1 CDS COG3152 297231 297488 - [S] Predicted membrane protein 150 cds-WP_002211409.1 CDS ROG6232 297586 298041 - NA cds-WP_002211410.1 CDS NA 298038 298634 - NA 151 lafU CDS COG1360 299094 300005 - [N] Flagellar motor protein motA CDS COG1291 300005 300871 - [N] Flagellar motor component cds-WP_002211413.1 CDS COG1191 300887 301582 - [K] DNA-directed RNA polymerase specialized sigma subunit cds-WP_002211414.1 CDS ROG4396 301588 302058 - NA cds-WP_002211415.1 CDS COG3144 302097 303278 - [N] Flagellar hook-length control protein cds-WP_002211416.1 CDS ROG5284 303280 303606 - NA fliS CDS COG1516 303608 303988 - [NUO] Flagellin-specific chaperone FliS fliD CDS COG1345 303998 305275 - [N] Flagellar capping protein cds-WP_002211419.1 CDS COG1344 305495 306700 - [N] Flagellin and related hook-associated proteins cds-WP_002211420.1 CDS COG1344 306983 308182 - [N] Flagellin and related hook-associated proteins 152 cds-WP_002213753.1 CDS COG1344 308697 309911 - [N] Flagellin and related hook-associated proteins 153 cds-WP_002211422.1 CDS COG3710 310537 311583 + [K] DNA-binding winged-HTH domains cds-WP_002211423.1 CDS NA 311564 312010 + NA 154 cds-WP_002211424.1 CDS NA 312174 313187 - NA flgL CDS ROG2760 313199 314122 - NA flgK CDS COG1256 314151 315512 - [N] Flagellar hook-associated protein cds-WP_002211427.1 CDS COG3951 315625 315918 - [MNO] Rod binding protein cds-WP_002211428.1 CDS COG1706 315928 317103 - [N] Flagellar basal-body P-ring protein flgH CDS COG2063 317117 317782 - [N] Flagellar basal body L-ring protein flgG CDS COG4786 317817 318602 - [N] Flagellar basal body rod protein cds-A1122_RS01380 CDS COG4787 318670 319287 - [N] Flagellar basal body rod protein 155 tnpA_3 CDS COG1943 319430 319888 + [L] Transposase and inactivated derivatives 156 cds-A1122_RS24135 CDS COG4787 319996 320112 - [N] Flagellar basal body rod protein flgE CDS COG1749 320112 321353 - [N] Flagellar hook protein FlgE flgD CDS COG1843 321408 322064 - [N] Flagellar hook capping protein flgC CDS COG1558 322067 322492 - [N] Flagellar basal body rod protein flgB CDS COG1815 322495 322941 - [N] Flagellar basal body protein 157 flgA CDS COG1261 322999 323847 + [NO] Flagellar basal body P-ring biosynthesis protein flgM CDS COG2747 324076 324342 + [KNU] Negative regulator of flagellin synthesis (anti-sigma28 flgN CDS ROG2195 324349 324774 + NA 158 fliJ CDS ROG5264 325102 325485 - NA fliI CDS COG1157 325489 326829 - [NU] Flagellar biosynthesis/type III secretory pathway ATPase fliH CDS COG1317 326822 327538 - [NU] Flagellar biosynthesis/type III secretory pathway protein cds-WP_002211442.1 CDS COG1536 327543 328586 - [N] Flagellar motor switch protein fliF CDS COG1766 328558 330198 - [NU] Flagellar biosynthesis/type III secretory pathway lipoprotein fliE CDS COG1677 330208 330588 - [NU] Flagellar hook-basal body protein cds-WP_002211445.1 CDS COG2204 330605 331633 - [T] Response regulator containing CheY-like receiver, AAA-type 159 cds-WP_002211446.1 CDS COG1868 332156 333055 + [N] Flagellar motor switch protein fliN CDS COG1886 333048 333461 + [NU] Flagellar motor switch/type III secretory pathway fliP CDS COG1338 333458 334228 + [NU] Flagellar biosynthesis pathway, component FliP fliQ CDS COG1987 334230 334502 + [NU] Flagellar biosynthesis pathway, component FliQ cds-WP_002213766.1 CDS COG1684 334509 335282 + [NU] Flagellar biosynthesis pathway, component FliR flhB CDS COG1377 335282 336415 + [NU] Flagellar biosynthesis pathway, component FlhB cds-A1122_RS01500 CDS COG1298 336402 338500 + [NU] Flagellar biosynthesis pathway, component FlhA 160 cds-WP_002228082.1 CDS NA 338721 339290 + NA 161 cds-WP_002211454.1 CDS COG4461 339382 340377 - [S] Uncharacterized protein conserved in bacteria, putative 162 fepB CDS COG4592 341233 342312 + [P] ABC-type Fe2+-enterobactin transport system, periplasmic component 163 cds-WP_002211456.1 CDS COG3539 342524 343630 - [NU] P pilus assembly protein, pilin FimA cds-WP_002211457.1 CDS COG3121 343655 344374 - [NU] P pilus assembly protein, chaperone PapD cds-WP_002211458.1 CDS COG3188 344392 346872 - [NU] P pilus assembly protein, porin PapC 164 tnpA_4 CDS COG1943 347225 347683 - [L] Transposase and inactivated derivatives tnpA_5 CDS COG1943 347935 348393 - [L] Transposase and inactivated derivatives 165 cds-WP_002211459.1 CDS COG4960 348593 349015 + [OU] Flp pilus assembly protein, protease CpaA cds-WP_002211460.1 CDS NA 349067 349933 + NA cds-WP_002213778.1 CDS COG4964 349930 350784 + [U] Flp pilus assembly protein, secretin CpaC cds-WP_002228297.1 CDS COG4964 350799 351248 + [U] Flp pilus assembly protein, secretin CpaC cds-WP_002213782.1 CDS NA 351245 351535 + NA cds-WP_002213784.1 CDS COG4963 351546 352673 + [U] Flp pilus assembly protein, ATPase CpaE cds-WP_002213785.1 CDS COG4962 352685 353971 + [U] Flp pilus assembly protein, ATPase CpaF cds-WP_002212164.1 CDS COG4965 353968 354843 + [U] Flp pilus assembly protein TadB cds-WP_002212165.1 CDS COG2064 354840 355673 + [NU] Flp pilus assembly protein TadC cds-WP_002212166.1 CDS COG5010 355657 356427 + [U] Flp pilus assembly protein TadD, contains cds-WP_002357277.1 CDS COG4961 356424 356897 + [U] Flp pilus assembly protein TadG tadF CDS NA 356881 357453 + NA cds-WP_002212169.1 CDS COG4961 357478 359034 + [U] Flp pilus assembly protein TadG 166 exbD CDS COG0848 359131 359562 - [U] Biopolymer transport protein exbB CDS COG0811 359566 360603 - [U] Biopolymer transport proteins 167 metC CDS COG0626 361082 362293 + [E] Cystathionine beta-lyases/cystathionine gamma-synthases 168 cds-WP_002212173.1 CDS COG0586 362486 363148 + [S] Uncharacterized membrane-associated protein 169 cds-WP_002213786.1 CDS COG2207 363240 364133 - [K] AraC-type DNA-binding domain-containing proteins 170 yqhD CDS COG1979 364531 365688 + [C] Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 171 cds-WP_002216186.1 CDS NA 365751 365960 - NA 172 dkgA CDS COG0656 366107 366940 + [R] Aldo/keto reductases, related to diketogulonate reductase 173 cds-A1122_RS01655 CDS COG1032 366962 369306 - [C] Fe-S oxidoreductase 174 ftsP CDS COG2132 369614 371038 - [Q] Putative multicopper oxidases 175 cds-WP_002212177.1 CDS COG0204 371217 371948 - [I] 1-acyl-sn-glycerol-3-phosphate acyltransferase 176 parC CDS COG0188 372237 374510 - [L] Type IIA topoisomerase (DNA gyrase/topo II, 177 cds-WP_002216196.1 CDS NA 374493 374741 + NA 178 cds-WP_002212179.1 CDS COG2249 374814 375398 + [R] Putative NADPH-quinone reductase (modulator of drug 179 cds-WP_002212180.1 CDS COG0583 375456 376367 - [K] Transcriptional regulator parE CDS COG0187 376371 378266 - [L] Type IIA topoisomerase (DNA gyrase/topo II, yqiA CDS COG3150 378368 378949 - [R] Predicted esterase cpdA CDS COG1409 378949 379776 - [R] Predicted phosphohydrolases cds-WP_002212183.1 CDS COG3151 379858 380283 - [S] Uncharacterized protein conserved in bacteria nudF CDS COG0494 380317 380949 - [LR] NTP pyrophosphohydrolases including oxidative damage repair 180 tolC CDS ROG3774 381345 382742 + NA 181 cds-WP_002357252.1 CDS COG5463 383046 383729 + [S] Predicted integral membrane protein cds-WP_002212188.1 CDS COG0754 383739 384899 + [E] Glutathionylspermidine synthase 182 ygiD CDS COG3384 385183 385965 - [S] Uncharacterized conserved protein 183 ribB CDS COG0108 386424 387077 - [H] 3,4-dihydroxy-2-butanone 4-phosphate synthase 184 cds-WP_002212191.1 CDS COG2960 387646 387927 + [S] Uncharacterized protein conserved in bacteria 185 cds-A1122_RS23955 CDS NA 388140 388208 + NA 186 yjeH CDS COG0531 388252 389502 - [E] Amino acid transporters hldE CDS COG2870 389539 390969 - [M] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase glnE CDS COG1391 391104 393959 - [OT] Glutamine synthetase adenylyltransferase cds-WP_002212195.1 CDS COG3025 394130 395437 - [S] Uncharacterized conserved protein 187 cds-WP_002212196.1 CDS COG3103 395741 396364 + [T] SH3 domain protein 188 cds-WP_002212197.1 CDS COG0617 396524 397762 + [J] tRNA nucleotidyltransferase/poly(A) polymerase 189 bacA CDS COG1968 397998 398816 - [V] Uncharacterized bacitracin resistance protein 190 folB CDS COG1539 399090 399449 - [H] Dihydroneopterin aldolase 191 plsY CDS COG0344 399557 400207 + [S] Predicted membrane protein 192 tsaD CDS COG0533 400453 401466 - [O] Metal-dependent proteases with possible chaperone activity 193 rpsU CDS COG0828 401872 402087 + [J] Ribosomal protein S21 dnaG CDS COG0358 402223 403971 + [L] DNA primase (bacterial type) rpoD CDS COG0568 404129 405967 + [K] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 194 rna-A1122_RS01815 tRNA NA 406163 406239 + NA 195 cds-WP_002217368.1 CDS NA 406485 406823 - NA cds-WP_002217366.1 CDS COG3728 406801 407091 - [L] Phage terminase, small subunit cds-WP_002210360.1 CDS NA 407108 407563 - NA cds-WP_002210361.1 CDS NA 407590 408060 - NA cds-WP_002210362.1 CDS NA 408069 409451 - NA 196 istB_4 CDS COG1484 409577 410359 - [L] DNA replication protein istA_4 CDS COG4584 410356 411378 - [L] Transposase and inactivated derivatives 197 cds-WP_002214241.1 CDS NA 411543 411773 - NA 198 cds-WP_002210363.1 CDS NA 412329 412487 + NA 199 cds-WP_232781626.1 CDS COG2184 412484 412684 - [D] Protein involved in cell division cds-WP_002214235.1 CDS COG2184 412792 413055 - [D] Protein involved in cell division 200 cds-A1122_RS24160 CDS NA 413321 413421 - NA cds-WP_002210366.1 CDS COG0583 413446 414378 - [K] Transcriptional regulator 201 cds-WP_002210367.1 CDS COG3531 414540 415256 + [O] Predicted protein-disulfide isomerase 202 cds-WP_002210368.1 CDS ROG2175 415516 415818 + NA 203 cds-WP_002210369.1 CDS COG0251 416033 416437 - [J] Putative translation initiation inhibitor, yjgF family cds-WP_002210370.1 CDS COG0251 416722 417102 - [J] Putative translation initiation inhibitor, yjgF family cds-WP_223871901.1 CDS COG2964 417113 417160 - [S] Uncharacterized protein conserved in bacteria cds-A1122_RS24170 CDS COG2964 417445 417744 - [S] Uncharacterized protein conserved in bacteria 204 cds-WP_002210371.1 CDS ROG0281 417878 418315 - NA cds-A1122_RS01915 CDS COG1757 418328 419041 - [C] Na+/H+ antiporter cds-A1122_RS01920 CDS COG0436 419040 419675 - [E] Aspartate/tyrosine/aromatic aminotransferase 205 cds-WP_002210374.1 CDS NA 420441 420641 + NA cds-WP_002214224.1 CDS NA 420638 420973 + NA mdtN CDS COG1566 420983 422032 + [V] Multidrug resistance efflux pump cds-WP_002210377.1 CDS COG1289 422016 423917 + [S] Predicted membrane protein cds-WP_002214220.1 CDS COG1538 423922 425448 + [MU] Outer membrane protein 206 cds-WP_002210379.1 CDS COG1472 425512 427695 - [G] Beta-glucosidase-related glycosidases cds-WP_002210380.1 CDS NA 427746 428261 - NA cds-WP_002210381.1 CDS COG0395 428258 429076 - [G] ABC-type sugar transport system, permease component cds-WP_002210382.1 CDS COG1175 429076 429957 - [G] ABC-type sugar transport systems, permease components cds-WP_002214214.1 CDS COG1653 430011 431255 - [G] ABC-type sugar transport system, periplasmic component cds-WP_002210384.1 CDS COG1609 431332 432318 - [K] Transcriptional regulators cds-WP_002214212.1 CDS COG3459 432427 435780 - [G] Cellobiose phosphorylase cds-WP_002353714.1 CDS COG3839 435863 436978 - [G] ABC-type sugar transport systems, ATPase components 207 cds-WP_002210387.1 CDS NA 437304 438683 + NA 208 cds-WP_002210388.1 CDS NA 438785 439780 + NA yapF CDS NA 439840 442125 + NA 209 cds-WP_002228290.1 CDS NA 442393 442557 - NA 210 cds-WP_227002847.1 CDS COG3210 442621 443256 - [U] Large exoproteins involved in heme utilization 211 cds-WP_002214951.1 CDS NA 443409 443825 - NA 212 cds-WP_002214949.1 CDS NA 443921 444148 - NA cds-WP_002214947.1 CDS NA 444203 444352 - NA cdiI CDS COG1284 444414 444647 - [S] Uncharacterized conserved protein cdiA CDS COG3210 444644 454531 - [U] Large exoproteins involved in heme utilization cds-WP_002210394.1 CDS COG2831 454576 456264 - [U] Hemolysin activation/secretion protein 213 cds-WP_002210395.1 CDS COG4245 456979 457617 + [R] Uncharacterized protein encoded in toxicity protection cds-WP_002210396.1 CDS COG2310 457650 458291 + [T] Uncharacterized proteins involved in stress response, cds-WP_002228094.1 CDS COG4245 458293 458931 + [R] Uncharacterized protein encoded in toxicity protection cds-A1122_RS02065 CDS COG4245 459033 460072 + [R] Uncharacterized protein encoded in toxicity protection cds-WP_002210398.1 CDS ROG2884 460072 461805 + NA cds-WP_002210399.1 CDS COG1062 461837 463336 + [C] Zn-dependent alcohol dehydrogenases, class III 214 cds-WP_002210400.1 CDS COG3247 463727 464296 + [S] Uncharacterized conserved protein 215 cds-WP_002210401.1 CDS COG1902 464509 466530 + [C] NADH:flavin oxidoreductases, Old Yellow Enzyme family 216 rlmG CDS COG2813 466646 467833 - [J] 16S RNA G1207 methylase RsmC 217 yapG CDS COG3468 468302 471286 + [MU] Type V secretory pathway, adhesin AidA 218 cds-WP_002210404.1 CDS COG1451 471525 472034 + [R] Predicted metal-dependent hydrolase 219 cds-WP_002210405.1 CDS COG0673 472237 473232 + [R] Predicted dehydrogenases and related proteins 220 sstT CDS COG3633 473767 475023 + [E] Na+/serine symporter 221 tnpA_6 CDS COG1943 475224 475682 + [L] Transposase and inactivated derivatives 222 cds-WP_002210407.1 CDS ROG3859 475800 476330 - NA 223 cds-WP_002210408.1 CDS COG2721 476483 477973 - [G] Altronate dehydratase cds-WP_002210409.1 CDS COG0246 477984 479435 - [G] Mannitol-1-phosphate/altronate dehydrogenases uxaC CDS COG1904 479634 481043 - [G] Glucuronate isomerase 224 cds-WP_002353699.1 CDS COG2271 481791 483092 + [G] Sugar phosphate permease 225 exuR CDS COG2186 483355 484149 + [K] Transcriptional regulators 226 cds-WP_002218957.1 CDS NA 484398 484931 + NA 227 cds-WP_002210414.1 CDS COG0586 485209 485907 + [S] Uncharacterized membrane-associated protein mzrA CDS NA 485904 486293 + NA 228 cds-WP_002210416.1 CDS ROG4156 486519 486899 + NA 229 cds-WP_002210418.1 CDS COG4575 487054 487359 + [S] Uncharacterized conserved protein cds-WP_002210419.1 CDS COG5393 487362 487757 + [S] Predicted membrane protein cds-WP_002210420.1 CDS NA 487754 488038 + NA 230 cds-WP_002210421.1 CDS COG2259 488342 488737 + [S] Predicted membrane protein cds-A1122_RS23510 CDS COG0435 488823 488927 + [O] Predicted glutathione S-transferase 231 istA_5 CDS COG4584 489016 490038 + [L] Transposase and inactivated derivatives istB_5 CDS COG1484 490035 490817 + [L] DNA replication protein 232 mutT CDS COG1194 491079 491465 - [L] A/G-specific DNA glycosylase 233 cds-A1122_RS23965 CDS NA 491643 491711 + NA 234 secA CDS COG0653 491760 494474 - [U] Preprotein translocase subunit SecA (ATPase, RNA 235 secM CDS NA 494552 495085 - NA 236 cds-WP_002210428.1 CDS COG4701 495114 495638 + [S] Uncharacterized protein conserved in bacteria 237 lpxC CDS COG0774 495805 496725 - [M] UDP-3-O-acyl-N-acetylglucosamine deacetylase ftsZ CDS COG0206 496825 497976 - [D] Cell division GTPase ftsA CDS COG0849 498049 499305 - [D] Actin-like ATPase involved in cell division ftsQ CDS COG1589 499332 500159 - [M] Cell division septal protein cds-WP_002210432.1 CDS COG1181 500161 501081 - [M] D-alanine-D-alanine ligase and related ATP-grasp enzymes murC CDS COG0773 501074 502549 - [M] UDP-N-acetylmuramate-alanine ligase murG CDS COG0707 502687 503757 - [M] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase ftsW CDS COG0772 503754 504956 - [D] Bacterial cell division membrane protein murD CDS COG0771 504956 506272 - [M] UDP-N-acetylmuramoylalanine-D-glutamate ligase mraY CDS COG0472 506275 507357 - [M] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase murF CDS COG0770 507351 508727 - [M] UDP-N-acetylmuramyl pentapeptide synthase murE CDS COG0769 508724 510211 - [M] UDP-N-acetylmuramyl tripeptide synthase cds-WP_002210440.1 CDS COG0768 510198 511961 - [M] Cell division protein FtsI/penicillin-binding protein 2 ftsL CDS COG3116 512027 512344 - [D] Cell division protein rsmH CDS COG0275 512341 513303 - [M] Predicted S-adenosylmethionine-dependent methyltransferase involved in cell mraZ CDS COG2001 513306 513764 - [S] Uncharacterized protein conserved in bacteria 238 cds-A1122_RS23520 CDS NA 514340 514408 - NA 239 cds-WP_002210446.1 CDS NA 514866 515306 + NA 240 cra CDS COG1609 515437 516447 - [K] Transcriptional regulators 241 tnpA_7 CDS COG1943 516952 517410 - [L] Transposase and inactivated derivatives 242 ilvN CDS COG0440 517609 518103 - [E] Acetolactate synthase, small (regulatory) subunit ilvI CDS COG0028 518106 519833 - [EH] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate 243 cds-WP_002216437.1 CDS COG1022 520293 522098 - [I] Long-chain acyl-CoA synthetases (AMP-forming) 244 leuO CDS COG0583 522635 523591 - [K] Transcriptional regulator 245 cds-WP_002210452.1 CDS NA 524269 524484 + NA 246 tnpA_8 CDS COG1943 524913 525371 + [L] Transposase and inactivated derivatives 247 leuA CDS COG0119 525518 527080 + [E] Isopropylmalate/homocitrate/citramalate synthases leuB CDS COG0473 527083 528174 + [CE] Isocitrate/isopropylmalate dehydrogenase leuC CDS COG0065 528176 529606 + [E] 3-isopropylmalate dehydratase large subunit leuD CDS COG0066 529621 530223 + [E] 3-isopropylmalate dehydratase small subunit 248 cds-A1122_RS02405 CDS NA 530464 530715 - NA 249 istA_6 CDS COG4584 530803 531825 + [L] Transposase and inactivated derivatives istB_6 CDS COG1484 531822 532604 + [L] DNA replication protein 250 cds-A1122_RS02420 CDS COG2211 532672 533604 - [G] Na+/melibiose symporter and related transporters 251 sgrR CDS COG4533 534268 535929 + [R] ABC-type uncharacterized transport system, periplasmic component 252 cds-WP_002214269.1 CDS NA 536030 536314 - NA 253 thiB CDS COG4143 536869 537861 + [H] ABC-type thiamine transport system, periplasmic component thiP CDS COG1178 537837 539444 + [P] ABC-type Fe3+ transport system, permease component thiQ CDS COG3840 539431 540141 + [H] ABC-type thiamine transport system, ATPase component 254 cds-WP_002210465.1 CDS COG0586 540210 540977 - [S] Uncharacterized membrane-associated protein 255 cds-WP_002210466.1 CDS COG0417 541173 543542 + [L] DNA polymerase elongation subunit (family B) 256 rapA CDS COG0553 544003 546909 + [KL] Superfamily II DNA/RNA helicases, SNF2 family 257 cds-A1122_RS24180 CDS NA 546953 547021 - NA 258 cds-WP_002210468.1 CDS NA 547165 547518 - NA tssM CDS COG3523 547540 550980 - [S] Uncharacterized protein conserved in bacteria icmH CDS COG3455 551042 552652 - [S] Uncharacterized protein conserved in bacteria tssK_2 CDS COG3522 552649 554004 - [S] Uncharacterized protein conserved in bacteria tssJ CDS COG3521 554124 554615 - [S] Uncharacterized protein conserved in bacteria cds-WP_002214737.1 CDS ROG1368 554608 554973 - NA cds-WP_002210473.1 CDS NA 554979 555596 - NA cds-WP_002214739.1 CDS COG1357 555589 556692 - [S] Uncharacterized low-complexity proteins cds-WP_337459502.1 CDS COG1357 556718 558100 - [S] Uncharacterized low-complexity proteins cds-A1122_RS24185 CDS COG5351 558143 558937 - [S] Uncharacterized protein conserved in bacteria vgrG_2 CDS COG3501 558950 561298 - [S] Uncharacterized protein conserved in bacteria tssH_2 CDS COG0542 561402 563990 - [O] ATPases with chaperone activity, ATP-binding subunit tssG CDS COG3520 564008 564991 - [S] Uncharacterized protein conserved in bacteria tssF CDS COG3519 564984 566828 - [S] Uncharacterized protein conserved in bacteria cds-WP_002210478.1 CDS COG3518 566861 567304 - [S] Uncharacterized protein conserved in bacteria cds-WP_002210479.1 CDS COG3157 567378 567896 - [S] Hemolysin-coregulated protein (uncharacterized) tssC_2 CDS COG3517 568059 569561 - [S] Uncharacterized protein conserved in bacteria tssB_2 CDS COG3516 569570 570130 - [S] Uncharacterized protein conserved in bacteria cds-WP_002210482.1 CDS COG3515 570141 571154 - [S] Uncharacterized protein conserved in bacteria 259 rovC CDS COG5419 571484 572227 + [S] Uncharacterized conserved protein 260 rluA CDS COG0564 573450 574070 + [J] Pseudouridylate synthases, 23S RNA-specific 261 djlA CDS COG1076 574368 575201 - [O] DnaJ-domain-containing proteins 1 262 lptD CDS COG1452 575386 577728 + [M] Organic solvent tolerance protein OstA surA CDS COG0760 577796 579100 + [O] Parvulin-like peptidyl-prolyl isomerase pdxA CDS COG1995 579084 580079 + [H] Pyridoxal phosphate biosynthesis protein rsmA CDS COG0030 580072 580890 + [J] Dimethyladenosine transferase (rRNA methylation) apaG CDS COG2967 580904 581281 + [P] Uncharacterized protein affecting Mg2+/Co2+ transport apaH CDS COG1408 581298 582167 + [R] Predicted phosphohydrolases 263 cds-WP_002210493.1 CDS NA 582257 582721 - NA 264 cds-WP_071525509.1 CDS NA 582848 583162 - NA 265 tnpA_9 CDS COG1943 583604 584062 - [L] Transposase and inactivated derivatives 266 folA CDS COG0262 584274 584756 - [H] Dihydrofolate reductase 267 cds-WP_002210498.1 CDS COG3610 584906 585361 - [S] Uncharacterized conserved protein cds-WP_002210499.1 CDS COG2966 585358 586158 - [S] Uncharacterized conserved protein 268 cds-WP_002210501.1 CDS COG1280 586482 587096 + [E] Putative threonine efflux protein 269 carB CDS COG0458 587324 590557 - [EF] Carbamoylphosphate synthase large subunit (split gene carA CDS COG0505 590573 591748 - [EF] Carbamoylphosphate synthase small subunit 270 dapB CDS COG0289 592221 593042 - [E] Dihydrodipicolinate reductase 271 tnpA_10 CDS COG1943 593495 593953 - [L] Transposase and inactivated derivatives 272 ispH CDS COG0761 594335 595288 - [IM] Penicillin tolerance protein fkpB CDS COG1047 595269 595727 - [O] FKBP-type peptidyl-prolyl cis-trans isomerases 2 lspA CDS COG0597 595795 596304 - [MU] Lipoprotein signal peptidase ileS CDS COG0060 596304 599120 - [J] Isoleucyl-tRNA synthetase ribF CDS COG0196 599152 600090 - [H] FAD synthase 273 rpsT CDS COG0268 600505 600768 + [J] Ribosomal protein S20 274 nhaR CDS COG0583 600899 601798 - [K] Transcriptional regulator 275 nhaA CDS COG3004 601928 603112 - [P] Na+/H+ antiporter 276 dnaJ CDS COG0484 603355 604494 - [O] DnaJ-class molecular chaperone with C-terminal Zn dnaK CDS COG0443 604606 606516 - [O] Molecular chaperone 277 satP CDS COG1584 606890 607501 + [S] Predicted membrane protein 278 cds-WP_002209245.1 CDS ROG7133 607790 610237 + NA 279 cds-WP_002209244.1 CDS COG0477 610307 611695 - [GEPR] Permeases of the major facilitator superfamily 280 mog CDS COG0521 611823 612410 - [H] Molybdopterin biosynthesis enzymes 281 tal CDS COG0176 612698 613651 - [G] Transaldolase 282 cds-WP_002216008.1 CDS NA 613718 613900 - NA 283 yaaA CDS COG3022 614183 614959 + [S] Uncharacterized protein conserved in bacteria 284 thrC CDS COG0498 615776 617065 - [E] Threonine synthase thrB CDS COG0083 617069 617998 - [E] Homoserine kinase thrA CDS COG0527 618001 620460 - [E] Aspartokinases 285 thrL CDS NA 620579 620665 - NA 286 cds-WP_002231506.1 CDS NA 621321 621461 - NA 287 arcA CDS COG0745 621564 622280 + [TK] Response regulators consisting of a CheY-like 288 creA CDS COG3045 622454 622921 - [S] Uncharacterized protein conserved in bacteria 289 robA CDS COG2207 623147 624013 + [K] AraC-type DNA-binding domain-containing proteins 290 gpmB CDS COG0406 624010 624657 - [G] Fructose-2,6-bisphosphatase 291 yjjX CDS COG1986 624751 625293 + [S] Uncharacterized conserved protein 292 trpR CDS COG2973 625290 625682 - [K] Trp operon repressor 293 sltY CDS COG0741 625918 627837 - [M] Soluble lytic murein transglycosylase and related 294 cds-WP_002209226.1 CDS COG0474 628407 631133 + [P] Cation transport ATPase 295 cds-WP_002209225.1 CDS ROG7826 631508 632131 + NA cds-WP_002209224.1 CDS COG2199 632128 633429 + [T] FOG: GGDEF domain cds-WP_002215967.1 CDS COG2885 633435 633941 + [M] Outer membrane protein and related peptidoglycan-associated 296 ettA CDS COG0488 634124 635787 + [R] ATPase components of ABC transporters with 297 cds-WP_002218755.1 CDS COG3177 635933 637063 - [S] Uncharacterized conserved protein 298 nadR CDS COG3172 637220 638491 - [H] Predicted ATPase/kinase involved in NAD metabolism 299 radA CDS COG1066 638650 640032 - [O] Predicted ATP-dependent serine protease serB CDS COG0560 640120 641100 - [E] Phosphoserine phosphatase 300 cds-WP_002209218.1 CDS COG3726 641332 642033 + [R] Uncharacterized membrane protein affecting hemolysin expression 301 deoD CDS COG0813 642145 642864 - [F] Purine-nucleoside phosphorylase deoB CDS COG1015 642989 644212 - [G] Phosphopentomutase 302 cds-A1122_RS02875 CDS NA 644344 645278 - NA 303 istB_7 CDS COG1484 645345 646127 - [L] DNA replication protein istA_7 CDS COG4584 646124 647146 - [L] Transposase and inactivated derivatives 304 cds-A1122_RS02890 CDS COG0213 647232 647714 - [F] Thymidine phosphorylase deoC CDS COG0274 647742 648539 - [F] Deoxyribose-phosphate aldolase 305 cds-WP_002209214.1 CDS COG1972 649115 650386 - [F] Nucleoside permease 306 cds-WP_002228116.1 CDS COG0084 650921 651709 - [L] Mg-dependent DNase cds-WP_002216076.1 CDS COG4667 651746 653017 - [R] Predicted esterase of the alpha-beta hydrolase 307 cds-WP_002209211.1 CDS COG5487 653091 653252 - [S] Small integral membrane protein 308 osmY CDS COG2823 653419 654033 - [R] Predicted periplasmic or secreted lipoprotein 309 prfC CDS COG4108 654360 655949 - [J] Peptide chain release factor RF-3 310 rimI CDS COG0456 656128 656571 - [R] Acetyltransferases cds-WP_002209207.1 CDS COG3050 656516 656953 - [L] DNA polymerase III, psi subunit 311 rsmC CDS COG2813 657066 658109 + [J] 16S RNA G1207 methylase RsmC 312 rna-A1122_RS02945 tRNA NA 658366 658452 + NA 313 cds-WP_002215232.1 CDS NA 658622 658954 - NA 314 cds-WP_002209204.1 CDS COG3706 659203 660375 + [T] Response regulator containing a CheY-like receiver 315 cds-WP_002209202.1 CDS COG4677 660916 662001 - [G] Pectin methylesterase 316 cds-WP_002215230.1 CDS NA 662319 662657 + NA 317 cds-WP_002209201.1 CDS NA 662840 663136 + NA 318 cds-WP_002209200.1 CDS COG3696 663497 666583 - [P] Putative silver efflux pump cds-WP_002209199.1 CDS COG1566 666583 667665 - [V] Multidrug resistance efflux pump cds-WP_002209198.1 CDS ROG8137 667717 667950 - NA 319 cds-WP_002209197.1 CDS COG3307 668760 669992 - [M] Lipid A core - O-antigen ligase rfaQ CDS COG0859 670040 671203 - [M] ADP-heptose:LPS heptosyltransferase 320 lsrK CDS COG1070 671549 673141 - [G] Sugar (pentulose and hexulose) kinases lsrR CDS COG2390 673312 674299 - [K] Transcriptional regulator, contains sigma factor-related N-terminal 321 cds-WP_002221620.1 CDS NA 674328 674534 + NA 322 lsrA CDS COG1129 674644 676227 + [G] ABC-type sugar transport system, ATPase component lsrC CDS COG1172 676221 677276 + [G] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components lsrD CDS COG1172 677273 678274 + [G] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components lsrB CDS COG1879 678340 679359 + [G] ABC-type sugar transport system, periplasmic component lsrF CDS COG1830 679415 680290 + [G] DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes lsrG CDS COG1359 680354 680644 + [S] Uncharacterized conserved protein 323 cds-WP_002209184.1 CDS ROG6913 680945 681436 + NA 324 ptsP_2 CDS COG1080 681498 684056 - [G] Phosphoenolpyruvate-protein kinase (PTS system EI component 325 cds-WP_002209182.1 CDS COG1299 684421 685503 + [G] Phosphotransferase system, fructose-specific IIC component cds-WP_002209181.1 CDS COG1445 685844 686164 + [G] Phosphotransferase system fructose-specific component IIB cds-WP_002209180.1 CDS COG1445 686257 686601 + [G] Phosphotransferase system fructose-specific component IIB 326 cds-WP_002209179.1 CDS COG2207 686594 687469 - [K] AraC-type DNA-binding domain-containing proteins cds-WP_002209178.1 CDS NA 687471 688007 - NA 327 cds-WP_002209177.1 CDS COG4269 688713 689909 + [S] Predicted membrane protein cds-WP_002209176.1 CDS COG4784 689920 690966 + [R] Putative Zn-dependent protease 328 cds-WP_002209174.1 CDS COG4924 691112 692266 - [S] Uncharacterized protein conserved in bacteria cds-WP_002228121.1 CDS COG4913 692263 693675 - [S] Uncharacterized protein conserved in bacteria 329 cds-WP_002209172.1 CDS NA 693893 694090 + NA 330 cds-WP_307970583.1 CDS COG3520 694280 694579 + [S] Uncharacterized protein conserved in bacteria 331 cds-WP_002209171.1 CDS NA 694923 696296 - NA cds-WP_002209170.1 CDS ROG2190 696268 696990 - NA cds-WP_002209169.1 CDS COG0863 697040 698365 - [L] DNA modification methylase 332 cds-A1122_RS23530 CDS ROG6591 698504 698954 + NA 333 cds-WP_002209167.1 CDS COG4268 699389 700705 - [V] McrBC 5-methylcytosine restriction system component cds-WP_002209166.1 CDS COG1401 700702 702765 - [V] GTPase subunit of restriction endonuclease 334 istA_8 CDS COG4584 702899 703921 + [L] Transposase and inactivated derivatives istB_8 CDS COG1484 703918 704700 + [L] DNA replication protein 335 bsmA CDS NA 705112 705351 + NA 336 cds-WP_002353634.1 CDS COG1960 705423 707054 - [I] Acyl-CoA dehydrogenases 337 rlmB CDS COG0566 707474 708214 - [J] rRNA methylases rnr CDS COG0557 708333 710867 - [K] Exoribonuclease R 338 nsrR CDS COG1959 711108 711533 - [K] Predicted transcriptional regulator 339 cds-WP_002209157.1 CDS COG0104 711902 713200 - [F] Adenylosuccinate synthase 340 cds-WP_002217227.1 CDS COG3242 713300 713500 - [S] Uncharacterized protein conserved in bacteria 341 hflC CDS COG0330 713672 714676 - [O] Membrane protease subunits, stomatin/prohibitin homologs hflK CDS COG0330 714680 715939 - [O] Membrane protease subunits, stomatin/prohibitin homologs 342 hflX CDS COG2262 716180 717466 - [R] GTPases hfq CDS COG1923 717565 717870 - [R] Uncharacterized host factor I protein miaA CDS COG0324 717986 718927 - [J] tRNA delta(2)-isopentenylpyrophosphate transferase mutL CDS COG0323 718920 720827 - [L] DNA mismatch repair enzyme (predicted ATPase) amiB CDS COG0860 720843 722756 - [M] N-acetylmuramoyl-L-alanine amidase tsaE CDS COG0802 722764 723234 - [R] Predicted ATPase or kinase nnr CDS COG0063 723245 724759 - [G] Predicted sugar kinase 343 queG CDS COG1600 724758 725993 + [C] Uncharacterized Fe-S protein 344 rna-A1122_RS03265 tRNA NA 726305 726380 - NA 345 orn CDS COG1949 726938 727483 - [A] Oligoribonuclease (3'->5' exoribonuclease) 346 rsgA CDS COG1162 727683 728735 + [R] Predicted GTPases 347 asd CDS COG0688 729060 729941 + [I] Phosphatidylserine decarboxylase mscM CDS COG3264 729983 733324 + [M] Small-conductance mechanosensitive channel 348 epmA CDS COG2269 733445 734422 - [J] Truncated, possibly inactive, lysyl-tRNA synthetase (class 349 cds-WP_002209138.1 CDS NA 734582 734773 - NA 350 frdA CDS COG1053 734880 736703 + [C] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit cds-WP_002209136.1 CDS COG0479 736696 737430 + [C] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit frdC CDS COG3029 737447 737839 + [C] Fumarate reductase subunit C frdD CDS COG3080 737856 738212 + [C] Fumarate reductase subunit D 351 tnpA_11 CDS COG1943 738410 738868 + [L] Transposase and inactivated derivatives 352 sugE CDS COG2076 739087 739401 - [P] Membrane transporters of cations and cationic 353 efp CDS COG0231 739648 740214 - [J] Translation elongation factor P (EF-P)/translation initiation 354 epmB CDS COG1509 740250 741278 + [E] Lysine 2,3-aminomutase 355 cds-WP_032465615.1 CDS ROG5059 741563 741907 - NA 356 groL CDS COG0459 742585 744231 - [O] Chaperonin GroEL (HSP60 family) cds-WP_002209127.1 CDS COG0234 744278 744571 - [O] Co-chaperonin GroES (HSP10) 357 cds-WP_002209126.1 CDS COG3030 744826 745404 - [R] Protein affecting phage T7 exclusion by 358 aspA CDS COG1027 745852 747288 + [E] Aspartate ammonia-lyase cds-WP_002209123.1 CDS COG2704 747408 748709 + [R] Anaerobic C4-dicarboxylate transporter 359 cutA CDS COG1324 748894 749253 + [P] Uncharacterized protein involved in tolerance to cds-WP_002209121.1 CDS COG4232 749229 751016 + [OC] Thiol:disulfide interchange protein 360 fdhF CDS COG0243 751078 753225 - [C] Anaerobic dehydrogenases, typically selenocysteine-containing cds-WP_002209119.1 CDS COG1142 753248 753805 - [C] Fe-S-cluster-containing hydrogenase components 2 aegA CDS COG0493 753828 755843 - [ER] NADPH-dependent glutamate synthase beta chain and 361 cds-WP_002216121.1 CDS NA 756046 756231 - NA 362 cds-WP_002209117.1 CDS ROG6516 756263 756838 + NA 363 rna-A1122_RS03415 tRNA NA 756983 757058 + NA 364 cds-WP_002209115.1 CDS NA 757492 760047 - NA 365 cds-WP_002209112.1 CDS NA 760474 760899 + NA 366 cds-A1122_RS22010 CDS COG1662 761025 761318 - [L] Transposase and inactivated derivatives, IS1 family 367 rhaT CDS NA 761755 762789 + NA 368 rhaR CDS COG2207 762938 763810 - [K] AraC-type DNA-binding domain-containing proteins rhaS CDS COG2207 763943 764764 - [K] AraC-type DNA-binding domain-containing proteins 369 cds-WP_002209106.1 CDS NA 764986 765192 - NA 370 rhaB CDS COG1070 765191 766648 + [G] Sugar (pentulose and hexulose) kinases cds-WP_002209104.1 CDS COG4806 766645 767901 + [G] L-rhamnose isomerase rhaD CDS COG0235 767914 768738 + [G] Ribulose-5-phosphate 4-epimerase and related epimerases and fucO CDS COG1454 768805 769953 + [C] Alcohol dehydrogenase, class IV rhaM CDS COG3254 769967 770281 + [S] Uncharacterized conserved protein 371 ssb1 CDS COG0629 770528 771076 - [L] Single-stranded DNA-binding protein 372 uvrA CDS COG0178 771534 774377 + [L] Excinuclease ATPase subunit 373 cds-WP_002209098.1 CDS COG2315 774470 774829 - [S] Uncharacterized protein conserved in bacteria 374 cds-WP_002209097.1 CDS COG1448 775356 776549 - [E] Aspartate/tyrosine/aromatic aminotransferase 375 alr CDS COG0787 776735 777814 - [M] Alanine racemase dnaB CDS COG0305 777911 779317 - [L] Replicative DNA helicase 376 cds-WP_002209094.1 CDS COG0604 779649 780632 + [CR] NADPH:quinone reductase and related Zn-dependent oxidoreductases 377 pspG CDS NA 780977 781195 - NA 378 dusA CDS COG0042 781711 782748 - [J] tRNA-dihydrouridine synthase 379 zur CDS COG0735 783003 783512 + [P] Fe2+/Zn2+ uptake regulation proteins 380 lexA CDS COG1974 783672 784280 - [KT] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 381 cds-WP_002209089.1 CDS COG0818 784405 784776 - [M] Diacylglycerol kinase 382 plsB CDS COG2937 784904 787381 + [I] Glycerol-3-phosphate O-acyltransferase 383 ubiA CDS COG0382 787562 788428 - [H] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases ubiC CDS COG3161 788594 789118 - [H] 4-hydroxybenzoate synthetase (chorismate lyase) 384 yapK CDS COG3468 790043 793759 + [MU] Type V secretory pathway, adhesin AidA 385 cds-WP_002209085.1 CDS COG3979 794103 796160 - [R] Uncharacterized protein contain chitin-binding domain type 386 cds-WP_002214633.1 CDS ROG8537 797169 798488 - NA 387 cds-A1122_RS24605 CDS COG3516 798703 798786 - [S] Uncharacterized protein conserved in bacteria 388 cds-WP_002214631.1 CDS NA 799681 799935 - NA cds-WP_002209082.1 CDS COG3121 799946 800689 - [NU] P pilus assembly protein, chaperone PapD cds-WP_002209081.1 CDS COG3188 800761 803139 - [NU] P pilus assembly protein, porin PapC 389 cds-WP_002209080.1 CDS NA 803390 804028 - NA 390 cds-WP_002209079.1 CDS COG2310 804741 805316 - [T] Uncharacterized proteins involved in stress response, cds-WP_002209078.1 CDS COG2310 805500 806078 - [T] Uncharacterized proteins involved in stress response, cds-WP_002209077.1 CDS COG0861 806142 807179 - [P] Membrane protein TerC, possibly involved in cds-WP_002209076.1 CDS COG3793 807201 807656 - [P] Tellurite resistance protein cds-WP_002209075.1 CDS COG4110 807689 808873 - [R] Uncharacterized protein involved in stress response cds-WP_002228131.1 CDS COG2310 808873 809466 - [T] Uncharacterized proteins involved in stress response, 391 cds-WP_002209073.1 CDS ROG4800 809742 810803 + NA cds-WP_002209072.1 CDS ROG0056 810815 811951 + NA cds-WP_002209071.1 CDS ROG0556 811944 812756 + NA cds-WP_002209070.1 CDS ROG0056 812749 813828 + NA cds-WP_002209069.1 CDS COG2301 813828 814787 + [G] Citrate lyase beta subunit 392 cds-WP_002209068.1 CDS COG1386 815184 815672 + [K] Predicted transcriptional regulator containing the HTH 393 cds-WP_002209067.1 CDS COG0685 815987 816787 + [E] 5,10-methylenetetrahydrofolate reductase 394 hutW CDS COG0635 817128 818441 + [H] Coproporphyrinogen III oxidase and related Fe-S hutX CDS COG3721 818474 818983 + [P] Putative heme iron utilization protein cds-WP_002209064.1 CDS COG0702 819017 819667 + [MG] Predicted nucleoside-diphosphate-sugar epimerases 395 cds-A1122_RS24610 CDS NA 819753 819952 + NA 396 cds-WP_002209062.1 CDS COG1629 820082 822112 + [P] Outer membrane receptor proteins, mostly Fe cds-WP_002209061.1 CDS COG3720 822231 823268 + [P] Putative heme degradation protein cds-WP_002209060.1 CDS COG4558 823265 824104 + [P] ABC-type hemin transport system, periplasmic component cds-WP_002209059.1 CDS COG0609 824101 825105 + [P] ABC-type Fe3+-siderophore transport system, permease component cds-WP_002209058.1 CDS COG4559 825098 825898 + [P] ABC-type hemin transport system, ATPase component 397 metC_2 CDS COG0626 826039 827220 - [E] Cystathionine beta-lyases/cystathionine gamma-synthases cds-WP_002209057.1 CDS COG0814 827266 828552 - [E] Amino acid permeases 398 cds-WP_002209056.1 CDS COG0583 828722 829705 + [K] Transcriptional regulator 399 yedF CDS COG0425 829783 830052 - [O] Predicted redox protein, regulator of disulfide yedE CDS COG2391 830049 831263 - [R] Predicted transporter component 400 cds-A1122_RS24205 CDS NA 831356 831427 - NA 401 cds-WP_002209053.1 CDS COG4792 831646 832713 - [U] Type III secretory pathway, component EscU sctT CDS COG4791 832703 833497 - [U] Type III secretory pathway, component EscT cds-WP_002209051.1 CDS COG4794 833499 833792 - [U] Type III secretory pathway, component EscS sctR CDS COG4790 833789 834439 - [U] Type III secretory pathway, component EscR cds-WP_002209049.1 CDS COG1886 834566 835528 - [NU] Flagellar motor switch/type III secretory pathway cds-WP_002218091.1 CDS COG0156 835506 835904 - [H] 7-keto-8-aminopelargonate synthetase and related enzymes cds-WP_002209047.1 CDS NA 835885 836286 - NA cds-WP_002209046.1 CDS COG1157 836283 837620 - [NU] Flagellar biosynthesis/type III secretory pathway ATPase cds-WP_002209045.1 CDS COG4789 837607 839655 - [U] Type III secretory pathway, component EscV sctL CDS COG1317 839648 840295 - [NU] Flagellar biosynthesis/type III secretory pathway protein cds-WP_002209043.1 CDS NA 840292 840885 - NA 402 ssaJ CDS COG4669 841060 841791 - [U] Type III secretory pathway, lipoprotein EscJ sctI CDS NA 841788 842039 - NA 403 cds-WP_002209040.1 CDS NA 842137 842385 - NA sctF CDS NA 842382 842597 - NA cds-A1122_RS03810 CDS NA 842607 843294 - NA 404 cds-WP_002209038.1 CDS NA 843401 843622 - NA sctD CDS ROG8041 843641 844855 - NA cds-WP_002353603.1 CDS COG1450 844857 846356 - [NU] Type II secretory pathway, component PulD 405 cds-WP_002209035.1 CDS COG0642 846600 849419 + [T] Signal transduction histidine kinase cds-WP_002209034.1 CDS COG2197 849432 850064 + [TK] Response regulator containing a CheY-like receiver 406 gltP CDS COG1301 850242 851558 - [C] Na+/H+-dicarboxylate symporters 407 acs CDS COG0365 852413 854371 + [I] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases cds-WP_002209030.1 CDS COG3162 854428 854739 + [S] Predicted membrane protein actP CDS COG4147 854736 856391 + [R] Predicted symporter 408 cds-WP_002209028.1 CDS COG1073 856465 857451 - [R] Hydrolases of the alpha/beta superfamily 409 istA_9 CDS COG4584 857510 858532 + [L] Transposase and inactivated derivatives istB_9 CDS COG1484 858529 859311 + [L] DNA replication protein 410 cds-WP_002215709.1 CDS COG0663 859423 859908 + [R] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 411 aroE CDS COG0169 859963 860784 - [E] Shikimate 5-dehydrogenase tsaC CDS COG0009 860793 861365 - [J] Putative translation factor (SUA5) cds-WP_002228134.1 CDS COG0551 861367 861906 - [L] Zn-finger domain associated with topoisomerase type cds-WP_002209023.1 CDS COG2922 861947 862420 - [S] Uncharacterized protein conserved in bacteria dprA CDS COG0758 862392 863513 - [LU] Predicted Rossmann fold nucleotide-binding protein involved 412 def CDS COG0242 863648 864160 + [J] N-formylmethionyl-tRNA deformylase fmt CDS COG0223 864185 865132 + [J] Methionyl-tRNA formyltransferase rsmB CDS COG0144 865226 866515 + [J] tRNA and rRNA cytosine-C5-methylases trkA CDS COG0569 866571 867947 + [P] K+ transport systems, NAD-binding component 413 mscL CDS COG1970 868086 868499 + [M] Large-conductance mechanosensitive channel 414 cds-WP_002209016.1 CDS COG3036 868609 868809 - [S] Uncharacterized protein conserved in bacteria 415 zntR CDS COG0789 868897 869322 - [K] Predicted transcriptional regulators 416 rplQ CDS COG0203 869769 870158 - [J] Ribosomal protein L17 rpoA CDS COG0202 870199 871188 - [K] DNA-directed RNA polymerase, alpha subunit/40 kD rpsD CDS COG0522 871214 871834 - [J] Ribosomal protein S4 and related proteins rpsK CDS COG0100 871865 872254 - [J] Ribosomal protein S11 rpsM CDS COG0099 872271 872627 - [J] Ribosomal protein S13 rpmJ CDS COG0257 872775 872891 - [J] Ribosomal protein L36 secY CDS COG0201 872925 874256 - [U] Preprotein translocase subunit SecY rplO CDS COG0200 874264 874698 - [J] Ribosomal protein L15 rpmD CDS COG1841 874702 874881 - [J] Ribosomal protein L30/L7E rpsE CDS COG0098 874884 875387 - [J] Ribosomal protein S5 rplR CDS COG0256 875402 875755 - [J] Ribosomal protein L18 rplF CDS COG0097 875765 876298 - [J] Ribosomal protein L6P/L9E rpsH CDS COG0096 876313 876705 - [J] Ribosomal protein S8 rpsN CDS COG0199 876739 877044 - [J] Ribosomal protein S14 rplE CDS COG0094 877058 877597 - [J] Ribosomal protein L5 rplX CDS COG0198 877612 877926 - [J] Ribosomal protein L24 rplN CDS COG0093 877937 878308 - [J] Ribosomal protein L14 rpsQ CDS COG0186 878489 878743 - [J] Ribosomal protein S17 rpmC CDS COG0255 878743 878934 - [J] Ribosomal protein L29 rplP CDS COG0197 878934 879344 - [J] Ribosomal protein L16/L10E rpsC CDS COG0092 879357 880055 - [J] Ribosomal protein S3 rplV CDS COG0091 880073 880405 - [J] Ribosomal protein L22 rpsS CDS COG0185 880420 880698 - [J] Ribosomal protein S19 rplB CDS COG0090 880713 881537 - [J] Ribosomal protein L2 rplW CDS COG0089 881554 881856 - [J] Ribosomal protein L23 rplD CDS COG0088 881853 882458 - [J] Ribosomal protein L4 rplC CDS COG0087 882475 883104 - [J] Ribosomal protein L3 rpsJ CDS COG0051 883137 883448 - [J] Ribosomal protein S10 417 bfr CDS COG2193 883862 884335 - [P] Bacterioferritin (cytochrome b1) bfd CDS COG2906 884414 884608 - [P] Bacterioferritin-associated ferredoxin 418 tnpA_12 CDS COG1943 884796 885254 - [L] Transposase and inactivated derivatives 419 tuf CDS COG0050 885457 886641 - [J] GTPases - translation elongation factors fusA CDS COG0480 886714 888822 - [J] Translation elongation factors (GTPases) rpsG CDS COG0049 888916 889386 - [J] Ribosomal protein S7 rpsL CDS COG0048 889483 889857 - [J] Ribosomal protein S12 420 tusB CDS COG2168 889995 890282 - [P] Uncharacterized conserved protein involved in oxidation tusC CDS COG2923 890302 890667 - [P] Uncharacterized protein involved in the oxidation tusD CDS COG1553 890667 891062 - [P] Uncharacterized conserved protein involved in intracellular cds-WP_002212319.1 CDS COG2964 891062 891784 - [S] Uncharacterized protein conserved in bacteria 421 fkpA CDS COG0545 892038 892838 - [O] FKBP-type peptidyl-prolyl cis-trans isomerases 1 422 cds-WP_002212317.1 CDS COG2900 893153 893371 + [S] Uncharacterized protein conserved in bacteria 423 slyD CDS COG1047 893592 894179 - [O] FKBP-type peptidyl-prolyl cis-trans isomerases 2 424 cds-WP_002212315.1 CDS COG3529 894274 894495 - [R] Predicted nucleic-acid-binding protein containing a Zn-ribbon kefB CDS COG0475 894511 896319 - [P] Kef-type K+ transport systems, membrane components kefG CDS COG2249 896323 896871 - [R] Putative NADPH-quinone reductase (modulator of drug 425 cds-A1122_RS04165 CDS COG0488 897122 899040 + [R] ATPase components of ABC transporters with 426 cds-WP_002212312.1 CDS COG0463 899175 900164 + [M] Glycosyltransferases involved in cell wall biogenesis cds-WP_002212311.1 CDS COG0859 900257 901237 + [M] ADP-heptose:LPS heptosyltransferase 427 tauD CDS COG2175 901250 902098 - [Q] Probable taurine catabolism dioxygenase tauC CDS COG0600 902095 902949 - [P] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component tauB CDS COG4525 902946 903713 - [P] ABC-type taurine transport system, ATPase component tauA CDS COG4521 903722 904711 - [P] ABC-type taurine transport system, periplasmic component 428 cds-WP_002212303.1 CDS COG1280 904986 905588 - [E] Putative threonine efflux protein 429 cds-WP_002212302.1 CDS COG0429 905690 906670 + [R] Predicted hydrolase of the alpha/beta-hydrolase fold cds-WP_002212301.1 CDS COG3089 906667 906903 + [S] Uncharacterized protein conserved in bacteria 430 cds-WP_002212300.1 CDS COG3954 907052 907921 + [C] Phosphoribulokinase 431 cds-WP_002228139.1 CDS NA 908099 908530 - NA 432 cds-WP_002212298.1 CDS COG1765 908602 909009 - [O] Predicted redox protein, regulator of disulfide 433 crp CDS COG0664 909345 909977 + [T] cAMP-binding proteins - catabolite gene activator 434 cds-WP_002212296.1 CDS COG1289 910063 912183 + [S] Predicted membrane protein 435 cds-WP_002212295.1 CDS COG4992 912409 913626 - [E] Ornithine/acetylornithine aminotransferase cds-WP_002212294.1 CDS COG0512 913759 914334 - [EH] Anthranilate/para-aminobenzoate synthases component II 436 cds-WP_002215686.1 CDS COG0433 914577 916118 - [R] Predicted ATPase 437 ppiA CDS COG0652 916444 917013 - [O] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin 438 cds-WP_002208880.1 CDS COG1486 917529 918842 + [G] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 439 cds-WP_015683804.1 CDS COG1609 919091 920113 + [K] Transcriptional regulators istA_10 CDS COG4584 920127 921149 + [L] Transposase and inactivated derivatives istB_10 CDS COG1484 921146 921928 + [L] DNA replication protein 440 cds-WP_002208882.1 CDS COG4771 922137 924197 - [P] Outer membrane receptor for ferrienterochelin and 441 tsgA CDS NA 924683 925867 + NA 442 cds-WP_002228747.1 CDS COG1228 925952 927250 - [Q] Imidazolonepropionase and related amidohydrolases 443 nirB CDS COG1251 927572 930118 + [C] NAD(P)H-nitrite reductase nirD CDS COG2146 930115 930441 + [PR] Ferredoxin subunits of nitrite reductase and nirC CDS COG2116 930644 931450 + [P] Formate/nitrite family of transporters cysG CDS COG0007 931538 932950 + [H] Uroporphyrinogen-III methylase 444 trpS CDS COG0180 933105 934145 - [J] Tryptophanyl-tRNA synthetase cds-WP_002208892.1 CDS COG0546 934147 934845 - [R] Predicted phosphatases rpe CDS COG0036 934838 935515 - [G] Pentose-5-phosphate-3-epimerase 445 dam CDS COG0338 935818 936633 - [L] Site-specific DNA methylase cds-WP_002208897.1 CDS COG3266 936717 937706 - [S] Uncharacterized protein conserved in bacteria 446 aroB CDS COG0337 937960 939048 - [E] 3-dehydroquinate synthetase aroK CDS COG0703 939105 939626 - [E] Shikimate kinase 447 hofQ CDS COG4796 939975 941201 - [U] Type II secretory pathway, component HofQ 448 cds-WP_002208901.1 CDS NA 941134 941523 + NA 449 cds-WP_002223837.1 CDS NA 941526 941885 - NA cds-WP_002217890.1 CDS NA 941920 942501 - NA cds-WP_002208904.1 CDS COG3166 942494 943099 - [NU] Tfp pilus assembly protein PilN pilM CDS COG4972 943099 943995 - [NU] Tfp pilus assembly protein, ATPase PilM 450 mrcA CDS COG5009 944115 946670 + [M] Membrane carboxypeptidase/penicillin-binding protein 451 nudE CDS COG0494 946806 947351 - [LR] NTP pyrophosphohydrolases including oxidative damage repair 452 cds-WP_002208908.1 CDS NA 947938 950085 + NA 453 yrfG CDS COG1011 950229 950909 + [R] Predicted hydrolase (HAD superfamily) hslR CDS COG1188 950938 951345 + [J] Ribosome-associated heat shock protein implicated in hslO CDS COG1281 951508 952389 + [O] Disulfide bond chaperones of the HSP33 pckA CDS COG1866 952586 954205 + [C] Phosphoenolpyruvate carboxykinase (ATP) 454 envZ CDS COG2205 954340 955692 - [T] Osmosensitive K+ channel histidine kinase ompR CDS COG0745 955689 956408 - [TK] Response regulators consisting of a CheY-like greB CDS COG0782 956544 957059 - [K] Transcription elongation factor 455 cds-WP_002208916.1 CDS COG2183 957593 959968 + [K] Transcriptional accessory protein 456 feoA CDS COG1918 960492 960719 + [P] Fe2+ transport system protein A feoB CDS COG0370 960811 963126 + [P] Fe2+ transport system protein B cds-WP_002208920.1 CDS ROG1872 963162 963419 + NA 457 cds-WP_002208921.1 CDS NA 963557 963826 - NA 458 bioH CDS COG0596 963996 964772 - [R] Predicted hydrolases or acyltransferases (alpha/beta hydrolase 459 gntX CDS COG1040 964859 965560 + [R] Predicted amidophosphoribosyltransferases nfuA CDS COG0694 965620 966195 + [O] Thioredoxin-like proteins and domains 460 malQ CDS COG1640 966524 968620 - [G] 4-alpha-glucanotransferase malP CDS COG0058 968633 971037 - [G] Glucan phosphorylase 461 malT CDS COG2909 971355 974066 + [K] ATP-dependent transcriptional regulator 462 glpE CDS COG0607 974441 974770 + [P] Rhodanese-related sulfurtransferase glpG CDS COG0705 974788 975624 + [R] Uncharacterized membrane protein (homolog of Drosophila cds-WP_002208930.1 CDS COG1349 975659 976417 + [KG] Transcriptional regulators of sugar metabolism 463 cds-WP_100067904.1-2 CDS COG2963 976610 977060 + [L] Transposase and inactivated derivatives cds-WP_100067904.1-2_2 CDS NA 977060 977964 + NA 464 metF CDS COG0685 978150 979034 - [E] 5,10-methylenetetrahydrofolate reductase cds-WP_002208934.1 CDS COG0527 979267 981702 - [E] Aspartokinases metB CDS COG0626 981705 982864 - [E] Cystathionine beta-lyases/cystathionine gamma-synthases 465 metJ CDS COG3060 983242 983559 + [KE] Transcriptional regulator of met regulon 466 yiaA CDS COG4682 983908 984363 + [S] Predicted membrane protein 467 rpmE CDS COG0254 984906 985121 - [J] Ribosomal protein L31 468 priA CDS COG1198 985364 987562 + [L] Primosomal protein N' (replication factor Y) 469 cds-WP_002216732.1 CDS NA 987649 987792 + NA 470 cytR CDS COG1609 987915 988943 + [K] Transcriptional regulators 471 ftsN CDS COG3087 989009 989854 + [D] Cell division protein hslV CDS COG5405 989954 990478 + [O] ATP-dependent protease HslVU (ClpYQ), peptidase subunit hslU CDS COG1220 990549 991880 + [O] ATP-dependent protease HslVU (ClpYQ), ATPase subunit 472 cds-WP_002208944.1 CDS COG1575 992116 993033 + [H] 1,4-dihydroxy-2-naphthoate octaprenyltransferase rraA CDS COG0684 993175 993660 + [H] Demethylmenaquinone methyltransferase 473 cds-WP_002208946.1 CDS ROG3131 993777 994310 - NA 474 cds-WP_002215873.1 CDS NA 994991 995230 - NA 475 cds-WP_002208949.1 CDS ROG0722 995443 996735 + NA cds-A1122_RS04620 CDS COG2274 996728 997558 + [V] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal 476 istA_11 CDS COG4584 997647 998669 + [L] Transposase and inactivated derivatives istB_11 CDS COG1484 998666 999448 + [L] DNA replication protein 477 cds-A1122_RS04635 CDS COG2274 999513 1000802 + [V] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal 478 tnpA_13 CDS COG1943 1001180 1001638 + [L] Transposase and inactivated derivatives 479 zapB CDS COG3074 1001846 1002085 - [S] Uncharacterized protein conserved in bacteria 480 cds-WP_002208954.1 CDS COG0580 1002713 1003561 + [G] Glycerol uptake facilitator and related permeases 481 glpK CDS NA 1003738 1005260 + NA 482 glpX CDS COG1494 1005497 1006507 + [G] Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins 483 fpr CDS COG1018 1006662 1007408 + [C] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 484 cds-WP_002208957.1 CDS COG3152 1007749 1008183 - [S] Predicted membrane protein 485 cds-WP_002215864.1 CDS NA 1008331 1008966 + NA 486 tpiA CDS COG0149 1009095 1009862 + [G] Triosephosphate isomerase 487 cds-WP_002208960.1 CDS COG0583 1010094 1011329 - [K] Transcriptional regulator 488 cds-WP_002208961.1 CDS COG2120 1011466 1012203 + [S] Uncharacterized proteins, LmbE homologs cds-WP_002208962.1 CDS COG0684 1012200 1012913 + [H] Demethylmenaquinone methyltransferase 489 cds-WP_002208963.1 CDS COG0471 1012979 1014406 + [P] Di- and tricarboxylate transporters 490 cds-WP_002218867.1 CDS NA 1014524 1015300 + NA 491 cds-WP_002208965.1 CDS COG1613 1015550 1016539 - [P] ABC-type sulfate transport system, periplasmic component 492 pfkA CDS COG0205 1016760 1017743 - [G] 6-phosphofructokinase 493 fieF CDS COG0053 1017961 1018863 - [P] Predicted Co/Zn/Cd cation transporters 494 cds-A1122_RS24220 CDS COG3293 1018985 1019413 + [L] Transposase and inactivated derivatives 495 cds-WP_002353252.1 CDS COG5464 1019425 1020345 - [S] Uncharacterized conserved protein 496 cds-A1122_RS22075 CDS COG4973 1020572 1020904 + [L] Site-specific recombinase XerC 497 cpxP CDS COG3678 1021062 1021550 - [UNTP] P pilus assembly/Cpx signaling pathway, periplasmic 498 cpxR CDS COG0745 1021724 1022422 + [TK] Response regulators consisting of a CheY-like cpxA CDS COG2205 1022419 1023795 + [T] Osmosensitive K+ channel histidine kinase 499 ada CDS COG2169 1023844 1024908 - [F] Adenosine deaminase 500 trmL CDS COG0219 1025097 1025585 + [J] Predicted rRNA methylase (SpoU class) 501 cysE CDS COG1045 1025708 1026529 - [E] Serine acetyltransferase 502 gpsA CDS COG0240 1026795 1027814 - [C] Glycerol-3-phosphate dehydrogenase secB CDS COG1952 1027814 1028290 - [U] Preprotein translocase subunit SecB grxC CDS COG0695 1028378 1028626 - [O] Glutaredoxin and related proteins cds-WP_002208978.1 CDS COG0607 1028745 1029179 - [P] Rhodanese-related sulfurtransferase 503 gpmM CDS COG0696 1029576 1031123 + [G] Phosphoglyceromutase envC CDS COG4942 1031133 1032503 + [D] Membrane-bound metallopeptidase cds-A1122_RS04800 CDS COG2861 1032527 1033461 + [S] Uncharacterized protein conserved in bacteria 504 tdh CDS COG1063 1033599 1034624 - [ER] Threonine dehydrogenase and related Zn-dependent dehydrogenases cds-WP_002208982.1 CDS COG0156 1034634 1035845 - [H] 7-keto-8-aminopelargonate synthetase and related enzymes 505 rfaD CDS COG0451 1036091 1037023 + [MG] Nucleoside-diphosphate-sugar epimerases rfaF CDS COG0859 1037054 1038118 + [M] ADP-heptose:LPS heptosyltransferase rfaC CDS COG0859 1038118 1039083 + [M] ADP-heptose:LPS heptosyltransferase waaA CDS COG1519 1039506 1040780 + [M] 3-deoxy-D-manno-octulosonic-acid transferase cds-WP_002208987.1 CDS COG1215 1040781 1041563 + [M] Glycosyltransferases, probably involved in cell wall coaD CDS COG0669 1041560 1042039 + [H] Phosphopantetheine adenylyltransferase 506 mutM CDS COG0266 1042045 1042854 - [L] Formamidopyrimidine-DNA glycosylase rpmG CDS COG0267 1042937 1043104 - [J] Ribosomal protein L33 rpmB CDS COG0227 1043116 1043352 - [J] Ribosomal protein L28 radC CDS COG2003 1043615 1044283 - [L] DNA repair proteins 507 coaBC CDS COG0452 1044477 1045694 + [H] Phosphopantothenoylcysteine synthetase/decarboxylase dut CDS COG0756 1045672 1046130 + [F] dUTPase 508 slmA CDS COG1309 1046252 1046848 + [K] Transcriptional regulator 509 pyrE CDS COG0461 1046983 1047630 - [F] Orotate phosphoribosyltransferase rph CDS COG0689 1047797 1048513 - [J] RNase PH 510 cds-WP_002208998.1 CDS COG1561 1048640 1049503 + [S] Uncharacterized stress-induced protein 511 cds-A1122_RS04895 CDS COG2860 1049906 1050522 + [S] Predicted membrane protein 512 ligB CDS COG0272 1050542 1052245 - [L] NAD-dependent DNA ligase (contains BRCT domain 513 gmk CDS COG0194 1052646 1053269 + [F] Guanylate kinase rpoZ CDS COG1758 1053324 1053599 + [K] DNA-directed RNA polymerase, subunit K/omega spoT CDS COG0317 1053619 1055727 + [TK] Guanosine polyphosphate pyrophosphohydrolases/synthetases trmH CDS COG0566 1055733 1056425 + [J] rRNA methylases recG CDS COG1200 1056426 1058507 + [LK] RecG-like helicase 514 cds-WP_071529784.1 CDS NA 1058699 1058791 + NA 515 gltS CDS COG0786 1058873 1060087 - [E] Na+/glutamate symporter 516 cds-WP_002209006.1 CDS COG2233 1060325 1061710 + [F] Xanthine/uracil permeases 517 cds-WP_002209007.1 CDS NA 1061858 1063567 + NA 518 fabY CDS COG0454 1063702 1064625 - [KR] Histone acetyltransferase HPA2 and related acetyltransferases 519 istA_12 CDS COG4584 1064895 1065917 + [L] Transposase and inactivated derivatives istB_12 CDS COG1484 1065914 1066696 + [L] DNA replication protein 520 dtd CDS COG1490 1066770 1067207 - [J] D-Tyr-tRNAtyr deacylase cds-WP_002209010.1 CDS COG1295 1067214 1068098 - [S] Predicted membrane protein yihX CDS COG1011 1068195 1068785 - [R] Predicted hydrolase (HAD superfamily) 521 typA CDS COG1217 1069107 1070930 - [T] Predicted membrane GTPase involved in stress 522 glnA CDS COG0174 1071492 1072901 + [E] Glutamine synthetase 523 glnL CDS COG3852 1073154 1074203 + [T] Signal transduction histidine kinase, nitrogen specific glnG CDS COG2204 1074211 1075623 + [T] Response regulator containing CheY-like receiver, AAA-type 524 hemN CDS COG0635 1075677 1077050 - [H] Coproporphyrinogen III oxidase and related Fe-S 525 yihI CDS COG3078 1077233 1077799 - [S] Uncharacterized protein conserved in bacteria 526 yihA CDS COG0218 1078544 1079194 + [R] Predicted GTPase 527 tnpA_14 CDS COG1943 1079446 1079904 - [L] Transposase and inactivated derivatives 528 polA CDS COG0749 1080313 1083111 - [L] DNA polymerase I - 3'-5' exonuclease 529 dsbA CDS COG1651 1083603 1084226 - [O] Protein-disulfide isomerase cds-WP_002213169.1 CDS COG2334 1084254 1085240 - [R] Putative homoserine kinase type II (protein cds-WP_002213170.1 CDS COG3084 1085320 1085589 - [S] Uncharacterized protein conserved in bacteria 530 mobA CDS COG0746 1085743 1086330 + [H] Molybdopterin-guanine dinucleotide biosynthesis protein A mobB CDS COG1763 1086330 1086860 + [H] Molybdopterin-guanine dinucleotide biosynthesis protein 531 cds-WP_002209743.1 CDS COG3328 1086918 1088126 - [L] Transposase and inactivated derivatives 532 rrf rRNA NA 1088629 1088744 - NA rna-A1122_RS05065 rRNA NA 1088854 1091760 - NA rna-A1122_RS05070 tRNA NA 1092013 1092088 - NA rna-A1122_RS05075 rRNA NA 1092225 1093767 - NA 533 cds-WP_002215905.1 CDS COG2186 1094327 1095016 + [K] Transcriptional regulators mdtD CDS COG0477 1095096 1096520 + [GEPR] Permeases of the major facilitator superfamily 534 cds-WP_002215906.1 CDS COG1609 1096517 1096687 - [K] Transcriptional regulators rbsK CDS COG0524 1096740 1097666 - [G] Sugar kinases, ribokinase family rbsD CDS COG1869 1097717 1098136 - [G] ABC-type ribose transport system, auxiliary component 535 kup CDS COG3158 1098341 1100209 - [P] K+ transporter 536 ravA CDS ROG5956 1100483 1102036 + NA viaA CDS COG2425 1102040 1103506 + [R] Uncharacterized protein containing a von Willebrand 537 asnA CDS COG2502 1103605 1104597 - [E] Asparagine synthetase A 538 asnC CDS COG1522 1104767 1105228 + [K] Transcriptional regulators 539 mioC CDS COG0716 1105321 1105761 + [C] Flavodoxins 540 mnmG CDS COG0445 1106142 1108031 + [D] NAD/FAD-utilizing enzyme apparently involved in cell rsmG CDS COG0357 1108177 1108797 + [M] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial 541 atpI CDS COG3312 1109464 1109847 + [C] F0F1-type ATP synthase, subunit I atpB CDS COG0356 1109887 1110711 + [C] F0F1-type ATP synthase, subunit a atpE CDS COG0636 1110761 1111000 + [C] F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, atpF CDS COG0711 1111062 1111532 + [C] F0F1-type ATP synthase, subunit b atpH CDS COG0712 1111547 1112080 + [C] F0F1-type ATP synthase, delta subunit (mitochondrial atpA CDS COG0056 1112095 1113636 + [C] F0F1-type ATP synthase, alpha subunit atpG CDS COG0224 1113698 1114561 + [C] F0F1-type ATP synthase, gamma subunit atpD CDS COG0055 1114717 1116099 + [C] F0F1-type ATP synthase, beta subunit cds-WP_002215546.1 CDS COG0355 1116121 1116543 + [C] F0F1-type ATP synthase, epsilon subunit (mitochondrial 542 glmU CDS COG1207 1117164 1118534 + [M] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch glmS CDS COG0449 1118735 1120564 + [M] Glucosamine 6-phosphate synthetase, contains amidotransferase and 543 pstS CDS COG0226 1121047 1122087 + [P] ABC-type phosphate transport system, periplasmic component pstC CDS COG0573 1122316 1123272 + [P] ABC-type phosphate transport system, permease component pstA CDS COG0581 1123274 1124161 + [P] ABC-type phosphate transport system, permease component pstB CDS COG1117 1124242 1125018 + [P] ABC-type phosphate transport system, ATPase component phoU CDS COG0704 1125106 1125828 + [P] Phosphate uptake regulator 544 cds-WP_002228151.1 CDS COG1664 1126124 1126795 + [M] Integral membrane protein CcmA involved in 545 cds-WP_002215568.1 CDS COG0834 1127015 1127869 + [ET] ABC-type amino acid transport/signal transduction systems, cds-WP_002215571.1 CDS COG0765 1128052 1128789 + [E] ABC-type amino acid transport system, permease cds-WP_002215573.1 CDS COG0765 1128791 1129546 + [E] ABC-type amino acid transport system, permease 546 yieH CDS COG0637 1129581 1130249 - [R] Predicted phosphatase/phosphohexomutase 547 cds-WP_071525562.1 CDS NA 1130324 1130422 - NA 548 cds-WP_002215577.1 CDS COG2252 1130742 1132070 + [R] Permeases 549 cds-A1122_RS24230 CDS NA 1132249 1132458 - NA 550 cds-WP_002215581.1 CDS NA 1132615 1133235 + NA cds-WP_002215583.1 CDS COG1277 1133297 1133578 + [R] ABC-type transport system involved in multi-copper 551 cds-WP_002215585.1 CDS NA 1133670 1133963 + NA 552 fabV CDS COG3007 1134046 1135245 - [S] Uncharacterized paraquat-inducible protein B 553 mnmE CDS COG0486 1135431 1136795 - [R] Predicted GTPase yidC CDS COG0706 1136938 1138578 - [U] Preprotein translocase subunit YidC yidD CDS COG0759 1138581 1138838 - [S] Uncharacterized conserved protein rnpA CDS COG0594 1138802 1139161 - [J] RNase P protein component rpmH CDS ROG3844 1139180 1139320 - NA 554 dnaA CDS COG0593 1140030 1141418 + [L] ATPase involved in DNA replication initiation dnaN CDS COG0592 1141423 1142523 + [L] DNA polymerase sliding clamp subunit (PCNA recF CDS COG1195 1142696 1143781 + [L] Recombinational DNA repair ATPase (RecF pathway) gyrB CDS COG0187 1143801 1146215 + [L] Type IIA topoisomerase (DNA gyrase/topo II, 555 yidA CDS COG0561 1146431 1147240 + [R] Predicted hydrolases of the HAD superfamily 556 cds-WP_100067904.1-3 CDS COG2963 1148535 1148985 - [L] Transposase and inactivated derivatives cds-WP_100067904.1-3_2 CDS NA 1147631 1148535 - NA 557 cds-WP_002209639.1 CDS COG2423 1149192 1150145 - [E] Predicted ornithine cyclodeaminase, mu-crystallin homolog cds-WP_002209638.1 CDS COG1171 1150139 1151101 - [E] Threonine dehydratase 558 cds-A1122_RS23585 CDS NA 1151309 1151924 + NA 559 cds-WP_002209637.1 CDS COG5645 1151964 1152302 - [R] Predicted periplasmic lipoprotein 560 ibpA CDS COG0071 1152670 1153083 + [O] Molecular chaperone (small heat shock protein) ibpB CDS COG0071 1153364 1153828 + [O] Molecular chaperone (small heat shock protein) 561 cds-WP_002209634.1 CDS COG2985 1154201 1155859 + [R] Predicted permease 562 cds-WP_002228155.1 CDS COG3977 1155972 1157237 - [E] Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase 563 cds-WP_002209632.1 CDS NA 1157692 1158135 - NA 564 cds-WP_002209631.1 CDS COG0366 1158550 1160613 - [G] Glycosidases 565 ghrB CDS COG1052 1160902 1161882 - [CHR] Lactate dehydrogenase and related dehydrogenases 566 cds-WP_002209629.1 CDS COG2345 1162401 1163045 + [K] Predicted transcriptional regulator 567 cds-WP_002209628.1 CDS COG2885 1163176 1163835 - [M] Outer membrane protein and related peptidoglycan-associated 568 cds-WP_002209627.1 CDS COG0454 1164193 1164648 - [KR] Histone acetyltransferase HPA2 and related acetyltransferases cds-WP_002209626.1 CDS COG2818 1164645 1165217 - [L] 3-methyladenine DNA glycosylase 569 glyQ CDS COG0752 1165545 1166459 + [J] Glycyl-tRNA synthetase, alpha subunit glyS CDS COG0751 1166469 1168538 + [J] Glycyl-tRNA synthetase, beta subunit 570 cds-WP_002209622.1 CDS COG4808 1169011 1169730 + [S] Uncharacterized protein conserved in bacteria 571 cds-A1122_RS24615 CDS NA 1169863 1169976 + NA 572 cds-WP_002209621.1 CDS COG2213 1170380 1172311 + [G] Phosphotransferase system, mannitol-specific IIBC component cds-WP_002209620.1 CDS COG0246 1172448 1173611 + [G] Mannitol-1-phosphate/altronate dehydrogenases cds-WP_002209619.1 CDS COG3722 1173818 1174372 + [K] Transcriptional regulator 573 cds-WP_002209618.1 CDS ROG4032 1174621 1174977 + NA 574 cds-WP_002209617.1 CDS ROG1292 1175146 1175622 - NA 575 cds-WP_002217114.1 CDS ROG5796 1176154 1176486 - NA 576 cds-WP_002209615.1 CDS COG0840 1176676 1178625 - [NT] Methyl-accepting chemotaxis protein 577 sodA CDS COG0605 1178969 1179592 - [P] Superoxide dismutase 578 fdhD CDS COG1526 1180028 1180852 - [C] Uncharacterized protein required for formate dehydrogenase 579 fdnG CDS COG0243 1181049 1184096 + [C] Anaerobic dehydrogenases, typically selenocysteine-containing fdxH CDS COG0437 1184109 1185080 + [C] Fe-S-cluster-containing hydrogenase components 1 fdoI CDS COG2864 1185077 1185751 + [C] Cytochrome b subunit of formate dehydrogenase fdhE CDS COG3058 1185751 1186680 + [O] Uncharacterized protein involved in formate dehydrogenase selA CDS COG1921 1186864 1188252 + [E] Selenocysteine synthase [seryl-tRNASer selenium transferase] selB CDS COG3276 1188249 1190202 + [J] Selenocysteine-specific translation elongation factor 580 cds-A1122_RS05515 CDS COG4644 1190293 1190694 - [L] Transposase and inactivated derivatives, TnpA family 581 cds-WP_002215750.1 CDS NA 1190962 1191294 + NA 582 cds-WP_002215751.1 CDS NA 1191308 1191889 - NA 583 cds-WP_002215752.1 CDS NA 1191968 1192126 - NA 584 cds-WP_002209605.1 CDS NA 1192247 1192450 + NA 585 cds-WP_002215753.1 CDS COG0477 1192599 1193828 - [GEPR] Permeases of the major facilitator superfamily 586 cds-WP_100067904.1-4 CDS COG2963 1195205 1195655 - [L] Transposase and inactivated derivatives cds-WP_100067904.1-4_2 CDS NA 1194301 1195205 - NA 587 cds-WP_002209601.1 CDS NA 1195821 1196021 + NA cds-WP_002209600.1 CDS COG3274 1196018 1197010 + [S] Uncharacterized protein conserved in bacteria 588 cds-WP_002209597.1 CDS COG3539 1197892 1198449 + [NU] P pilus assembly protein, pilin FimA cds-WP_002228722.1 CDS COG3188 1198525 1200354 + [NU] P pilus assembly protein, porin PapC cds-WP_002215756.1 CDS COG3188 1200380 1201015 + [NU] P pilus assembly protein, porin PapC cds-WP_002209596.1 CDS COG3121 1201108 1201875 + [NU] P pilus assembly protein, chaperone PapD cds-WP_002209595.1 CDS NA 1201914 1202900 + NA 589 xylB CDS COG1070 1203018 1204472 - [G] Sugar (pentulose and hexulose) kinases xylA CDS COG2115 1204596 1205915 - [G] Xylose isomerase 590 xylF CDS COG4213 1206378 1207373 + [G] ABC-type xylose transport system, periplasmic component cds-WP_002209590.1 CDS COG1129 1207581 1209113 + [G] ABC-type sugar transport system, ATPase component xylH CDS COG4214 1209100 1210284 + [G] ABC-type xylose transport system, permease component 591 xylR CDS COG2207 1210374 1211567 + [K] AraC-type DNA-binding domain-containing proteins 592 rna-A1122_RS23600 tRNA NA 1211697 1211791 + NA 593 cds-WP_002209587.1 CDS COG0582 1211953 1213146 + [L] Integrase cds-WP_002209586.1 CDS NA 1213133 1214512 + NA 594 cds-WP_002214358.1 CDS ROG4411 1214780 1215025 - NA 595 cds-A1122_RS22160 CDS ROG0054 1215199 1216082 - NA 596 cds-WP_002209585.1 CDS COG2522 1216170 1216532 - [R] Predicted transcriptional regulator 597 cds-WP_071525517.1 CDS COG2026 1216595 1216807 - [JD] Cytotoxic translational repressor of toxin-antitoxin stability 598 cds-WP_002214362.1 CDS COG2944 1217520 1217705 + [K] Predicted transcriptional regulator 599 rhuM CDS NA 1217877 1218426 + NA 600 cds-WP_002209584.1 CDS COG4604 1218438 1219196 - [P] ABC-type enterochelin transport system, ATPase component cds-WP_002209583.1 CDS COG4605 1219193 1220200 - [P] ABC-type enterochelin transport system, permease component cds-WP_002209582.1 CDS COG4606 1220190 1221149 - [P] ABC-type enterochelin transport system, permease component cds-WP_002209581.1 CDS COG4607 1221159 1222112 - [P] ABC-type enterochelin transport system, periplasmic component 601 cds-WP_002209580.1 CDS ROG5589 1222635 1223879 - NA cds-WP_002209579.1 CDS NA 1223881 1224810 - NA 602 cds-WP_002209578.1 CDS COG0461 1224893 1225459 - [F] Orotate phosphoribosyltransferase cds-WP_002209577.1 CDS COG0031 1225456 1226400 - [E] Cysteine synthase 603 hutU CDS COG2987 1227127 1228818 + [E] Urocanate hydratase hutH CDS COG2986 1228815 1230347 + [E] Histidine ammonia-lyase 604 cds-WP_002214368.1 CDS COG1113 1230765 1232168 + [E] Gamma-aminobutyrate permease and related permeases 605 cds-WP_002209573.1 CDS COG2267 1232636 1234099 + [I] Lysophospholipase 606 eptB CDS COG2194 1234628 1236319 + [R] Predicted membrane-associated, metal-dependent hydrolase 607 uhpA CDS COG2197 1236435 1237025 + [TK] Response regulator containing a CheY-like receiver uhpB CDS COG3851 1237022 1238551 + [T] Signal transduction histidine kinase, glucose-6-phosphate specific cds-WP_002209567.1 CDS COG2271 1238646 1239977 + [G] Sugar phosphate permease 608 rna-A1122_RS05740 tRNA NA 1240094 1240170 + NA 609 cds-WP_002224153.1 CDS COG3210 1240483 1241874 + [U] Large exoproteins involved in heme utilization cds-WP_002222139.1 CDS COG2831 1242067 1243746 + [U] Hemolysin activation/secretion protein cds-WP_002217329.1 CDS NA 1243806 1244012 + NA 610 dppA CDS COG0747 1244415 1246022 + [E] ABC-type dipeptide transport system, periplasmic component dppB CDS COG0601 1246305 1247323 + [EP] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components dppC CDS COG1173 1247334 1248236 + [EP] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components dppD CDS COG0444 1248250 1249230 + [EP] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component dppF CDS COG4608 1249263 1250303 + [E] ABC-type oligopeptide transport system, ATPase component 611 bcsZ CDS COG3405 1250407 1251521 + [G] Endoglucanase Y 612 hmsP CDS COG2200 1251835 1253850 + [T] FOG: EAL domain 613 cds-WP_002209559.1 CDS ROG3356 1254490 1255194 + NA 614 cds-WP_002209555.1 CDS COG1331 1255440 1257158 + [O] Highly conserved protein containing a thioredoxin 615 cds-WP_002209554.1 CDS ROG4657 1257283 1257762 + NA 616 cds-WP_002209553.1 CDS COG1301 1258217 1259506 + [C] Na+/H+-dicarboxylate symporters 617 cds-WP_002209550.1 CDS COG0612 1259871 1261370 + [R] Predicted Zn-dependent peptidases 618 cds-WP_002209549.1 CDS COG0524 1261534 1262478 - [G] Sugar kinases, ribokinase family 619 cds-WP_002209548.1 CDS COG1942 1262757 1262957 - [R] Uncharacterized protein, 4-oxalocrotonate tautomerase homolog 620 pdeH CDS COG2200 1263176 1264021 + [T] FOG: EAL domain 621 cds-WP_002214772.1 CDS COG2982 1264326 1266548 + [M] Uncharacterized protein involved in outer membrane 622 cds-WP_002209546.1 CDS COG2134 1266525 1267322 - [I] CDP-diacylglycerol pyrophosphatase yhjD CDS COG1295 1267326 1268408 - [S] Predicted membrane protein 623 yapE CDS COG3468 1269086 1272298 + [MU] Type V secretory pathway, adhesin AidA 624 cds-WP_002209540.1 CDS NA 1272476 1273255 + NA cds-WP_002209539.1 CDS NA 1273257 1273754 + NA 625 cds-WP_002209538.1 CDS NA 1273822 1274328 + NA 626 cds-WP_002209537.1 CDS COG1929 1274574 1275710 - [G] Glycerate kinase cds-WP_002209536.1 CDS COG2610 1275721 1276989 - [GE] H+/gluconate symporter and related permeases 627 cds-WP_002227114.1 CDS NA 1276992 1277204 + NA 628 cds-WP_002209535.1 CDS COG3835 1277167 1278294 - [KT] Sugar diacid utilization regulator 629 gorA CDS COG1249 1278486 1279838 - [C] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) 630 cds-WP_002209533.1 CDS COG2961 1280024 1280866 - [R] Protein involved in catabolism of external 631 prlC CDS COG0339 1281195 1283237 + [E] Zn-dependent oligopeptidases rsmJ CDS NA 1283241 1284011 + NA 632 cds-WP_002209530.1 CDS COG2931 1284076 1285410 - [Q] RTX toxins and related Ca2+-binding proteins 633 gdhA CDS COG0334 1285658 1287001 - [E] Glutamate dehydrogenase/leucine dehydrogenase 634 uspA CDS COG0589 1287248 1287694 - [T] Universal stress protein UspA and related 635 uspB CDS NA 1288402 1288737 + NA 636 tnpA_15 CDS COG1943 1288870 1289328 - [L] Transposase and inactivated derivatives 637 pitA CDS COG0306 1289594 1291090 - [P] Phosphate/sulphate permeases 638 cds-WP_002215486.1 CDS COG2081 1291401 1292597 + [R] Predicted flavoproteins 639 cds-WP_002209524.1 CDS COG4191 1292733 1295288 - [T] Signal transduction histidine kinase regulating C4-dicarboxylate 640 cds-WP_002209523.1 CDS COG1129 1295477 1297000 + [G] ABC-type sugar transport system, ATPase component cds-WP_002209522.1 CDS COG4158 1296993 1297985 + [R] Predicted ABC-type sugar transport system, permease cds-WP_002209521.1 CDS COG1879 1298016 1298960 + [G] ABC-type sugar transport system, periplasmic component cds-WP_002209520.1 CDS COG3822 1299035 1299718 + [R] ABC-type sugar transport system, auxiliary component cds-WP_002209519.1 CDS COG0191 1299744 1300604 + [G] Fructose/tagatose bisphosphate aldolase cds-WP_002209518.1 CDS COG0524 1300614 1301621 + [G] Sugar kinases, ribokinase family 641 cds-WP_002209516.1 CDS COG0745 1301806 1302543 - [TK] Response regulators consisting of a CheY-like 642 cds-WP_002355529.1 CDS NA 1302966 1303178 + NA 643 cds-WP_002209515.1 CDS COG1741 1303307 1304002 + [R] Pirin-related protein 644 gntR CDS COG1609 1304131 1305126 + [K] Transcriptional regulators 645 gntT CDS COG2610 1305218 1306534 - [GE] H+/gluconate symporter and related permeases 646 cds-WP_002209512.1 CDS COG3265 1306751 1307254 + [G] Gluconate kinase 647 cds-A1122_RS06005 CDS NA 1307436 1307666 + NA 648 cds-WP_002209509.1 CDS NA 1308055 1308444 + NA 649 cds-WP_002209508.1 CDS COG2095 1308684 1309277 - [U] Multiple antibiotic transporter 650 asd_2 CDS COG0136 1309635 1310738 + [E] Aspartate-semialdehyde dehydrogenase 651 cds-A1122_RS06030 CDS NA 1310907 1311205 + NA 652 cds-WP_002209505.1 CDS NA 1311504 1311803 + NA cds-WP_002209504.1 CDS NA 1311810 1312097 + NA 653 cds-A1122_RS23900 CDS NA 1312251 1312395 + NA 654 ilp CDS ROG3089 1313833 1322874 + NA 655 cds-WP_002209502.1 CDS COG3275 1323082 1324779 - [T] Putative regulator of cell autolysis 656 glgB CDS COG0296 1325285 1327468 + [G] 1,4-alpha-glucan branching enzyme glgX CDS COG1523 1327470 1329458 + [G] Type II secretory pathway, pullulanase PulA glgC CDS COG0448 1329468 1330755 + [G] ADP-glucose pyrophosphorylase glgA CDS COG0297 1330966 1332396 + [G] Glycogen synthase glgP CDS COG0058 1332565 1335012 + [G] Glucan phosphorylase 657 glpD CDS COG0578 1335175 1336596 - [C] Glycerol-3-phosphate dehydrogenase 658 cds-A1122_RS22200 CDS NA 1337533 1337694 + NA cds-WP_002209495.1 CDS NA 1337678 1338142 + NA 659 cds-WP_002209494.1 CDS NA 1338307 1338576 + NA 660 cds-A1122_RS06105 CDS COG2963 1338931 1340084 - [L] Transposase and inactivated derivatives 661 istA_13 CDS COG4584 1340171 1341193 + [L] Transposase and inactivated derivatives istB_13 CDS COG1484 1341190 1341972 + [L] DNA replication protein 662 cds-A1122_RS22205 CDS COG2963 1342041 1342245 - [L] Transposase and inactivated derivatives 663 ppc CDS COG2352 1342987 1345623 - [C] Phosphoenolpyruvate carboxylase 664 argE CDS COG0624 1345997 1347160 - [E] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 665 argC CDS COG0002 1347411 1348415 + [E] Acetylglutamate semialdehyde dehydrogenase argB CDS COG0548 1348581 1349357 + [E] Acetylglutamate kinase argH CDS COG0165 1349524 1350897 + [E] Argininosuccinate lyase 666 cds-WP_002209485.1 CDS COG4206 1351496 1353988 + [H] Outer membrane cobalamin receptor protein 667 cds-WP_002209484.1 CDS NA 1354210 1354827 + NA 668 cds-WP_002209483.1 CDS COG4618 1354993 1356801 + [R] ABC-type protease/lipase transport system, ATPase and 669 cds-WP_002209482.1 CDS ROG0722 1356877 1358205 + NA 670 cds-WP_002209481.1 CDS COG0810 1358270 1359073 + [M] Periplasmic protein TonB, links inner and 671 cds-WP_002209480.1 CDS COG1249 1359189 1360652 - [C] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) cds-WP_002209479.1 CDS COG0678 1360747 1361478 - [O] Peroxiredoxin 672 oxyR CDS COG0583 1361625 1362542 + [K] Transcriptional regulator 673 sthA CDS COG1249 1362525 1363925 - [C] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) 674 fabR CDS COG1309 1364143 1364778 + [K] Transcriptional regulator cds-WP_002209475.1 CDS NA 1364791 1365198 + NA 675 trmA CDS COG2265 1365332 1366435 - [J] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 676 btuB CDS COG4206 1366915 1368792 + [H] Outer membrane cobalamin receptor protein murI CDS COG0796 1368737 1369600 + [M] Glutamate racemase 677 rna-A1122_RS06240 rRNA NA 1370057 1371599 + NA rna-A1122_RS06245 tRNA NA 1371736 1371811 + NA rna-A1122_RS06250 rRNA NA 1372064 1374970 + NA rrf_2 rRNA NA 1375080 1375195 + NA rna-A1122_RS06260 tRNA NA 1375321 1375397 + NA rna-A1122_RS06265 tRNA NA 1375406 1375481 + NA 678 ytfQ CDS COG1879 1376459 1377415 + [G] ABC-type sugar transport system, periplasmic component ytfR CDS COG1129 1377501 1378991 + [G] ABC-type sugar transport system, ATPase component ytfT CDS COG4158 1379024 1380022 + [R] Predicted ABC-type sugar transport system, permease yjfF CDS COG1172 1380022 1381014 + [G] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 679 hdfR CDS COG0583 1381001 1381882 - [K] Transcriptional regulator 680 cds-WP_002212019.1 CDS COG3085 1382001 1382339 + [S] Uncharacterized protein conserved in bacteria 681 cds-WP_002212018.1 CDS COG0606 1382596 1384119 - [O] Predicted ATPase with chaperone activity 682 ilvL CDS NA 1384503 1384601 + NA 683 ilvG CDS COG0028 1384742 1386388 + [EH] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate ilvM CDS COG3978 1386385 1386642 + [S] Acetolactate synthase (isozyme II), small (regulatory) cds-WP_002212015.1 CDS COG0115 1386665 1387591 + [EH] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase ilvD CDS COG0129 1387902 1389752 + [EG] Dihydroxyacid dehydratase/phosphogluconate dehydratase ilvA CDS COG1171 1389758 1391302 + [E] Threonine dehydratase 684 cds-WP_002216998.1 CDS NA 1391433 1391897 - NA 685 cds-WP_002217000.1 CDS NA 1391977 1392438 - NA 686 cds-WP_002212010.1 CDS NA 1392518 1392979 - NA cds-WP_232558129.1 CDS NA 1392963 1393688 - NA cds-WP_002229747.1 CDS NA 1393727 1393882 - NA 687 cds-WP_002212009.1 CDS NA 1394530 1394739 + NA 688 ilvY CDS COG0583 1394794 1395675 - [K] Transcriptional regulator 689 ilvC CDS COG0059 1395961 1397439 + [EH] Ketol-acid reductoisomerase 690 cds-WP_002212006.1 CDS NA 1397620 1397820 + NA 691 cds-WP_002212005.1 CDS NA 1398028 1399458 + NA cds-WP_002212004.1 CDS NA 1399458 1399721 + NA 692 cds-WP_002215823.1 CDS NA 1399974 1400225 + NA cds-WP_002212003.1 CDS COG4947 1400227 1400484 + [S] Uncharacterized protein conserved in bacteria 693 cds-WP_002212001.1 CDS COG3121 1401119 1401853 - [NU] P pilus assembly protein, chaperone PapD stbD CDS COG3539 1401903 1403180 - [NU] P pilus assembly protein, pilin FimA cds-WP_002211999.1 CDS COG3188 1403287 1405914 - [NU] P pilus assembly protein, porin PapC cds-WP_002211998.1 CDS COG3121 1405942 1406673 - [NU] P pilus assembly protein, chaperone PapD cds-WP_002211997.1 CDS COG3539 1406737 1407267 - [NU] P pilus assembly protein, pilin FimA 694 cds-WP_002209743.1-2 CDS COG3328 1408077 1409285 - [L] Transposase and inactivated derivatives 695 cds-WP_002211996.1 CDS COG3823 1409382 1410173 - [O] Glutamine cyclotransferase 696 ppiC CDS COG0760 1410412 1410693 - [O] Parvulin-like peptidyl-prolyl isomerase cds-WP_002215828.1 CDS NA 1410713 1410898 - NA 697 rep CDS COG0210 1410897 1412918 + [L] Superfamily I DNA and RNA helicases 698 gppA CDS COG0248 1413086 1414577 - [FP] Exopolyphosphatase rhlB CDS COG0513 1414584 1415870 - [LKJ] Superfamily II DNA and RNA helicases 699 trxA CDS COG0526 1415989 1416315 + [OC] Thiol-disulfide isomerase and thioredoxins 700 rho CDS COG1158 1416795 1418054 + [K] Transcription termination factor 701 wecA CDS COG0472 1418589 1419686 + [M] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase wzzE CDS COG3765 1419707 1420783 + [M] Chain length determinant protein 702 wecB CDS COG0381 1421064 1422194 + [M] UDP-N-acetylglucosamine 2-epimerase wecC CDS COG0677 1422191 1423453 + [M] UDP-N-acetyl-D-mannosaminuronate dehydrogenase rffG CDS COG1088 1423444 1424517 + [M] dTDP-D-glucose 4,6-dehydratase rfbA CDS COG1209 1424812 1425693 + [M] dTDP-glucose pyrophosphorylase rffC CDS COG0454 1425671 1426408 + [KR] Histone acetyltransferase HPA2 and related acetyltransferases rffA CDS COG0399 1426410 1427540 + [M] Predicted pyridoxal phosphate-dependent enzyme apparently involved wzxE CDS COG2244 1427542 1428798 + [R] Membrane protein involved in the export cds-WP_002211979.1 CDS ROG4451 1428821 1429906 + NA wzyE CDS NA 1429903 1431267 + NA wecG CDS COG1922 1431276 1432016 + [M] Teichoic acid biosynthesis proteins 703 cds-WP_002220976.1 CDS COG1113 1432540 1433931 + [E] Gamma-aminobutyrate permease and related permeases 704 rna-A1122_RS06545 tRNA NA 1434080 1434156 + NA rna-A1122_RS06550 tRNA NA 1434240 1434315 + NA rna-A1122_RS06555 tRNA NA 1434332 1434418 + NA rna-A1122_RS06560 tRNA NA 1434494 1434570 + NA 705 cds-WP_269079279.1 CDS COG1943 1435437 1435568 + [L] Transposase and inactivated derivatives istA_14 CDS COG4584 1435582 1436604 + [L] Transposase and inactivated derivatives istB_14 CDS COG1484 1436601 1437383 + [L] DNA replication protein tnpA_16 CDS COG1943 1437399 1437854 + [L] Transposase and inactivated derivatives 706 hemY CDS COG3071 1438047 1439267 - [H] Uncharacterized enzyme of heme biosynthesis hemX CDS COG2959 1439270 1440394 - [H] Uncharacterized enzyme of heme biosynthesis hemD CDS COG1587 1440425 1441174 - [H] Uroporphyrinogen-III synthase hemC CDS COG0181 1441171 1442112 - [H] Porphobilinogen deaminase 707 cds-WP_002211467.1 CDS NA 1442333 1442533 - NA 708 cds-WP_002211468.1 CDS COG3072 1442606 1445158 + [F] Adenylate cyclase 709 cyaY CDS COG1965 1445402 1445722 - [P] Protein implicated in iron transport, frataxin 710 cds-WP_002211470.1 CDS COG5567 1445874 1446062 + [N] Predicted small periplasmic lipoprotein 711 dapF CDS COG0253 1446246 1447070 + [E] Diaminopimelate epimerase cds-WP_002211472.1 CDS COG3159 1447135 1447839 + [S] Uncharacterized protein conserved in bacteria xerC CDS COG4973 1447836 1448747 + [L] Site-specific recombinase XerC yigB CDS COG1011 1448747 1449463 + [R] Predicted hydrolase (HAD superfamily) 712 uvrD CDS COG0210 1449565 1451727 + [L] Superfamily I DNA and RNA helicases 713 cds-A1122_RS23615 CDS COG1309 1451841 1452527 - [K] Transcriptional regulator 714 cds-WP_002211477.1 CDS COG5441 1452955 1454172 + [S] Uncharacterized conserved protein cds-WP_002211478.1 CDS COG5564 1454198 1455028 + [R] Predicted TIM-barrel enzyme, possibly a dioxygenase 715 corA CDS COG0598 1455677 1456627 + [P] Mg2+ and Co2+ transporters 716 rarD CDS COG2962 1456725 1457615 - [R] Predicted permeases 717 cds-WP_002211482.1 CDS COG2050 1457702 1458172 - [Q] Uncharacterized protein, possibly involved in aromatic 718 pldA CDS COG2829 1458394 1459272 + [M] Outer membrane phospholipase A 719 recQ CDS COG0514 1459350 1461182 + [L] Superfamily II DNA helicase 720 rhtC CDS COG1280 1461289 1461909 + [E] Putative threonine efflux protein 721 rhtB CDS COG1280 1461960 1462580 - [E] Putative threonine efflux protein 722 pldB CDS COG2267 1462776 1463789 + [I] Lysophospholipase yigL CDS COG0561 1463824 1464633 + [R] Predicted hydrolases of the HAD superfamily 723 cds-WP_002366764.1 CDS NA 1464910 1466109 + NA 724 glpQ CDS COG0584 1466183 1467298 - [C] Glycerophosphoryl diester phosphodiesterase cds-A1122_RS24245 CDS COG2271 1467410 1467490 - [G] Sugar phosphate permease 725 cds-WP_002216569.1 CDS NA 1467651 1467749 + NA 726 glpA CDS COG0578 1467923 1469578 + [C] Glycerol-3-phosphate dehydrogenase glpB CDS COG3075 1469568 1470842 + [E] Anaerobic glycerol-3-phosphate dehydrogenase glpC CDS COG0247 1470839 1472134 + [C] Fe-S oxidoreductase 727 cds-WP_002211494.1 CDS ROG0653 1472296 1472823 - NA 728 cds-WP_002211495.1 CDS COG1738 1472953 1473621 - [S] Uncharacterized conserved protein 729 tusA CDS COG0425 1473905 1474159 + [O] Predicted redox protein, regulator of disulfide 730 cds-WP_002211497.1 CDS COG2217 1474243 1476609 - [P] Cation transport ATPase 731 cds-WP_002211498.1 CDS COG3714 1477023 1477649 - [S] Predicted membrane protein 732 cds-WP_002211499.1 CDS COG4517 1477939 1478259 + [S] Uncharacterized protein conserved in bacteria 733 cds-WP_002211500.1 CDS ROG6351 1478471 1478890 + NA 734 cds-WP_002211501.1 CDS COG3776 1479077 1479349 - [S] Predicted membrane protein rsmD CDS COG0742 1479339 1480001 - [L] N6-adenine-specific methylase 735 ftsY CDS COG0552 1480283 1481962 + [U] Signal recognition particle GTPase ftsE CDS COG2884 1481968 1482636 + [D] Predicted ATPase involved in cell division ftsX CDS COG2177 1482626 1483579 + [D] Cell division protein 736 rpoH CDS COG0568 1483890 1484747 + [K] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 737 tnpA_17 CDS COG1943 1484961 1485419 + [L] Transposase and inactivated derivatives 738 panM CDS NA 1485665 1486057 - NA 739 cds-WP_002211508.1 CDS COG0683 1486479 1487594 + [E] ABC-type branched-chain amino acid transport systems, livH CDS COG0559 1487775 1488701 + [E] Branched-chain amino acid ABC-type transport system, cds-WP_002211510.1 CDS COG4177 1488698 1489984 + [E] ABC-type branched-chain amino acid transport system, livG CDS COG0411 1489981 1490748 + [E] ABC-type branched-chain amino acid transport systems, livF CDS COG0410 1490793 1491494 + [E] ABC-type branched-chain amino acid transport systems, 740 cds-WP_002211513.1 CDS NA 1491722 1492183 + NA 741 cds-WP_002211514.1 CDS NA 1492298 1493404 - NA 742 cds-WP_002211515.1 CDS NA 1493531 1494049 - NA cds-WP_002211516.1 CDS ROG8001 1494111 1494758 - NA cds-WP_002211517.1 CDS ROG8001 1494730 1495416 - NA cds-WP_002211518.1 CDS NA 1495434 1497767 - NA 743 cds-WP_002228181.1 CDS ROG1743 1498034 1498525 - NA 744 ugpB CDS COG1653 1499080 1500399 + [G] ABC-type sugar transport system, periplasmic component ugpA CDS COG1175 1500697 1501584 + [G] ABC-type sugar transport systems, permease components ugpE CDS COG0395 1501581 1502426 + [G] ABC-type sugar transport system, permease component cds-WP_002211523.1 CDS COG3839 1502433 1503506 + [G] ABC-type sugar transport systems, ATPase components ugpQ CDS COG0584 1503503 1504252 + [C] Glycerophosphoryl diester phosphodiesterase cds-A1122_RS06900 CDS COG0679 1504353 1505308 + [R] Predicted permeases 745 cds-WP_002215597.1 CDS COG0697 1505661 1506560 + [GER] Permeases of the drug/metabolite transporter (DMT) 746 metR CDS COG0583 1506448 1507401 - [K] Transcriptional regulator 747 metE CDS COG0620 1507507 1509783 + [E] Methionine synthase II (cobalamin-independent) 748 cds-WP_002211527.1 CDS COG0412 1509838 1510710 - [Q] Dienelactone hydrolase and related enzymes 749 udp CDS COG2820 1511138 1511899 + [F] Uridine phosphorylase 750 cds-WP_002228183.1 CDS COG2365 1512020 1512850 + [T] Protein tyrosine/serine phosphatase 751 cds-WP_002211530.1 CDS COG1966 1513214 1515025 + [T] Carbon starvation protein, predicted membrane protein 752 cds-WP_002211531.1 CDS COG0586 1515297 1515827 + [S] Uncharacterized membrane-associated protein 753 rmuC CDS COG1322 1516035 1517540 + [S] Uncharacterized protein conserved in bacteria 754 ubiE CDS COG2226 1517632 1518387 + [H] Methylase involved in ubiquinone/menaquinone biosynthesis cds-WP_002215928.1 CDS COG3165 1518401 1519051 + [S] Uncharacterized protein conserved in bacteria ubiB CDS COG0661 1519051 1520682 + [R] Predicted unusual protein kinase 755 cds-WP_002211536.1 CDS COG1826 1520862 1521128 + [U] Sec-independent protein secretion pathway components tatB CDS COG1826 1521132 1521794 + [U] Sec-independent protein secretion pathway components tatC CDS COG0805 1521797 1522573 + [U] Sec-independent protein secretion pathway component TatC cds-A1122_RS06980 CDS COG0084 1522629 1523108 + [L] Mg-dependent DNase 756 istA_15 CDS COG4584 1523195 1524217 + [L] Transposase and inactivated derivatives istB_15 CDS COG1484 1524214 1524996 + [L] DNA replication protein 757 cds-A1122_RS06995 CDS COG0084 1525062 1525370 + [L] Mg-dependent DNase hemB CDS COG0113 1525385 1526407 + [H] Delta-aminolevulinic acid dehydratase 758 rfaH CDS COG0250 1526517 1527005 - [K] Transcription antiterminator 759 ubiD CDS COG0043 1527253 1528749 + [H] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases fre CDS COG0543 1528804 1529505 + [HC] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 760 fadA CDS COG0183 1529665 1530828 - [I] Acetyl-CoA acetyltransferase fadB CDS COG1250 1530840 1533029 - [I] 3-hydroxyacyl-CoA dehydrogenase 761 pepQ CDS COG0006 1533356 1534687 + [E] Xaa-Pro aminopeptidase cds-A1122_RS07035 CDS COG1739 1534687 1534857 + [S] Uncharacterized conserved protein 762 tnpA_18 CDS COG1943 1535001 1535459 + [L] Transposase and inactivated derivatives 763 cds-WP_002211549.1 CDS COG1739 1535532 1536008 + [S] Uncharacterized conserved protein trkH CDS COG0168 1536048 1537499 + [P] Trk-type K+ transport systems, membrane components hemG CDS COG4635 1537521 1538054 + [CH] Flavodoxin 764 rna-A1122_RS07065 rRNA NA 1538529 1540071 + NA rna-A1122_RS07070 tRNA NA 1540174 1540250 + NA rna-A1122_RS07075 tRNA NA 1540302 1540377 + NA rna-A1122_RS07080 rRNA NA 1540596 1543502 + NA rrf_3 rRNA NA 1543612 1543727 + NA 765 murB CDS COG0812 1544191 1545228 + [M] UDP-N-acetylmuramate dehydrogenase birA CDS COG0340 1545225 1546184 + [H] Biotin-(acetyl-CoA carboxylase) ligase 766 coaA CDS COG1072 1546219 1547169 - [H] Panthothenate kinase 767 cds-WP_002355327.1 CDS COG0454 1547380 1547838 - [KR] Histone acetyltransferase HPA2 and related acetyltransferases 768 istA_16 CDS COG4584 1548021 1549043 + [L] Transposase and inactivated derivatives istB_16 CDS COG1484 1549040 1549822 + [L] DNA replication protein 769 rna-A1122_RS07120 tRNA NA 1550286 1550361 + NA rna-A1122_RS07125 tRNA NA 1550380 1550464 + NA rna-A1122_RS07130 tRNA NA 1550614 1550688 + NA rna-A1122_RS07135 tRNA NA 1550695 1550770 + NA 770 tuf_2 CDS COG0050 1550879 1552063 + [J] GTPases - translation elongation factors secE CDS COG0690 1552314 1552697 + [U] Preprotein translocase subunit SecE nusG CDS COG0250 1552699 1553244 + [K] Transcription antiterminator rplK CDS COG0080 1553435 1553863 + [J] Ribosomal protein L11 rplA CDS COG0081 1553867 1554571 + [J] Ribosomal protein L1 rplJ CDS COG0244 1554936 1555433 + [J] Ribosomal protein L10 rplL CDS COG0222 1555500 1555868 + [J] Ribosomal protein L7/L12 rpoB CDS COG0085 1556211 1560239 + [K] DNA-directed RNA polymerase, beta subunit/140 kD rpoC CDS COG0086 1560368 1564588 + [K] DNA-directed RNA polymerase, beta' subunit/160 kD 771 tnpA_19 CDS COG1943 1564715 1565173 - [L] Transposase and inactivated derivatives 772 thiH CDS COG1060 1565605 1566735 - [HR] Thiamine biosynthesis enzyme ThiH and related cds-WP_002217273.1 CDS COG2022 1566728 1567543 - [H] Uncharacterized enzyme of thiazole biosynthesis thiS CDS COG2104 1567545 1567760 - [H] Sulfur transfer protein involved in thiamine cds-WP_002210680.1 CDS COG0476 1567757 1568554 - [H] Dinucleotide-utilizing enzymes involved in molybdopterin and thiE CDS COG0352 1568544 1569218 - [H] Thiamine monophosphate synthase thiC CDS COG0422 1569205 1571250 - [H] Thiamine biosynthesis protein ThiC 773 rsd CDS COG3160 1571626 1572135 - [K] Regulator of sigma D 774 nudC CDS COG2816 1572232 1573014 + [L] NTP pyrophosphohydrolases containing a Zn-finger, probably 775 cds-WP_002210685.1 CDS NA 1573107 1573892 + NA 776 hemE CDS COG0407 1574011 1575078 + [H] Uroporphyrinogen-III decarboxylase nfi CDS COG1515 1575144 1575848 + [L] Deoxyinosine 3'endonuclease (endonuclease V) cds-WP_002210688.1 CDS COG3068 1575894 1576484 + [S] Uncharacterized protein conserved in bacteria 777 hupA CDS COG0776 1576673 1576948 + [L] Bacterial nucleoid DNA-binding protein cds-WP_002355296.1 CDS COG3042 1576998 1577651 + [R] Putative hemolysin 778 purD CDS COG0151 1577799 1579085 - [F] Phosphoribosylamine-glycine ligase purH CDS COG0138 1579145 1580734 - [F] AICAR transformylase/IMP cyclohydrolase PurH (only IMP 779 rna-A1122_RS07290 rRNA NA 1581393 1582935 + NA rna-A1122_RS07295 tRNA NA 1583038 1583114 + NA rna-A1122_RS07300 tRNA NA 1583166 1583241 + NA rna-A1122_RS07305 rRNA NA 1583460 1586366 + NA rrf_4 rRNA NA 1586476 1586591 + NA 780 metA CDS COG1897 1587331 1588260 + [E] Homoserine trans-succinylase 781 aceB CDS COG2225 1588681 1590279 + [C] Malate synthase aceA CDS COG2224 1590326 1591633 + [C] Isocitrate lyase aceK CDS COG4579 1591889 1593616 + [T] Isocitrate dehydrogenase kinase/phosphatase 782 iclR CDS COG1414 1593736 1594580 - [K] Transcriptional regulator 783 metH CDS COG1410 1594795 1598490 + [E] Methionine synthase I, cobalamin-binding domain 784 cds-WP_002212081.1 CDS COG3210 1598586 1603493 - [U] Large exoproteins involved in heme utilization cds-WP_002228189.1 CDS COG2831 1603563 1605248 - [U] Hemolysin activation/secretion protein 785 lysC CDS COG0527 1605816 1607201 - [E] Aspartokinases 786 pgi CDS COG0166 1607571 1609217 + [G] Glucose-6-phosphate isomerase 787 psiE CDS COG3223 1609352 1609759 + [S] Predicted membrane protein 788 malG CDS COG3833 1609902 1610792 - [G] ABC-type maltose transport systems, permease component malF CDS COG1175 1610806 1612383 - [G] ABC-type sugar transport systems, permease components malE CDS COG2182 1612570 1613781 - [G] Maltose-binding periplasmic proteins/domains 789 cds-WP_002221973.1 CDS NA 1614343 1614579 + NA malK CDS COG3839 1614583 1615692 + [G] ABC-type sugar transport systems, ATPase components cds-WP_002212092.1 CDS COG4580 1615763 1617034 + [G] Maltoporin (phage lambda and maltose receptor) 790 malM CDS ROG8131 1617275 1618186 + NA 791 cds-WP_002212095.1 CDS NA 1618657 1618935 + NA 792 cds-WP_002212097.1 CDS COG3157 1619087 1619605 - [S] Hemolysin-coregulated protein (uncharacterized) 793 tssB_3 CDS COG3516 1620129 1620626 + [S] Uncharacterized protein conserved in bacteria tssC_3 CDS COG3517 1620694 1622175 + [S] Uncharacterized protein conserved in bacteria tssE CDS COG3518 1622182 1622622 + [S] Uncharacterized protein conserved in bacteria tssF_2 CDS COG3519 1622622 1623848 + [S] Uncharacterized protein conserved in bacteria 794 cds-WP_100067904.1-5 CDS COG2963 1624642 1625092 - [L] Transposase and inactivated derivatives cds-WP_100067904.1-5_2 CDS NA 1623738 1624642 - NA 795 cds-A1122_RS07455 CDS COG3519 1625176 1625886 + [S] Uncharacterized protein conserved in bacteria tssG_2 CDS COG3520 1625850 1626938 + [S] Uncharacterized protein conserved in bacteria tagH CDS COG3456 1627064 1628380 + [T] Uncharacterized conserved protein, contains FHA domain tssJ_2 CDS COG3521 1628380 1628925 + [S] Uncharacterized protein conserved in bacteria tssK_3 CDS COG3522 1628928 1630274 + [S] Uncharacterized protein conserved in bacteria icmH_2 CDS COG3455 1630274 1631041 + [S] Uncharacterized protein conserved in bacteria tssH_3 CDS COG0542 1631052 1633655 + [O] ATPases with chaperone activity, ATP-binding subunit cds-WP_002212108.1 CDS COG2204 1633652 1634449 + [T] Response regulator containing CheY-like receiver, AAA-type vasI CDS ROG4889 1634446 1635132 + NA tssA CDS COG3515 1635138 1636526 + [S] Uncharacterized protein conserved in bacteria tssM_2 CDS COG3523 1636558 1640091 + [S] Uncharacterized protein conserved in bacteria cds-WP_002213880.1 CDS COG3515 1640216 1640998 + [S] Uncharacterized protein conserved in bacteria cds-WP_002231833.1 CDS COG3515 1640905 1641528 + [S] Uncharacterized protein conserved in bacteria cds-WP_080375381.1 CDS COG3501 1641973 1643952 + [S] Uncharacterized protein conserved in bacteria cds-WP_002213383.1 CDS COG5435 1643958 1644416 + [S] Uncharacterized conserved protein cds-WP_002213873.1 CDS COG3209 1644409 1647273 + [M] Rhs family protein cds-WP_002213871.1 CDS COG3209 1647301 1648671 + [M] Rhs family protein cds-WP_002213869.1 CDS ROG6489 1648673 1649158 + NA 796 cds-WP_002213868.1 CDS NA 1649208 1649399 - NA 797 cds-WP_002213866.1 CDS COG2336 1649475 1649699 - [T] Growth regulator 798 cds-WP_002210018.1 CDS COG2932 1649781 1650188 - [K] Predicted transcriptional regulator 799 cds-WP_230583776.1 CDS COG3515 1650321 1650527 + [S] Uncharacterized protein conserved in bacteria cds-WP_002213863.1 CDS COG3501 1650549 1652747 + [S] Uncharacterized protein conserved in bacteria cds-WP_002213861.1 CDS COG5435 1652750 1653172 + [S] Uncharacterized conserved protein cds-WP_002210022.1 CDS COG3209 1653217 1657755 + [M] Rhs family protein cds-WP_002210023.1 CDS NA 1657764 1658558 + NA 800 cds-WP_002210024.1 CDS COG1082 1658905 1659804 - [G] Sugar phosphate isomerases/epimerases cds-WP_002210025.1 CDS COG0673 1659801 1660931 - [R] Predicted dehydrogenases and related proteins 801 cds-WP_002210026.1 CDS COG2207 1661201 1662067 + [K] AraC-type DNA-binding domain-containing proteins 802 rbsD_2 CDS COG1869 1662229 1662732 - [G] ABC-type ribose transport system, auxiliary component cds-WP_002210028.1 CDS COG0524 1662738 1663667 - [G] Sugar kinases, ribokinase family deoC_2 CDS COG0274 1663824 1664525 - [F] Deoxyribose-phosphate aldolase 803 ssuE CDS COG0431 1664996 1665577 + [R] Predicted flavoprotein cds-WP_002210033.1 CDS COG0715 1665592 1666713 + [P] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components ssuD CDS COG2141 1666732 1667880 + [C] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and ssuC CDS COG0600 1667892 1668686 + [P] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component ssuB CDS COG1116 1668683 1669498 + [P] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 804 cds-A1122_RS22275 CDS COG3041 1669678 1669875 - [S] Uncharacterized protein conserved in bacteria cds-A1122_RS24255 CDS NA 1669875 1669943 - NA 805 cds-WP_002210038.1 CDS COG3077 1670117 1670320 - [L] DNA-damage-inducible protein J 806 cds-WP_002210039.1 CDS COG2252 1670774 1672129 + [R] Permeases 807 cds-WP_002215816.1 CDS COG0025 1672478 1674127 + [P] NhaP-type Na+/H+ and K+/H+ antiporters 808 cds-WP_002210041.1 CDS NA 1674345 1675532 - NA 809 lpxP CDS COG1560 1675684 1676604 - [M] Lauroyl/myristoyl acyltransferase 810 cds-WP_002210043.1 CDS COG1879 1677398 1678387 + [G] ABC-type sugar transport system, periplasmic component cds-WP_002210044.1 CDS COG1129 1678591 1680087 + [G] ABC-type sugar transport system, ATPase component cds-WP_002210045.1 CDS COG1172 1680080 1681069 + [G] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components cds-WP_002210046.1 CDS COG1172 1681071 1682024 + [G] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components cds-WP_002210047.1 CDS COG1069 1682043 1683680 + [C] Ribulose kinase cds-WP_002210048.1 CDS COG0794 1683677 1684282 + [M] Predicted sugar phosphate isomerase involved in 811 yghU CDS COG0625 1684472 1685323 - [O] Glutathione S-transferase 812 cds-WP_002210050.1 CDS COG4222 1685577 1686923 + [S] Uncharacterized protein conserved in bacteria 813 cds-WP_002210051.1 CDS COG1076 1687030 1688205 - [O] DnaJ-domain-containing proteins 1 814 tnpA_20 CDS COG1943 1688610 1689068 + [L] Transposase and inactivated derivatives 815 cspA CDS COG1278 1689251 1689463 - [K] Cold shock proteins cds-WP_002210053.1 CDS COG1278 1689723 1689935 - [K] Cold shock proteins 816 cds-WP_002210054.1 CDS COG3133 1690468 1690935 - [M] Outer membrane lipoprotein 817 cds-WP_002210055.1 CDS COG1237 1691411 1692223 + [R] Metal-dependent hydrolases of the beta-lactamase superfamily 818 cds-WP_002210056.1 CDS COG2084 1692288 1693178 + [I] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases cds-WP_002217470.1 CDS COG0599 1693356 1693751 + [S] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 819 cds-WP_002210058.1 CDS COG0477 1693905 1695269 + [GEPR] Permeases of the major facilitator superfamily cds-WP_002210059.1 CDS COG1802 1695359 1696021 + [K] Transcriptional regulators 820 cds-WP_002210060.1 CDS NA 1696087 1696563 + NA 821 cds-A1122_RS22285 CDS NA 1696722 1696913 + NA 822 cds-A1122_RS22290 CDS COG3728 1697036 1697206 + [L] Phage terminase, small subunit 823 fis CDS COG2901 1697317 1697613 - [KL] Factor for inversion stimulation Fis, transcriptional dusB CDS COG0042 1697638 1698603 - [J] tRNA-dihydrouridine synthase 824 prmA CDS COG2264 1699192 1700073 - [J] Ribosomal protein L11 methylase panF CDS COG4145 1700149 1701603 - [H] Na+/panthothenate symporter cds-WP_002210066.1 CDS COG3924 1701593 1701835 - [S] Predicted membrane protein 825 cds-WP_162828711.1 CDS NA 1702771 1702947 + NA 826 accC CDS COG0439 1703193 1704542 - [I] Biotin carboxylase accB CDS COG0511 1704554 1705018 - [I] Biotin carboxyl carrier protein aroQ CDS COG0757 1705176 1705628 - [E] 3-dehydroquinate dehydratase II 827 msrQ CDS COG2717 1705891 1706511 - [S] Predicted membrane protein msrP CDS COG2041 1706511 1707611 - [R] Sulfite oxidase and related enzymes 828 cds-WP_002210074.1 CDS COG0604 1707834 1708811 - [CR] NADPH:quinone reductase and related Zn-dependent oxidoreductases 829 csrD CDS COG3706 1709212 1711128 + [T] Response regulator containing a CheY-like receiver 830 mreB CDS COG1077 1711465 1712508 + [D] Actin-like ATPase involved in cell morphogenesis mreC CDS COG1792 1712712 1713707 + [M] Cell shape-determining protein mreD CDS COG2891 1713704 1714192 + [M] Cell shape-determining protein cds-WP_002210078.1 CDS COG0424 1714206 1714799 + [D] Nucleotide-binding protein implicated in inhibition of rng CDS COG1530 1714789 1716258 + [J] Ribonucleases G and E yhdP CDS COG3164 1716352 1720275 + [S] Predicted membrane protein nit1 CDS COG0388 1720272 1721141 + [R] Predicted amidohydrolase tldD CDS COG0312 1721153 1722598 + [R] Predicted Zn-dependent proteases and their inactivated 831 cds-WP_002210083.1 CDS COG3209 1722801 1725659 - [M] Rhs family protein cds-WP_002210084.1 CDS COG3209 1725684 1728515 - [M] Rhs family protein cds-WP_011055211.1 CDS NA 1728556 1728729 - NA cds-WP_002210086.1 CDS ROG0855 1728716 1729075 - NA cds-WP_002210087.1 CDS ROG4884 1729072 1729473 - NA cds-WP_002214300.1 CDS ROG7288 1729486 1729788 - NA 832 cds-WP_002210089.1 CDS ROG0287 1729922 1734412 - NA cds-WP_002229661.1 CDS NA 1734469 1736610 - NA 833 cds-WP_002229660.1 CDS NA 1736679 1738061 - NA cds-WP_002210090.1 CDS NA 1738102 1740603 - NA 834 cds-WP_002214297.1 CDS COG0583 1740839 1741705 - [K] Transcriptional regulator aaeR CDS COG0583 1741966 1742877 - [K] Transcriptional regulator 835 aaeX CDS ROG4895 1743180 1743383 + NA aaeA CDS COG1566 1743391 1744326 + [V] Multidrug resistance efflux pump aaeB CDS COG1289 1744328 1746283 + [S] Predicted membrane protein 836 cds-A1122_RS07945 CDS COG1012 1746550 1748018 + [C] NAD-dependent aldehyde dehydrogenases 837 cds-WP_002214288.1 CDS ROG3767 1748213 1748686 + NA cds-WP_002210098.1 CDS COG2732 1748691 1748972 + [K] Barstar, RNAse (barnase) inhibitor 838 yjgA CDS COG3028 1749084 1749632 - [S] Uncharacterized protein conserved in bacteria 839 pmbA CDS COG0312 1749813 1751153 + [R] Predicted Zn-dependent proteases and their inactivated 840 cds-WP_011055205.1 CDS COG1247 1751402 1752046 + [M] Sortase and related acyltransferases 841 cybC CDS COG3783 1752254 1752640 + [C] Soluble cytochrome b562 842 rnk CDS COG0782 1752864 1753274 - [K] Transcription elongation factor 843 treC CDS COG0366 1753627 1755294 - [G] Glycosidases treB CDS COG1263 1755389 1756804 - [G] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 844 treR CDS COG1609 1757215 1758168 - [K] Transcriptional regulators 845 cds-WP_002210107.1 CDS NA 1758402 1758878 - NA 846 istB_17 CDS COG1484 1758994 1759776 - [L] DNA replication protein istA_17 CDS COG4584 1759773 1760795 - [L] Transposase and inactivated derivatives 847 ridA CDS COG0251 1761136 1761522 - [J] Putative translation initiation inhibitor, yjgF family pyrI CDS COG1781 1761660 1762124 - [F] Aspartate carbamoyltransferase, regulatory subunit pyrB CDS COG0540 1762136 1763071 - [F] Aspartate carbamoyltransferase, catalytic chain 848 npr CDS COG1925 1763409 1763681 - [G] Phosphotransferase system, HPr-related proteins rapZ CDS COG1660 1763678 1764532 - [R] Predicted P-loop-containing kinase ptsN CDS COG1762 1764838 1765320 - [GT] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) hpf CDS COG1544 1765438 1765725 - [J] Ribosome-associated protein Y (PSrp-1) rpoN CDS COG1508 1765749 1767182 - [K] DNA-directed RNA polymerase specialized sigma subunit, lptB CDS COG1137 1767244 1767969 - [R] ABC-type (unclassified) transport system, ATPase component lptA CDS COG1934 1767976 1768521 - [S] Uncharacterized protein conserved in bacteria lptC CDS COG3117 1768505 1769068 - [S] Uncharacterized protein conserved in bacteria kdsC CDS COG1778 1769065 1769628 - [R] Low specificity phosphatase (HAD superfamily) kdsD CDS COG0794 1769877 1770863 - [M] Predicted sugar phosphate isomerase involved in cds-WP_002210120.1 CDS COG0530 1770974 1771948 - [P] Ca2+/Na+ antiporter 849 mlaF CDS COG1127 1772213 1773031 + [Q] ABC-type transport system involved in resistance mlaE CDS COG0767 1773249 1774031 + [Q] ABC-type transport system involved in resistance mlaD CDS COG1463 1774036 1774593 + [Q] ABC-type transport system involved in resistance mlaC CDS COG2854 1774606 1775229 + [Q] ABC-type transport system involved in resistance mlaB CDS COG3113 1775265 1775567 + [R] Predicted NTP binding protein (contains STAS ibaG CDS COG5007 1775714 1775968 + [K] Predicted transcriptional regulator, BolA superfamily murA CDS COG0766 1776122 1777384 + [M] UDP-N-acetylglucosamine enolpyruvyl transferase 850 degS CDS COG0265 1777565 1778653 - [O] Trypsin-like serine proteases, typically periplasmic, contain 851 tnpA_21 CDS COG1943 1778879 1779337 + [L] Transposase and inactivated derivatives 852 degQ CDS COG0265 1779454 1780827 - [O] Trypsin-like serine proteases, typically periplasmic, contain 853 zapG CDS COG3105 1781098 1781502 - [S] Uncharacterized protein conserved in bacteria 854 zapE CDS COG1485 1781726 1782853 + [R] Predicted ATPase 855 rplM CDS COG0102 1783167 1783595 + [J] Ribosomal protein L13 rpsI CDS COG0103 1783610 1784002 + [J] Ribosomal protein S9 856 cds-WP_002230558.1 CDS NA 1783999 1784196 - NA 857 sspA CDS ROG1850 1784376 1785017 + NA sspB CDS COG2969 1785023 1785538 + [R] Stringent starvation protein B 858 cds-WP_002210137.1 CDS NA 1785691 1786176 - NA 859 cds-WP_002210138.1 CDS COG0493 1786617 1788035 - [ER] NADPH-dependent glutamate synthase beta chain and gltB CDS COG0069 1788045 1792511 - [E] Glutamate synthase domain 2 860 cds-WP_002210140.1 CDS COG1242 1793334 1794257 + [R] Predicted Fe-S oxidoreductase 861 arcB CDS COG0642 1794521 1796857 + [T] Signal transduction histidine kinase 862 elbB CDS COG3155 1797099 1797752 + [Q] Uncharacterized protein involved in an early mtgA CDS COG0744 1797749 1798474 + [M] Membrane carboxypeptidase (penicillin-binding protein) 863 dolP CDS COG2823 1798681 1799256 - [R] Predicted periplasmic or secreted lipoprotein diaA CDS COG0279 1799267 1799857 - [G] Phosphoheptose isomerase 864 cds-WP_002210147.1 CDS COG0792 1800128 1800481 - [L] Predicted endonuclease distantly related to archaeal cds-WP_002228200.1 CDS COG3107 1800565 1802538 - [R] Putative lipoprotein 865 rsmI CDS COG0313 1802601 1803500 + [R] Predicted methyltransferases 866 cds-WP_002210150.1 CDS COG1741 1804098 1804802 - [R] Pirin-related protein 867 cds-WP_002210151.1 CDS COG0583 1805064 1805957 + [K] Transcriptional regulator 868 cds-A1122_RS08255 CDS COG0435 1806088 1806971 - [O] Predicted glutathione S-transferase 869 istB_18 CDS COG1484 1807038 1807820 - [L] DNA replication protein istA_18 CDS COG4584 1807817 1808839 - [L] Transposase and inactivated derivatives 870 yjfP CDS COG1073 1808896 1809597 + [R] Hydrolases of the alpha/beta superfamily 871 cds-WP_002228199.1 CDS NA 1809672 1809950 + NA rpsF CDS COG0360 1809964 1810356 + [J] Ribosomal protein S6 priB CDS COG2965 1810362 1810682 + [L] Primosomal replication protein N rpsR CDS COG0238 1810687 1810914 + [J] Ribosomal protein S18 rplI CDS COG0359 1810954 1811406 + [J] Ribosomal protein L9 872 tnpA_22 CDS COG1943 1811602 1812060 + [L] Transposase and inactivated derivatives 873 cds-WP_002210157.1 CDS NA 1812182 1812637 - NA 874 cds-WP_002210158.1 CDS COG3061 1812777 1813517 - [M] Cell envelope opacity-associated protein A 875 cds-WP_002228198.1 CDS COG0545 1813860 1814480 + [O] FKBP-type peptidyl-prolyl cis-trans isomerases 1 876 ytfE CDS COG2846 1814578 1815243 - [D] Regulator of cell morphogenesis and NO 877 cds-WP_002210160.1 CDS COG0737 1815398 1817368 - [F] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 878 cysQ CDS COG1218 1817803 1818543 + [P] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase 879 cds-WP_002210162.1 CDS COG3054 1818546 1819109 - [R] Predicted transcriptional regulator 880 cds-WP_002210163.1 CDS ROG6034 1819445 1819657 + NA 881 cds-WP_002210164.1 CDS COG1253 1819765 1821096 - [R] Hemolysins and related proteins containing CBS 882 msrA CDS COG0225 1821374 1822012 - [O] Peptide methionine sulfoxide reductase 883 cds-WP_002210166.1 CDS COG0729 1822287 1824023 + [M] Outer membrane protein cds-WP_002210167.1 CDS COG2911 1824020 1827937 + [S] Uncharacterized protein conserved in bacteria cds-WP_002210168.1 CDS COG2105 1827940 1828296 + [S] Uncharacterized conserved protein 884 ppa CDS COG0221 1828414 1828941 - [C] Inorganic pyrophosphatase fbp CDS COG0158 1829141 1830154 - [G] Fructose-1,6-bisphosphatase 885 mpl CDS COG0773 1830325 1831707 + [M] UDP-N-acetylmuramate-alanine ligase 886 yhcN CDS NA 1832003 1832266 - NA 887 argR CDS COG1438 1832655 1833125 - [K] Arginine repressor 888 mdh CDS COG0039 1833589 1834527 + [C] Malate/lactate dehydrogenases 889 cds-WP_002210175.1 CDS COG3423 1834961 1835236 - [K] Predicted transcriptional regulator 890 cds-WP_002210176.1 CDS NA 1835420 1835767 + NA 891 ispB CDS COG0142 1835864 1836835 - [H] Geranylgeranyl pyrophosphate synthase 892 rplU CDS COG0261 1837095 1837406 + [J] Ribosomal protein L21 rpmA CDS COG0211 1837426 1837683 + [J] Ribosomal protein L27 893 cds-WP_002210180.1 CDS COG0697 1837771 1838757 + [GER] Permeases of the drug/metabolite transporter (DMT) cgtA CDS COG0536 1838758 1839930 + [R] Predicted GTPase 894 pmrB CDS COG4251 1840025 1841092 - [T] Bacteriophytochrome (light-regulated signal transduction histidine kinase) pmrA CDS COG0745 1841089 1841751 - [TK] Response regulators consisting of a CheY-like dacB CDS COG2027 1841757 1843205 - [M] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) 895 greA CDS COG0782 1843463 1843939 + [K] Transcription elongation factor 896 yhbY CDS COG1534 1844067 1844360 - [J] Predicted RNA-binding protein containing KH domain, 897 rlmE CDS COG0293 1844507 1845136 + [J] 23S rRNA methylase ftsH CDS COG0465 1845193 1847127 + [O] ATP-dependent Zn proteases folP CDS COG0294 1847247 1848080 + [H] Dihydropteroate synthase and related enzymes glmM CDS COG1109 1848090 1849430 + [G] Phosphomannomutase 898 secG CDS COG1314 1849653 1849988 + [U] Preprotein translocase subunit SecG 899 rna-A1122_RS08495 tRNA NA 1850081 1850167 + NA rna-A1122_RS08500 tRNA NA 1850228 1850304 + NA 900 rimP CDS COG0779 1850520 1850972 + [S] Uncharacterized protein conserved in bacteria nusA CDS COG0195 1850994 1852481 + [K] Transcription elongation factor infB CDS COG0532 1852506 1855160 + [J] Translation initiation factor 2 (IF-2; GTPase) rbfA CDS COG0858 1855226 1855636 + [J] Ribosome-binding factor A truB CDS COG0130 1855636 1856610 + [J] Pseudouridine synthase rpsO CDS COG0184 1856732 1857001 + [J] Ribosomal protein S15P/S13E 901 cds-WP_100067904.1-6 CDS COG2963 1857088 1857538 + [L] Transposase and inactivated derivatives cds-WP_100067904.1-6_2 CDS NA 1857538 1858442 + NA 902 pnp CDS COG1185 1858709 1860826 + [J] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) nlpI CDS COG4785 1860951 1861835 + [R] Lipoprotein NlpI, contains TPR repeats 903 cds-WP_002209261.1 CDS COG0513 1862022 1864016 + [LKJ] Superfamily II DNA and RNA helicases 904 cds-WP_002214818.1 CDS COG4679 1864252 1864620 + [S] Phage-related protein cds-WP_002209263.1 CDS COG1396 1864644 1864955 + [K] Predicted transcriptional regulators 905 cds-A1122_RS23645 CDS NA 1865086 1865157 + NA 906 cds-WP_002214817.1 CDS COG2141 1865210 1866265 - [C] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and 907 cds-WP_002209266.1 CDS COG0845 1866773 1867933 + [M] Membrane-fusion protein cds-WP_002209267.1 CDS COG0841 1867937 1871062 + [V] Cation/multidrug efflux pump cds-WP_002209268.1 CDS COG1538 1871064 1872470 + [MU] Outer membrane protein 908 cds-WP_002209269.1 CDS COG0826 1872611 1873489 - [O] Collagenase and related proteases cds-WP_002209270.1 CDS COG0826 1873501 1874496 - [O] Collagenase and related proteases 909 cds-WP_002209272.1 CDS COG3154 1874812 1875333 + [I] Putative lipid carrier protein cds-WP_002209273.1 CDS COG3153 1875327 1875833 + [R] Predicted acetyltransferase 910 cds-WP_002209274.1 CDS COG2827 1876008 1876295 - [L] Predicted endonuclease containing a URI domain 911 cds-WP_002209275.1 CDS ROG3185 1876526 1878544 - NA cds-WP_002209276.1 CDS NA 1878568 1879791 - NA 912 cds-WP_002209277.1 CDS COG1653 1880351 1881664 + [G] ABC-type sugar transport system, periplasmic component cds-WP_002209278.1 CDS COG1175 1881672 1882556 + [G] ABC-type sugar transport systems, permease components cds-WP_002209279.1 CDS COG0395 1882575 1883414 + [G] ABC-type sugar transport system, permease component ugpC CDS COG3839 1883426 1884520 + [G] ABC-type sugar transport systems, ATPase components cds-WP_002209281.1 CDS NA 1884535 1885701 + NA 913 cds-WP_002209282.1 CDS COG3787 1885800 1886243 + [S] Uncharacterized protein conserved in bacteria 914 cds-WP_002209283.1 CDS COG0702 1886395 1887033 + [MG] Predicted nucleoside-diphosphate-sugar epimerases 915 phnP CDS COG1235 1887046 1887798 - [R] Metal-dependent hydrolases of the beta-lactamase superfamily phnN CDS COG3709 1887789 1888370 - [P] Uncharacterized component of phosphonate metabolism phnM CDS COG3454 1888370 1889506 - [P] Metal-dependent hydrolase involved in phosphonate metabolism phnL CDS COG4778 1889503 1890222 - [P] ABC-type phosphonate transport system, ATPase component phnK CDS COG4107 1890611 1891402 - [P] ABC-type phosphonate transport system, ATPase component cds-WP_002209289.1 CDS COG3627 1891402 1892283 - [P] Uncharacterized enzyme of phosphonate metabolism cds-WP_002209290.1 CDS COG3626 1892276 1893454 - [P] Uncharacterized enzyme of phosphonate metabolism phnH CDS COG3625 1893454 1894080 - [P] Uncharacterized enzyme of phosphonate metabolism phnG CDS COG3624 1894080 1894556 - [P] Uncharacterized enzyme of phosphonate metabolism phnF CDS COG2188 1894557 1895282 - [K] Transcriptional regulators 916 nrdG CDS COG0602 1895610 1896074 - [O] Organic radical activating enzymes nrdD CDS COG1328 1896251 1898389 - [F] Oxygen-sensitive ribonucleoside-triphosphate reductase 917 cds-WP_002209297.1 CDS COG1124 1898823 1899539 - [EP] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component cds-WP_002209298.1 CDS COG1123 1899526 1900404 - [R] ATPase components of various ABC-type transport cds-WP_002209299.1 CDS COG1173 1900397 1901233 - [EP] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components cds-WP_002209300.1 CDS COG0601 1901252 1902301 - [EP] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components cds-A1122_RS08750 CDS COG0747 1902397 1903964 - [E] ABC-type dipeptide transport system, periplasmic component 918 cds-WP_002209301.1 CDS COG2731 1904603 1905061 + [G] Beta-galactosidase, beta subunit 919 argF CDS COG0078 1905368 1906375 - [E] Ornithine carbamoyltransferase 920 rraB CDS COG3076 1906587 1907018 + [S] Uncharacterized protein conserved in bacteria 921 cds-WP_002223170.1 CDS COG0454 1907525 1908028 - [KR] Histone acetyltransferase HPA2 and related acetyltransferases 922 cds-WP_002209307.1 CDS COG0525 1908171 1911068 - [J] Valyl-tRNA synthetase cds-WP_002209309.1 CDS COG2927 1911081 1911530 - [L] DNA polymerase III, chi subunit pepA CDS COG0260 1911681 1913192 - [E] Leucyl aminopeptidase 923 lptF CDS COG0795 1913472 1914566 + [R] Predicted permeases lptG CDS COG0795 1914566 1915642 + [R] Predicted permeases 924 rna-A1122_RS08800 tRNA NA 1915747 1915831 + NA 925 cds-WP_002209313.1 CDS COG0582 1916030 1917289 + [L] Integrase 926 cds-WP_002209314.1 CDS COG1479 1917443 1919353 + [S] Uncharacterized conserved protein cds-WP_002209315.1 CDS ROG2190 1919346 1920455 + NA 927 istB_19 CDS COG1484 1920506 1921288 - [L] DNA replication protein istA_19 CDS COG4584 1921285 1922307 - [L] Transposase and inactivated derivatives 928 tnpA_23 CDS COG1943 1922418 1922876 + [L] Transposase and inactivated derivatives 929 yacG CDS COG3024 1923066 1923272 - [S] Uncharacterized protein conserved in bacteria zapD CDS COG4582 1923458 1924210 - [S] Uncharacterized protein conserved in bacteria coaE CDS COG0237 1924207 1924827 - [H] Dephospho-CoA kinase cds-WP_002354912.1 CDS NA 1924837 1925037 - NA 930 cds-WP_002209320.1 CDS COG0516 1925123 1926166 + [F] IMP dehydrogenase/GMP reductase 931 hofC CDS COG1459 1926593 1927792 - [NU] Type II secretory pathway, component PulF gspE_2 CDS COG2804 1927789 1929327 - [NU] Type II secretory pathway, ATPase PulE/Tfp ppdD CDS COG4969 1929320 1929784 - [NU] Tfp pilus assembly protein, major pilin 932 nadC CDS COG0157 1929987 1930895 - [H] Nicotinate-nucleotide pyrophosphorylase 933 ampD CDS COG3023 1931008 1931559 + [V] Negative regulator of beta-lactamase expression ampE CDS COG3725 1931849 1932703 + [V] Membrane protein required for beta-lactamase induction 934 cds-WP_002209327.1 CDS COG1113 1933121 1934518 - [E] Gamma-aminobutyrate permease and related permeases 935 pdhR CDS COG2186 1935381 1936145 + [K] Transcriptional regulators aceE CDS COG2609 1936341 1939004 + [C] Pyruvate dehydrogenase complex, dehydrogenase (E1) component aceF CDS COG0508 1939018 1940547 + [C] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) lpdA CDS COG1249 1940853 1942277 + [C] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) 936 tnpA_24 CDS COG1943 1942520 1942978 + [L] Transposase and inactivated derivatives 937 acnB CDS COG1049 1943548 1946145 + [C] Aconitase B 938 yacL CDS COG3112 1946444 1946803 + [S] Uncharacterized protein conserved in bacteria 939 yddG CDS COG0697 1946914 1947822 - [GER] Permeases of the drug/metabolite transporter (DMT) 940 speD CDS COG1586 1948260 1949054 - [E] S-adenosylmethionine decarboxylase speE CDS COG0421 1949132 1950022 - [E] Spermidine synthase 941 cds-WP_002228215.1 CDS NA 1950139 1950486 - NA 942 cueO CDS COG2132 1950803 1952404 + [Q] Putative multicopper oxidases 943 hpt CDS COG0634 1952615 1953160 + [F] Hypoxanthine-guanine phosphoribosyltransferase 944 can CDS COG0288 1953314 1953976 - [P] Carbonic anhydrase 945 cds-WP_002209343.1 CDS COG1131 1954212 1955138 + [V] ABC-type multidrug transport system, ATPase component cds-WP_002209344.1 CDS COG0842 1955135 1955905 + [V] ABC-type multidrug transport system, permease component 946 cds-WP_002216851.1 CDS COG0726 1956112 1957425 + [G] Predicted xylanase/chitin deacetylase 947 panD CDS COG0853 1957574 1957954 - [H] Aspartate 1-decarboxylase panC CDS COG0414 1958365 1959219 - [H] Panthothenate synthetase panB CDS COG0413 1959307 1960104 - [H] Ketopantoate hydroxymethyltransferase 948 folK CDS COG0801 1960373 1960852 - [H] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase pcnB CDS COG0617 1960860 1962182 - [J] tRNA nucleotidyltransferase/poly(A) polymerase 949 gluQRS CDS COG0008 1962424 1963389 - [J] Glutamyl- and glutaminyl-tRNA synthetases 950 dksA CDS COG1734 1963669 1964124 - [T] DnaK suppressor protein 951 sfsA CDS COG1489 1964294 1965031 - [R] DNA-binding protein, stimulates sugar fermentation thpR CDS COG1514 1965144 1965719 - [J] 2'-5' RNA ligase 952 hrpB CDS COG1643 1965760 1968321 + [L] HrpA-like helicases 953 mrcB CDS COG0744 1968430 1970904 + [M] Membrane carboxypeptidase (penicillin-binding protein) 954 fhuC CDS COG1120 1971226 1972020 + [PH] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 955 cds-WP_002216485.1 CDS NA 1971976 1972164 - NA 956 fhuD CDS COG0614 1972197 1973108 + [P] ABC-type Fe3+-hydroxamate transport system, periplasmic component fhuB CDS COG0609 1973105 1975102 + [P] ABC-type Fe3+-siderophore transport system, permease component 957 hemL CDS COG0001 1975476 1976756 - [H] Glutamate-1-semialdehyde aminotransferase 958 clcA CDS COG0038 1977137 1978573 + [P] Chloride channel protein EriC 959 erpA CDS COG0316 1978709 1979053 + [S] Uncharacterized conserved protein 960 cds-WP_002209366.1 CDS COG2860 1979338 1979952 - [S] Predicted membrane protein btuF CDS COG0614 1979952 1980794 - [P] ABC-type Fe3+-hydroxamate transport system, periplasmic component mtnN CDS COG0775 1980794 1981495 - [F] Nucleoside phosphorylase 961 dgt CDS COG0232 1981789 1983309 + [F] dGTP triphosphohydrolase 962 degP CDS COG0265 1983507 1984952 + [O] Trypsin-like serine proteases, typically periplasmic, contain 963 barA CDS COG0642 1985127 1987919 - [T] Signal transduction histidine kinase 964 cds-WP_002216873.1 CDS NA 1988030 1988212 + NA cds-A1122_RS22355 CDS COG2265 1988252 1988353 + [J] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase relA CDS COG0317 1988363 1990597 + [TK] Guanosine polyphosphate pyrophosphohydrolases/synthetases mazG CDS COG1694 1990799 1991641 + [R] Predicted pyrophosphatase 965 pyrG CDS COG0504 1991853 1993490 + [F] CTP synthase (UTP-ammonia lyase) eno CDS COG0148 1993571 1994866 + [G] Enolase 966 sodC CDS COG2032 1995328 1995843 + [P] Cu/Zn superoxide dismutase 967 queE CDS COG0602 1995947 1996618 + [O] Organic radical activating enzymes 968 queD CDS COG0720 1996852 1997211 - [H] 6-pyruvoyl-tetrahydropterin synthase 969 cysJ CDS COG0369 1997604 1999424 + [P] Sulfite reductase, alpha subunit (flavoprotein) cysI CDS COG0155 1999424 2001154 + [P] Sulfite reductase, beta subunit (hemoprotein) cds-A1122_RS09150 CDS COG0175 2001151 2001877 + [EH] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase 970 cds-WP_071525553.1 CDS NA 2002017 2002127 + NA 971 cds-WP_002209383.1 CDS COG1598 2002120 2002527 - [S] Uncharacterized conserved protein cds-WP_002209384.1 CDS COG1724 2002702 2002902 - [N] Predicted periplasmic or secreted lipoprotein 972 cds-WP_002222261.1 CDS NA 2002995 2003192 + NA 973 cysG_2 CDS COG0007 2003493 2004911 + [H] Uroporphyrinogen-III methylase cysD CDS COG0175 2004922 2005830 + [EH] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase cysN CDS COG2895 2005923 2007359 + [P] GTPases - Sulfate adenylate transferase subunit cysC CDS COG0529 2007361 2008002 + [P] Adenylylsulfate kinase and related kinases 974 cds-WP_002209389.1 CDS NA 2008193 2008510 + NA 975 ftsB CDS COG2919 2008824 2009144 + [D] Septum formation initiator ispD CDS COG1211 2009148 2009873 + [I] 4-diphosphocytidyl-2-methyl-D-erithritol synthase ispF CDS COG0245 2010012 2010500 + [I] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase truD CDS COG0585 2010511 2011560 + [S] Uncharacterized conserved protein surE CDS COG0496 2011538 2012302 + [R] Predicted acid phosphatase cds-WP_002209395.1 CDS COG2518 2012296 2012922 + [O] Protein-L-isoaspartate carboxylmethyltransferase nlpD CDS COG0739 2013044 2014027 + [M] Membrane proteins related to metalloendopeptidases rpoS CDS COG0568 2014082 2015080 + [K] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 976 mutS CDS COG0249 2015416 2017971 - [L] Mismatch repair ATPase (MutS family) 977 rpiB CDS COG0698 2018765 2019220 - [G] Ribose 5-phosphate isomerase RpiB 978 cds-WP_002209403.1 CDS COG1063 2019703 2020818 + [ER] Threonine dehydrogenase and related Zn-dependent dehydrogenases cds-WP_002209404.1 CDS COG1028 2020882 2021652 + [IQR] Dehydrogenases with different specificities (related to cds-WP_002228229.1 CDS COG2376 2021739 2022740 + [G] Dihydroxyacetone kinase dhaL CDS COG2376 2022747 2023421 + [G] Dihydroxyacetone kinase 979 cds-WP_002209407.1 CDS COG2390 2023542 2024513 - [K] Transcriptional regulator, contains sigma factor-related N-terminal 980 cds-WP_002209408.1 CDS COG1055 2025067 2026356 - [P] Na+/H+ antiporter NhaD and related arsenite cds-WP_002209409.1 CDS COG0640 2026441 2026782 - [K] Predicted transcriptional regulators 981 cds-WP_002217994.1 CDS NA 2027029 2027292 - NA 982 cds-WP_002209410.1 CDS NA 2027503 2027706 - NA 983 cds-WP_002209411.1 CDS COG0834 2028130 2028894 - [ET] ABC-type amino acid transport/signal transduction systems, cds-WP_002209412.1 CDS COG1858 2028965 2030344 - [P] Cytochrome c peroxidase 984 cds-WP_002223220.1 CDS NA 2030581 2030832 - NA 985 cds-A1122_RS09310 CDS COG4771 2031005 2033101 + [P] Outer membrane receptor for ferrienterochelin and 986 cds-WP_002209414.1 CDS NA 2033534 2034721 + NA 987 map CDS COG0024 2035079 2035864 - [J] Methionine aminopeptidase cds-WP_002209417.1 CDS ROG1078 2035861 2036112 - NA 988 fumA CDS COG1951 2036295 2037938 - [C] Tartrate dehydratase alpha subunit/Fumarate hydratase class 989 cds-WP_002209419.1 CDS COG1070 2038336 2039832 - [G] Sugar (pentulose and hexulose) kinases cds-WP_002209420.1 CDS COG3623 2039843 2040724 - [G] Putative L-xylulose-5-phosphate 3-epimerase 990 cds-WP_002216010.1 CDS COG1172 2040930 2041967 - [G] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components cds-WP_002209421.1 CDS COG1172 2041980 2042969 - [G] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components cds-WP_002209422.1 CDS COG1129 2042962 2044476 - [G] ABC-type sugar transport system, ATPase component 991 tnpA_25 CDS COG1943 2044627 2045085 - [L] Transposase and inactivated derivatives 992 cds-WP_002216011.1 CDS COG1879 2045336 2046340 - [G] ABC-type sugar transport system, periplasmic component cds-WP_002209424.1 CDS COG1349 2046501 2047310 - [KG] Transcriptional regulators of sugar metabolism 993 cds-WP_002209426.1 CDS COG0235 2048013 2048708 + [G] Ribulose-5-phosphate 4-epimerase and related epimerases and 994 dmsA CDS COG0243 2049171 2051621 + [C] Anaerobic dehydrogenases, typically selenocysteine-containing cds-WP_002209428.1 CDS COG0437 2051633 2052250 + [C] Fe-S-cluster-containing hydrogenase components 1 cds-WP_002209429.1 CDS COG3302 2052252 2053112 + [R] DMSO reductase anchor subunit dmsD CDS COG3381 2053258 2053968 + [R] Uncharacterized component of anaerobic dehydrogenases 995 cybB CDS COG3038 2054225 2054755 - [C] Cytochrome B561 cybC_2 CDS COG3783 2054903 2055286 - [C] Soluble cytochrome b562 katG CDS COG0376 2055363 2057576 - [P] Catalase (peroxidase I) 996 cds-WP_002209434.1 CDS COG1879 2058112 2059053 + [G] ABC-type sugar transport system, periplasmic component cds-WP_002209435.1 CDS COG5618 2059146 2059763 + [R] Predicted periplasmic lipoprotein cds-WP_002209436.1 CDS COG1129 2059763 2061286 + [G] ABC-type sugar transport system, ATPase component cds-WP_002209437.1 CDS COG1172 2061283 2062428 + [G] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 997 cds-WP_002209438.1 CDS COG3959 2062684 2063514 + [G] Transketolase, N-terminal subunit cds-WP_002209439.1 CDS COG3958 2063507 2064451 + [G] Transketolase, C-terminal subunit cds-WP_002209440.1 CDS COG0554 2064454 2065941 + [C] Glycerol kinase cds-WP_002209441.1 CDS COG2407 2065962 2067386 + [G] L-fucose isomerase and related proteins 998 cds-WP_002209443.1 CDS COG2390 2067608 2068552 - [K] Transcriptional regulator, contains sigma factor-related N-terminal 999 cds-WP_002209444.1 CDS COG0477 2068800 2070140 - [GEPR] Permeases of the major facilitator superfamily 1000 pncC CDS COG1546 2070457 2070945 + [R] Uncharacterized protein (competence- and mitomycin-induced) recA CDS COG0468 2071060 2072130 + [L] RecA/RadA recombinase recX CDS COG2137 2072268 2072831 + [R] Uncharacterized protein conserved in bacteria alaS CDS COG0013 2072971 2075598 + [J] Alanyl-tRNA synthetase 1001 csrA CDS COG1551 2075848 2076033 + [T] Carbon storage regulator (could also regulate 1002 rna-A1122_RS09500 tRNA NA 2076396 2076488 + NA rna-A1122_RS09505 tRNA NA 2076497 2076573 + NA rna-A1122_RS09510 tRNA NA 2076631 2076707 + NA rna-A1122_RS09515 tRNA NA 2076787 2076863 + NA 1003 yqaB CDS COG0637 2077286 2077852 + [R] Predicted phosphatase/phosphohexomutase cds-WP_002209451.1 CDS COG1238 2077849 2078277 + [S] Predicted membrane protein gshA CDS COG2918 2078321 2079919 + [H] Gamma-glutamylcysteine synthetase luxS CDS COG1854 2080087 2080602 + [T] LuxS protein involved in autoinducer AI2 1004 tnpA_26 CDS COG1943 2080806 2081264 + [L] Transposase and inactivated derivatives tnpA_27 CDS COG1943 2081517 2081975 + [L] Transposase and inactivated derivatives 1005 cds-A1122_RS09560 CDS COG4536 2082113 2082787 - [P] Putative Mg2+ and Co2+ transporter CorB istB_20 CDS COG1484 2082841 2083623 - [L] DNA replication protein istA_20 CDS COG4584 2083620 2084642 - [L] Transposase and inactivated derivatives 1006 cds-A1122_RS09575 CDS COG4536 2084727 2085353 - [P] Putative Mg2+ and Co2+ transporter CorB cds-WP_002209455.1 CDS COG4137 2085425 2086216 - [R] ABC-type uncharacterized transport system, permease component 1007 ffh CDS COG0541 2086382 2087743 + [U] Signal recognition particle GTPase rpsP CDS COG0228 2087971 2088219 + [J] Ribosomal protein S16 rimM CDS COG0806 2088241 2088789 + [J] RimM protein, required for 16S rRNA trmD CDS COG0336 2088828 2089568 + [J] tRNA-(guanine-N1)-methyltransferase rplS CDS COG0335 2089649 2089996 + [J] Ribosomal protein L19 1008 tnpA_28 CDS COG1943 2090208 2090666 + [L] Transposase and inactivated derivatives 1009 cds-WP_002209462.1 CDS COG3137 2090969 2091736 - [M] Putative salt-induced outer membrane protein 1010 cds-A1122_RS22390 CDS COG2704 2092059 2093403 - [R] Anaerobic C4-dicarboxylate transporter 1011 btsR CDS COG3279 2093832 2094548 - [KT] Response regulator of the LytR/AlgR family 1012 cds-WP_002228238.1 CDS COG0722 2094781 2095851 + [E] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase tyrA CDS COG1605 2095864 2096985 + [E] Chorismate mutase 1013 pheA CDS COG0077 2097090 2097317 - [E] Prephenate dehydratase 1014 istB_21 CDS COG1484 2097385 2098167 - [L] DNA replication protein istA_21 CDS COG4584 2098164 2099186 - [L] Transposase and inactivated derivatives 1015 pheA_2 CDS COG0077 2099274 2100206 - [E] Prephenate dehydratase 1016 tnpA_29 CDS COG1943 2100489 2100947 + [L] Transposase and inactivated derivatives 1017 raiA CDS COG1544 2101278 2101640 - [J] Ribosome-associated protein Y (PSrp-1) 1018 bamD CDS COG4105 2101995 2102726 - [R] DNA uptake lipoprotein 1019 rluD CDS COG0564 2102862 2103839 + [J] Pseudouridylate synthases, 23S RNA-specific yfiH CDS COG1496 2103841 2104572 + [S] Uncharacterized conserved protein 1020 clpB CDS COG0542 2104702 2107275 + [O] ATPases with chaperone activity, ATP-binding subunit 1021 rna-A1122_RS09710 rRNA NA 2107792 2109334 + NA rna-A1122_RS09715 tRNA NA 2109437 2109513 + NA rna-A1122_RS09720 tRNA NA 2109565 2109640 + NA rna-A1122_RS09725 rRNA NA 2109859 2112765 + NA rrf_5 rRNA NA 2112875 2112990 + NA 1022 cds-WP_002208752.1 CDS COG5544 2113378 2113719 - [R] Predicted periplasmic lipoprotein pssA CDS NA 2113781 2115136 - NA 1023 cds-WP_002208750.1 CDS COG1042 2115312 2117954 - [C] Acyl-CoA synthetase (NDP forming) cds-WP_002208749.1 CDS COG3148 2117997 2118746 - [S] Uncharacterized conserved protein 1024 trxC CDS COG0526 2118916 2119353 - [OC] Thiol-disulfide isomerase and thioredoxins 1025 cds-WP_002208747.1 CDS COG0566 2119605 2120771 + [J] rRNA methylases 1026 emrB CDS COG0477 2120894 2122429 - [GEPR] Permeases of the major facilitator superfamily emrA CDS COG1566 2122468 2123640 - [V] Multidrug resistance efflux pump 1027 mprA CDS COG1846 2124024 2124536 - [K] Transcriptional regulators 1028 ygaH CDS NA 2124708 2125049 - NA cds-WP_002208742.1 CDS COG1296 2125046 2125819 - [E] Predicted branched-chain amino acid permease (azaleucine 1029 cds-WP_002208741.1 CDS COG2814 2125979 2127178 - [G] Arabinose efflux permease 1030 hpxZ CDS ROG1349 2127406 2127792 - NA 1031 cds-WP_002208739.1 CDS COG0154 2127902 2129299 - [J] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related hpxX CDS NA 2129296 2129499 - NA 1032 cds-WP_002208736.1 CDS COG1737 2129809 2130642 + [K] Transcriptional regulators 1033 cds-WP_002208735.1 CDS COG0834 2130970 2131758 + [ET] ABC-type amino acid transport/signal transduction systems, cds-WP_002208734.1 CDS COG0765 2131771 2132439 + [E] ABC-type amino acid transport system, permease cds-WP_002208733.1 CDS COG0765 2132436 2133089 + [E] ABC-type amino acid transport system, permease cds-WP_002208732.1 CDS COG1126 2133070 2133816 + [E] ABC-type polar amino acid transport system, cds-A1122_RS09845 CDS COG0075 2133848 2134756 + [E] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 1034 istB_22 CDS COG1484 2134822 2135604 - [L] DNA replication protein istA_22 CDS COG4584 2135601 2136623 - [L] Transposase and inactivated derivatives 1035 cds-WP_002208730.1 CDS COG0075 2136693 2137151 + [E] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase cds-WP_002208729.1 CDS COG2195 2137151 2138443 + [E] Di- and tripeptidases 1036 cds-WP_071525551.1 CDS NA 2138729 2138830 + NA 1037 cds-WP_002214693.1 CDS COG2831 2139532 2141322 + [U] Hemolysin activation/secretion protein cds-WP_002208725.1 CDS COG3210 2141363 2147095 + [U] Large exoproteins involved in heme utilization 1038 cds-WP_002208722.1 CDS NA 2147250 2149103 + NA cds-WP_002208721.1 CDS NA 2149105 2149851 + NA 1039 fadE CDS COG1960 2150023 2152470 - [I] Acyl-CoA dehydrogenases 1040 lpcA CDS COG0279 2152710 2153291 + [G] Phosphoheptose isomerase 1041 cds-WP_002208719.1 CDS COG0121 2153494 2154267 + [R] Predicted glutamine amidotransferase 1042 dpaA CDS COG3034 2154232 2154972 - [S] Uncharacterized protein conserved in bacteria 1043 cds-WP_002214689.1 CDS NA 2155187 2155366 - NA 1044 cds-WP_002208717.1 CDS COG1726 2155468 2156811 + [C] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA cds-WP_002208716.1 CDS COG1805 2156815 2158056 + [C] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB cds-WP_002208715.1 CDS COG2869 2158046 2158846 + [C] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC cds-WP_002208714.1 CDS COG1347 2158839 2159468 + [C] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD nqrE CDS COG2209 2159475 2160071 + [C] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE nqrF CDS COG2871 2160087 2161310 + [C] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF cds-WP_002227821.1 CDS COG1477 2161351 2162373 + [H] Membrane-associated lipoprotein involved in thiamine biosynthesis nqrM CDS COG2991 2162386 2162613 + [S] Uncharacterized protein conserved in bacteria 1045 cds-WP_002264514.1 CDS COG0584 2162857 2163789 - [C] Glycerophosphoryl diester phosphodiesterase 1046 dinB CDS COG0389 2164160 2165218 + [L] Nucleotidyltransferase/DNA polymerase involved in DNA repair 1047 pepD CDS COG2195 2165332 2166792 - [E] Di- and tripeptidases 1048 cds-WP_002216044.1 CDS COG0583 2168667 2169578 + [K] Transcriptional regulator 1049 cds-WP_002208705.1 CDS COG3397 2170038 2171642 - [S] Uncharacterized protein conserved in bacteria 1050 cds-WP_002216043.1 CDS ROG7288 2171839 2172144 - NA 1051 gpt CDS COG2236 2172571 2173029 + [R] Predicted phosphoribosyltransferases 1052 frsA CDS ROG4204 2173156 2174403 + NA crl CDS NA 2174463 2174864 + NA 1053 proB CDS COG0263 2175041 2176144 + [E] Glutamate 5-kinase proA CDS COG0014 2176160 2177413 + [E] Gamma-glutamyl phosphate reductase 1054 cds-WP_002208699.1 CDS COG5581 2177741 2178499 + [M] Predicted glycosyltransferase 1055 cds-WP_002208698.1 CDS ROG1749 2178697 2178951 + NA 1056 cds-A1122_RS10020 CDS COG0500 2179119 2179718 + [QR] SAM-dependent methyltransferases 1057 cds-WP_002208694.1 CDS COG3963 2180448 2181005 + [I] Phospholipid N-methyltransferase 1058 aroL CDS COG0703 2181252 2181776 + [E] Shikimate kinase 1059 ppnP CDS COG3123 2182266 2182553 + [S] Uncharacterized protein conserved in bacteria 1060 rdgC CDS COG2974 2182789 2183700 - [L] DNA recombination-dependent growth factor C 1061 mak CDS COG1940 2184033 2184947 + [KG] Transcriptional regulator/sugar kinase 1062 istA_23 CDS COG4584 2185679 2186701 + [L] Transposase and inactivated derivatives istB_23 CDS COG1484 2186698 2187480 + [L] DNA replication protein 1063 cds-WP_002208688.1 CDS COG0419 2187490 2191197 - [L] ATPase involved in DNA repair sbcD CDS COG0420 2191194 2192438 - [L] DNA repair exonuclease 1064 phoB CDS COG0745 2192706 2193395 + [TK] Response regulators consisting of a CheY-like phoR CDS COG0642 2193420 2194736 + [T] Signal transduction histidine kinase 1065 cds-WP_002208682.1 CDS COG0226 2194944 2195822 + [P] ABC-type phosphate transport system, periplasmic component 1066 brnQ CDS COG1114 2196296 2197615 + [E] Branched-chain amino acid permeases proY CDS COG1113 2197691 2199082 + [E] Gamma-aminobutyrate permease and related permeases 1067 malZ CDS COG0366 2199643 2201472 + [G] Glycosidases 1068 cds-WP_002222306.1 CDS NA 2201469 2201651 - NA 1069 cds-WP_002208677.1 CDS COG3967 2201627 2202307 + [M] Short-chain dehydrogenase involved in D-alanine esterification 1070 ggt CDS COG0405 2202515 2204280 - [E] Gamma-glutamyltransferase 1071 tnpA_30 CDS COG1943 2204708 2205166 - [L] Transposase and inactivated derivatives 1072 cds-WP_002208675.1 CDS COG0450 2205381 2205983 - [O] Peroxiredoxin 1073 cds-WP_002216927.1 CDS COG3124 2206282 2206863 - [S] Uncharacterized protein conserved in bacteria 1074 queA CDS COG0809 2207066 2208136 + [J] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) tgt CDS COG0343 2208229 2209353 + [J] Queuine/archaeosine tRNA-ribosyltransferase yajC CDS COG1862 2209465 2209800 + [U] Preprotein translocase subunit YajC secD CDS COG0342 2209828 2211675 + [U] Preprotein translocase subunit SecD secF CDS COG0341 2211686 2212654 + [U] Preprotein translocase subunit SecF 1075 tnpA_31 CDS COG1943 2212861 2213319 + [L] Transposase and inactivated derivatives 1076 cds-WP_002217139.1 CDS ROG5886 2213617 2214312 + NA cds-WP_002217141.1 CDS ROG0078 2214345 2214938 + NA 1077 nrdR CDS COG1327 2215009 2215458 + [K] Predicted transcriptional regulator, consists of a ribD CDS COG1985 2215608 2216717 + [H] Pyrimidine reductase, riboflavin biosynthesis ribE CDS COG0054 2216853 2217323 + [H] Riboflavin synthase beta-chain nusB CDS COG0781 2217344 2217760 + [K] Transcription termination factor thiL CDS COG0611 2218001 2218990 + [H] Thiamine monophosphate kinase pgpA CDS COG1267 2218983 2219468 + [I] Phosphatidylglycerophosphatase A and related proteins 1078 tnpA_32 CDS COG1943 2219682 2220140 + [L] Transposase and inactivated derivatives 1079 dxs CDS COG1154 2220319 2222178 - [HI] Deoxyxylulose-5-phosphate synthase ispA CDS COG0142 2222334 2223254 - [H] Geranylgeranyl pyrophosphate synthase xseB CDS COG1722 2223259 2223513 - [L] Exonuclease VII small subunit 1080 thiI CDS COG0301 2223863 2225314 + [H] Thiamine biosynthesis ATP pyrophosphatase 1081 yajL CDS COG0693 2225382 2225972 - [R] Putative intracellular protease/amidase panE CDS COG1893 2225935 2226846 - [H] Ketopantoate reductase 1082 cds-WP_002208655.1 CDS COG1666 2227078 2227569 + [S] Uncharacterized protein conserved in bacteria 1083 cds-WP_002216717.1 CDS ROG2472 2227693 2229057 - NA 1084 cyoE CDS COG0109 2229541 2230428 - [O] Polyprenyltransferase (cytochrome oxidase assembly factor) cds-WP_002208652.1 CDS COG3125 2230442 2230774 - [C] Heme/copper-type cytochrome/quinol oxidase, subunit 4 cds-WP_002208651.1 CDS COG1845 2230774 2231388 - [C] Heme/copper-type cytochrome/quinol oxidase, subunit 3 cyoB CDS COG0843 2231378 2233369 - [C] Heme/copper-type cytochrome/quinol oxidases, subunit 1 cyoA CDS COG1622 2233374 2234330 - [C] Heme/copper-type cytochrome/quinol oxidases, subunit 2 1085 cds-WP_002208648.1 CDS ROG0103 2234700 2235467 - NA 1086 ampG CDS NA 2235759 2237237 - NA 1087 cds-WP_002208646.1 CDS COG3056 2237355 2237933 - [M] Uncharacterized lipoprotein 1088 bolA CDS COG0271 2238282 2238602 + [T] Stress-induced morphogen (activity unknown) 1089 tig CDS COG0544 2239019 2240323 + [O] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 1090 clpP CDS COG0740 2240785 2241408 + [OU] Protease subunit of ATP-dependent Clp proteases clpX CDS COG1219 2241614 2242885 + [O] ATP-dependent protease Clp, ATPase subunit lon CDS COG0466 2243080 2245434 + [O] ATP-dependent Lon protease, bacterial type 1091 hupB CDS COG0776 2245652 2245924 + [L] Bacterial nucleoid DNA-binding protein 1092 ppiD CDS COG0760 2246225 2248111 + [O] Parvulin-like peptidyl-prolyl isomerase 1093 cds-WP_002208637.1 CDS COG1555 2248251 2248697 + [L] DNA uptake protein and related DNA-binding 1094 cds-WP_002208636.1 CDS COG0824 2249051 2249458 + [R] Predicted thioesterase 1095 queC CDS COG0603 2249544 2250242 - [R] Predicted PP-loop superfamily ATPase 1096 cds-WP_002208633.1 CDS COG4533 2250507 2252210 - [R] ABC-type uncharacterized transport system, periplasmic component 1097 cof CDS COG0561 2252315 2253136 + [R] Predicted hydrolases of the HAD superfamily 1098 cds-WP_002208631.1 CDS COG0031 2253348 2254388 - [E] Cysteine synthase 1099 cds-WP_002208630.1 CDS COG1522 2254514 2254975 + [K] Transcriptional regulators cds-WP_002208629.1 CDS COG1132 2255077 2256843 + [V] ABC-type multidrug transport system, ATPase and cds-WP_002208628.1 CDS COG1132 2256836 2258659 + [V] ABC-type multidrug transport system, ATPase and 1100 glnK CDS COG0347 2259069 2259407 + [E] Nitrogen regulatory protein PII amtB CDS COG0004 2259447 2260736 + [P] Ammonia permease 1101 tesB CDS COG1946 2260996 2261856 - [I] Acyl-CoA thioesterase 1102 cds-WP_002208624.1 CDS COG3126 2262113 2262634 + [S] Uncharacterized protein conserved in bacteria 1103 cds-WP_002208623.1 CDS COG3695 2262770 2263159 - [L] Predicted methylated DNA-protein cysteine methyltransferase 1104 ymoA CDS NA 2264047 2264250 - NA tomB CDS ROG0634 2264299 2264667 - NA 1105 cds-WP_002208619.1 CDS COG4499 2264826 2265179 - [S] Predicted membrane protein 1106 ykgO CDS COG0257 2266053 2266196 - [J] Ribosomal protein L36 cds-WP_002208617.1 CDS COG0254 2266212 2266472 - [J] Ribosomal protein L31 1107 acrB CDS COG0841 2266658 2269810 - [V] Cation/multidrug efflux pump cds-WP_002208615.1 CDS COG0845 2269827 2271014 - [M] Membrane-fusion protein 1108 acrR CDS COG1309 2271159 2271815 + [K] Transcriptional regulator cds-WP_002208613.1 CDS COG1553 2271828 2272181 + [P] Uncharacterized conserved protein involved in intracellular 1109 mscK CDS COG3264 2272478 2275840 + [M] Small-conductance mechanosensitive channel 1110 rsmS CDS NA 2276180 2276335 - NA 1111 priC CDS COG3923 2276506 2277042 - [L] Primosomal replication protein N'' 1112 cds-A1122_RS10485 CDS COG2832 2277243 2277518 + [S] Uncharacterized protein conserved in bacteria 1113 istA_24 CDS COG4584 2277603 2278625 + [L] Transposase and inactivated derivatives istB_24 CDS COG1484 2278622 2279404 + [L] DNA replication protein 1114 apt CDS COG0503 2279821 2280384 + [F] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 1115 dnaX CDS COG2812 2281040 2283016 + [L] DNA polymerase III, gamma/tau subunits cds-WP_002208604.1 CDS COG0718 2283072 2283404 + [S] Uncharacterized protein conserved in bacteria recR CDS COG0353 2283404 2284009 + [L] Recombinational DNA repair protein (RecF pathway) 1116 htpG CDS COG0326 2284207 2286075 + [O] Molecular chaperone, HSP90 family 1117 adk CDS COG0563 2286302 2286946 + [F] Adenylate kinase and related kinases hemH CDS COG0276 2287036 2287998 + [H] Protoheme ferro-lyase (ferrochelatase) 1118 cds-WP_002208598.1 CDS COG0543 2288596 2289585 + [HC] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases rfbF CDS COG1208 2289623 2290396 + [MJ] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation cds-WP_002215986.1 CDS NA 2290401 2290544 + NA rfbG CDS COG0451 2290576 2291475 + [MG] Nucleoside-diphosphate-sugar epimerases rfbH CDS COG0399 2291493 2292806 + [M] Predicted pyridoxal phosphate-dependent enzyme apparently involved cds-WP_002208595.1 CDS COG0451 2292843 2293700 + [MG] Nucleoside-diphosphate-sugar epimerases cds-WP_002208594.1 CDS COG1232 2293701 2294984 + [H] Protoporphyrinogen oxidase 1119 wzx CDS COG3167 2295058 2296401 + [NU] Tfp pilus assembly protein PilO cds-WP_002215988.1 CDS COG1216 2296412 2297125 + [R] Predicted glycosyltransferases 1120 cds-WP_002208592.1 CDS NA 2297505 2298647 + NA wzy CDS NA 2298644 2299865 + NA 1121 cds-WP_002208591.1 CDS COG0438 2300114 2301127 + [M] Glycosyltransferase gmd CDS COG1089 2301143 2302265 + [M] GDP-D-mannose dehydratase cds-A1122_RS10600 CDS COG1091 2302271 2303235 + [M] dTDP-4-dehydrorhamnose reductase cds-WP_002208590.1 CDS COG0836 2303527 2304933 + [M] Mannose-1-phosphate guanylyltransferase cds-WP_002208589.1 CDS COG0463 2304936 2305679 + [M] Glycosyltransferases involved in cell wall biogenesis cpsG CDS COG1109 2305684 2307057 + [G] Phosphomannomutase wzz(fepE) CDS COG3765 2307105 2308256 + [M] Chain length determinant protein 1122 cds-WP_002208586.1 CDS COG0524 2308460 2309764 + [G] Sugar kinases, ribokinase family 1123 ybaL CDS COG4651 2309861 2311552 - [P] Kef-type K+ transport system, predicted NAD-binding 1124 cds-WP_002208584.1 CDS NA 2311787 2313001 - NA 1125 ushA CDS COG0737 2313283 2314938 + [F] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 1126 cds-WP_002208583.1 CDS ROG3601 2315042 2315281 - NA 1127 cds-A1122_RS24300 CDS NA 2315368 2315439 - NA 1128 ybaK CDS COG2606 2315618 2316097 - [S] Uncharacterized conserved protein 1129 cds-WP_002208580.1 CDS COG3735 2316361 2317170 - [S] Uncharacterized protein conserved in bacteria 1130 copA CDS COG2217 2317691 2320576 - [P] Cation transport ATPase 1131 cueR CDS COG0789 2320783 2321202 + [K] Predicted transcriptional regulators 1132 cds-WP_002208577.1 CDS COG1585 2321311 2321760 - [OU] Membrane protein implicated in regulation of cds-WP_002208576.1 CDS COG0330 2321763 2322677 - [O] Membrane protease subunits, stomatin/prohibitin homologs 1133 cds-WP_002208575.1 CDS COG3118 2322872 2323741 - [O] Thioredoxin domain-containing protein 1134 cds-WP_002208574.1 CDS COG0300 2323818 2324594 - [R] Short-chain dehydrogenases of various substrate specificities 1135 tesA CDS COG2755 2324981 2325616 - [E] Lysophospholipase L1 and related esterases 1136 ybbA CDS COG4181 2325587 2326273 + [Q] Predicted ABC-type transport system involved in ybbP CDS COG3127 2326270 2328699 + [Q] Predicted ABC-type transport system involved in 1137 purK CDS COG0026 2328743 2329807 - [F] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) purE CDS COG0041 2329804 2330328 - [F] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 1138 cds-WP_002208568.1 CDS COG2908 2330624 2331346 - [S] Uncharacterized protein conserved in bacteria ppiB CDS COG0652 2331357 2331851 - [O] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin 1139 cysS CDS COG0215 2332062 2333447 + [J] Cysteinyl-tRNA synthetase 1140 tnpA_33 CDS COG1943 2333794 2334252 + [L] Transposase and inactivated derivatives 1141 hda CDS NA 2334440 2335147 + NA 1142 arsC CDS COG1393 2335359 2335715 - [P] Arsenate reductase and related proteins, glutaredoxin 1143 cds-WP_002217569.1 CDS COG4783 2335822 2337306 - [R] Putative Zn-dependent protease, contains TPR repeats 1144 cds-WP_002208563.1 CDS COG0628 2337637 2338701 + [R] Predicted permease 1145 cds-WP_002208561.1 CDS NA 2339301 2339996 + NA cds-WP_002217563.1 CDS NA 2340000 2340419 + NA 1146 bcp CDS COG1225 2340663 2341133 - [O] Peroxiredoxin cds-WP_002227068.1 CDS COG2716 2341136 2341705 - [E] Glycine cleavage system regulatory protein 1147 dapA CDS COG0329 2341870 2342751 + [EM] Dihydrodipicolinate synthase/N-acetylneuraminate lyase bamC CDS COG3317 2342769 2343827 + [M] Uncharacterized lipoprotein 1148 tnpA_34 CDS COG1943 2344002 2344460 + [L] Transposase and inactivated derivatives 1149 purC CDS COG0152 2344608 2345321 + [F] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 1150 cds-WP_002208554.1 CDS COG2321 2345540 2346406 + [R] Predicted metalloprotease 1151 cds-WP_002208553.1 CDS COG2707 2346500 2346952 + [S] Predicted membrane protein cds-WP_002208552.1 CDS COG1444 2346954 2349053 + [R] Predicted P-loop ATPase fused to an cds-A1122_RS24305 CDS COG0524 2349001 2349123 + [G] Sugar kinases, ribokinase family 1152 cds-WP_002208551.1 CDS NA 2349258 2349452 - NA 1153 cds-WP_002208550.1 CDS COG1876 2349520 2350197 - [M] D-alanyl-D-alanine carboxypeptidase dapE CDS COG0624 2350194 2351321 - [E] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases cds-WP_002208548.1 CDS COG1393 2351323 2351721 - [P] Arsenate reductase and related proteins, glutaredoxin 1154 cds-WP_002208547.1 CDS COG0457 2351881 2352354 - [R] FOG: TPR repeat 1155 cds-WP_002208546.1 CDS COG1840 2352665 2353753 + [P] ABC-type Fe3+ transport system, periplasmic component cds-WP_002208545.1 CDS COG1178 2353848 2355617 + [P] ABC-type Fe3+ transport system, permease component cds-WP_002208544.1 CDS COG3842 2355610 2356680 + [E] ABC-type spermidine/putrescine transport systems, ATPase components cds-WP_002214539.1 CDS NA 2356694 2356900 + NA 1156 cds-WP_002378486.1 CDS COG3119 2357161 2358831 + [P] Arylsulfatase A and related enzymes cds-WP_002208542.1 CDS COG0641 2358889 2360064 + [R] Arylsulfatase regulator (Fe-S oxidoreductase) 1157 cds-WP_002208541.1 CDS COG1988 2360818 2361366 - [R] Predicted membrane-bound metal-dependent hydrolases 1158 cds-WP_002208540.1 CDS NA 2361655 2362239 - NA 1159 acrD CDS COG0841 2362470 2365601 - [V] Cation/multidrug efflux pump 1160 cds-WP_002208538.1 CDS COG4519 2366016 2366294 + [S] Uncharacterized protein conserved in bacteria 1161 cds-WP_002208537.1 CDS COG2197 2366307 2366936 - [TK] Response regulator containing a CheY-like receiver 1162 napF CDS COG1145 2367769 2368272 + [C] Ferredoxin napD CDS COG3062 2368262 2368528 + [P] Uncharacterized protein involved in formation of napA CDS COG0243 2368525 2371017 + [C] Anaerobic dehydrogenases, typically selenocysteine-containing napB CDS COG3043 2371112 2371567 + [C] Nitrate reductase cytochrome c-type subunit napC CDS COG3005 2371592 2372194 + [C] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c 1163 nudK CDS COG0494 2372378 2372974 + [LR] NTP pyrophosphohydrolases including oxidative damage repair 1164 maeB CDS COG0281 2373170 2375455 + [C] Malic enzyme 1165 cds-WP_002208527.1 CDS COG1671 2375606 2376064 - [S] Uncharacterized protein conserved in bacteria hemF CDS COG0408 2376064 2376993 - [H] Coproporphyrinogen III oxidase 1166 cds-WP_002208525.1 CDS COG0454 2377276 2377701 + [KR] Histone acetyltransferase HPA2 and related acetyltransferases 1167 cds-WP_002208524.1 CDS NA 2378174 2378590 + NA 1168 yapL CDS COG3468 2378682 2380961 - [MU] Type V secretory pathway, adhesin AidA 1169 cds-WP_002208522.1 CDS COG3111 2381448 2381861 - [S] Uncharacterized conserved protein 1170 cds-WP_002208521.1 CDS ROG6572 2382220 2382831 + NA 1171 cds-WP_002208519.1 CDS COG2837 2383009 2383908 + [P] Predicted iron-dependent peroxidase 1172 cds-WP_002208518.1 CDS COG0329 2384006 2384899 - [EM] Dihydrodipicolinate synthase/N-acetylneuraminate lyase cds-WP_016255872.1 CDS COG3010 2384962 2385708 - [G] Putative N-acetylmannosamine-6-phosphate epimerase 1173 cds-WP_002229548.1 CDS COG4886 2385869 2386378 - [S] Leucine-rich repeat (LRR) protein cds-WP_337442321.1 CDS COG4886 2386431 2386559 - [S] Leucine-rich repeat (LRR) protein cds-A1122_RS24315 CDS COG4886 2386575 2386997 - [S] Leucine-rich repeat (LRR) protein 1174 cds-WP_002208516.1 CDS COG1940 2387266 2388138 + [KG] Transcriptional regulator/sugar kinase nanQ CDS COG2731 2388220 2388690 + [G] Beta-galactosidase, beta subunit cds-WP_002208514.1 CDS COG1737 2388879 2389757 + [K] Transcriptional regulators 1175 cds-WP_002208513.1 CDS COG0477 2390362 2391894 + [GEPR] Permeases of the major facilitator superfamily 1176 cds-WP_002208512.1 CDS COG4150 2392209 2393246 + [P] ABC-type sulfate transport system, periplasmic component cysT CDS COG0555 2393246 2394079 + [O] ABC-type sulfate transport system, permease component cysW CDS COG4208 2394079 2394954 + [P] ABC-type sulfate transport system, permease component cysA CDS COG1118 2394944 2396035 + [P] ABC-type sulfate/molybdate transport systems, ATPase component cysM CDS COG0031 2396206 2397084 + [E] Cysteine synthase 1177 cds-WP_002208507.1 CDS COG4886 2397329 2398561 + [S] Leucine-rich repeat (LRR) protein 1178 cds-A1122_RS24320 CDS NA 2398771 2398947 + NA 1179 cds-WP_002208506.1 CDS COG0745 2398942 2399649 - [TK] Response regulators consisting of a CheY-like cds-WP_002208505.1 CDS COG0642 2399646 2401190 - [T] Signal transduction histidine kinase 1180 cds-WP_002208502.1 CDS COG2304 2401423 2402841 - [R] Uncharacterized protein containing a von Willebrand 1181 cds-WP_002208500.1 CDS COG1168 2403549 2404730 + [E] Bifunctional PLP-dependent enzyme with beta-cystathionase and cds-A1122_RS11090 CDS NA 2404764 2405983 + NA 1182 cds-WP_002215023.1 CDS ROG8459 2406126 2406323 + NA cds-WP_002208498.1 CDS COG0591 2406320 2407780 + [ER] Na+/proline symporter 1183 cds-WP_002208497.1 CDS COG0446 2407840 2409486 + [R] Uncharacterized NAD(FAD)-dependent dehydrogenases 1184 cds-WP_002208496.1 CDS COG0577 2409741 2411777 - [V] ABC-type antimicrobial peptide transport system, permease cds-WP_002208495.1 CDS COG0845 2411781 2412986 - [M] Membrane-fusion protein 1185 cds-WP_002208494.1 CDS COG0745 2413174 2413857 + [TK] Response regulators consisting of a CheY-like cds-WP_002208493.1 CDS COG2205 2413883 2415232 + [T] Osmosensitive K+ channel histidine kinase 1186 tnpA_35 CDS COG1943 2415502 2415960 + [L] Transposase and inactivated derivatives 1187 crr CDS COG2190 2416103 2416612 - [G] Phosphotransferase system IIA components ptsI CDS COG1080 2416661 2418388 - [G] Phosphoenolpyruvate-protein kinase (PTS system EI component ptsH CDS COG1925 2418437 2418694 - [G] Phosphotransferase system, HPr-related proteins 1188 cysK CDS COG0031 2419193 2420161 - [E] Cysteine synthase 1189 cysZ CDS COG2981 2420318 2421052 - [E] Uncharacterized protein involved in cysteine biosynthesis 1190 zipA CDS COG3115 2421301 2422287 + [D] Cell division protein ligA CDS COG0272 2422378 2424390 + [L] NAD-dependent DNA ligase (contains BRCT domain cds-WP_002213369.1 CDS COG3530 2424410 2424625 + [S] Uncharacterized protein conserved in bacteria 1191 cds-WP_002213372.1 CDS ROG0045 2424726 2425073 - NA 1192 cds-WP_002213374.1 CDS COG3575 2425205 2425810 - [S] Uncharacterized protein conserved in bacteria 1193 rna-A1122_RS11190 tRNA NA 2426005 2426080 - NA rna-A1122_RS11195 tRNA NA 2426158 2426233 - NA 1194 tnpA_36 CDS COG1943 2426524 2426982 - [L] Transposase and inactivated derivatives 1195 gltX CDS COG0008 2427175 2428590 - [J] Glutamyl- and glutaminyl-tRNA synthetases 1196 rna-A1122_RS11210 tRNA NA 2428865 2428940 + NA rna-A1122_RS11215 tRNA NA 2428977 2429052 + NA rna-A1122_RS11220 tRNA NA 2429097 2429172 + NA rna-A1122_RS11225 tRNA NA 2429372 2429447 + NA 1197 cds-WP_002211622.1 CDS COG1972 2429824 2431008 - [F] Nucleoside permease 1198 cds-WP_002211621.1 CDS COG1914 2431443 2432672 + [P] Mn2+ and Fe2+ transporters of the 1199 cds-WP_128647004.1 CDS NA 2432765 2433136 - NA 1200 cds-WP_002211618.1 CDS COG0667 2433349 2434338 - [C] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 1201 cds-WP_002211617.1 CDS COG0583 2434474 2435352 - [K] Transcriptional regulator 1202 cds-WP_002211616.1 CDS COG4125 2435455 2435931 + [S] Predicted membrane protein 1203 glk CDS COG0837 2436112 2437083 + [G] Glucokinase 1204 cds-WP_002211614.1 CDS NA 2437161 2438408 - NA 1205 alaC CDS COG0436 2438674 2439909 + [E] Aspartate/tyrosine/aromatic aminotransferase 1206 cds-WP_002211611.1 CDS COG3038 2440154 2440678 + [C] Cytochrome B561 1207 cds-WP_002211610.1 CDS ROG1293 2440773 2441204 - NA 1208 cds-WP_002215847.1 CDS COG1462 2441794 2442465 + [M] Uncharacterized protein involved in formation of cds-WP_002215846.1 CDS COG4259 2442492 2442848 + [S] Uncharacterized protein conserved in bacteria cds-WP_002211607.1 CDS COG4380 2442845 2443501 + [S] Uncharacterized protein conserved in bacteria 1209 cds-WP_002211606.1 CDS COG1145 2443747 2444316 - [C] Ferredoxin cds-WP_002228419.1 CDS COG3381 2444313 2444909 - [R] Uncharacterized component of anaerobic dehydrogenases cds-WP_002211604.1 CDS COG3302 2445267 2446043 - [R] DMSO reductase anchor subunit cds-WP_002211603.1 CDS COG0437 2446045 2446662 - [C] Fe-S-cluster-containing hydrogenase components 1 cds-WP_002211602.1 CDS COG0243 2446674 2449100 - [C] Anaerobic dehydrogenases, typically selenocysteine-containing 1210 cds-WP_002211601.1 CDS NA 2449931 2450779 + NA 1211 cds-WP_002354621.1 CDS COG3157 2451009 2451488 - [S] Hemolysin-coregulated protein (uncharacterized) 1212 cds-WP_002211599.1 CDS COG4331 2451955 2452479 + [S] Predicted membrane protein 1213 cds-WP_002211598.1 CDS COG1118 2452552 2453601 - [P] ABC-type sulfate/molybdate transport systems, ATPase component cds-WP_002215840.1 CDS COG1178 2453598 2455184 - [P] ABC-type Fe3+ transport system, permease component cds-WP_002211596.1 CDS COG1840 2455240 2456259 - [P] ABC-type Fe3+ transport system, periplasmic component 1214 mltB CDS COG2951 2456588 2457682 + [M] Membrane-bound lytic murein transglycosylase B 1215 cds-WP_002211590.1 CDS COG2771 2458937 2459539 + [K] DNA-binding HTH domain-containing proteins 1216 cds-WP_002215321.1 CDS COG5435 2459897 2460379 - [S] Uncharacterized conserved protein cds-WP_002211588.1 CDS COG2885 2460376 2462058 - [M] Outer membrane protein and related peptidoglycan-associated cds-WP_002211587.1 CDS NA 2462059 2462742 - NA cds-WP_002211586.1 CDS NA 2462739 2464076 - NA cds-WP_002215319.1 CDS COG3539 2464116 2465147 - [NU] P pilus assembly protein, pilin FimA cds-WP_002211584.1 CDS COG3515 2465154 2466335 - [S] Uncharacterized protein conserved in bacteria tssG_3 CDS COG3520 2466434 2467459 - [S] Uncharacterized protein conserved in bacteria tssF_3 CDS COG3519 2467459 2469339 - [S] Uncharacterized protein conserved in bacteria 1217 tssH_4 CDS COG0542 2470122 2472797 + [O] ATPases with chaperone activity, ATP-binding subunit 1218 cds-WP_002211580.1 CDS COG3539 2472998 2473543 + [NU] P pilus assembly protein, pilin FimA 1219 cds-WP_002365803.1 CDS NA 2473540 2473905 - NA 1220 cds-WP_002370423.1 CDS COG3121 2473787 2474461 + [NU] P pilus assembly protein, chaperone PapD cds-WP_002215157.1 CDS COG3188 2474589 2476139 + [NU] P pilus assembly protein, porin PapC 1221 cds-WP_002209743.1-3 CDS COG3328 2476161 2477369 - [L] Transposase and inactivated derivatives 1222 cds-WP_002211577.1 CDS COG3188 2477394 2478584 + [NU] P pilus assembly protein, porin PapC cds-WP_002211576.1 CDS COG3539 2478569 2479177 + [NU] P pilus assembly protein, pilin FimA 1223 tssB_4 CDS COG3516 2479282 2479806 + [S] Uncharacterized protein conserved in bacteria tssC_4 CDS COG3517 2479830 2481332 + [S] Uncharacterized protein conserved in bacteria cds-WP_002211573.1 CDS COG3157 2481658 2482143 + [S] Hemolysin-coregulated protein (uncharacterized) tssJ_3 CDS COG3521 2482417 2482956 + [S] Uncharacterized protein conserved in bacteria tssK_4 CDS COG3522 2482960 2484309 + [S] Uncharacterized protein conserved in bacteria cds-A1122_RS11465 CDS COG3455 2484306 2484902 + [S] Uncharacterized protein conserved in bacteria 1224 istA_25 CDS COG4584 2484988 2486010 + [L] Transposase and inactivated derivatives istB_25 CDS COG1484 2486007 2486789 + [L] DNA replication protein 1225 cds-WP_002215253.1 CDS NA 2487156 2487461 - NA 1226 cds-WP_002209765.1 CDS NA 2487558 2487959 - NA cds-WP_002209766.1 CDS COG0671 2487941 2489260 - [I] Membrane-associated phospholipid phosphatase cds-WP_002209767.1 CDS COG2267 2489253 2491016 - [I] Lysophospholipase cds-WP_002209768.1 CDS COG0204 2491013 2491645 - [I] 1-acyl-sn-glycerol-3-phosphate acyltransferase cds-WP_002209769.1 CDS COG4589 2491655 2492584 - [R] Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase cds-WP_002209770.1 CDS COG0558 2492577 2493179 - [I] Phosphatidylglycerophosphate synthase cds-A1122_RS24660 CDS COG2146 2493212 2493352 - [PR] Ferredoxin subunits of nitrite reductase and 1227 cds-WP_002354559.1 CDS NA 2493579 2493785 - NA 1228 cds-A1122_RS22510 CDS NA 2493976 2494245 + NA 1229 cds-WP_002215266.1 CDS NA 2494358 2494696 + NA 1230 cds-WP_002228356.1 CDS NA 2494832 2495329 + NA 1231 cds-WP_002215268.1 CDS NA 2495443 2495643 + NA 1232 cds-WP_002215270.1 CDS COG3311 2495902 2496084 + [K] Predicted transcriptional regulator 1233 rna-A1122_RS11550 tRNA NA 2496148 2496224 - NA 1234 folD CDS COG0190 2496439 2497305 + [H] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase ybcJ CDS COG2501 2497320 2497532 + [S] Uncharacterized conserved protein 1235 tnpA_37 CDS COG1943 2497679 2498137 - [L] Transposase and inactivated derivatives 1236 upp CDS COG0035 2498313 2498939 - [F] Uracil phosphoribosyltransferase 1237 purM CDS COG0150 2499336 2500379 + [F] Phosphoribosylaminoimidazole (AIR) synthetase purN CDS COG0299 2500494 2501132 + [F] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 1238 speG CDS COG1670 2501361 2501906 + [J] Acetyltransferases, including N-acetylases of ribosomal proteins 1239 fliB CDS COG0727 2502000 2503189 - [R] Predicted Fe-S-cluster oxidoreductase 1240 pstB_2 CDS COG1117 2503431 2504243 - [P] ABC-type phosphate transport system, ATPase component pstA_2 CDS COG4985 2504271 2505983 - [P] ABC-type phosphate transport system, auxiliary component cds-WP_002214670.1 CDS COG4590 2505983 2508214 - [R] ABC-type uncharacterized transport system, permease component 1241 ppk1 CDS COG0855 2508485 2510548 + [P] Polyphosphate kinase ppx CDS COG0248 2510559 2512118 + [FP] Exopolyphosphatase 1242 cds-WP_012303868.1 CDS NA 2512254 2512442 + NA mgtE CDS COG2239 2512494 2513969 + [P] Mg/Co/Ni transporter MgtE (contains CBS domain) 1243 yegD CDS COG0849 2514109 2515461 + [D] Actin-like ATPase involved in cell division 1244 cds-WP_002209786.1 CDS COG1177 2515733 2516581 - [E] ABC-type spermidine/putrescine transport system, permease component cds-WP_002209787.1 CDS COG1176 2516643 2517908 - [E] ABC-type spermidine/putrescine transport system, permease component cds-WP_002209788.1 CDS COG0687 2517955 2518983 - [E] Spermidine/putrescine-binding periplasmic protein cds-WP_002209789.1 CDS COG0160 2519036 2520325 - [E] 4-aminobutyrate aminotransferase and related aminotransferases 1245 cds-WP_002209790.1 CDS COG1167 2520507 2522012 + [KE] Transcriptional regulators containing a DNA-binding HTH 1246 cds-WP_002209791.1 CDS COG3842 2522395 2523480 + [E] ABC-type spermidine/putrescine transport systems, ATPase components 1247 cds-WP_002214676.1 CDS COG0845 2523844 2525178 + [M] Membrane-fusion protein cds-WP_002209793.1 CDS COG0841 2525178 2528336 + [V] Cation/multidrug efflux pump mdtC CDS COG0841 2528333 2531407 + [V] Cation/multidrug efflux pump cds-WP_002209795.1 CDS NA 2531441 2532838 + NA baeS CDS COG5002 2532872 2534253 + [T] Signal transduction histidine kinase baeR CDS COG0745 2534263 2534982 + [TK] Response regulators consisting of a CheY-like 1248 cds-WP_002209797.1 CDS COG3422 2535119 2535457 + [S] Uncharacterized conserved protein 1249 yegQ CDS COG0826 2535732 2537126 + [O] Collagenase and related proteases 1250 yegS CDS COG1597 2537762 2538652 + [IR] Sphingosine kinase and enzymes related to 1251 cds-WP_002209800.1 CDS ROG7878 2538919 2539428 - NA 1252 cds-WP_002228393.1 CDS NA 2539659 2539829 + NA cds-WP_002232352.1 CDS NA 2539801 2540547 + NA 1253 thiD CDS COG0351 2540609 2541409 - [H] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 1254 cds-WP_002209803.1 CDS COG1953 2541931 2542398 + [FH] Cytosine/uracil/thiamine/allantoin permeases cds-WP_002209804.1 CDS NA 2542457 2542735 + NA 1255 cds-WP_002209743.1-4 CDS COG3328 2542747 2543955 - [L] Transposase and inactivated derivatives 1256 cds-WP_002209805.1 CDS COG0843 2544046 2544681 + [C] Heme/copper-type cytochrome/quinol oxidases, subunit 1 cds-WP_002216980.1 CDS NA 2544678 2545073 + NA 1257 cds-WP_002216979.1 CDS NA 2545137 2545532 + NA cds-WP_002415472.1 CDS ROG3928 2545594 2545989 + NA 1258 cds-WP_002216975.1 CDS NA 2546053 2546451 + NA cds-WP_002209806.1 CDS COG3157 2546475 2546954 + [S] Hemolysin-coregulated protein (uncharacterized) 1259 tnpA_38 CDS COG1943 2547114 2547572 - [L] Transposase and inactivated derivatives 1260 guaA CDS COG0519 2547947 2549524 - [F] GMP synthase, PP-ATPase domain/subunit guaB CDS COG0516 2549704 2551167 - [F] IMP dehydrogenase/GMP reductase 1261 xseA CDS COG1570 2551337 2552716 + [L] Exonuclease VII, large subunit 1262 cds-WP_002209811.1 CDS NA 2552825 2553049 - NA cds-WP_002209812.1 CDS COG0679 2553098 2554054 - [R] Predicted permeases 1263 der CDS COG1160 2554401 2555888 - [R] Predicted GTPases 1264 tnpA_39 CDS COG1943 2556069 2556527 - [L] Transposase and inactivated derivatives 1265 bamB CDS COG1520 2556746 2557927 - [S] FOG: WD40-like repeat cds-WP_002209815.1 CDS COG2976 2557939 2558574 - [S] Uncharacterized protein conserved in bacteria hisS CDS COG0124 2558588 2559862 - [J] Histidyl-tRNA synthetase ispG CDS COG0821 2560071 2561198 - [I] Enzyme involved in the deoxyxylulose pathway rodZ CDS COG1426 2561260 2562297 - [S] Uncharacterized protein conserved in bacteria pilW CDS COG3063 2562287 2563036 - [NU] Tfp pilus assembly protein PilF cds-WP_002209820.1 CDS COG0820 2563190 2564386 - [R] Predicted Fe-S-cluster redox enzyme 1266 ndk CDS COG0105 2564648 2565076 - [F] Nucleoside diphosphate kinase 1267 cds-WP_002215515.1 CDS ROG7133 2565403 2567823 - NA 1268 cds-WP_154080877.1 CDS COG3468 2568513 2572685 + [MU] Type V secretory pathway, adhesin AidA 1269 yapB CDS COG3468 2573243 2576755 + [MU] Type V secretory pathway, adhesin AidA 1270 cds-WP_071525548.1 CDS NA 2576766 2576891 - NA 1271 sseB CDS ROG1492 2577025 2577978 - NA 1272 pepB CDS COG0260 2578057 2579355 - [E] Leucyl aminopeptidase 1273 iscX CDS COG2975 2579495 2579695 - [S] Uncharacterized protein conserved in bacteria fdx CDS COG0633 2579725 2580060 - [C] Ferredoxin hscA CDS COG0443 2580063 2582015 - [O] Molecular chaperone hscB CDS COG1076 2582258 2582782 - [O] DnaJ-domain-containing proteins 1 iscA CDS COG0316 2582893 2583216 - [S] Uncharacterized conserved protein iscU CDS COG0822 2583486 2583872 - [C] NifU homolog involved in Fe-S cluster cds-WP_002209836.1 CDS COG1104 2583903 2585132 - [E] Cysteine sulfinate desulfinase/cysteine desulfurase and related iscR CDS COG1959 2585186 2585680 - [K] Predicted transcriptional regulator trmJ CDS COG0565 2585836 2586609 - [J] rRNA methylase 1274 suhB CDS COG0483 2586728 2587531 + [G] Archaeal fructose-1,6-bisphosphatase and related enzymes of 1275 tnpA_40 CDS COG1943 2587735 2588193 + [L] Transposase and inactivated derivatives 1276 cds-WP_002217028.1 CDS COG2215 2588340 2589362 - [R] ABC-type uncharacterized transport system, permease component cds-WP_002213310.1 CDS COG3683 2589353 2590027 - [R] ABC-type uncharacterized transport system, periplasmic component 1277 csiE CDS COG3711 2590169 2591530 + [K] Transcriptional antiterminator 1278 cds-WP_002213316.1 CDS NA 2591527 2592684 - NA 1279 ail CDS COG3637 2593036 2593584 - [M] Opacity protein and related surface antigens 1280 cds-WP_002223388.1 CDS NA 2593694 2593876 - NA 1281 glyA CDS COG0112 2594028 2595281 - [E] Glycine/serine hydroxymethyltransferase 1282 hmpA CDS COG1017 2595822 2597012 + [C] Hemoglobin-like flavoprotein 1283 yhfZ CDS ROG3679 2597476 2598376 + NA 1284 glnB CDS COG0347 2598545 2598883 - [E] Nitrogen regulatory protein PII cds-WP_002211555.1 CDS COG0171 2598898 2600520 - [H] NAD synthase 1285 glrR CDS COG2204 2600680 2602017 - [T] Response regulator containing CheY-like receiver, AAA-type qseG CDS NA 2601980 2602975 - NA 1286 cds-WP_002216114.1 CDS COG2205 2603051 2604487 - [T] Osmosensitive K+ channel histidine kinase 1287 tnpA_41 CDS COG1943 2604708 2605166 - [L] Transposase and inactivated derivatives cds-WP_002216113.1 CDS NA 2605156 2605380 - NA 1288 cds-WP_002211559.1 CDS NA 2606391 2606951 + NA 1289 cds-WP_002211560.1 CDS NA 2607403 2607852 + NA 1290 cds-WP_032487261.1 CDS NA 2608160 2608267 + NA 1291 purL CDS COG0046 2608264 2612154 - [F] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 1292 mltF CDS COG4623 2612470 2613930 + [M] Predicted soluble lytic transglycosylase fused to 1293 tadA CDS COG0590 2614039 2614641 - [FJ] Cytosine/adenosine deaminases 1294 yfhb CDS ROG0230 2614712 2615407 - NA 1295 murQ CDS COG2103 2615634 2616521 - [R] Predicted sugar phosphate isomerase 1296 cds-WP_002211566.1 CDS COG1737 2616729 2617568 + [K] Transcriptional regulators 1297 cds-WP_002211567.1 CDS COG1145 2617730 2617990 + [C] Ferredoxin 1298 tnpA_42 CDS COG1943 2618146 2618604 - [L] Transposase and inactivated derivatives 1299 acpS CDS COG0736 2618806 2619186 - [I] Phosphopantetheinyl transferase (holo-ACP synthase) pdxJ CDS COG0854 2619186 2619917 - [H] Pyridoxal phosphate biosynthesis protein 1300 istB_26 CDS COG1484 2620107 2620824 - [L] DNA replication protein cds-WP_235437961.1 CDS NA 2620742 2620933 - NA istA_26 CDS COG4584 2620887 2621908 - [L] Transposase and inactivated derivatives 1301 cds-WP_002209764.1 CDS COG0583 2622002 2622895 + [K] Transcriptional regulator 1302 cds-WP_002209763.1 CDS COG0667 2622950 2623939 - [C] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) cds-WP_002209762.1 CDS COG0656 2623965 2624816 - [R] Aldo/keto reductases, related to diketogulonate reductase 1303 cds-WP_002215246.1 CDS NA 2625007 2625132 + NA 1304 cds-WP_002209759.1 CDS ROG1509 2625289 2626917 + NA 1305 cds-WP_002209758.1 CDS COG1472 2626996 2629377 - [G] Beta-glucosidase-related glycosidases 1306 cds-WP_002209757.1 CDS COG4929 2629536 2630066 - [S] Uncharacterized membrane-anchored protein cds-WP_002209756.1 CDS COG4984 2630059 2632266 - [S] Predicted membrane protein 1307 cds-WP_002209743.1-5 CDS COG3328 2632718 2633926 + [L] Transposase and inactivated derivatives cds-A1122_RS12180 CDS COG2850 2633963 2634313 + [S] Uncharacterized conserved protein 1308 cds-WP_002209753.1 CDS ROG0770 2634328 2634909 - NA 1309 cds-WP_002224869.1 CDS NA 2635198 2635320 - NA 1310 yapC CDS COG3468 2635444 2637360 - [MU] Type V secretory pathway, adhesin AidA 1311 cds-WP_002209751.1 CDS NA 2638169 2638408 + NA cds-WP_002227852.1 CDS NA 2638447 2638698 + NA cds-WP_002209749.1 CDS COG3157 2638722 2639294 + [S] Hemolysin-coregulated protein (uncharacterized) 1312 cds-WP_002209748.1 CDS ROG1205 2639306 2639707 - NA 1313 cds-WP_002209746.1 CDS NA 2639940 2640341 - NA cds-A1122_RS12225 CDS NA 2640334 2641190 - NA 1314 cds-WP_002209745.1 CDS COG3423 2641863 2642108 + [K] Predicted transcriptional regulator 1315 pbpC CDS NA 2642321 2643857 - NA cds-WP_002209743.1-6 CDS COG3328 2643887 2645095 - [L] Transposase and inactivated derivatives 1316 cds-WP_002222248.1 CDS COG3037 2645235 2646491 + [S] Uncharacterized protein conserved in bacteria 1317 yfcD CDS COG4119 2646608 2647156 - [LR] Predicted NTP pyrophosphohydrolase 1318 yfcE CDS NA 2647378 2647966 - NA 1319 cds-WP_002209740.1 CDS COG2200 2648154 2648846 - [T] FOG: EAL domain 1320 cds-WP_002209739.1 CDS COG1090 2649200 2650108 + [R] Predicted nucleoside-diphosphate sugar epimerase 1321 hisP CDS COG4598 2650232 2651029 - [E] ABC-type histidine transport system, ATPase component cds-WP_002209737.1 CDS COG4160 2651043 2651759 - [E] ABC-type arginine/histidine transport system, permease component cds-WP_002209736.1 CDS COG4215 2651756 2652442 - [E] ABC-type arginine transport system, permease component hisJ CDS COG0834 2652545 2653327 - [ET] ABC-type amino acid transport/signal transduction systems, 1322 cds-WP_002209734.1 CDS COG0163 2653852 2654424 - [H] 3-polyprenyl-4-hydroxybenzoate decarboxylase purF CDS COG0034 2654671 2656188 - [F] Glutamine phosphoribosylpyrophosphate amidotransferase cvpA CDS COG1286 2656201 2656710 - [R] Uncharacterized membrane protein, required for colicin 1323 dedD CDS COG3147 2657022 2657744 - [S] Uncharacterized protein conserved in bacteria folC CDS COG0285 2657864 2659168 - [H] Folylpolyglutamate synthase accD CDS COG0777 2659417 2660331 - [I] Acetyl-CoA carboxylase beta subunit 1324 cds-WP_002209728.1 CDS COG0586 2660562 2661224 - [S] Uncharacterized membrane-associated protein truA CDS COG0101 2661381 2662262 - [J] Pseudouridylate synthase cds-WP_002209726.1 CDS COG0136 2662262 2663272 - [E] Aspartate-semialdehyde dehydrogenase 1325 tnpA_43 CDS COG1943 2663551 2664009 + [L] Transposase and inactivated derivatives 1326 pdxB CDS COG0111 2664153 2665280 - [HE] Phosphoglycerate dehydrogenase and related dehydrogenases cds-WP_002209724.1 CDS COG2207 2665327 2666112 - [K] AraC-type DNA-binding domain-containing proteins 1327 cds-WP_002209722.1 CDS COG0697 2666338 2667255 + [GER] Permeases of the drug/metabolite transporter (DMT) 1328 flk CDS NA 2667540 2668577 + NA 1329 cds-WP_002209720.1 CDS COG3539 2668919 2669449 - [NU] P pilus assembly protein, pilin FimA 1330 cds-WP_002209718.1 CDS COG1794 2670240 2670932 + [M] Aspartate racemase 1331 cds-A1122_RS24335 CDS NA 2671204 2671281 + NA 1332 fabB CDS COG0304 2671340 2672569 - [IQ] 3-oxoacyl-(acyl-carrier-protein) synthase 1333 mnmC CDS COG4121 2672741 2674810 + [S] Uncharacterized conserved protein 1334 cds-WP_002209715.1 CDS ROG4992 2674988 2675266 - NA cds-WP_002209714.1 CDS COG3101 2675324 2675866 - [S] Uncharacterized protein conserved in bacteria 1335 cds-WP_002209713.1 CDS COG0730 2675966 2676772 - [R] Predicted permeases mepA CDS COG3770 2676776 2677603 - [M] Murein endopeptidase aroC CDS COG0082 2677609 2678694 - [E] Chorismate synthase prmB CDS COG2890 2678771 2679703 - [J] Methylase of polypeptide chain release factors 1336 smrB CDS COG2840 2680073 2680603 + [S] Uncharacterized protein conserved in bacteria 1337 sixA CDS COG2062 2680949 2681440 - [T] Phosphohistidine phosphatase SixA 1338 fadJ CDS COG1250 2682009 2684333 - [I] 3-hydroxyacyl-CoA dehydrogenase fadI CDS COG0183 2684333 2685643 - [I] Acetyl-CoA acetyltransferase 1339 cds-WP_002227845.1 CDS COG3691 2685930 2686226 - [S] Uncharacterized protein conserved in bacteria 1340 fadL CDS COG2067 2686640 2687905 + [I] Long-chain fatty acid transport protein 1341 mlaA CDS COG2853 2688012 2688776 - [M] Surface lipoprotein ccmI CDS COG4235 2688812 2690038 - [O] Cytochrome c biogenesis factor cds-WP_002214855.1 CDS COG3088 2690038 2690550 - [O] Uncharacterized protein involved in biosynthesis of cds-WP_002209699.1 CDS COG0526 2690547 2691113 - [OC] Thiol-disulfide isomerase and thioredoxins cds-WP_002209698.1 CDS COG1138 2691110 2693080 - [O] Cytochrome c biogenesis factor ccmE CDS COG2332 2693077 2693571 - [O] Cytochrome c-type biogenesis protein CcmE ccmD CDS COG3114 2693568 2693870 - [U] Heme exporter protein D cds-WP_002209695.1 CDS COG0755 2693867 2694604 - [O] ABC-type transport system involved in cytochrome ccmB CDS COG2386 2694667 2695326 - [O] ABC-type transport system involved in cytochrome ccmA CDS COG4133 2695296 2695952 - [O] ABC-type transport system involved in cytochrome 1342 cds-WP_002209692.1 CDS NA 2696397 2696864 - NA 1343 rna-A1122_RS12500 tRNA NA 2697119 2697193 - NA 1344 cds-WP_002209691.1 CDS COG1704 2697480 2698022 + [S] Uncharacterized conserved protein cds-WP_002209690.1 CDS ROG1462 2698027 2700066 + NA 1345 cds-WP_002209688.1 CDS COG2824 2700442 2700783 + [P] Uncharacterized Zn-ribbon-containing protein involved in phosphonate 1346 cds-WP_002209687.1 CDS ROG4727 2700840 2701187 - NA cds-WP_002209686.1 CDS COG3518 2701212 2701691 - [S] Uncharacterized protein conserved in bacteria cds-WP_002209685.1 CDS COG4455 2701788 2702594 - [R] Protein of avirulence locus involved in cds-WP_002354537.1 CDS NA 2702614 2703456 - NA cds-WP_002209684.1 CDS COG4104 2703462 2703722 - [S] Uncharacterized conserved protein cds-WP_002209683.1 CDS COG3501 2703821 2706571 - [S] Uncharacterized protein conserved in bacteria tssM_3 CDS COG3523 2706898 2710725 - [S] Uncharacterized protein conserved in bacteria tssL_2 CDS COG1360 2710734 2711519 - [N] Flagellar motor protein 1347 istB_27 CDS COG1484 2711586 2712368 - [L] DNA replication protein istA_27 CDS COG4584 2712365 2713387 - [L] Transposase and inactivated derivatives 1348 recO CDS COG1381 2713514 2714239 - [L] Recombinational DNA repair protein (RecF pathway) era CDS COG1159 2714249 2715160 - [R] GTPase rnc CDS COG0571 2715157 2715837 - [K] dsRNA-specific ribonuclease 1349 lepB CDS COG0681 2716189 2717187 - [U] Signal peptidase I lepA CDS COG0481 2717197 2718996 - [M] Membrane GTPase LepA 1350 cds-WP_002209676.1 CDS NA 2719496 2720350 + NA 1351 rseC CDS COG3086 2720371 2720826 - [T] Positive regulator of sigma E activity rseB CDS COG3026 2720823 2721779 - [T] Negative regulator of sigma E activity rseA CDS COG3073 2721779 2722435 - [T] Negative regulator of sigma E activity rpoE CDS COG1595 2722461 2723036 - [K] DNA-directed RNA polymerase specialized sigma subunit, 1352 nadB CDS COG0029 2723260 2724861 + [H] Aspartate oxidase 1353 cds-A1122_RS24340 CDS NA 2725002 2725070 + NA 1354 cds-WP_002209670.1 CDS COG4123 2725144 2725890 - [R] Predicted O-methyltransferase 1355 srmB CDS COG0513 2726142 2727467 + [LKJ] Superfamily II DNA and RNA helicases 1356 cds-WP_002209667.1 CDS COG0666 2727598 2728254 - [R] FOG: Ankyrin repeat 1357 cds-WP_002209665.1 CDS NA 2728332 2729294 - NA 1358 grcA CDS COG3445 2729473 2729856 - [R] Acid-induced glycyl radical enzyme 1359 ung CDS COG0692 2730209 2730895 + [L] Uracil DNA glycosylase 1360 pcp CDS COG2039 2730986 2731633 - [O] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) cds-WP_002209661.1 CDS COG3817 2731643 2732662 - [S] Predicted membrane protein cds-WP_002209660.1 CDS COG3819 2732659 2733390 - [S] Predicted membrane protein pxpA CDS COG1540 2733475 2734212 - [R] Uncharacterized proteins, homologs of lactam utilization pxpC CDS COG1984 2734209 2735159 - [E] Allophanate hydrolase subunit 2 pxpB CDS COG2049 2735153 2735809 - [E] Allophanate hydrolase subunit 1 1361 cds-WP_002225777.1 CDS NA 2736188 2736343 + NA 1362 cds-WP_002354507.1 CDS COG0327 2736428 2737171 - [S] Uncharacterized conserved protein 1363 cds-WP_002209656.1 CDS COG5212 2737297 2738334 - [T] Low-affinity cAMP phosphodiesterase phrB CDS COG0415 2738325 2739788 - [L] Deoxyribodipyrimidine photolyase cds-WP_002209654.1 CDS COG3272 2739918 2740400 - [S] Uncharacterized conserved protein 1364 cds-WP_002209653.1 CDS NA 2740739 2740945 - NA 1365 cds-WP_002216017.1 CDS NA 2741111 2741353 + NA cds-WP_002216016.1 CDS NA 2741350 2741439 + NA kdpA CDS COG2060 2741440 2743128 + [P] K+-transporting ATPase, A chain kdpB CDS COG2216 2743222 2745288 + [P] High-affinity K+ transport system, ATPase chain kdpC CDS COG2156 2745500 2746102 + [P] K+-transporting ATPase, c chain kdpD CDS COG2205 2746112 2748838 + [T] Osmosensitive K+ channel histidine kinase kdpE CDS COG0745 2749077 2749760 + [TK] Response regulators consisting of a CheY-like 1366 cds-WP_002209647.1 CDS COG2510 2749855 2750283 + [S] Predicted membrane protein 1367 cds-WP_002209646.1 CDS NA 2750411 2750653 - NA 1368 pgm CDS COG0033 2751027 2752670 - [G] Phosphoglucomutase seqA CDS COG3057 2752743 2753270 - [L] Negative regulator of replication initiationR 1369 cds-WP_002212246.1 CDS COG4461 2753765 2754133 + [S] Uncharacterized protein conserved in bacteria, putative 1370 chbG CDS COG3394 2754428 2755189 - [S] Uncharacterized protein conserved in bacteria chbR CDS COG2207 2755241 2756071 - [K] AraC-type DNA-binding domain-containing proteins 1371 chbA CDS COG1447 2756120 2756467 - [G] Phosphotransferase system cellobiose-specific component IIA chbC CDS COG1455 2756634 2757995 - [G] Phosphotransferase system cellobiose-specific component IIC cds-WP_002212240.1 CDS COG1440 2758006 2758323 - [G] Phosphotransferase system cellobiose-specific component IIB 1372 cds-WP_002212239.1 CDS NA 2759096 2759275 + NA 1373 crcB CDS COG0239 2759364 2759744 + [D] Integral membrane protein possibly involved in crcB_2 CDS COG0239 2759760 2760164 + [D] Integral membrane protein possibly involved in 1374 kch CDS COG1226 2760262 2761437 - [P] Kef-type K+ transport systems, predicted NAD-binding 1375 hdeB CDS NA 2762055 2762384 + NA 1376 cds-WP_002212234.1 CDS COG3376 2762553 2763611 - [P] High-affinity nickel permease 1377 yut CDS COG4413 2763760 2764752 - [E] Urea transporter cds-WP_002232296.1 CDS COG0829 2764944 2765123 - [O] Urease accessory protein UreH cds-WP_002228375.1 CDS COG0829 2765077 2765910 - [O] Urease accessory protein UreH ureG CDS COG0378 2765907 2766569 - [OK] Ni2+-binding GTPase involved in regulation of cds-WP_002212231.1 CDS COG0830 2766696 2767382 - [O] Urease accessory protein UreF ureE CDS COG2371 2767404 2768099 - [O] Urease accessory protein UreE cds-WP_002212229.1 CDS COG0804 2768395 2770113 - [E] Urea amidohydrolase (urease) alpha subunit ureB CDS COG0832 2770203 2770637 - [E] Urea amidohydrolase (urease) beta subunit cds-WP_002215288.1 CDS COG0831 2770690 2770992 - [E] Urea amidohydrolase (urease) gamma subunit 1378 cds-WP_002212226.1 CDS COG1124 2772191 2772856 - [EP] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component cds-WP_002212225.1 CDS COG1127 2772849 2773655 - [Q] ABC-type transport system involved in resistance cds-WP_002212224.1 CDS COG1173 2773655 2774461 - [EP] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components cds-WP_002212223.1 CDS COG0601 2774458 2775426 - [EP] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components cds-WP_002215276.1 CDS COG0747 2775426 2777003 - [E] ABC-type dipeptide transport system, periplasmic component 1379 cspA_2 CDS COG1278 2777908 2778120 - [K] Cold shock proteins 1380 cds-A1122_RS12915 CDS ROG1489 2778628 2778843 + NA 1381 cds-WP_002209743.1-7 CDS COG3328 2778880 2780088 - [L] Transposase and inactivated derivatives 1382 cds-WP_002212217.1 CDS NA 2780454 2780903 + NA 1383 cds-WP_002212216.1 CDS COG2521 2781001 2781336 - [R] Predicted archaeal methyltransferase 1384 asr CDS COG3637 2781814 2782179 - [M] Opacity protein and related surface antigens 1385 cds-WP_002212214.1 CDS COG0695 2782700 2782936 + [O] Glutaredoxin and related proteins nrdI CDS COG1780 2782950 2783354 + [F] Protein involved in ribonucleotide reduction nrdE CDS COG0209 2783336 2785486 + [F] Ribonucleotide reductase, alpha subunit nrdF CDS COG0208 2785593 2786564 + [F] Ribonucleotide reductase, beta subunit 1386 proV CDS COG4175 2787240 2788439 + [E] ABC-type proline/glycine betaine transport system, ATPase proW CDS COG4176 2788432 2789598 + [E] ABC-type proline/glycine betaine transport system, permease proX CDS COG2113 2789646 2790650 + [E] ABC-type proline/glycine betaine transport systems, periplasmic 1387 cds-WP_002228371.1 CDS NA 2790880 2791614 - NA 1388 istA_28 CDS COG4584 2791704 2792726 + [L] Transposase and inactivated derivatives istB_28 CDS COG1484 2792723 2793505 + [L] DNA replication protein cds-A1122_RS12990 CDS COG0582 2793572 2793982 + [L] Integrase 1389 cds-A1122_RS12995 CDS ROG6591 2794052 2794312 + NA 1390 cds-WP_002215393.1 CDS COG0582 2794398 2794583 + [L] Integrase 1391 cds-WP_002212204.1 CDS NA 2794746 2794997 - NA 1392 ybfF CDS COG0596 2795708 2796475 + [R] Predicted hydrolases or acyltransferases (alpha/beta hydrolase 1393 ybfE CDS ROG2075 2796807 2797094 + NA 1394 cds-WP_002359715.1 CDS NA 2797217 2797438 + NA 1395 fldA CDS COG0716 2797511 2798038 + [C] Flavodoxins 1396 fur CDS COG0735 2798405 2798851 + [P] Fe2+/Zn2+ uptake regulation proteins 1397 cds-A1122_RS13035 CDS COG3525 2799292 2801956 - [G] N-acetyl-beta-hexosaminidase 1398 cds-WP_002210355.1 CDS ROG8456 2802284 2803705 - NA 1399 glnS CDS COG0008 2804411 2806078 - [J] Glutamyl- and glutaminyl-tRNA synthetases 1400 tnpA_44 CDS COG1943 2806280 2806738 - [L] Transposase and inactivated derivatives 1401 nagE CDS COG1263 2807003 2809036 - [G] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 1402 nagB CDS COG0363 2809436 2810236 + [G] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase nagA_2 CDS COG1820 2810256 2811401 + [G] N-acetylglucosamine-6-phosphate deacetylase cds-WP_002227874.1 CDS COG1940 2811418 2812644 + [KG] Transcriptional regulator/sugar kinase cds-WP_002210349.1 CDS COG0647 2812717 2813469 + [G] Predicted sugar phosphatases of the HAD 1403 asnB CDS COG0367 2813824 2815488 + [E] Asparagine synthase (glutamine-hydrolyzing) 1404 rna-A1122_RS13090 tRNA NA 2815946 2816022 + NA rna-A1122_RS13095 tRNA NA 2816030 2816114 + NA rna-A1122_RS13100 tRNA NA 2816144 2816218 + NA rna-A1122_RS13105 tRNA NA 2816251 2816327 + NA rna-A1122_RS13110 tRNA NA 2816333 2816407 + NA 1405 ubiF CDS COG0654 2816801 2817982 - [HC] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 1406 miaB CDS COG0621 2818224 2819648 + [J] 2-methylthioadenine synthetase 1407 cds-WP_002210345.1 CDS COG1702 2819975 2821048 + [T] Phosphate starvation-inducible protein PhoH, predicted ATPase ybeY CDS COG0319 2821045 2821518 + [R] Predicted metal-dependent hydrolase corC CDS COG4535 2821636 2822514 + [P] Putative Mg2+ and Co2+ transporter CorC lnt CDS COG0815 2822522 2824069 + [M] Apolipoprotein N-acyltransferase 1408 cds-WP_002210339.1 CDS COG0834 2824834 2825751 + [ET] ABC-type amino acid transport/signal transduction systems, cds-WP_002210338.1 CDS COG0765 2825925 2826665 + [E] ABC-type amino acid transport system, permease gltK CDS COG0765 2826665 2827339 + [E] ABC-type amino acid transport system, permease cds-WP_002210336.1 CDS COG1126 2827339 2828064 + [E] ABC-type polar amino acid transport system, 1409 cds-WP_002210335.1 CDS ROG1153 2828198 2828680 - NA 1410 leuS CDS COG0495 2828941 2831523 + [J] Leucyl-tRNA synthetase lptE CDS COG2980 2831538 2832161 + [M] Rare lipoprotein B holA CDS COG1466 2832158 2833192 + [L] DNA polymerase III, delta subunit nadD CDS COG1057 2833182 2833844 + [H] Nicotinic acid mononucleotide adenylyltransferase rsfS CDS COG0799 2834068 2834385 + [S] Uncharacterized homolog of plant Iojap protein rlmH CDS COG1576 2834389 2834859 + [S] Uncharacterized conserved protein mrdA CDS COG0768 2834941 2836836 + [M] Cell division protein FtsI/penicillin-binding protein 2 mrdB CDS COG0772 2837021 2838133 + [D] Bacterial cell division membrane protein rlpA CDS COG0797 2838143 2839225 + [M] Lipoproteins 1411 dacA CDS COG1686 2839628 2840830 + [M] D-alanyl-D-alanine carboxypeptidase 1412 ybeD CDS COG2921 2841028 2841291 + [S] Uncharacterized conserved protein lipB CDS COG0321 2841503 2842204 + [H] Lipoate-protein ligase B lipA CDS COG0320 2842397 2843362 + [H] Lipoate synthase 1413 tatA CDS COG1826 2843543 2843800 - [U] Sec-independent protein secretion pathway components 1414 crcB_3 CDS COG0239 2844367 2844750 + [D] Integral membrane protein possibly involved in 1415 cspE CDS COG1278 2845173 2845382 - [K] Cold shock proteins 1416 cds-WP_050547899.1 CDS COG1278 2845708 2846139 + [K] Cold shock proteins 1417 cds-WP_002210313.1 CDS COG2771 2846459 2847049 - [K] DNA-binding HTH domain-containing proteins 1418 cds-WP_002210312.1 CDS COG3274 2847499 2848464 + [S] Uncharacterized protein conserved in bacteria 1419 cds-WP_002210311.1 CDS NA 2848646 2848828 + NA 1420 cds-WP_002210310.1 CDS ROG1365 2848846 2849040 - NA 1421 cds-WP_002210309.1 CDS COG1359 2849483 2849770 + [S] Uncharacterized conserved protein 1422 cds-WP_002214723.1 CDS COG5265 2849786 2851576 - [O] ABC-type transport system involved in Fe-S 1423 cds-WP_002210307.1 CDS COG2429 2851641 2851943 + [S] Uncharacterized conserved protein 1424 iolB CDS COG3718 2852146 2852961 - [G] Uncharacterized enzyme involved in inositol metabolism iolE CDS COG1082 2852971 2854029 - [G] Sugar phosphate isomerases/epimerases iolC CDS COG3892 2854044 2856014 - [S] Uncharacterized protein conserved in bacteria cds-WP_002210303.1 CDS COG0673 2856046 2857179 - [R] Predicted dehydrogenases and related proteins cds-WP_002210302.1 CDS COG1172 2857203 2858231 - [G] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components cds-WP_002210301.1 CDS COG1129 2858243 2859790 - [G] ABC-type sugar transport system, ATPase component cds-WP_002210300.1 CDS COG1879 2859839 2860768 - [G] ABC-type sugar transport system, periplasmic component iolG CDS COG0673 2860894 2861879 - [R] Predicted dehydrogenases and related proteins 1425 iolD CDS COG3962 2862173 2864098 - [E] Acetolactate synthase cds-WP_002210297.1 CDS COG1012 2864133 2865659 - [C] NAD-dependent aldehyde dehydrogenases 1426 cds-WP_002210296.1 CDS COG1737 2865965 2866819 + [K] Transcriptional regulators 1427 cds-WP_002214718.1 CDS COG3477 2867514 2868062 + [S] Predicted periplasmic/secreted protein 1428 cds-WP_002210294.1 CDS COG2373 2868469 2874447 + [R] Large extracellular alpha-helical protein cds-WP_002214717.1 CDS COG4953 2874504 2875382 + [M] Membrane carboxypeptidase/penicillin-binding protein PbpC cds-WP_002209743.1-8 CDS COG3328 2875416 2876624 + [L] Transposase and inactivated derivatives 1429 cds-WP_002210293.1 CDS COG3414 2876646 2876900 - [G] Phosphotransferase system, galactitol-specific IIB component cds-WP_002210291.1 CDS COG1762 2877069 2877512 - [GT] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 1430 cds-WP_002216059.1 CDS COG1609 2877879 2878913 + [K] Transcriptional regulators 1431 cds-A1122_RS24355 CDS NA 2879095 2879163 + NA 1432 pta CDS COG0280 2879179 2881317 - [C] Phosphotransacetylase ackA CDS COG0282 2881500 2882702 - [C] Acetate kinase 1433 yfbV CDS COG3092 2883124 2883579 + [S] Uncharacterized protein conserved in bacteria 1434 cds-WP_002210286.1 CDS COG3013 2883887 2884381 + [S] Uncharacterized conserved protein 1435 cds-WP_002210285.1 CDS COG0637 2884546 2885202 + [R] Predicted phosphatase/phosphohexomutase 1436 cds-WP_002227880.1 CDS COG0471 2885494 2887326 + [P] Di- and tricarboxylate transporters 1437 cds-WP_002216053.1 CDS NA 2887431 2887622 + NA 1438 yfbR CDS COG1896 2887669 2888262 - [R] Predicted hydrolases of HD superfamily 1439 cds-WP_002210282.1 CDS COG0436 2888413 2889627 - [E] Aspartate/tyrosine/aromatic aminotransferase 1440 rovM CDS COG0583 2890483 2891415 + [K] Transcriptional regulator 1441 cds-WP_002210279.1 CDS COG0838 2892093 2892593 + [C] NADH:ubiquinone oxidoreductase subunit 3 (chain A) cds-WP_002210278.1 CDS COG0377 2892695 2893372 + [C] NADH:ubiquinone oxidoreductase 20 kD subunit and nuoC CDS COG0649 2893513 2895309 + [C] NADH:ubiquinone oxidoreductase 49 kD subunit 7 nuoE CDS COG1905 2895396 2895875 + [C] NADH:ubiquinone oxidoreductase 24 kD subunit nuoF CDS COG1894 2895872 2897257 + [C] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit nuoG CDS COG1034 2897344 2900088 + [C] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit nuoH CDS COG1005 2900085 2901062 + [C] NADH:ubiquinone oxidoreductase subunit 1 (chain H) nuoI CDS COG1143 2901077 2901619 + [C] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 nuoJ CDS COG0839 2901632 2902177 + [C] NADH:ubiquinone oxidoreductase subunit 6 (chain J) nuoK CDS COG0713 2902174 2902476 + [C] NADH:ubiquinone oxidoreductase subunit 11 or 4L nuoL CDS COG1009 2902473 2904317 + [CP] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit nuoM CDS COG1008 2904357 2905889 + [C] NADH:ubiquinone oxidoreductase subunit 4 (chain M) nuoN CDS COG1007 2905896 2907359 + [C] NADH:ubiquinone oxidoreductase subunit 2 (chain N) 1442 cds-WP_002210267.1 CDS NA 2907595 2908785 + NA 1443 cds-WP_002210266.1 CDS COG2731 2909123 2909590 - [G] Beta-galactosidase, beta subunit 1444 cds-WP_002210265.1 CDS COG3265 2909668 2910204 - [G] Gluconate kinase idnO CDS COG1028 2910253 2911017 - [IQR] Dehydrogenases with different specificities (related to 1445 cds-WP_002210262.1 CDS COG1649 2911776 2913059 - [S] Uncharacterized protein conserved in bacteria 1446 cds-WP_002210260.1 CDS COG1609 2913528 2914520 + [K] Transcriptional regulators 1447 cds-WP_002210257.1 CDS COG1052 2914986 2915936 + [CHR] Lactate dehydrogenase and related dehydrogenases 1448 cds-WP_002215889.1 CDS COG4965 2916482 2917798 + [U] Flp pilus assembly protein TadB cds-WP_002210255.1 CDS COG4702 2917828 2918343 + [S] Uncharacterized conserved protein edd CDS COG0129 2918353 2920224 + [EG] Dihydroxyacid dehydratase/phosphogluconate dehydratase 1449 cds-WP_002210251.1 CDS COG4575 2921150 2921458 + [S] Uncharacterized conserved protein 1450 cds-WP_002210249.1 CDS NA 2922013 2922657 + NA 1451 menF CDS COG1169 2923185 2924552 + [HQ] Isochorismate synthase menD CDS COG1165 2924780 2926483 + [H] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase menH CDS COG0596 2926480 2927298 + [R] Predicted hydrolases or acyltransferases (alpha/beta hydrolase menB CDS COG0447 2927312 2928169 + [H] Dihydroxynaphthoic acid synthase menC CDS COG1441 2928169 2929140 + [H] O-succinylbenzoate synthase menE CDS COG0318 2929128 2930543 + [IQ] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II ybiB CDS COG0547 2930609 2931568 + [E] Anthranilate phosphoribosyltransferase 1452 cds-A1122_RS24360 CDS NA 2931609 2931686 - NA 1453 cds-WP_002210240.1 CDS COG5618 2931950 2932210 - [R] Predicted periplasmic lipoprotein 1454 rlmF CDS COG3129 2932543 2933508 + [R] Predicted SAM-dependent methyltransferase cds-WP_002213804.1 CDS NA 2933555 2933821 + NA 1455 cds-WP_002264692.1 CDS NA 2933978 2934097 - NA 1456 istB_29 CDS COG1484 2934370 2935152 - [L] DNA replication protein istA_29 CDS COG4584 2935149 2936171 - [L] Transposase and inactivated derivatives 1457 cds-WP_002210238.1 CDS COG2202 2936230 2937528 + [T] FOG: PAS/PAC domain 1458 glnQ CDS COG1126 2937768 2938490 - [E] ABC-type polar amino acid transport system, glnP CDS COG0765 2938487 2939143 - [E] ABC-type amino acid transport system, permease glnH CDS COG0834 2939178 2939921 - [ET] ABC-type amino acid transport/signal transduction systems, 1459 cds-WP_002210234.1 CDS COG1434 2940491 2941618 - [S] Uncharacterized conserved protein 1460 dps CDS COG0783 2941938 2942441 - [P] DNA-binding ferritin-like protein (oxidative damage protectant) 1461 tam CDS COG4106 2942698 2943474 - [R] Trans-aconitate methyltransferase cds-WP_002210231.1 CDS COG0454 2943497 2943994 - [KR] Histone acetyltransferase HPA2 and related acetyltransferases rhtA CDS COG5006 2944010 2944897 - [R] Predicted permease, DMT superfamily 1462 ompX CDS COG3637 2945302 2945826 + [M] Opacity protein and related surface antigens 1463 cds-WP_002210228.1 CDS COG3965 2946142 2947080 + [P] Predicted Co/Zn/Cd cation transporters 1464 cds-WP_002210227.1 CDS COG1544 2947318 2947860 + [J] Ribosome-associated protein Y (PSrp-1) 1465 cds-WP_002210225.1 CDS NA 2948056 2948724 + NA 1466 cds-WP_002210224.1 CDS COG1063 2949466 2950533 + [ER] Threonine dehydrogenase and related Zn-dependent dehydrogenases 1467 cds-WP_002210223.1 CDS COG1879 2950708 2951625 + [G] ABC-type sugar transport system, periplasmic component cds-WP_002210222.1 CDS COG1129 2951665 2953155 + [G] ABC-type sugar transport system, ATPase component cds-WP_002210221.1 CDS COG1172 2953152 2954144 + [G] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1468 cds-WP_002210220.1 CDS COG1609 2954277 2955281 - [K] Transcriptional regulators 1469 cds-WP_173363253.1 CDS COG0583 2955528 2956490 - [K] Transcriptional regulator 1470 cds-WP_002210218.1 CDS COG0473 2956572 2957657 + [CE] Isocitrate/isopropylmalate dehydrogenase 1471 cds-A1122_RS23995 CDS NA 2957791 2957859 + NA 1472 cds-WP_002210215.1 CDS COG1292 2958274 2959920 + [M] Choline-glycine betaine transporter cds-WP_002213815.1 CDS COG4638 2960037 2961161 + [PR] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, cds-WP_002213817.1 CDS COG1018 2961257 2962222 + [C] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 1473 cds-WP_025476565.1 CDS COG2831 2962919 2964562 + [U] Hemolysin activation/secretion protein cdiA_2 CDS COG3210 2964718 2972313 + [U] Large exoproteins involved in heme utilization cds-WP_002210211.1 CDS COG4304 2972315 2972824 + [S] Uncharacterized protein conserved in bacteria 1474 cds-WP_002213821.1 CDS NA 2973069 2973320 + NA 1475 cds-WP_016256369.1 CDS ROG5576 2973461 2973808 + NA 1476 cds-A1122_RS13790 CDS COG3210 2973933 2976017 + [U] Large exoproteins involved in heme utilization cds-WP_002210208.1 CDS NA 2976027 2976224 + NA 1477 cds-WP_002213827.1 CDS NA 2976427 2976594 + NA 1478 cds-WP_002213829.1 CDS NA 2976736 2977140 + NA 1479 cds-WP_002213832.1 CDS COG3210 2977300 2977692 + [U] Large exoproteins involved in heme utilization 1480 cds-WP_002403870.1 CDS NA 2978043 2978492 + NA 1481 ugpC_2 CDS COG3839 2978757 2979836 - [G] ABC-type sugar transport systems, ATPase components 1482 cds-WP_002210201.1 CDS COG1109 2979936 2981324 - [G] Phosphomannomutase cds-WP_002210200.1 CDS COG1609 2981341 2982381 - [K] Transcriptional regulators 1483 cds-WP_002210199.1 CDS COG1653 2982653 2983939 + [G] ABC-type sugar transport system, periplasmic component cds-WP_002210198.1 CDS COG1175 2984048 2984923 + [G] ABC-type sugar transport systems, permease components cds-WP_002210197.1 CDS COG0395 2984924 2985748 + [G] ABC-type sugar transport system, permease component cds-WP_002210196.1 CDS COG2152 2985895 2986950 + [G] Predicted glycosylase cds-WP_002213840.1 CDS NA 2986977 2987915 + NA 1484 cds-WP_002210194.1 CDS ROG0103 2988038 2989153 + NA cds-WP_002210193.1 CDS NA 2989192 2990466 + NA 1485 cds-WP_002210192.1 CDS COG0668 2991049 2992293 - [M] Small-conductance mechanosensitive channel 1486 cas1f CDS COG1518 2993499 2994479 + [L] Uncharacterized protein predicted to be involved cas3f CDS COG1203 2994476 2997763 + [R] Predicted helicases 1487 csy1 CDS ROG1732 2998171 2999517 + NA csy2 CDS ROG1613 2999514 3000464 + NA csy3 CDS ROG1300 3000482 3001486 + NA cas6f CDS ROG1570 3001497 3002051 + NA 1488 cds-WP_002211865.1 CDS COG0667 3002129 3003148 - [C] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) fae CDS COG1795 3003159 3003662 - [S] Uncharacterized conserved protein cds-WP_002211863.1 CDS ROG2472 3003709 3005067 - NA 1489 cds-WP_002211861.1 CDS COG0583 3005515 3006441 + [K] Transcriptional regulator 1490 cds-WP_002211859.1 CDS COG2771 3006928 3007665 + [K] DNA-binding HTH domain-containing proteins 1491 cds-WP_002211858.1 CDS COG3916 3007658 3008302 - [TQ] N-acyl-L-homoserine lactone synthetase 1492 cds-WP_002211857.1 CDS COG0697 3008733 3009410 + [GER] Permeases of the drug/metabolite transporter (DMT) 1493 cds-WP_002211856.1 CDS NA 3009938 3010102 + NA 1494 cds-WP_002211854.1 CDS COG1054 3010461 3011528 + [R] Predicted sulfurtransferase 1495 cds-WP_002211853.1 CDS COG0628 3011677 3012735 + [R] Predicted permease 1496 cds-WP_002211852.1 CDS NA 3012850 3012963 - NA 1497 cds-WP_002211851.1 CDS COG2771 3013307 3013921 - [K] DNA-binding HTH domain-containing proteins 1498 solA CDS COG0665 3014188 3015303 - [E] Glycine/D-amino acid oxidases (deaminating) 1499 cds-WP_015683821.1 CDS COG3328 3015664 3016872 + [L] Transposase and inactivated derivatives 1500 hxpB CDS COG0637 3017123 3017788 - [R] Predicted phosphatase/phosphohexomutase 1501 cds-WP_002211847.1 CDS NA 3018199 3018753 + NA 1502 cds-WP_002211846.1 CDS COG3001 3018882 3019757 - [G] Fructosamine-3-kinase cds-WP_002216683.1 CDS NA 3019782 3019994 - NA 1503 yfeD CDS COG1108 3020062 3020955 - [P] ABC-type Mn2+/Zn2+ transport systems, permease components yfeC CDS COG1108 3020952 3021836 - [P] ABC-type Mn2+/Zn2+ transport systems, permease components yfeB CDS COG1121 3021836 3022726 - [P] ABC-type Mn/Zn transport systems, ATPase component yfeA CDS COG0803 3022723 3023691 - [P] ABC-type metal ion transport system, periplasmic 1504 cds-WP_002216686.1 CDS COG0741 3023903 3024565 + [M] Soluble lytic murein transglycosylase and related 1505 cds-WP_002211840.1 CDS COG2095 3024687 3025370 - [U] Multiple antibiotic transporter 1506 cds-WP_002211839.1 CDS NA 3025689 3025940 + NA 1507 cds-WP_002216696.1 CDS ROG3830 3026699 3026911 - NA 1508 thrS CDS COG0441 3027302 3029230 + [J] Threonyl-tRNA synthetase infC CDS COG0290 3029234 3029785 + [J] Translation initiation factor 3 (IF-3) rpmI CDS COG0291 3029882 3030079 + [J] Ribosomal protein L35 rplT CDS COG0292 3030117 3030473 + [J] Ribosomal protein L20 1509 pheS CDS COG0016 3030972 3031955 + [J] Phenylalanyl-tRNA synthetase alpha subunit pheT CDS COG0072 3031969 3034356 + [J] Phenylalanyl-tRNA synthetase beta subunit ihfA CDS COG0776 3034361 3034657 + [L] Bacterial nucleoid DNA-binding protein 1510 cds-WP_002211829.1 CDS NA 3034991 3035449 + NA 1511 btuC CDS COG4139 3035676 3036683 + [H] ABC-type cobalamin transport system, permease component cds-WP_002211827.1 CDS COG0386 3036753 3037307 + [O] Glutathione peroxidase btuD CDS COG4138 3037332 3038090 + [H] ABC-type cobalamin transport system, ATPase component 1512 arnB CDS COG0399 3038440 3039594 + [M] Predicted pyridoxal phosphate-dependent enzyme apparently involved arnC CDS COG0463 3039581 3040564 + [M] Glycosyltransferases involved in cell wall biogenesis arnA CDS COG0223 3040561 3042564 + [J] Methionyl-tRNA formyltransferase arnD CDS COG0726 3042561 3043466 + [G] Predicted xylanase/chitin deacetylase arnT CDS COG1807 3043463 3045127 + [M] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of arnE CDS COG0697 3045124 3045468 + [GER] Permeases of the drug/metabolite transporter (DMT) arnF CDS COG0697 3045465 3045851 + [GER] Permeases of the drug/metabolite transporter (DMT) 1513 cds-WP_002211818.1 CDS NA 3046008 3046190 - NA 1514 cds-WP_002216102.1 CDS COG0791 3046131 3046595 + [M] Cell wall-associated hydrolases (invasion-associated proteins) 1515 cds-WP_002211816.1 CDS COG0095 3046720 3047736 + [H] Lipoate-protein ligase A cds-A1122_RS23745 CDS COG0397 3047788 3049251 + [S] Uncharacterized conserved protein 1516 cds-WP_002211815.1 CDS COG0722 3049420 3050466 - [E] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 1517 cds-WP_002211814.1 CDS COG1806 3050623 3051444 - [S] Uncharacterized protein conserved in bacteria 1518 ppsA CDS COG0574 3051781 3054165 + [G] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase 1519 ydiK CDS NA 3054764 3055867 - NA 1520 cds-WP_002211811.1 CDS COG0277 3056488 3059544 + [C] FAD/FMN-containing dehydrogenases cds-WP_002211810.1 CDS COG2050 3059666 3060082 + [Q] Uncharacterized protein, possibly involved in aromatic 1521 sufA CDS COG0316 3060677 3061048 + [S] Uncharacterized conserved protein sufB CDS COG0719 3061063 3062574 + [O] ABC-type transport system involved in Fe-S sufC CDS COG0396 3062760 3063506 + [O] ABC-type transport system involved in Fe-S sufD CDS COG0719 3063481 3064806 + [O] ABC-type transport system involved in Fe-S sufS CDS COG0520 3064803 3066023 + [E] Selenocysteine lyase sufE CDS COG2166 3066112 3066534 + [R] SufE protein probably involved in Fe-S 1522 cds-WP_002211803.1 CDS COG1376 3066805 3067824 + [S] Uncharacterized protein conserved in bacteria 1523 istB_30 CDS COG1484 3067868 3068650 - [L] DNA replication protein istA_30 CDS COG4584 3068647 3069669 - [L] Transposase and inactivated derivatives 1524 tnpA_45 CDS COG1943 3070251 3070709 - [L] Transposase and inactivated derivatives 1525 cds-WP_002227902.1 CDS COG4238 3070900 3071136 - [M] Murein lipoprotein 1526 pykF CDS COG0469 3071457 3072869 - [G] Pyruvate kinase 1527 rna-A1122_RS14260 tRNA NA 3073445 3073521 - NA rna-A1122_RS14265 tRNA NA 3073581 3073657 - NA 1528 cds-WP_002210937.1 CDS COG0534 3073900 3075273 - [V] Na+-driven multidrug efflux pump cds-WP_002210938.1 CDS NA 3075286 3075477 - NA 1529 cds-WP_002210939.1 CDS COG0307 3075522 3076178 + [H] Riboflavin synthase alpha chain 1530 cfa CDS COG2230 3076229 3077380 - [M] Cyclopropane fatty acid synthase and related 1531 punC CDS COG0477 3077860 3079062 - [GEPR] Permeases of the major facilitator superfamily 1532 punR CDS COG0583 3079352 3080284 + [K] Transcriptional regulator 1533 purR CDS COG1609 3080373 3081398 - [K] Transcriptional regulators 1534 cds-WP_002216285.1 CDS NA 3081732 3081821 + NA 1535 sodB CDS COG0605 3081925 3082503 - [P] Superoxide dismutase 1536 cds-WP_002210945.1 CDS COG0791 3082881 3083732 - [M] Cell wall-associated hydrolases (invasion-associated proteins) 1537 cds-WP_002210946.1 CDS COG0278 3084172 3084522 + [O] Glutaredoxin-related protein 1538 cds-A1122_RS23755 CDS NA 3084721 3084789 + NA 1539 rnt CDS COG0847 3084831 3085478 - [L] DNA polymerase III, epsilon subunit and 1540 gloA CDS COG0346 3085590 3085997 - [E] Lactoylglutathione lyase and related lyases 1541 cds-WP_002210949.1 CDS COG3209 3086270 3089224 + [M] Rhs family protein 1542 cds-WP_002210950.1 CDS COG1902 3089445 3090542 - [C] NADH:flavin oxidoreductases, Old Yellow Enzyme family cds-WP_002210951.1 CDS COG1309 3090630 3091229 - [K] Transcriptional regulator 1543 eptA CDS COG2194 3091452 3093089 - [R] Predicted membrane-associated, metal-dependent hydrolase 1544 cds-WP_002210953.1 CDS COG3313 3093263 3093502 + [R] Predicted Fe-S protein cds-WP_002210954.1 CDS COG4989 3093634 3094530 + [R] Predicted oxidoreductase 1545 rovA CDS COG1846 3095328 3095759 + [K] Transcriptional regulators 1546 cds-WP_002210956.1 CDS COG3133 3095903 3096370 - [M] Outer membrane lipoprotein 1547 anmK CDS COG2377 3096926 3098038 + [O] Predicted molecular chaperone distantly related to 1548 cds-WP_002218323.1 CDS COG3895 3098096 3098410 + [R] Predicted periplasmic protein pdxH CDS COG0259 3098501 3099154 + [H] Pyridoxamine-phosphate oxidase tyrS CDS COG0162 3099336 3100610 + [J] Tyrosyl-tRNA synthetase pdxY CDS COG2240 3100765 3101625 + [H] Pyridoxal/pyridoxine/pyridoxamine kinase 1549 gstA CDS COG0625 3101685 3102290 - [O] Glutathione S-transferase 1550 istA_31 CDS COG4584 3102540 3103562 + [L] Transposase and inactivated derivatives istB_31 CDS COG1484 3103559 3104341 + [L] DNA replication protein 1551 cds-WP_002210964.1 CDS NA 3104494 3104757 - NA 1552 cds-WP_002210965.1 CDS ROG0339 3105003 3105593 - NA 1553 dtpA CDS COG3104 3105848 3107353 - [E] Dipeptide/tripeptide permease 1554 cds-WP_002210967.1 CDS COG4950 3107996 3109276 - [S] Uncharacterized protein conserved in bacteria 1555 sapF CDS COG4167 3109666 3110481 - [V] ABC-type antimicrobial peptide transport system, ATPase sapD CDS COG4170 3110481 3111473 - [V] ABC-type antimicrobial peptide transport system, ATPase sapC CDS COG4171 3111473 3112363 - [V] ABC-type antimicrobial peptide transport system, permease sapB CDS COG4168 3112350 3113315 - [V] ABC-type antimicrobial peptide transport system, permease sapA CDS COG0747 3113312 3114958 - [E] ABC-type dipeptide transport system, periplasmic component 1556 tnpA_46 CDS COG1943 3115616 3116074 + [L] Transposase and inactivated derivatives 1557 pspF CDS COG1221 3116239 3117267 - [KT] Transcriptional regulators containing an AAA-type ATPase 1558 pspA CDS COG1842 3117512 3118177 + [KT] Phage shock protein A (IM30), suppresses 1559 pspB CDS ROG0730 3118339 3118566 + NA pspC CDS COG1983 3118566 3118925 + [KT] Putative stress-responsive transcriptional regulator 1560 pspD CDS NA 3119010 3119252 + NA cds-WP_002210979.1 CDS COG3106 3119233 3120630 + [R] Predicted ATPase cds-WP_002210980.1 CDS COG3768 3120627 3121688 + [S] Predicted membrane protein 1561 cds-WP_002210981.1 CDS COG5654 3121698 3122156 - [S] Uncharacterized conserved protein cds-WP_002210982.1 CDS COG5642 3122218 3122664 - [S] Uncharacterized conserved protein 1562 tyrR CDS COG3283 3122999 3124576 + [KE] Transcriptional regulator of aromatic amino acids 1563 tnpA_47 CDS COG1943 3124723 3125181 - [L] Transposase and inactivated derivatives 1564 tpx CDS COG2077 3125434 3125937 - [O] Peroxiredoxin 1565 ycjG CDS COG4948 3126100 3127074 + [MR] L-alanine-DL-glutamate epimerase and related enzymes of 1566 mpaA CDS COG2866 3127116 3127823 - [E] Predicted carboxypeptidase 1567 cds-WP_002210987.1 CDS COG4166 3128264 3129880 + [E] ABC-type oligopeptide transport system, periplasmic component 1568 zntB CDS COG0598 3130123 3131106 + [P] Mg2+ and Co2+ transporters 1569 cds-WP_002210990.1 CDS COG0789 3131480 3132319 - [K] Predicted transcriptional regulators 1570 cds-WP_002222427.1 CDS COG0657 3132631 3133599 - [I] Esterase/lipase 1571 ttcA CDS COG0037 3133906 3134847 - [D] Predicted ATPase of the PP-loop superfamily 1572 nifJ CDS COG0674 3135122 3138655 - [C] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, 1573 cds-WP_002210994.1 CDS COG2076 3139134 3139466 + [P] Membrane transporters of cations and cationic 1574 cds-WP_002210995.1 CDS COG1285 3139526 3140185 - [S] Uncharacterized membrane protein 1575 cds-WP_002227907.1 CDS COG3042 3140470 3140811 + [R] Putative hemolysin 1576 hslJ CDS COG3187 3140869 3141321 - [O] Heat shock protein 1577 cds-WP_002210998.1 CDS COG1052 3141391 3142383 - [CHR] Lactate dehydrogenase and related dehydrogenases 1578 cds-WP_002210999.1 CDS ROG3879 3142649 3145345 + NA cds-WP_002211000.1 CDS ROG0130 3145342 3145536 + NA cds-WP_002211001.1 CDS COG3784 3145546 3145917 + [S] Uncharacterized protein conserved in bacteria 1579 dalD CDS COG0246 3146118 3147509 - [G] Mannitol-1-phosphate/altronate dehydrogenases 1580 cds-WP_002211003.1 CDS COG2390 3147719 3148675 + [K] Transcriptional regulator, contains sigma factor-related N-terminal 1581 azoR CDS COG1182 3148796 3149401 - [I] Acyl carrier protein phosphodiesterase 1582 hrpA CDS COG1643 3149824 3153711 + [L] HrpA-like helicases 1583 cds-WP_002214609.1 CDS COG4679 3154050 3154379 + [S] Phage-related protein cds-WP_002211007.1 CDS COG1396 3154376 3154699 + [K] Predicted transcriptional regulators 1584 cds-WP_002211008.1 CDS COG3591 3154755 3155591 - [E] V8-like Glu-specific endopeptidase 1585 asr_2 CDS ROG8184 3155925 3156209 - NA 1586 cds-WP_002211010.1 CDS COG3038 3156813 3157367 + [C] Cytochrome B561 cds-WP_002211011.1 CDS COG2353 3157393 3157971 + [S] Uncharacterized conserved protein 1587 cds-WP_002214618.1 CDS NA 3158536 3158694 + NA 1588 cds-WP_002227910.1 CDS NA 3158798 3159154 - NA cds-WP_002211013.1 CDS COG3209 3159157 3161781 - [M] Rhs family protein 1589 tnpA_48 CDS COG1943 3162751 3163209 + [L] Transposase and inactivated derivatives 1590 cds-WP_002211014.1 CDS COG2317 3163331 3164830 - [E] Zn-dependent carboxypeptidase 1591 rstB CDS COG2205 3164924 3166180 - [T] Osmosensitive K+ channel histidine kinase rstA CDS COG0745 3166229 3166975 - [TK] Response regulators consisting of a CheY-like 1592 cds-WP_002211016.1 CDS NA 3167272 3167688 + NA 1593 cds-WP_002211017.1 CDS COG0531 3167712 3169103 - [E] Amino acid transporters 1594 ydgH CDS ROG6959 3169373 3170326 - NA 1595 cds-WP_002227912.1 CDS NA 3170532 3170735 + NA 1596 pntA CDS COG3288 3170856 3172382 + [C] NAD/NADP transhydrogenase alpha subunit pntB CDS COG1282 3172455 3173849 + [C] NAD/NADP transhydrogenase beta subunit 1597 uspE CDS COG0589 3174124 3175080 - [T] Universal stress protein UspA and related cds-WP_002211022.1 CDS COG0664 3175215 3175967 - [T] cAMP-binding proteins - catabolite gene activator ogt CDS COG0350 3176040 3176558 - [L] Methylated DNA-protein cysteine methyltransferase 1598 phoA CDS COG1785 3176799 3178244 + [P] Alkaline phosphatase 1599 cds-WP_002227913.1 CDS ROG7900 3178790 3179800 + NA cds-WP_002227914.1 CDS ROG7900 3179800 3181185 + NA 1600 yjjG CDS COG1011 3181316 3181990 + [R] Predicted hydrolase (HAD superfamily) 1601 ilvN_2 CDS COG0440 3182057 3182359 - [E] Acetolactate synthase, small (regulatory) subunit ilvB CDS COG0028 3182361 3184028 - [EH] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate 1602 ivbL CDS NA 3184138 3184233 - NA 1603 cds-WP_002211028.1 CDS ROG4515 3184602 3185396 + NA 1604 cds-WP_002211029.1 CDS COG4458 3185565 3188105 - [S] Uncharacterized protein conserved in bacteria, putative cds-WP_002211030.1 CDS COG4457 3188102 3191173 - [S] Uncharacterized protein conserved in bacteria, putative cds-WP_002211031.1 CDS ROG5046 3191178 3192611 - NA 1605 cds-A1122_RS14800 CDS COG0775 3192817 3194241 + [F] Nucleoside phosphorylase 1606 cds-A1122_RS24390 CDS COG1116 3194238 3194738 - [P] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component cds-WP_002211034.1 CDS COG0600 3194748 3195569 - [P] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component cds-WP_002211035.1 CDS COG0715 3195573 3196604 - [P] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 1607 cds-WP_223871902.1 CDS COG1879 3196824 3197393 + [G] ABC-type sugar transport system, periplasmic component 1608 cds-WP_002211037.1 CDS NA 3197537 3198007 + NA 1609 cds-WP_002211038.1 CDS COG1609 3198071 3199087 + [K] Transcriptional regulators 1610 cds-WP_002211040.1 CDS NA 3199647 3199844 - NA 1611 cds-WP_001399975.1 CDS NA 3200041 3200289 - NA 1612 cds-WP_000722136.1 CDS COG1450 3200378 3201622 - [NU] Type II secretory pathway, component PulD cds-WP_002210570.1 CDS COG4128 3201622 3202647 - [R] Zonula occludens toxin cds-WP_000467041.1 CDS NA 3202651 3202938 - NA cds-WP_002222443.1 CDS ROG1373 3202951 3204513 - NA 1613 cds-WP_000473544.1 CDS NA 3204728 3204961 - NA cds-WP_000381239.1 CDS NA 3204997 3205248 - NA cds-WP_000073835.1 CDS NA 3205251 3205568 - NA cds-WP_000568107.1 CDS NA 3205580 3206632 - NA 1614 cds-WP_000527682.1 CDS COG2932 3206804 3207250 + [K] Predicted transcriptional regulator 1615 cds-WP_002210572.1 CDS COG1411 3207347 3207754 + [R] Uncharacterized protein related to proFAR isomerase cds-WP_002210573.1 CDS NA 3207779 3208039 + NA 1616 clcB CDS COG0038 3208429 3209709 + [P] Chloride channel protein EriC 1617 bioD CDS COG0132 3209832 3210500 - [H] Dethiobiotin synthetase 1618 cds-WP_002210576.1 CDS COG1940 3210724 3211941 - [KG] Transcriptional regulator/sugar kinase 1619 cds-WP_002214502.1 CDS NA 3212155 3212754 - NA 1620 cds-WP_002364971.1 CDS COG0583 3212832 3213020 - [K] Transcriptional regulator 1621 cds-A1122_RS14915 CDS COG0477 3213341 3214552 + [GEPR] Permeases of the major facilitator superfamily 1622 tus CDS NA 3214757 3215692 + NA 1623 fumC CDS COG0114 3215772 3217169 - [C] Fumarase 1624 manA CDS COG1482 3217453 3218628 + [G] Phosphomannose isomerase 1625 cds-WP_002216605.1 CDS COG5339 3218868 3220412 + [S] Uncharacterized protein conserved in bacteria 1626 cds-WP_002210583.1 CDS NA 3220461 3221060 - NA 1627 cds-WP_002210584.1 CDS COG0385 3221266 3222294 - [R] Predicted Na+-dependent transporter 1628 cds-WP_002210585.1 CDS COG0673 3222488 3223537 - [R] Predicted dehydrogenases and related proteins 1629 araC CDS COG2207 3223665 3224597 - [K] AraC-type DNA-binding domain-containing proteins 1630 araH CDS COG1172 3224818 3225867 - [G] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components araG CDS COG1129 3225885 3227456 - [G] ABC-type sugar transport system, ATPase component 1631 cds-WP_002210589.1 CDS ROG3781 3227554 3228537 - NA 1632 cds-WP_002210590.1 CDS COG1069 3228945 3230648 + [C] Ribulose kinase araA CDS COG2160 3230732 3232234 + [G] L-arabinose isomerase 1633 cds-WP_002210593.1 CDS COG2274 3232424 3234562 - [V] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal cds-WP_002215882.1 CDS NA 3234564 3234932 - NA cds-WP_002215881.1 CDS COG1566 3234932 3235933 - [V] Multidrug resistance efflux pump cds-WP_002215880.1 CDS COG1132 3235958 3236179 - [V] ABC-type multidrug transport system, ATPase and cds-WP_002215879.1 CDS COG2274 3236232 3238016 - [V] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal 1634 cds-WP_002210594.1 CDS NA 3238491 3238934 + NA 1635 rsxA CDS COG4657 3239062 3239643 + [C] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA rsxB CDS COG2878 3239643 3240209 + [C] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB rsxC CDS COG4656 3240259 3242121 + [C] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 1636 cds-WP_002210598.1 CDS COG2207 3242226 3243119 - [K] AraC-type DNA-binding domain-containing proteins 1637 rsxD CDS COG4658 3243608 3244702 + [C] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD rsxG CDS COG4659 3244712 3245341 + [C] Predicted NADH:ubiquinone oxidoreductase, subunit RnfG cds-WP_002210601.1 CDS COG4660 3245338 3246039 + [C] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE nth CDS COG0177 3246036 3246677 + [L] Predicted EndoIII-related endonuclease 1638 denD CDS COG0451 3246860 3247858 - [MG] Nucleoside-diphosphate-sugar epimerases cds-WP_002210604.1 CDS COG2271 3247896 3249206 - [G] Sugar phosphate permease 1639 cds-WP_002210605.1 CDS COG4776 3249855 3251789 + [K] Exoribonuclease II 1640 cds-WP_002210606.1 CDS COG1966 3252139 3254205 + [T] Carbon starvation protein, predicted membrane protein cds-WP_002210607.1 CDS COG2879 3254198 3254503 + [S] Uncharacterized small protein 1641 fsa CDS COG0176 3254620 3255285 - [G] Transaldolase 1642 cds-WP_002210609.1 CDS COG5460 3255619 3255867 + [S] Uncharacterized conserved protein 1643 araD CDS COG0235 3255896 3256591 - [G] Ribulose-5-phosphate 4-epimerase and related epimerases and 1644 osmB CDS ROG6708 3257071 3257286 + NA 1645 yciH CDS COG0023 3257524 3257850 - [J] Translation initiation factor 1 (eIF-1/SUI1) and pyrF CDS COG0284 3257850 3258587 - [F] Orotidine-5'-phosphate decarboxylase 1646 cds-WP_002210614.1 CDS ROG6594 3259057 3259356 + NA 1647 lapB CDS COG2956 3259478 3260647 - [G] Predicted N-acetylglucosaminyl transferase cds-WP_002210616.1 CDS COG3771 3260654 3260965 - [S] Predicted membrane protein 1648 pgpB CDS COG0671 3261134 3261895 - [I] Membrane-associated phospholipid phosphatase 1649 ribA CDS COG0807 3262401 3262991 + [H] GTP cyclohydrolase II 1650 acnA CDS COG1048 3263155 3265827 - [C] Aconitase A 1651 cds-WP_002210620.1 CDS NA 3266191 3267048 - NA 1652 cysB CDS COG0583 3267384 3268358 - [K] Transcriptional regulator 1653 topA CDS COG0550 3268755 3271370 - [L] Topoisomerase IA cds-WP_002228458.1 CDS NA 3271397 3271696 - NA 1654 cds-WP_002210623.1 CDS NA 3271789 3272040 + NA 1655 sohB CDS COG0616 3272159 3273205 - [OU] Periplasmic serine proteases (ClpP class) 1656 cds-WP_002210625.1 CDS COG1028 3273377 3274138 + [IQR] Dehydrogenases with different specificities (related to cobO CDS COG2109 3274155 3274745 + [H] ATP:corrinoid adenosyltransferase 1657 rluB CDS COG1187 3274868 3275902 - [J] 16S rRNA uridine-516 pseudouridylate synthase and 1658 cds-WP_002210628.1 CDS COG0009 3276249 3276869 - [J] Putative translation factor (SUA5) cds-WP_002227929.1 CDS COG0613 3276886 3277785 - [R] Predicted metal-dependent phosphoesterases (PHP family) 1659 trpL CDS NA 3278059 3278121 + NA 1660 cds-WP_002228454.1 CDS COG0147 3278240 3279802 + [EH] Anthranilate/para-aminobenzoate synthases component I trpD CDS COG0512 3279802 3281393 + [EH] Anthranilate/para-aminobenzoate synthases component II trpCF CDS COG0134 3281397 3282824 + [E] Indole-3-glycerol phosphate synthase trpB CDS COG0133 3282981 3284171 + [E] Tryptophan synthase beta chain trpA CDS COG0159 3284171 3284977 + [E] Tryptophan synthase alpha chain 1661 cds-WP_002210636.1 CDS COG2823 3285320 3285634 + [R] Predicted periplasmic or secreted lipoprotein 1662 ompW CDS COG3047 3285781 3286416 - [M] Outer membrane protein W 1663 cds-WP_002210638.1 CDS NA 3286525 3286740 - NA 1664 cds-WP_002210639.1 CDS ROG3022 3286902 3287672 + NA 1665 cds-WP_002215979.1 CDS COG0659 3287793 3288413 - [P] Sulfate permease and related transporters (MFS cds-WP_002215978.1 CDS COG0659 3288445 3289527 - [P] Sulfate permease and related transporters (MFS 1666 cds-WP_002210640.1 CDS COG2917 3289758 3290300 + [D] Intracellular septation protein A yciA CDS COG1607 3290380 3290829 + [I] Acyl-CoA hydrolase 1667 cds-WP_002209743.1-9 CDS COG3328 3290977 3292185 + [L] Transposase and inactivated derivatives 1668 tonB CDS COG0810 3292221 3292979 - [M] Periplasmic protein TonB, links inner and 1669 cds-WP_002210643.1 CDS COG2350 3293280 3293576 + [S] Uncharacterized protein conserved in bacteria 1670 cds-WP_002217646.1 CDS COG3809 3293799 3294044 + [S] Uncharacterized protein conserved in bacteria 1671 cds-WP_002210644.1 CDS NA 3294160 3294423 - NA 1672 cds-WP_002210646.1 CDS COG3637 3294644 3295183 - [M] Opacity protein and related surface antigens 1673 cds-WP_002388651.1 CDS NA 3295605 3295781 - NA 1674 cds-WP_190947803.1 CDS NA 3296013 3296123 + NA 1675 cls CDS COG1502 3296223 3297683 + [I] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 1676 cds-WP_002210649.1 CDS COG3099 3297848 3298171 + [S] Uncharacterized protein conserved in bacteria 1677 cds-WP_002210650.1 CDS COG3111 3298470 3298685 - [S] Uncharacterized conserved protein 1678 oppF CDS COG4608 3299246 3300247 - [E] ABC-type oligopeptide transport system, ATPase component cds-WP_002210652.1 CDS COG0444 3300244 3301245 - [EP] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component oppC CDS COG1173 3301257 3302165 - [EP] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components oppB CDS COG0601 3302181 3303101 - [EP] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components oppA CDS COG4166 3303188 3304825 - [E] ABC-type oligopeptide transport system, periplasmic component 1679 cds-WP_002210656.1 CDS COG2095 3305662 3306306 - [U] Multiple antibiotic transporter 1680 adhE CDS COG1454 3307113 3309788 + [C] Alcohol dehydrogenase, class IV 1681 istA_32 CDS COG4584 3310328 3311350 + [L] Transposase and inactivated derivatives istB_32 CDS COG1484 3311347 3312129 + [L] DNA replication protein 1682 cds-WP_002210659.1 CDS COG1435 3312498 3313088 - [F] Thymidine kinase 1683 hns CDS COG2916 3313838 3314248 + [R] DNA-binding protein H-NS 1684 cds-WP_002210664.1 CDS COG1004 3314683 3316029 - [M] Predicted UDP-glucose 6-dehydrogenase 1685 rssB CDS COG2204 3316336 3317352 - [T] Response regulator containing CheY-like receiver, AAA-type 1686 cds-WP_002210666.1 CDS COG3012 3318686 3319150 + [S] Uncharacterized protein conserved in bacteria purU CDS COG0788 3319234 3320103 + [F] Formyltetrahydrofolate hydrolase 1687 cds-WP_002209743.1-10 CDS COG3328 3320066 3321274 - [L] Transposase and inactivated derivatives 1688 rna-A1122_RS15400 tRNA NA 3321554 3321638 + NA 1689 cds-WP_002211665.1 CDS COG0583 3321973 3322833 - [K] Transcriptional regulator 1690 xthA CDS COG0708 3323643 3324449 + [L] Exonuclease III 1691 cds-WP_002211668.1 CDS COG1051 3324547 3324933 + [F] ADP-ribose pyrophosphatase 1692 cds-WP_002211669.1 CDS NA 3324946 3325236 - NA cds-WP_002211670.1 CDS COG0550 3325233 3327158 - [L] Topoisomerase IA selD CDS COG0709 3327220 3328266 - [E] Selenophosphate synthase 1693 cds-WP_002211673.1 CDS COG0778 3328491 3329042 - [C] Nitroreductase 1694 sppA CDS COG0616 3329205 3331055 + [OU] Periplasmic serine proteases (ClpP class) ansA CDS COG0252 3331172 3332188 + [EJ] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D pncA CDS COG1335 3332203 3332850 + [Q] Amidases related to nicotinamidase 1695 cds-WP_002217933.1 CDS COG3139 3332984 3333256 - [S] Uncharacterized protein conserved in bacteria msrB CDS COG0229 3333327 3333740 - [O] Conserved domain frequently associated with peptide 1696 gapA CDS COG0057 3334088 3335083 + [G] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 1697 cds-WP_002211679.1 CDS COG0676 3335397 3336272 + [G] Uncharacterized enzymes related to aldose 1-epimerase 1698 cds-WP_002211680.1 CDS COG3713 3336345 3337115 - [M] Outer membrane protein V 1699 cds-WP_002221841.1 CDS NA 3337278 3337490 - NA 1700 yeaG CDS COG2766 3337538 3339472 + [T] Putative Ser protein kinase cds-WP_002216501.1 CDS COG2718 3339622 3340896 + [S] Uncharacterized conserved protein 1701 cds-WP_002211683.1 CDS COG0697 3341004 3342122 + [GER] Permeases of the drug/metabolite transporter (DMT) 1702 cds-WP_002211684.1 CDS COG0583 3342157 3343062 - [K] Transcriptional regulator 1703 cds-WP_002211685.1 CDS COG1741 3343260 3344129 + [R] Pirin-related protein 1704 cds-A1122_RS15505 CDS COG2814 3344394 3345583 + [G] Arabinose efflux permease 1705 cds-WP_002211686.1 CDS COG0665 3345612 3346916 - [E] Glycine/D-amino acid oxidases (deaminating) 1706 cds-WP_002211687.1 CDS COG2719 3347381 3348916 + [S] Uncharacterized conserved protein 1707 fadR CDS COG2186 3349134 3349853 - [K] Transcriptional regulators 1708 nhaB CDS COG3067 3350097 3351671 + [P] Na+/H+ antiporter 1709 dsbB CDS COG1495 3351907 3352437 + [O] Disulfide bond formation protein DsbB 1710 cds-WP_214442623.1 CDS ROG0525 3352581 3352742 + NA 1711 cds-WP_002214494.1 CDS NA 3352854 3353210 - NA 1712 cds-WP_002211692.1 CDS ROG1585 3354302 3355042 + NA cds-WP_002211693.1 CDS COG1104 3355059 3356258 + [E] Cysteine sulfinate desulfinase/cysteine desulfurase and related cds-WP_002214492.1 CDS NA 3356262 3357434 + NA 1713 cds-WP_002209743.1-11 CDS COG3328 3357739 3358947 + [L] Transposase and inactivated derivatives 1714 cds-WP_002211695.1 CDS NA 3359168 3359587 - NA cds-WP_002211696.1 CDS NA 3359598 3360515 - NA cds-WP_002211697.1 CDS NA 3360532 3361530 - NA cds-WP_002211698.1 CDS COG4733 3361530 3364733 - [S] Phage-related protein, tail component 1715 cds-WP_002359202.1 CDS NA 3364909 3365130 + NA 1716 cds-WP_002211699.1 CDS COG3132 3365099 3365263 - [S] Uncharacterized protein conserved in bacteria cds-WP_002211700.1 CDS COG4723 3365305 3365925 - [S] Phage-related protein, tail component cds-WP_002211701.1 CDS NA 3365981 3366196 - NA 1717 cds-WP_002214482.1 CDS ROG5746 3366339 3366890 - NA 1718 cds-WP_002211704.1 CDS COG3617 3366989 3367996 - [K] Prophage antirepressor 1719 cds-WP_002211705.1 CDS NA 3368070 3368237 - NA 1720 cds-WP_002211706.1 CDS ROG6594 3368361 3368792 + NA 1721 cds-WP_002211707.1 CDS NA 3368871 3369503 - NA 1722 cds-WP_002211708.1 CDS COG1310 3369764 3370474 - [R] Predicted metal-dependent protease of the PAD1/JAB1 cds-WP_002211709.1 CDS COG4672 3370477 3371229 - [S] Phage-related protein 1723 tnpA_49 CDS COG1943 3371350 3371808 - [L] Transposase and inactivated derivatives 1724 cds-WP_002211710.1 CDS COG4718 3372113 3372454 - [S] Phage-related protein cds-WP_002211711.1 CDS COG5281 3372457 3375960 - [S] Phage-related minor tail protein cds-WP_002214476.1 CDS NA 3375961 3376182 - NA 1725 cds-WP_002211712.1 CDS NA 3376269 3376580 - NA cds-WP_002211713.1 CDS COG5492 3376593 3377513 - [N] Bacterial surface proteins containing Ig-like domains 1726 cds-WP_002211714.1 CDS ROG6496 3377579 3377986 - NA cds-WP_002211715.1 CDS ROG1027 3377983 3378567 - NA cds-WP_002211716.1 CDS NA 3378569 3378919 - NA cds-WP_002211717.1 CDS NA 3378921 3379175 - NA cds-WP_002211718.1 CDS ROG6022 3379172 3379654 - NA cds-WP_002211719.1 CDS COG5492 3379702 3380907 - [N] Bacterial surface proteins containing Ig-like domains cds-WP_002211720.1 CDS NA 3380921 3381694 - NA 1727 cds-WP_002211721.1 CDS ROG7908 3381816 3382928 - NA cds-WP_002228446.1 CDS ROG5565 3382929 3383570 - NA cds-WP_002228445.1 CDS ROG5565 3383589 3384317 - NA cds-A1122_RS15725 CDS ROG0786 3384317 3385258 - NA cds-WP_002209743.1-12 CDS COG3328 3385296 3386504 - [L] Transposase and inactivated derivatives 1728 cds-A1122_RS15735 CDS ROG0786 3386576 3387130 - NA cds-WP_002211724.1 CDS COG5556 3387140 3387589 - [S] Uncharacterized conserved protein cds-WP_002211725.1 CDS ROG6057 3387620 3388255 - NA 1729 cds-WP_002211727.1 CDS COG3645 3388712 3389425 - [S] Uncharacterized phage-encoded protein 1730 cds-WP_002211729.1 CDS NA 3389971 3390429 - NA cds-WP_002211730.1 CDS COG3772 3390414 3390926 - [R] Phage-related lysozyme (muraminidase) cds-WP_002430108.1 CDS NA 3390957 3391154 - NA 1731 cds-WP_002215644.1 CDS NA 3391400 3391675 + NA 1732 cds-WP_002211731.1 CDS NA 3391672 3391881 - NA 1733 cds-WP_002211732.1 CDS COG3617 3392305 3392868 - [K] Prophage antirepressor 1734 cds-WP_002215636.1 CDS NA 3393139 3393528 - NA cds-WP_002211735.1 CDS NA 3393529 3394134 - NA 1735 cds-WP_002211736.1 CDS NA 3394208 3394654 - NA 1736 cds-WP_002211737.1 CDS COG0338 3394681 3395379 + [L] Site-specific DNA methylase 1737 cds-WP_002215632.1 CDS NA 3395679 3395939 + NA 1738 istB_33 CDS COG1484 3396107 3396889 - [L] DNA replication protein istA_33 CDS COG4584 3396886 3397908 - [L] Transposase and inactivated derivatives 1739 cds-WP_002211738.1 CDS COG0582 3397978 3399216 + [L] Integrase 1740 cds-WP_002211739.1 CDS COG2983 3399243 3399689 - [S] Uncharacterized conserved protein 1741 cds-WP_002211740.1 CDS COG0179 3399792 3400448 - [Q] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 1742 cds-A1122_RS15845 CDS COG2951 3400519 3401450 - [M] Membrane-bound lytic murein transglycosylase B 1743 cds-WP_002211742.1 CDS NA 3401452 3401664 + NA 1744 cds-WP_002211743.1 CDS COG3100 3401747 3402019 - [S] Uncharacterized protein conserved in bacteria 1745 minC CDS COG0850 3402740 3403426 + [D] Septum formation inhibitor minD CDS COG2894 3403451 3404263 + [D] Septum formation inhibitor-activating ATPase minE CDS COG0851 3404267 3404536 + [D] Septum formation topological specificity factor 1746 rnd CDS COG0349 3404773 3405894 - [J] Ribonuclease D 1747 fadD CDS COG0318 3406054 3407742 - [IQ] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 1748 cds-WP_087768167.1 CDS NA 3408277 3408384 + NA 1749 cds-A1122_RS15880 CDS COG3065 3408385 3408989 - [M] Starvation-inducible outer membrane lipoprotein 1750 tsaB CDS COG1214 3409126 3409824 - [O] Inactive homolog of metal-dependent proteases, putative cds-WP_002211185.1 CDS COG1199 3409896 3411800 - [KL] Rad3-related DNA helicases 1751 cds-WP_002211186.1 CDS ROG6975 3411931 3412275 + NA 1752 mdtI CDS COG2076 3412407 3412736 - [P] Membrane transporters of cations and cationic mdtJ CDS COG2076 3412723 3413166 - [P] Membrane transporters of cations and cationic 1753 cds-WP_002211190.1 CDS COG0800 3413881 3414522 - [G] 2-keto-3-deoxy-6-phosphogluconate aldolase zwf CDS COG0364 3414764 3416248 - [G] Glucose-6-phosphate 1-dehydrogenase 1754 cds-WP_002211192.1 CDS COG1737 3416601 3417470 + [K] Transcriptional regulators 1755 pyk CDS COG0469 3417800 3419242 + [G] Pyruvate kinase 1756 cds-A1122_RS24015 CDS NA 3419396 3419473 + NA 1757 lpxM CDS COG1560 3419587 3420549 - [M] Lauroyl/myristoyl acyltransferase 1758 mepM CDS COG0739 3420816 3422132 - [M] Membrane proteins related to metalloendopeptidases znuA CDS COG4531 3422153 3423109 - [P] ABC-type Zn2+ transport system, periplasmic component/surface 1759 znuC CDS COG1121 3423185 3423943 + [P] ABC-type Mn/Zn transport systems, ATPase component znuB CDS COG1108 3423940 3424725 + [P] ABC-type Mn2+/Zn2+ transport systems, permease components 1760 ruvB CDS COG2255 3424780 3425784 - [L] Holliday junction resolvasome, helicase subunit ruvA CDS COG0632 3425946 3426560 - [L] Holliday junction resolvasome, DNA-binding subunit 1761 cds-WP_308417124.1 CDS NA 3426640 3426798 - NA ruvC CDS COG0817 3426843 3427364 - [L] Holliday junction resolvasome, endonuclease subunit cds-WP_002211202.1 CDS COG0217 3427573 3428316 - [S] Uncharacterized conserved protein nudB CDS COG0494 3428374 3428817 - [LR] NTP pyrophosphohydrolases including oxidative damage repair aspS CDS COG0173 3428817 3430613 - [J] Aspartyl-tRNA synthetase 1762 cds-WP_002211205.1 CDS COG1801 3431423 3432238 + [S] Uncharacterized conserved protein cds-WP_002211206.1 CDS COG3788 3432418 3432813 + [R] Uncharacterized relative of glutathione S-transferase, MAPEG 1763 cmoA CDS COG0500 3433004 3433807 + [QR] SAM-dependent methyltransferases cmoB CDS COG0500 3433804 3434775 + [QR] SAM-dependent methyltransferases 1764 cutC CDS COG3142 3434968 3435732 - [P] Uncharacterized protein involved in copper resistance 1765 cds-WP_002211210.1 CDS COG3102 3435964 3436539 - [S] Uncharacterized protein conserved in bacteria 1766 argS CDS COG0018 3437158 3438888 + [J] Arginyl-tRNA synthetase 1767 cds-WP_002227945.1 CDS COG3210 3439119 3443849 - [U] Large exoproteins involved in heme utilization cds-WP_002211213.1 CDS COG2831 3443879 3445540 - [U] Hemolysin activation/secretion protein 1768 murJ CDS COG0728 3446012 3447547 - [R] Uncharacterized membrane protein, putative virulence factor 1769 cds-WP_002354211.1 CDS COG0673 3447814 3448725 - [R] Predicted dehydrogenases and related proteins cds-A1122_RS24420 CDS COG3132 3448786 3449424 - [S] Uncharacterized protein conserved in bacteria rimJ CDS COG1670 3449432 3450016 - [J] Acetyltransferases, including N-acetylases of ribosomal proteins 1770 mdtH CDS NA 3450310 3451515 + NA 1771 cds-WP_002211218.1 CDS ROG2451 3451910 3452473 + NA 1772 cds-WP_002211220.1 CDS COG3381 3452770 3453330 - [R] Uncharacterized component of anaerobic dehydrogenases cds-WP_002211221.1 CDS COG1387 3453367 3454104 - [ER] Histidinol phosphatase and related hydrolases of 1773 rna-A1122_RS16065 tRNA NA 3454393 3454482 + NA 1774 cds-WP_002211222.1 CDS COG1940 3454739 3455851 - [KG] Transcriptional regulator/sugar kinase cds-WP_002211223.1 CDS COG0584 3455865 3456695 - [C] Glycerophosphoryl diester phosphodiesterase 1775 cds-A1122_RS16080 CDS COG3842 3456910 3457215 + [E] ABC-type spermidine/putrescine transport systems, ATPase components 1776 tnpA_50 CDS COG1943 3457324 3457782 - [L] Transposase and inactivated derivatives 1777 cds-A1122_RS16090 CDS COG3842 3457926 3458687 + [E] ABC-type spermidine/putrescine transport systems, ATPase components cds-WP_002211226.1 CDS COG1176 3458684 3459550 + [E] ABC-type spermidine/putrescine transport system, permease component cds-WP_002211227.1 CDS COG1178 3459547 3460383 + [P] ABC-type Fe3+ transport system, permease component cds-WP_002211228.1 CDS COG4134 3460403 3461485 + [R] ABC-type uncharacterized transport system, periplasmic component 1778 cds-WP_002211229.1 CDS COG0584 3461786 3462661 + [C] Glycerophosphoryl diester phosphodiesterase 1779 rna-A1122_RS16115 tRNA NA 3462803 3462892 + NA 1780 dauA CDS COG0659 3463728 3464999 + [P] Sulfate permease and related transporters (MFS 1781 istA_34 CDS COG4584 3465087 3466109 + [L] Transposase and inactivated derivatives istB_34 CDS COG1484 3466106 3466888 + [L] DNA replication protein 1782 cds-A1122_RS16140 CDS COG0659 3466956 3467384 + [P] Sulfate permease and related transporters (MFS 1783 tnpA_51 CDS COG1943 3467508 3467966 - [L] Transposase and inactivated derivatives 1784 kdsA CDS COG2877 3468448 3469302 - [M] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 1785 sirB1 CDS COG2912 3469398 3470207 - [S] Uncharacterized conserved protein cds-WP_002403679.1 CDS COG3094 3470204 3470605 - [S] Uncharacterized protein conserved in bacteria prmC CDS COG2890 3470669 3471499 - [J] Methylase of polypeptide chain release factors prfA CDS COG0216 3471499 3472581 - [J] Protein chain release factor A hemA CDS COG0373 3472614 3473876 - [H] Glutamyl-tRNA reductase 1786 lolB CDS COG3017 3474182 3474805 + [M] Outer membrane lipoprotein involved in outer ispE CDS COG1947 3474807 3475706 + [I] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase prs CDS COG0462 3476047 3476994 + [FE] Phosphoribosylpyrophosphate synthetase 1787 ychH CDS NA 3477196 3477468 - NA 1788 pth CDS COG0193 3477830 3478420 + [J] Peptidyl-tRNA hydrolase ychF CDS COG0012 3478584 3479675 + [J] Predicted GTPase, probable translation factor 1789 cds-A1122_RS23390 CDS ROG1485 3479888 3480813 + NA 1790 cds-WP_002211247.1 CDS COG0607 3480861 3481259 - [P] Rhodanese-related sulfurtransferase cds-WP_002211248.1 CDS COG0657 3481267 3482097 - [I] Esterase/lipase cds-WP_002216887.1 CDS NA 3482094 3482750 - NA 1791 cds-WP_002211249.1 CDS NA 3483381 3484223 + NA 1792 cds-WP_002211250.1 CDS ROG2207 3484432 3485127 - NA cds-WP_002211251.1 CDS COG0716 3485142 3485807 - [C] Flavodoxins 1793 cds-WP_002211252.1 CDS COG1073 3485998 3487089 - [R] Hydrolases of the alpha/beta superfamily 1794 cds-WP_002211253.1 CDS COG0745 3487354 3488046 + [TK] Response regulators consisting of a CheY-like cds-WP_002211254.1 CDS COG5002 3488058 3489443 + [T] Signal transduction histidine kinase 1795 cds-WP_002211255.1 CDS COG0599 3489720 3490142 + [S] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit cds-WP_002211256.1 CDS COG1917 3490197 3490667 + [S] Uncharacterized conserved protein, contains double-stranded beta-helix 1796 cds-WP_002211257.1 CDS ROG1360 3490880 3491953 + NA 1797 cds-WP_002211258.1 CDS COG1413 3492744 3493649 + [C] FOG: HEAT repeat cds-WP_002211259.1 CDS NA 3493655 3494587 + NA cds-WP_002211260.1 CDS NA 3494574 3495524 + NA cds-WP_002214321.1 CDS NA 3495570 3495713 + NA 1798 cds-WP_002211261.1 CDS COG3967 3495865 3496545 + [M] Short-chain dehydrogenase involved in D-alanine esterification 1799 cds-WP_002211262.1 CDS COG0500 3496650 3497309 + [QR] SAM-dependent methyltransferases 1800 cds-WP_002211263.1 CDS COG0698 3497444 3498082 - [G] Ribose 5-phosphate isomerase RpiB 1801 cds-WP_002211265.1 CDS NA 3498329 3500440 - NA 1802 cds-WP_002211266.1 CDS COG2849 3501018 3503180 + [S] Uncharacterized protein conserved in bacteria 1803 cds-WP_002209743.1-13 CDS COG3328 3503300 3504508 - [L] Transposase and inactivated derivatives 1804 cds-WP_002211267.1 CDS NA 3504627 3506285 + NA 1805 cds-WP_002211268.1 CDS NA 3506455 3506919 + NA 1806 cds-WP_002211269.1 CDS COG1819 3507080 3508267 - [GC] Glycosyl transferases, related to UDP-glucuronosyltransferase cds-WP_002211270.1 CDS NA 3508264 3508848 - NA cds-WP_002214329.1 CDS NA 3508845 3509999 - NA cds-WP_002211271.1 CDS COG0451 3509999 3510961 - [MG] Nucleoside-diphosphate-sugar epimerases cds-WP_002211273.1 CDS COG1541 3511095 3512381 - [H] Coenzyme F390 synthetase cds-WP_002214335.1 CDS COG1237 3512378 3513184 - [R] Metal-dependent hydrolases of the beta-lactamase superfamily cds-WP_002211275.1 CDS COG0702 3513177 3514193 - [MG] Predicted nucleoside-diphosphate-sugar epimerases cds-WP_002214337.1 CDS COG0332 3514207 3514737 - [I] 3-oxoacyl-[acyl-carrier-protein] synthase III cds-WP_002214339.1 CDS COG0332 3514706 3515215 - [I] 3-oxoacyl-[acyl-carrier-protein] synthase III 1807 cds-WP_002211277.1 CDS NA 3516224 3517828 + NA 1808 cds-WP_002211278.1 CDS COG3758 3518006 3518578 - [S] Uncharacterized protein conserved in bacteria cds-WP_002211279.1 CDS COG0402 3518578 3519948 - [FR] Cytosine deaminase and related metal-dependent hydrolases 1809 hutC CDS COG2188 3520096 3520863 + [K] Transcriptional regulators hutI CDS COG1228 3521067 3522287 + [Q] Imidazolonepropionase and related amidohydrolases hutG CDS COG3741 3522284 3523090 + [E] N-formylglutamate amidohydrolase 1810 cds-A1122_RS22815 CDS COG3203 3523387 3523599 - [M] Outer membrane protein (porin) 1811 istB_35 CDS COG1484 3523667 3524449 - [L] DNA replication protein istA_35 CDS COG4584 3524446 3525468 - [L] Transposase and inactivated derivatives 1812 cds-WP_002215428.1 CDS NA 3525946 3526131 + NA cds-WP_002213183.1 CDS NA 3526147 3526371 + NA 1813 ugpC_3 CDS COG3839 3526381 3527498 - [G] ABC-type sugar transport systems, ATPase components cds-WP_002213186.1 CDS COG0395 3527523 3528350 - [G] ABC-type sugar transport system, permease component cds-WP_002213188.1 CDS COG1175 3528343 3529203 - [G] ABC-type sugar transport systems, permease components cds-WP_002213190.1 CDS COG1653 3529270 3530538 - [G] ABC-type sugar transport system, periplasmic component cds-WP_002213192.1 CDS COG0673 3530568 3531581 - [R] Predicted dehydrogenases and related proteins 1814 cds-WP_002213201.1 CDS COG2188 3532249 3533046 - [K] Transcriptional regulators 1815 cds-A1122_RS24425 CDS NA 3533132 3533337 - NA cds-A1122_RS22835 CDS COG2801 3533391 3533720 - [L] Transposase and inactivated derivatives 1816 cds-WP_002215417.1 CDS ROG0768 3534015 3534449 + NA cds-WP_002213205.1 CDS NA 3534461 3535030 + NA 1817 cds-A1122_RS16515 CDS COG3328 3535448 3536646 - [L] Transposase and inactivated derivatives cds-WP_002213208.1 CDS ROG5285 3536694 3537770 - NA 1818 cds-WP_002213209.1 CDS COG3514 3537836 3538126 - [S] Uncharacterized protein conserved in bacteria cds-WP_002213210.1 CDS COG2929 3538107 3538379 - [S] Uncharacterized protein conserved in bacteria 1819 cds-WP_002213211.1 CDS COG4540 3538515 3538769 + [R] Phage P2 baseplate assembly protein gpV cds-WP_002213212.1 CDS COG3628 3538766 3539065 + [R] Phage baseplate assembly protein W cds-WP_002215413.1 CDS NA 3539082 3539369 + NA 1820 cds-A1122_RS16555 CDS NA 3539804 3540321 + NA cds-WP_002215410.1 CDS ROG0433 3540302 3540580 + NA 1821 cds-WP_002213214.1 CDS COG3497 3540745 3540885 + [R] Phage tail sheath protein FI cds-WP_086016636.1 CDS ROG3826 3540933 3541386 + NA cds-WP_086016636.1_2 CDS NA 3541386 3542446 + NA 1822 tssD CDS COG3157 3542666 3543010 + [S] Hemolysin-coregulated protein (uncharacterized) 1823 cds-WP_002213223.1 CDS NA 3543227 3543409 - NA 1824 cds-WP_002213226.1 CDS COG3475 3543601 3543774 - [M] LPS biosynthesis protein 1825 cds-WP_002215401.1 CDS COG0305 3544534 3544761 - [L] Replicative DNA helicase 1826 cds-WP_002215398.1 CDS NA 3545320 3545544 + NA 1827 rna-A1122_RS16610 tRNA NA 3545685 3545770 - NA rna-A1122_RS16615 tRNA NA 3545781 3545854 - NA rna-A1122_RS16620 tRNA NA 3545907 3545982 - NA 1828 pgsA CDS COG0558 3546127 3546675 - [I] Phosphatidylglycerophosphate synthase uvrC CDS COG0322 3546734 3548566 - [L] Nuclease subunit of the excinuclease complex uvrY CDS COG2197 3548559 3549215 - [TK] Response regulator containing a CheY-like receiver 1829 cds-WP_002211175.1 CDS NA 3549878 3550102 + NA 1830 cds-WP_002218408.1 CDS COG3136 3550230 3550571 + [R] Uncharacterized membrane protein required for alginate 1831 cds-WP_002211173.1 CDS NA 3550599 3550853 - NA 1832 cds-WP_002211172.1 CDS COG3637 3551193 3551744 - [M] Opacity protein and related surface antigens 1833 rna-A1122_RS16660 tRNA NA 3552431 3552506 - NA 1834 cycA CDS COG1113 3552868 3554283 + [E] Gamma-aminobutyrate permease and related permeases 1835 cds-WP_002211169.1 CDS COG3055 3554409 3555587 - [S] Uncharacterized protein conserved in bacteria 1836 wrbA CDS COG0655 3555981 3556580 + [R] Multimeric flavodoxin WrbA 1837 efeB CDS COG2837 3556666 3557970 - [P] Predicted iron-dependent peroxidase efeO CDS COG2822 3557981 3559111 - [P] Predicted periplasmic lipoprotein involved in iron efeU CDS COG0672 3559141 3559989 - [P] High-affinity Fe2+/Pb2+ permease 1838 putP CDS COG0591 3560322 3561806 - [ER] Na+/proline symporter cds-WP_002211163.1 CDS NA 3561836 3562033 - NA 1839 putA CDS COG4230 3562378 3566349 + [C] Delta 1-pyrroline-5-carboxylate dehydrogenase 1840 cds-WP_002211161.1 CDS NA 3566855 3567148 + NA cds-WP_002216048.1 CDS COG4190 3567182 3567520 + [K] Predicted transcriptional regulator 1841 cds-A1122_RS24430 CDS NA 3567658 3567726 - NA 1842 tcyN CDS COG1126 3567812 3568573 - [E] ABC-type polar amino acid transport system, tcyL CDS COG0765 3568576 3569238 - [E] ABC-type amino acid transport system, permease tcyJ CDS COG0834 3569238 3570038 - [ET] ABC-type amino acid transport/signal transduction systems, 1843 cds-WP_002227959.1 CDS COG2515 3570162 3571154 - [E] 1-aminocyclopropane-1-carboxylate deaminase 1844 fliZ CDS ROG4495 3571443 3571952 - NA 1845 cds-WP_002211153.1 CDS COG1191 3572174 3572896 - [K] DNA-directed RNA polymerase specialized sigma subunit cds-WP_002211152.1 CDS COG1344 3573243 3574352 - [N] Flagellin and related hook-associated proteins 1846 fliD_2 CDS COG1345 3574649 3576049 + [N] Flagellar capping protein fliS_2 CDS COG1516 3576060 3576458 + [NUO] Flagellin-specific chaperone FliS fliT CDS ROG0925 3576469 3576831 + NA 1847 cds-WP_002211147.1 CDS COG2207 3577132 3578007 + [K] AraC-type DNA-binding domain-containing proteins 1848 cds-WP_002229284.1 CDS COG2972 3578361 3580274 + [T] Predicted signal transduction protein with a 1849 cds-WP_002228542.1 CDS COG2206 3580411 3581316 + [T] HD-GYP domain 1850 cds-WP_002211145.1 CDS COG0122 3581477 3582088 + [L] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 1851 cds-WP_002215992.1 CDS COG3654 3582274 3582750 - [R] Prophage maintenance system killer protein cds-WP_002215991.1 CDS NA 3582761 3582940 - NA 1852 cds-A1122_RS22850 CDS NA 3583094 3583276 - NA 1853 fliE_2 CDS COG1677 3583360 3583671 - [NU] Flagellar hook-basal body protein 1854 fliF_2 CDS COG1766 3584024 3585736 + [NU] Flagellar biosynthesis/type III secretory pathway lipoprotein fliG CDS COG1536 3585733 3586725 + [N] Flagellar motor switch protein fliH_2 CDS COG1317 3586718 3587434 + [NU] Flagellar biosynthesis/type III secretory pathway protein fliI_2 CDS COG1157 3587397 3588851 + [NU] Flagellar biosynthesis/type III secretory pathway ATPase fliJ_2 CDS COG2882 3588951 3589397 + [NUO] Flagellar biosynthesis chaperone cds-WP_002211138.1 CDS COG3144 3589394 3590746 + [N] Flagellar hook-length control protein fliL CDS COG1580 3591013 3591483 + [N] Flagellar basal body-associated protein fliM CDS COG1868 3591489 3592490 + [N] Flagellar motor switch protein fliN_2 CDS COG1886 3592487 3592903 + [NU] Flagellar motor switch/type III secretory pathway fliO CDS COG3190 3592903 3593439 + [N] Flagellar biogenesis protein fliP_2 CDS COG1338 3593520 3594260 + [NU] Flagellar biosynthesis pathway, component FliP fliQ_2 CDS COG1987 3594366 3594635 + [NU] Flagellar biosynthesis pathway, component FliQ fliR CDS COG1684 3594638 3595420 + [NU] Flagellar biosynthesis pathway, component FliR 1855 cds-WP_002214976.1 CDS COG1724 3595627 3595809 + [N] Predicted periplasmic or secreted lipoprotein cds-WP_002211129.1 CDS COG1598 3595854 3596273 + [S] Uncharacterized conserved protein 1856 cds-WP_002211128.1 CDS COG0524 3596531 3597490 - [G] Sugar kinases, ribokinase family cds-WP_002214974.1 CDS COG1172 3597539 3598561 - [G] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components cds-WP_002211126.1 CDS COG1129 3598564 3600141 - [G] ABC-type sugar transport system, ATPase component cds-WP_002211125.1 CDS COG1879 3600207 3601202 - [G] ABC-type sugar transport system, periplasmic component cds-WP_002211124.1 CDS COG1172 3601245 3602324 - [G] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1857 cds-WP_002211122.1 CDS COG3347 3602454 3604520 - [S] Uncharacterized conserved protein 1858 cds-WP_002211121.1 CDS COG2390 3604738 3605739 + [K] Transcriptional regulator, contains sigma factor-related N-terminal 1859 flgL_2 CDS ROG2760 3605768 3606748 - NA 1860 flgK_2 CDS COG1256 3606887 3608551 - [N] Flagellar hook-associated protein 1861 flgJ CDS COG3951 3609422 3610366 - [MNO] Rod binding protein cds-WP_002211117.1 CDS COG1706 3610366 3611475 - [N] Flagellar basal-body P-ring protein flgH_2 CDS COG2063 3611490 3612179 - [N] Flagellar basal body L-ring protein flgG_2 CDS COG4786 3612323 3613033 - [N] Flagellar basal body rod protein flgF CDS COG4787 3613026 3613631 - [N] Flagellar basal body rod protein flgE_2 CDS COG1749 3613653 3614939 - [N] Flagellar hook protein FlgE flgD_2 CDS COG1843 3615141 3615818 - [N] Flagellar hook capping protein flgC_2 CDS COG1558 3615833 3616237 - [N] Flagellar basal body rod protein flgB_2 CDS COG1815 3616243 3616656 - [N] Flagellar basal body protein 1862 flgA_2 CDS COG1261 3616895 3617593 + [NO] Flagellar basal body P-ring biosynthesis protein flgM_2 CDS COG2747 3617744 3618046 + [KNU] Negative regulator of flagellin synthesis (anti-sigma28 cds-WP_002211107.1 CDS COG3418 3618065 3618505 + [NUO] Flagellar biosynthesis/type III secretory pathway chaperone 1863 inv CDS ROG3089 3618695 3620749 - NA 1864 tnpA_52 CDS COG1943 3620857 3621315 - [L] Transposase and inactivated derivatives 1865 inv_2 CDS ROG3089 3621461 3622309 - NA 1866 cds-WP_002211101.1 CDS NA 3622973 3623395 - NA flhA CDS COG1298 3623395 3625473 - [NU] Flagellar biosynthesis pathway, component FlhA flhB_2 CDS COG1377 3625473 3626633 - [NU] Flagellar biosynthesis pathway, component FlhB 1867 cds-WP_002211098.1 CDS NA 3627165 3627623 + NA cds-WP_002211097.1 CDS NA 3627617 3627943 + NA 1868 cds-WP_002211095.1 CDS NA 3628466 3628807 - NA 1869 copD CDS COG1276 3628904 3629788 - [P] Putative copper export protein yobA CDS COG2372 3629791 3630177 - [R] Uncharacterized protein, homolog of Cu resistance 1870 ftnA CDS COG1528 3630574 3631083 - [P] Ferritin-like protein 1871 cds-WP_002211091.1 CDS NA 3631484 3631714 + NA 1872 pip CDS COG0596 3631774 3632724 - [R] Predicted hydrolases or acyltransferases (alpha/beta hydrolase 1873 cds-WP_002211088.1 CDS COG1770 3633446 3635497 - [E] Protease II 1874 yebF CDS NA 3635807 3636217 - NA 1875 yqfB CDS COG3097 3636324 3636632 - [S] Uncharacterized protein conserved in bacteria cds-WP_002211085.1 CDS COG3141 3636672 3636992 - [S] Uncharacterized protein conserved in bacteria 1876 dbpA CDS COG0513 3637086 3638468 - [LKJ] Superfamily II DNA and RNA helicases 1877 purT CDS COG0027 3638781 3639962 + [F] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) 1878 cds-WP_002211082.1 CDS COG3140 3640088 3640345 - [S] Uncharacterized protein conserved in bacteria 1879 pabB CDS COG0147 3640510 3641886 + [EH] Anthranilate/para-aminobenzoate synthases component I cds-WP_002211080.1 CDS NA 3641883 3642482 + NA 1880 cds-WP_002211079.1 CDS COG1760 3643190 3644554 + [E] L-serine deaminase 1881 hpaC CDS COG1853 3644834 3645331 - [R] Conserved protein/domain typically associated with flavoprotein hpaB CDS COG2368 3645352 3646914 - [Q] Aromatic ring hydroxylase 1882 hpaX CDS COG0477 3646982 3648349 - [GEPR] Permeases of the major facilitator superfamily hpaI CDS COG3836 3648375 3649181 - [G] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase hpaH CDS COG3971 3649192 3649995 - [Q] 2-keto-4-pentenoate hydratase cds-WP_002211073.1 CDS COG3232 3649989 3650387 - [E] 5-carboxymethyl-2-hydroxymuconate isomerase hpaD CDS COG3384 3650412 3651269 - [S] Uncharacterized conserved protein cds-WP_002211071.1 CDS COG1012 3651388 3652785 - [C] NAD-dependent aldehyde dehydrogenases cds-WP_002214882.1 CDS COG0179 3652782 3653546 - [Q] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) cds-WP_002214880.1 CDS COG0179 3653543 3654175 - [Q] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 1883 hpaR CDS COG1846 3654559 3655026 + [K] Transcriptional regulators cds-WP_099156363.1 CDS NA 3655016 3655159 + NA 1884 cds-A1122_RS17170 CDS COG0861 3655128 3656583 - [P] Membrane protein TerC, possibly involved in 1885 manX CDS COG3444 3657293 3658267 + [G] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB cds-WP_002211068.1 CDS COG3715 3658359 3659156 + [G] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC cds-WP_002211067.1 CDS COG3716 3659172 3660050 + [G] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 1886 cds-WP_002211066.1 CDS COG4811 3660250 3660711 + [S] Predicted membrane protein 1887 mntP CDS COG1971 3661140 3661709 + [S] Predicted membrane protein 1888 cds-WP_002227970.1 CDS COG1629 3661870 3664146 - [P] Outer membrane receptor proteins, mostly Fe 1889 cds-WP_002211063.1 CDS COG2202 3664505 3666586 + [T] FOG: PAS/PAC domain 1890 cds-WP_002211062.1 CDS COG3557 3666808 3667086 + [J] Uncharacterized domain/protein associated with RNAses G 1891 rlmA CDS COG0500 3667308 3668147 - [QR] SAM-dependent methyltransferases 1892 pgeF CDS COG1496 3668542 3669297 + [S] Uncharacterized conserved protein 1893 cspE_2 CDS COG1278 3669388 3669597 - [K] Cold shock proteins cds-WP_002211058.1 CDS NA 3669640 3669756 - NA 1894 pagP CDS ROG4459 3670758 3671357 + NA 1895 cds-WP_002211055.1 CDS COG1113 3671662 3673035 - [E] Gamma-aminobutyrate permease and related permeases 1896 cds-WP_002211054.1 CDS NA 3673272 3673517 - NA 1897 cds-WP_002211053.1 CDS NA 3673626 3673925 - NA 1898 cds-WP_002216495.1 CDS ROG8135 3674188 3674463 - NA 1899 cds-WP_002430101.1 CDS NA 3674667 3674810 - NA 1900 cds-WP_002216493.1 CDS NA 3675046 3675279 + NA 1901 cds-WP_002211050.1 CDS NA 3675370 3675609 - NA 1902 cds-WP_002211048.1 CDS COG2207 3676165 3676551 + [K] AraC-type DNA-binding domain-containing proteins 1903 cds-WP_002211047.1 CDS NA 3676633 3676797 - NA 1904 cds-WP_002211045.1 CDS COG1132 3677453 3679171 + [V] ABC-type multidrug transport system, ATPase and 1905 cds-WP_002211044.1 CDS COG1718 3679274 3680125 + [TD] Serine/threonine protein kinase involved in cell 1906 cds-WP_002211043.1 CDS COG2350 3680362 3680646 + [S] Uncharacterized protein conserved in bacteria 1907 mtfA CDS COG3228 3681036 3681848 + [S] Uncharacterized protein conserved in bacteria 1908 rna-A1122_RS17310 tRNA NA 3682026 3682101 + NA 1909 cds-WP_002224323.1 CDS COG2984 3682244 3682501 - [R] ABC-type uncharacterized transport system, periplasmic component istB_36 CDS COG1484 3682517 3683299 - [L] DNA replication protein istA_36 CDS COG4584 3683296 3684318 - [L] Transposase and inactivated derivatives cds-WP_002216469.1 CDS COG1609 3684332 3685219 - [K] Transcriptional regulators 1910 cds-WP_002209743.1-14 CDS COG3328 3685694 3686902 - [L] Transposase and inactivated derivatives cds-WP_002210828.1 CDS COG1917 3686950 3687300 - [S] Uncharacterized conserved protein, contains double-stranded beta-helix 1911 kduI CDS COG3717 3687636 3688472 + [G] 5-keto 4-deoxyuronate isomerase kduD_2 CDS COG1028 3688564 3689325 + [IQR] Dehydrogenases with different specificities (related to 1912 cds-WP_002210831.1 CDS NA 3689661 3691328 + NA cds-WP_002210832.1 CDS COG1175 3691369 3692259 + [G] ABC-type sugar transport systems, permease components cds-WP_002210833.1 CDS COG0395 3692252 3693172 + [G] ABC-type sugar transport system, permease component cds-WP_002210834.1 CDS COG3839 3693186 3694313 + [G] ABC-type sugar transport systems, ATPase components cds-WP_002210835.1 CDS COG1653 3694329 3695621 + [G] ABC-type sugar transport system, periplasmic component 1913 cds-WP_002210836.1 CDS NA 3695919 3696629 + NA 1914 cds-WP_002210837.1 CDS COG1988 3697109 3697657 + [R] Predicted membrane-bound metal-dependent hydrolases 1915 cds-WP_002210838.1 CDS COG1823 3697861 3699252 + [R] Predicted Na+/dicarboxylate symporter 1916 cds-WP_002210839.1 CDS COG3023 3699467 3700318 - [V] Negative regulator of beta-lactamase expression 1917 kdgR CDS COG1414 3700703 3701494 - [K] Transcriptional regulator 1918 ogl CDS COG0823 3701681 3702847 - [U] Periplasmic component of the Tol biopolymer 1919 cds-WP_002210842.1 CDS NA 3703174 3704541 + NA 1920 cds-WP_002210843.1 CDS COG3121 3704595 3705398 - [NU] P pilus assembly protein, chaperone PapD cds-WP_002215120.1 CDS COG3539 3705395 3706558 - [NU] P pilus assembly protein, pilin FimA cds-WP_002210844.1 CDS COG3188 3706555 3709167 - [NU] P pilus assembly protein, porin PapC cds-WP_002215118.1 CDS COG3121 3709249 3710028 - [NU] P pilus assembly protein, chaperone PapD cds-WP_002210846.1 CDS COG3539 3710181 3710723 - [NU] P pilus assembly protein, pilin FimA 1921 htpX CDS COG0501 3711381 3712262 - [O] Zn-dependent protease with chaperone function 1922 prc CDS COG0793 3712736 3714808 - [M] Periplasmic protease proQ CDS COG3109 3714828 3715541 - [T] Activator of osmoprotectant transporter ProP cds-WP_002210850.1 CDS COG1956 3715637 3716134 - [T] GAF domain-containing protein 1923 yebS CDS COG2995 3716366 3717613 + [S] Uncharacterized paraquat-inducible protein A cds-WP_002216616.1 CDS COG3008 3717582 3720233 + [R] Paraquat-inducible protein B 1924 cds-WP_002210852.1 CDS COG5430 3720712 3721266 + [S] Uncharacterized secreted protein cds-WP_002216613.1 CDS COG5430 3721272 3721802 + [S] Uncharacterized secreted protein cds-WP_002216611.1 CDS COG5430 3721823 3722380 + [S] Uncharacterized secreted protein cds-WP_002210856.1 CDS COG3121 3722411 3723163 + [NU] P pilus assembly protein, chaperone PapD cds-WP_002210857.1 CDS COG3188 3723351 3725798 + [NU] P pilus assembly protein, porin PapC cds-WP_002210858.1 CDS COG5430 3726004 3726993 + [S] Uncharacterized secreted protein 1925 cds-WP_002210859.1 CDS NA 3727201 3727440 + NA 1926 cds-WP_002215943.1 CDS COG4405 3727550 3727939 - [S] Uncharacterized protein conserved in bacteria 1927 yniD CDS NA 3728178 3728264 + NA 1928 istA_37 CDS COG4584 3728346 3729368 + [L] Transposase and inactivated derivatives istB_37 CDS COG1484 3729365 3730147 + [L] DNA replication protein 1929 cds-WP_002210861.1 CDS NA 3730250 3730423 - NA 1930 cds-WP_002210862.1 CDS NA 3730682 3730915 - NA 1931 cds-WP_002210864.1 CDS ROG2055 3731070 3732326 - NA 1932 cds-WP_002210865.1 CDS NA 3732719 3732967 - NA 1933 cds-WP_002210867.1 CDS NA 3733546 3733740 + NA 1934 alr_2 CDS COG0787 3734142 3735371 + [M] Alanine racemase 1935 cds-WP_002210869.1 CDS NA 3735990 3736943 - NA 1936 cds-WP_002229223.1 CDS COG5295 3737043 3737561 - [UW] Autotransporter adhesin cds-WP_002377800.1 CDS COG5295 3737464 3739557 - [UW] Autotransporter adhesin 1937 cds-WP_002210870.1 CDS COG3023 3740031 3740795 - [V] Negative regulator of beta-lactamase expression 1938 cheZ CDS COG3143 3741360 3742004 - [NT] Chemotaxis protein cheY CDS COG0784 3742014 3742403 - [T] FOG: CheY-like receiver cds-WP_002210874.1 CDS COG2201 3742504 3743553 - [NT] Chemotaxis response regulator containing a CheY-like cheR CDS COG1352 3743553 3744425 - [NT] Methylase of chemotaxis methyl-accepting proteins cds-A1122_RS17595 CDS COG0840 3744598 3746208 - [NT] Methyl-accepting chemotaxis protein cds-WP_002210876.1 CDS COG0840 3746392 3748065 - [NT] Methyl-accepting chemotaxis protein 1939 cds-WP_002214064.1 CDS NA 3748306 3749007 - NA 1940 cds-WP_002210878.1 CDS COG5373 3749076 3751952 - [S] Predicted membrane protein 1941 yapJ CDS COG3468 3752480 3756286 - [MU] Type V secretory pathway, adhesin AidA 1942 cds-WP_002210881.1 CDS COG2964 3756761 3757426 - [S] Uncharacterized protein conserved in bacteria 1943 cds-WP_002210882.1 CDS ROG6879 3757616 3758602 + NA cds-WP_002210883.1 CDS COG0251 3758599 3758976 + [J] Putative translation initiation inhibitor, yjgF family cds-WP_002210884.1 CDS ROG0753 3758989 3760224 + NA 1944 cheW CDS COG0835 3760516 3761013 - [NT] Chemotaxis signal transduction protein cheA CDS COG0643 3761176 3763341 - [NT] Chemotaxis protein histidine kinase and related motB CDS COG1360 3763358 3764641 - [N] Flagellar motor protein motA_2 CDS COG1291 3764638 3765525 - [N] Flagellar motor component 1945 flhC CDS ROG0388 3765730 3766311 - NA flhD CDS ROG0481 3766315 3766666 - NA 1946 mgtA CDS COG0474 3767854 3770553 - [P] Cation transport ATPase cds-WP_002210891.1 CDS COG1285 3770954 3771652 - [S] Uncharacterized membrane protein 1947 cds-A1122_RS17685 CDS COG0840 3772778 3774512 + [NT] Methyl-accepting chemotaxis protein 1948 dsrB CDS NA 3774695 3774886 - NA 1949 cspE_3 CDS COG1278 3775101 3775313 - [K] Cold shock proteins 1950 cds-WP_002214048.1 CDS COG3250 3775854 3779036 + [G] Beta-galactosidase/beta-glucuronidase 1951 cds-WP_002210897.1 CDS COG0604 3779443 3780453 + [CR] NADPH:quinone reductase and related Zn-dependent oxidoreductases 1952 cds-WP_002214045.1 CDS NA 3780736 3781269 + NA 1953 cds-WP_002210900.1 CDS COG1522 3781745 3782194 + [K] Transcriptional regulators 1954 cds-WP_002210901.1 CDS ROG2352 3782286 3783185 + NA 1955 ydfZ CDS COG3133 3783488 3783691 + [M] Outer membrane lipoprotein 1956 cds-WP_002210903.1 CDS ROG1885 3783993 3785318 - NA 1957 cds-WP_002210904.1 CDS NA 3785619 3785792 - NA cds-WP_002227977.1 CDS COG1733 3785850 3786233 - [K] Predicted transcriptional regulators 1958 cds-WP_002210906.1 CDS COG0702 3786393 3787250 + [MG] Predicted nucleoside-diphosphate-sugar epimerases 1959 cds-WP_002210907.1 CDS COG0840 3788170 3789750 + [NT] Methyl-accepting chemotaxis protein 1960 cds-WP_002210908.1 CDS NA 3789870 3790130 + NA 1961 cds-WP_002210909.1 CDS COG1609 3790406 3791449 + [K] Transcriptional regulators 1962 icd CDS COG0538 3791595 3792848 - [C] Isocitrate dehydrogenases 1963 rluE CDS COG1187 3792979 3793605 + [J] 16S rRNA uridine-516 pseudouridylate synthase and cds-WP_002210912.1 CDS COG1051 3793598 3794044 + [F] ADP-ribose pyrophosphatase 1964 mnmA CDS COG0482 3794231 3795346 + [J] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop hflD CDS COG2915 3795404 3796030 + [R] Uncharacterized protein involved in purine metabolism purB CDS COG0015 3796091 3797461 + [F] Adenylosuccinate lyase 1965 cds-WP_002210916.1 CDS ROG0350 3797649 3798272 + NA 1966 phoP CDS COG0745 3798483 3799154 + [TK] Response regulators consisting of a CheY-like phoQ CDS COG2205 3799160 3800614 + [T] Osmosensitive K+ channel histidine kinase 1967 cds-WP_002210919.1 CDS COG2850 3800698 3801819 + [S] Uncharacterized conserved protein 1968 pepT CDS COG2195 3802052 3803287 - [E] Di- and tripeptidases 1969 cobB CDS COG0846 3803617 3804453 - [K] NAD-dependent protein deacetylases, SIR2 family nagK CDS COG1940 3804502 3805417 - [KG] Transcriptional regulator/sugar kinase lolE CDS COG4591 3805436 3806683 - [M] ABC-type transport system, involved in lipoprotein lolD CDS COG1136 3806683 3807387 - [V] ABC-type antimicrobial peptide transport system, ATPase lolC CDS COG4591 3807380 3808582 - [M] ABC-type transport system, involved in lipoprotein 1970 mfd CDS COG1197 3808852 3812298 + [LK] Transcription-repair coupling factor (superfamily II helicase) 1971 cds-WP_002210925.1 CDS COG3134 3812537 3813076 - [S] Predicted outer membrane lipoprotein 1972 istA_38 CDS COG4584 3813181 3814203 + [L] Transposase and inactivated derivatives istB_38 CDS COG1484 3814200 3814982 + [L] DNA replication protein 1973 cds-WP_002209743.1-15 CDS COG3328 3815366 3816574 - [L] Transposase and inactivated derivatives 1974 cds-WP_002213101.1 CDS NA 3816670 3817083 - NA cds-WP_223871956.1 CDS NA 3817091 3817720 - NA 1975 cds-WP_002213097.1 CDS COG1252 3818198 3819502 - [C] NADH dehydrogenase, FAD-containing subunit 1976 ycfP CDS COG3150 3819877 3820419 - [R] Predicted esterase 1977 nagZ CDS COG1472 3820547 3821566 - [G] Beta-glucosidase-related glycosidases 1978 thiK CDS COG0510 3821649 3822515 - [M] Predicted choline kinase involved in LPS lpoB CDS COG3417 3822496 3823071 - [R] Collagen-binding surface adhesin SpaP (antigen I/II cds-WP_002213088.1 CDS COG5633 3823112 3823501 - [R] Predicted periplasmic lipoprotein hinT CDS COG0537 3823536 3823889 - [FGR] Diadenosine tetraphosphate (Ap4A) hydrolase and other 1979 cds-WP_002215853.1 CDS COG0169 3824063 3824881 - [E] Shikimate 5-dehydrogenase 1980 tnpA_53 CDS COG1943 3825324 3825782 - [L] Transposase and inactivated derivatives 1981 ptsG CDS COG1263 3825972 3827405 - [G] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 1982 cds-WP_002213084.1 CDS COG0084 3827711 3828520 - [L] Mg-dependent DNase holB CDS COG2812 3828535 3829557 - [L] DNA polymerase III, gamma/tau subunits tmk CDS COG0125 3829557 3830195 - [F] Thymidylate kinase mltG CDS COG1559 3830185 3831210 - [R] Predicted periplasmic solute-binding protein 1983 cds-A1122_RS24445 CDS NA 3831395 3831466 + NA 1984 pabC CDS NA 3831499 3832305 - NA 1985 tnpA_54 CDS COG1943 3832721 3833179 - [L] Transposase and inactivated derivatives 1986 fabF CDS COG0304 3833379 3834620 - [IQ] 3-oxoacyl-(acyl-carrier-protein) synthase acpP CDS COG0236 3834715 3834951 - [IQ] Acyl carrier protein fabG CDS COG1028 3835105 3835839 - [IQR] Dehydrogenases with different specificities (related to fabD CDS COG0331 3835853 3836782 - [I] (acyl-carrier-protein) S-malonyltransferase cds-WP_002210933.1 CDS COG0332 3836820 3837770 - [I] 3-oxoacyl-[acyl-carrier-protein] synthase III plsX CDS COG0416 3837777 3838811 - [I] Fatty acid/phospholipid biosynthesis enzyme rpmF CDS COG0333 3838845 3839012 - [J] Ribosomal protein L32 yceD CDS COG1399 3839025 3839549 - [R] Predicted metal-binding, possibly nucleic acid-binding protein 1987 cds-WP_002210928.1 CDS COG0424 3839691 3840287 + [D] Nucleotide-binding protein implicated in inhibition of 1988 tnpA_55 CDS COG1943 3840442 3840900 - [L] Transposase and inactivated derivatives 1989 rluC CDS COG0564 3841120 3842082 - [J] Pseudouridylate synthases, 23S RNA-specific 1990 rne CDS COG1530 3842657 3846322 + [J] Ribonucleases G and E 1991 cds-WP_002209743.1-16 CDS COG3328 3846418 3847626 + [L] Transposase and inactivated derivatives 1992 cds-A1122_RS22905 CDS COG2801 3847693 3847845 - [L] Transposase and inactivated derivatives cds-WP_002213107.1 CDS COG1359 3847903 3848190 - [S] Uncharacterized conserved protein 1993 pyrC CDS COG0418 3848425 3849471 + [F] Dihydroorotase 1994 dinI CDS NA 3849784 3850029 + NA 1995 bssS CDS NA 3850535 3850831 + NA 1996 cds-WP_002209743.1-17 CDS COG3328 3850794 3852002 - [L] Transposase and inactivated derivatives 1997 cds-WP_042468818.1 CDS COG0477 3852027 3853304 + [GEPR] Permeases of the major facilitator superfamily 1998 cds-WP_002213113.1 CDS COG3345 3853382 3855508 + [G] Alpha-galactosidase cds-WP_002216586.1 CDS NA 3855525 3855689 + NA 1999 cds-WP_002213120.1 CDS COG2977 3855895 3856635 - [Q] Phosphopantetheinyl transferase component of siderophore synthetase 2000 cds-WP_002213121.1 CDS COG1638 3857158 3858150 + [G] TRAP-type C4-dicarboxylate transport system, periplasmic component cds-WP_002213122.1 CDS COG3090 3858274 3858780 + [G] TRAP-type C4-dicarboxylate transport system, small permease cds-WP_002213124.1 CDS COG1593 3858800 3860092 + [G] TRAP-type C4-dicarboxylate transport system, large permease 2001 cds-WP_002213125.1 CDS COG2197 3860350 3860979 + [TK] Response regulator containing a CheY-like receiver 2002 rna-A1122_RS18100 tRNA NA 3861425 3861500 + NA 2003 cds-WP_002211926.1 CDS COG3122 3861846 3862385 - [S] Uncharacterized protein conserved in bacteria 2004 cds-WP_002217591.1 CDS NA 3862475 3863170 - NA 2005 cds-WP_002211923.1 CDS COG0726 3863747 3864628 + [G] Predicted xylanase/chitin deacetylase cds-WP_002211922.1 CDS COG0477 3864664 3866004 + [GEPR] Permeases of the major facilitator superfamily 2006 cds-WP_002224723.1 CDS COG0534 3866032 3867462 - [V] Na+-driven multidrug efflux pump 2007 argG CDS COG0137 3867756 3869123 + [E] Argininosuccinate synthase 2008 lldD CDS COG1304 3869328 3870473 - [C] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy 2009 cds-WP_002211917.1 CDS COG4948 3870770 3872047 - [MR] L-alanine-DL-glutamate epimerase and related enzymes of cds-WP_002211916.1 CDS COG0179 3872079 3872921 - [Q] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) cds-WP_002216393.1 CDS COG1028 3872969 3873709 - [IQR] Dehydrogenases with different specificities (related to 2010 cds-WP_002211912.1 CDS COG3011 3874137 3874559 + [S] Uncharacterized protein conserved in bacteria 2011 cds-WP_002211911.1 CDS NA 3874568 3875872 - NA 2012 cds-WP_002216388.1 CDS ROG3089 3876897 3880049 + NA 2013 cds-WP_002209743.1-18 CDS COG3328 3880012 3881220 - [L] Transposase and inactivated derivatives 2014 tmaR CDS COG2926 3881591 3881908 - [S] Uncharacterized protein conserved in bacteria 2015 cds-WP_002211905.1 CDS COG3320 3882342 3883451 - [Q] Putative dehydrogenase domain of multifunctional non-ribosomal 2016 sbcB CDS COG2925 3883744 3885174 + [L] Exonuclease I 2017 cds-A1122_RS23430 CDS NA 3885667 3885839 + NA 2018 cds-WP_002211902.1 CDS COG0531 3885911 3887302 - [E] Amino acid transporters cds-WP_002216313.1 CDS NA 3887292 3887507 - NA 2019 cds-WP_002216312.1 CDS COG0371 3887762 3888853 - [C] Glycerol dehydrogenase and related enzymes 2020 cds-WP_002216311.1 CDS COG1129 3889139 3890032 + [G] ABC-type sugar transport system, ATPase component cds-WP_002216310.1 CDS COG1129 3889990 3890679 + [G] ABC-type sugar transport system, ATPase component cds-WP_002211900.1 CDS COG1172 3890676 3891671 + [G] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 2021 cds-WP_157131899.1 CDS ROG6117 3892060 3892350 + NA 2022 cds-WP_002211898.1 CDS COG0451 3892505 3893332 - [MG] Nucleoside-diphosphate-sugar epimerases 2023 hisL CDS NA 3893708 3893755 + NA 2024 hisG CDS COG0040 3894038 3894937 + [E] ATP phosphoribosyltransferase hisD CDS COG0141 3894941 3896272 + [E] Histidinol dehydrogenase hisC CDS COG0079 3896275 3897423 + [E] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase hisB CDS COG0131 3897420 3898487 + [E] Imidazoleglycerol-phosphate dehydratase hisH CDS COG0118 3898487 3899077 + [E] Glutamine amidotransferase hisA CDS COG0106 3899083 3899820 + [E] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase hisF CDS COG0107 3899802 3900578 + [E] Imidazoleglycerol-phosphate synthase hisIE CDS COG0139 3900572 3901186 + [E] Phosphoribosyl-AMP cyclohydrolase 2025 gndA CDS COG0362 3901386 3902795 - [G] 6-phosphogluconate dehydrogenase 2026 galU CDS COG1210 3903181 3904074 - [M] UDP-glucose pyrophosphorylase galU_2 CDS COG1210 3904158 3905048 - [M] UDP-glucose pyrophosphorylase 2027 cds-WP_002211884.1 CDS COG4264 3905994 3907808 + [Q] Siderophore synthetase component 2028 cds-WP_002211883.1 CDS COG4773 3908021 3910282 + [P] Outer membrane receptor for ferric coprogen cds-WP_002211882.1 CDS COG0614 3910372 3911451 + [P] ABC-type Fe3+-hydroxamate transport system, periplasmic component cds-WP_002211881.1 CDS COG0609 3911448 3912488 + [P] ABC-type Fe3+-siderophore transport system, permease component cds-WP_002211880.1 CDS COG4779 3912475 3913515 + [P] ABC-type enterobactin transport system, permease component cds-WP_002211879.1 CDS COG1120 3913542 3914360 + [PH] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 2029 cds-WP_002215001.1 CDS COG4264 3914469 3916313 - [Q] Siderophore synthetase component cds-WP_002214999.1 CDS NA 3916310 3916888 - NA cds-WP_002211878.1 CDS COG3486 3916888 3918186 - [Q] Lysine/ornithine N-monooxygenase cds-WP_002211877.1 CDS COG0076 3918221 3919768 - [E] Glutamate decarboxylase and related PLP-dependent proteins 2030 fhuF CDS COG4114 3919920 3920699 - [R] Uncharacterized Fe-S protein 2031 cds-WP_002211875.1 CDS COG0861 3921141 3922727 + [P] Membrane protein TerC, possibly involved in 2032 asmA CDS COG2982 3922872 3924728 - [M] Uncharacterized protein involved in outer membrane 2033 dcd CDS COG0717 3924915 3925496 - [F] Deoxycytidine deaminase udk CDS COG0572 3925601 3926242 - [F] Uridine kinase 2034 apbC CDS COG0489 3926487 3927599 - [D] ATPases involved in chromosome partitioning 2035 metG CDS COG0143 3927864 3929891 + [J] Methionyl-tRNA synthetase 2036 tnpA_56 CDS COG1943 3930055 3930513 - [L] Transposase and inactivated derivatives 2037 istA_39 CDS COG4584 3930624 3931646 + [L] Transposase and inactivated derivatives istB_39 CDS COG1484 3931643 3932425 + [L] DNA replication protein 2038 cds-WP_002228565.1 CDS NA 3932690 3933352 - NA 2039 cds-WP_002211975.1 CDS COG1879 3934050 3935126 + [G] ABC-type sugar transport system, periplasmic component cds-WP_002211974.1 CDS COG5276 3935144 3936397 + [S] Uncharacterized conserved protein 2040 cds-WP_002211973.1 CDS NA 3936730 3937911 + NA 2041 cds-WP_002211971.1 CDS COG1380 3938153 3938560 + [R] Putative effector of murein hydrolase LrgA cds-WP_002211970.1 CDS COG1346 3938557 3939252 + [M] Putative effector of murein hydrolase 2042 cdd CDS COG0295 3939578 3940462 + [F] Cytidine deaminase 2043 cds-WP_002211968.1 CDS COG0281 3940818 3942515 + [C] Malic enzyme 2044 sanA CDS COG2949 3942796 3943533 + [S] Uncharacterized membrane protein 2045 mglC CDS COG4211 3943978 3944988 - [G] ABC-type glucose/galactose transport system, permease component mglA CDS COG1129 3945009 3946529 - [G] ABC-type sugar transport system, ATPase component mglB CDS COG1879 3946759 3947766 - [G] ABC-type sugar transport system, periplasmic component 2046 yeiB CDS COG2311 3948514 3949680 - [S] Predicted membrane protein 2047 folE CDS COG0302 3949735 3950397 - [H] GTP cyclohydrolase I 2048 cds-WP_002211959.1 CDS NA 3950581 3951732 - NA 2049 cds-WP_002211958.1 CDS COG0583 3951868 3952737 + [K] Transcriptional regulator 2050 cds-WP_002211957.1 CDS COG1062 3953011 3954150 + [C] Zn-dependent alcohol dehydrogenases, class III fghA CDS COG0627 3954171 3955013 + [R] Predicted esterase 2051 darA-c CDS NA 3955270 3955482 + NA 2052 darB CDS NA 3955566 3957926 + NA darC CDS ROG0722 3957928 3959190 + NA darD CDS COG1136 3959192 3959860 + [V] ABC-type antimicrobial peptide transport system, ATPase darE CDS COG0641 3959870 3961180 + [R] Arylsulfatase regulator (Fe-S oxidoreductase) 2053 moeA CDS COG0303 3961715 3962989 + [H] Molybdopterin biosynthesis enzyme moeB CDS COG0476 3962991 3963761 + [H] Dinucleotide-utilizing enzymes involved in molybdopterin and 2054 cds-WP_002209743.1-19 CDS COG3328 3963897 3965105 + [L] Transposase and inactivated derivatives 2055 cds-WP_002211947.1 CDS ROG3967 3965149 3965802 - NA 2056 cds-WP_002227996.1 CDS COG0488 3966030 3967625 - [R] ATPase components of ABC transporters with 2057 cds-WP_002211945.1 CDS NA 3968308 3968931 + NA 2058 cds-WP_002211944.1 CDS COG3515 3969143 3970510 - [S] Uncharacterized protein conserved in bacteria tssE_2 CDS COG3518 3970535 3970987 - [S] Uncharacterized protein conserved in bacteria tssJ_4 CDS COG3521 3970987 3971568 - [S] Uncharacterized protein conserved in bacteria tssG_4 CDS COG3520 3971543 3972628 - [S] Uncharacterized protein conserved in bacteria tssF_4 CDS COG3519 3972592 3974355 - [S] Uncharacterized protein conserved in bacteria 2059 cds-WP_002211939.1 CDS NA 3974576 3975031 - NA cds-WP_002211938.1 CDS COG5529 3975046 3976104 - [R] Pyocin large subunit tssA_2 CDS COG3515 3976122 3977723 - [S] Uncharacterized protein conserved in bacteria cds-WP_002211936.1 CDS COG3523 3977767 3981189 - [S] Uncharacterized protein conserved in bacteria cds-WP_002211935.1 CDS NA 3981186 3982418 - NA 2060 cds-A1122_RS22910 CDS COG3335 3983248 3984118 + [L] Transposase and inactivated derivatives 2061 cds-WP_002214564.1 CDS NA 3984583 3985053 - NA 2062 cds-WP_002211932.1 CDS ROG3008 3985226 3987409 - NA cds-WP_002211931.1 CDS COG4253 3987425 3987685 - [S] Uncharacterized protein conserved in bacteria 2063 cds-WP_002211930.1 CDS NA 3987839 3988612 - NA cds-WP_002211929.1 CDS COG3179 3988609 3990909 - [R] Predicted chitinase cds-WP_002211928.1 CDS COG3501 3990925 3993273 - [S] Uncharacterized protein conserved in bacteria tssH_5 CDS COG0542 3993276 3995918 - [O] ATPases with chaperone activity, ATP-binding subunit 2064 cds-WP_002210014.1-2 CDS COG3157 3996306 3996797 - [S] Hemolysin-coregulated protein (uncharacterized) cds-WP_002214568.1 CDS COG2885 3996801 3998537 - [M] Outer membrane protein and related peptidoglycan-associated tssL_3 CDS COG3455 3998537 3999223 - [S] Uncharacterized protein conserved in bacteria tssK_5 CDS COG3522 3999220 4000572 - [S] Uncharacterized protein conserved in bacteria tssC_5 CDS COG3517 4000584 4002134 - [S] Uncharacterized protein conserved in bacteria tssB_5 CDS COG3516 4002177 4002677 - [S] Uncharacterized protein conserved in bacteria 2065 cds-WP_002213016.1 CDS COG0331 4003666 4004514 - [I] (acyl-carrier-protein) S-malonyltransferase cds-WP_002213017.1 CDS COG0236 4004613 4004861 - [IQ] Acyl carrier protein cds-WP_002228570.1 CDS ROG1204 4004899 4005339 - NA 2066 cds-WP_002213024.1 CDS COG1028 4005426 4006214 - [IQR] Dehydrogenases with different specificities (related to cds-WP_002213025.1 CDS COG1024 4006217 4006969 - [I] Enoyl-CoA hydratase/carnithine racemase cds-WP_002213026.1 CDS COG0447 4006971 4007690 - [H] Dihydroxynaphthoic acid synthase cds-WP_002213028.1 CDS COG3425 4007683 4008921 - [I] 3-hydroxy-3-methylglutaryl CoA synthase cds-WP_002213030.1 CDS COG1028 4008937 4009674 - [IQR] Dehydrogenases with different specificities (related to cds-WP_002213032.1 CDS COG0304 4009676 4010959 - [IQ] 3-oxoacyl-(acyl-carrier-protein) synthase cds-WP_002213034.1 CDS COG0764 4010949 4011473 - [I] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 2067 cds-WP_002213036.1 CDS COG0151 4011737 4011955 - [F] Phosphoribosylamine-glycine ligase 2068 cds-WP_002213038.1 CDS COG1028 4012598 4013344 + [IQR] Dehydrogenases with different specificities (related to 2069 cds-WP_002213039.1 CDS ROG2341 4013498 4015915 + NA 2070 cnfy CDS NA 4016046 4018156 - NA 2071 cds-A1122_RS23435 CDS COG3316 4018528 4019052 - [L] Transposase and inactivated derivatives 2072 rna-A1122_RS18750 tRNA NA 4019233 4019320 - NA 2073 tusE CDS COG2920 4019561 4019890 + [P] Dissimilatory sulfite reductase (desulfoviridin), gamma subunit 2074 yccX CDS COG1254 4019942 4020220 - [C] Acylphosphatases 2075 rlmI CDS COG1092 4020314 4021504 + [R] Predicted SAM-dependent methyltransferases hspQ CDS COG3785 4021565 4021882 + [S] Uncharacterized conserved protein 2076 cds-WP_002213056.1 CDS COG1832 4021991 4022407 - [R] Predicted CoA-binding protein 2077 cds-WP_002213058.1 CDS COG3110 4022723 4023403 + [S] Uncharacterized protein conserved in bacteria 2078 cds-WP_002213060.1 CDS COG1803 4023582 4024046 + [G] Methylglyoxal synthase 2079 helD CDS COG1074 4024107 4026092 - [L] ATP-dependent exoDNAse (exonuclease V) beta subunit 2080 cds-WP_002213062.1 CDS COG3304 4026286 4026732 + [S] Predicted membrane protein yccS CDS COG1289 4026762 4028900 + [S] Predicted membrane protein 2081 cds-WP_002213064.1 CDS COG3070 4029002 4029637 - [K] Regulator of competence-specific genes 2082 sulA CDS COG5404 4029866 4030372 + [D] SOS-response cell division inhibitor, blocks FtsZ 2083 ompA CDS COG2885 4030730 4031791 + [M] Outer membrane protein and related peptidoglycan-associated 2084 tnpA_57 CDS COG1943 4031981 4032439 + [L] Transposase and inactivated derivatives 2085 matP CDS COG3120 4032608 4033063 - [S] Uncharacterized protein conserved in bacteria 2086 cds-WP_002224683.1 CDS COG1067 4033274 4035025 + [O] Predicted ATP-dependent protease fabA CDS COG0764 4035094 4035612 + [I] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 2087 cds-WP_002211286.1 CDS NA 4035878 4036066 - NA 2088 cds-A1122_RS18850 CDS COG0304 4036312 4036608 + [IQ] 3-oxoacyl-(acyl-carrier-protein) synthase 2089 istA_40 CDS COG4584 4036700 4037722 + [L] Transposase and inactivated derivatives istB_40 CDS COG1484 4037719 4038501 + [L] DNA replication protein 2090 cds-A1122_RS18865 CDS COG0834 4038568 4039029 - [ET] ABC-type amino acid transport/signal transduction systems, 2091 cds-WP_002228004.1 CDS NA 4039277 4039507 + NA 2092 cds-WP_002211378.1 CDS COG0330 4039848 4040774 + [O] Membrane protease subunits, stomatin/prohibitin homologs 2093 cds-WP_002211377.1 CDS COG0614 4041186 4042277 + [P] ABC-type Fe3+-hydroxamate transport system, periplasmic component cds-WP_002231265.1 CDS COG4779 4042277 4042513 + [P] ABC-type enterobactin transport system, permease component cds-WP_002231264.1 CDS COG0609 4042510 4042896 + [P] ABC-type Fe3+-siderophore transport system, permease component cds-WP_002211376.1 CDS COG0609 4042857 4043333 + [P] ABC-type Fe3+-siderophore transport system, permease component cds-WP_002211375.1 CDS COG1121 4043330 4044115 + [P] ABC-type Mn/Zn transport systems, ATPase component cds-WP_002211374.1 CDS ROG8234 4044103 4044900 + NA cds-WP_002211373.1 CDS COG4408 4044893 4046263 + [S] Uncharacterized protein conserved in bacteria cds-WP_002211372.1 CDS COG0697 4046260 4047105 + [GER] Permeases of the drug/metabolite transporter (DMT) 2094 cds-WP_002211371.1 CDS NA 4047130 4047279 - NA artM CDS COG4160 4047295 4047963 - [E] ABC-type arginine/histidine transport system, permease component artQ CDS COG4215 4047963 4048679 - [E] ABC-type arginine transport system, permease component artJ CDS COG0834 4048691 4049422 - [ET] ABC-type amino acid transport/signal transduction systems, artP CDS COG4161 4049443 4050171 - [E] ABC-type arginine transport system, ATPase component 2095 cds-WP_002211366.1 CDS COG1605 4050466 4051026 - [E] Chorismate mutase 2096 cds-WP_002211365.1 CDS NA 4051196 4051771 - NA 2097 cds-WP_002211364.1 CDS COG0451 4051868 4052875 - [MG] Nucleoside-diphosphate-sugar epimerases cds-WP_002211363.1 CDS COG0702 4052975 4054465 - [MG] Predicted nucleoside-diphosphate-sugar epimerases ltaE CDS COG2008 4054462 4055481 - [E] Threonine aldolase 2098 poxB CDS COG0028 4055830 4057551 - [EH] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate 2099 hcr CDS COG1018 4057695 4058717 - [C] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 hcp CDS COG1151 4058831 4060483 - [C] 6Fe-6S prismane cluster-containing protein 2100 cds-WP_002211358.1 CDS COG2431 4060685 4061581 - [S] Predicted membrane protein 2101 cds-WP_002211356.1 CDS COG3593 4061934 4063601 + [L] Predicted ATP-dependent endonuclease of the OLD 2102 cds-WP_002211355.1 CDS COG2990 4063738 4064685 - [S] Uncharacterized protein conserved in bacteria 2103 macA CDS COG0845 4064922 4066034 + [M] Membrane-fusion protein macB CDS COG0577 4066034 4067983 + [V] ABC-type antimicrobial peptide transport system, permease 2104 cspD CDS COG1278 4068264 4068527 - [K] Cold shock proteins 2105 clpS CDS COG2127 4068888 4069208 + [S] Uncharacterized conserved protein clpA CDS COG0542 4069234 4071510 + [O] ATPases with chaperone activity, ATP-binding subunit 2106 tnpA_58 CDS COG1943 4071803 4072261 + [L] Transposase and inactivated derivatives 2107 infA CDS COG0361 4072633 4072851 - [J] Translation initiation factor 1 (IF-1) aat CDS COG2360 4073017 4073727 - [O] Leu/Phe-tRNA-protein transferase 2108 cydC CDS COG4987 4073946 4075670 - [CO] ABC-type transport system involved in cytochrome cydD CDS COG4988 4075673 4077439 - [CO] ABC-type transport system involved in cytochrome 2109 trxB CDS COG0492 4077898 4078860 - [O] Thioredoxin reductase 2110 lrp CDS COG1522 4079627 4080121 + [K] Transcriptional regulators 2111 cds-WP_002211339.1 CDS COG1674 4080244 4084161 + [D] DNA segregation ATPase FtsK/SpoIIIE and related lolA CDS COG2834 4084354 4084962 + [M] Outer membrane lipoprotein-sorting protein cds-WP_002228009.1 CDS COG2256 4084973 4086316 + [L] ATPase related to the helicase subunit serS CDS COG0172 4086558 4087850 + [J] Seryl-tRNA synthetase 2112 cds-WP_002211335.1 CDS NA 4088113 4089261 + NA 2113 pflA CDS COG1180 4089415 4090149 - [O] Pyruvate-formate lyase-activating enzyme 2114 cds-WP_002211333.1 CDS COG3306 4091136 4091810 + [M] Glycosyltransferase involved in LPS biosynthesis 2115 pflB CDS COG1882 4091928 4094210 - [C] Pyruvate-formate lyase focA CDS COG2116 4094266 4095123 - [P] Formate/nitrite family of transporters 2116 ycaO CDS COG1944 4095820 4097586 - [S] Uncharacterized conserved protein 2117 ansB CDS COG0252 4097735 4098772 + [EJ] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 2118 cds-WP_002211328.1 CDS COG5295 4099041 4100135 + [UW] Autotransporter adhesin cds-WP_002211327.1 CDS COG5295 4100156 4102003 + [UW] Autotransporter adhesin 2119 serC CDS COG1932 4102370 4103455 + [HE] Phosphoserine aminotransferase aroA CDS COG0128 4103618 4104904 + [E] 5-enolpyruvylshikimate-3-phosphate synthase cmk CDS COG0283 4105217 4105909 + [F] Cytidylate kinase rpsA CDS COG0539 4106083 4107756 + [J] Ribosomal protein S1 ihfB CDS COG0776 4107817 4108101 + [L] Bacterial nucleoid DNA-binding protein 2120 cds-WP_002211321.1 CDS COG0658 4108648 4110939 + [R] Predicted membrane metal-binding protein msbA CDS COG1132 4110975 4112723 + [V] ABC-type multidrug transport system, ATPase and lpxK CDS COG1663 4112720 4113706 + [M] Tetraacyldisaccharide-1-P 4'-kinase 2121 cds-WP_002216263.1 CDS COG5383 4113714 4115150 - [S] Uncharacterized protein conserved in bacteria 2122 cds-WP_002211317.1 CDS COG1278 4115869 4116078 + [K] Cold shock proteins 2123 cds-WP_002211315.1 CDS COG2835 4116626 4116808 + [S] Uncharacterized conserved protein kdsB CDS COG1212 4116805 4117557 + [M] CMP-2-keto-3-deoxyoctulosonic acid synthetase 2124 cds-WP_002211313.1 CDS NA 4117920 4118813 + NA 2125 cmoM CDS COG0500 4119586 4120371 + [QR] SAM-dependent methyltransferases mukF CDS COG3006 4120368 4121690 + [D] Uncharacterized protein involved in chromosome partitioning mukE CDS COG3095 4121671 4122399 + [D] Uncharacterized protein involved in chromosome partitioning mukB CDS COG3096 4122396 4126853 + [D] Uncharacterized protein involved in chromosome partitioning 2126 tnpA_59 CDS COG1943 4127069 4127527 + [L] Transposase and inactivated derivatives 2127 ldtD CDS COG2989 4127811 4129667 + [S] Uncharacterized protein conserved in bacteria 2128 cds-WP_002211305.1 CDS COG3108 4129891 4130439 + [S] Uncharacterized protein conserved in bacteria cds-WP_002211304.1 CDS COG0491 4130500 4131147 + [R] Zn-dependent hydrolases, including glyoxylases 2129 cds-A1122_RS24455 CDS NA 4131349 4131417 - NA 2130 cds-WP_002211303.1 CDS COG1448 4131571 4132761 - [E] Aspartate/tyrosine/aromatic aminotransferase 2131 ompF CDS COG3203 4133018 4134097 - [M] Outer membrane protein (porin) 2132 asnS CDS COG0017 4134398 4135798 - [J] Aspartyl/asparaginyl-tRNA synthetases 2133 pncB CDS COG1488 4136297 4137502 - [H] Nicotinic acid phosphoribosyltransferase 2134 pepN CDS COG0308 4138218 4140833 + [E] Aminopeptidase N 2135 pyrD CDS COG0167 4141460 4142470 + [F] Dihydroorotate dehydrogenase 2136 cds-WP_002211295.1 CDS ROG3478 4142653 4143204 + NA 2137 cds-WP_002211294.1 CDS COG3217 4143230 4144342 - [R] Uncharacterized Fe-S protein 2138 rlmKL CDS COG0116 4144442 4146562 + [L] Predicted N6-adenine-specific DNA methylase cds-WP_002211292.1 CDS COG0488 4146568 4148481 + [R] ATPase components of ABC transporters with 2139 pqiA CDS COG2995 4148610 4149896 + [S] Uncharacterized paraquat-inducible protein A pqiB CDS COG3008 4149883 4151535 + [R] Paraquat-inducible protein B pqiC CDS COG3009 4151532 4152110 + [S] Uncharacterized protein conserved in bacteria 2140 rmf CDS COG3130 4152380 4152547 + [J] Ribosome modulation factor 2141 tnpA_60 CDS COG1943 4152745 4153203 + [L] Transposase and inactivated derivatives 2142 cds-A1122_RS19330 CDS COG0304 4153320 4154294 - [IQ] 3-oxoacyl-(acyl-carrier-protein) synthase 2143 istB_41 CDS COG1484 4154364 4155146 - [L] DNA replication protein istA_41 CDS COG4584 4155143 4156165 - [L] Transposase and inactivated derivatives cds-WP_002210704.1 CDS COG0582 4156179 4156355 - [L] Integrase 2144 cds-WP_002215951.1 CDS COG3657 4156770 4157087 + [S] Uncharacterized protein conserved in bacteria cds-WP_002210705.1 CDS COG3636 4157093 4157407 + [K] Predicted transcriptional regulator 2145 cds-WP_002210707.1 CDS ROG2689 4157756 4158844 - NA cds-WP_002215950.1 CDS COG4643 4158841 4159800 - [S] Uncharacterized protein conserved in bacteria cds-WP_002215949.1 CDS NA 4159793 4160335 - NA cds-WP_002210709.1 CDS COG3311 4160335 4160535 - [K] Predicted transcriptional regulator cds-WP_002210710.1 CDS ROG1837 4160528 4161415 - NA cds-WP_011566205.1 CDS NA 4161437 4161760 - NA 2146 cds-WP_002215946.1 CDS NA 4162223 4162450 + NA 2147 cds-WP_002215945.1 CDS ROG5882 4162612 4164282 - NA cds-WP_002210712.1 CDS ROG7928 4164333 4165421 - NA 2148 cds-WP_002210713.1 CDS COG0582 4165500 4166699 - [L] Integrase 2149 tnpA_61 CDS COG1943 4166923 4167381 - [L] Transposase and inactivated derivatives 2150 smpB CDS COG0691 4168016 4168498 - [O] tmRNA-binding protein 2151 cds-WP_002210715.1 CDS COG2867 4168659 4169093 + [I] Oligoketide cyclase/lipid transport protein cds-WP_002210716.1 CDS COG2914 4169086 4169370 + [S] Uncharacterized protein conserved in bacteria 2152 bamE CDS COG2913 4169520 4169861 - [J] Small protein A (tmRNA-binding) recN CDS COG0497 4169975 4171636 - [L] ATPase involved in DNA repair nadK CDS COG0061 4171723 4172604 - [G] Predicted sugar kinase 2153 grpE CDS COG0576 4172728 4173306 + [O] Molecular chaperone GrpE (heat shock protein) 2154 cds-WP_002210721.1 CDS COG0372 4173414 4174694 - [C] Citrate synthase 2155 sdhC CDS COG2009 4175404 4175793 + [C] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit sdhD CDS COG2142 4175787 4176134 + [C] Succinate dehydrogenase, hydrophobic anchor subunit sdhA CDS COG1053 4176135 4177901 + [C] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit cds-WP_002210725.1 CDS COG0479 4177951 4178667 + [C] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit sucA CDS COG0567 4179023 4181830 + [C] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, odhB CDS COG0508 4181860 4183083 + [C] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) sucC CDS COG0045 4183196 4184362 + [C] Succinyl-CoA synthetase, beta subunit sucD CDS COG0074 4184362 4185234 + [C] Succinyl-CoA synthetase, alpha subunit 2156 cydA CDS COG1271 4186001 4187569 + [C] Cytochrome bd-type quinol oxidase, subunit 1 cydB CDS COG1294 4187584 4188723 + [C] Cytochrome bd-type quinol oxidase, subunit 2 cydX CDS COG4890 4188736 4188870 + [S] Predicted outer membrane lipoprotein ybgE CDS COG3790 4188860 4189147 + [S] Predicted membrane protein 2157 ybgC CDS COG0824 4189279 4189680 + [R] Predicted thioesterase tolQ CDS COG0811 4189680 4190366 + [U] Biopolymer transport proteins tolR CDS COG0848 4190379 4190807 + [U] Biopolymer transport protein tolA CDS COG3064 4190919 4192085 + [M] Membrane protein involved in colicin uptake tolB CDS COG0823 4192205 4193497 + [U] Periplasmic component of the Tol biopolymer pal CDS COG2885 4193548 4194054 + [M] Outer membrane protein and related peptidoglycan-associated cpoB CDS COG1729 4194064 4194873 + [S] Uncharacterized protein conserved in bacteria 2158 rna-A1122_RS19560 tRNA NA 4195064 4195139 + NA rna-A1122_RS19565 tRNA NA 4195167 4195242 + NA 2159 nadA CDS COG0379 4195709 4196770 + [H] Quinolinate synthase pnuC CDS COG3201 4196892 4197617 + [H] Nicotinamide mononucleotide transporter 2160 zitB CDS COG1230 4197732 4198670 - [P] Co/Zn/Cd efflux system component 2161 aroG CDS COG0722 4199119 4200135 + [E] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 2162 istB_42 CDS COG1484 4200145 4200927 - [L] DNA replication protein istA_42 CDS COG4584 4200924 4201946 - [L] Transposase and inactivated derivatives 2163 cds-WP_002210745.1 CDS COG0722 4202005 4202130 + [E] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 2164 gpmA CDS COG0588 4202312 4203064 - [G] Phosphoglycerate mutase 1 2165 cds-WP_002210747.1 CDS ROG1291 4203411 4203746 - NA 2166 galM CDS COG2017 4204039 4205108 - [G] Galactose mutarotase and related enzymes galK CDS COG0153 4205102 4206253 - [G] Galactokinase galT CDS COG1085 4206250 4207302 - [C] Galactose-1-phosphate uridylyltransferase galE CDS COG1087 4207312 4208328 - [M] UDP-glucose 4-epimerase 2167 cds-WP_002210751.1 CDS COG1266 4208688 4209506 - [R] Predicted metal-dependent membrane protease 2168 modF CDS COG1119 4209723 4211213 - [P] ABC-type molybdenum transport system, ATPase component/photorepair modE CDS COG2005 4211323 4212114 - [R] N-terminal domain of molybdenum-binding protein 2169 cds-WP_002217291.1 CDS NA 4212431 4212583 + NA 2170 modA CDS COG0725 4212818 4213597 + [P] ABC-type molybdate transport system, periplasmic component modB CDS COG4149 4213597 4214292 + [P] ABC-type molybdate transport system, permease component modC CDS COG4148 4214286 4215365 + [P] ABC-type molybdate transport system, ATPase component 2171 cds-WP_002210759.1 CDS COG0561 4215421 4216242 - [R] Predicted hydrolases of the HAD superfamily 2172 pgl CDS COG2706 4216533 4217537 + [G] 3-carboxymuconate cyclase 2173 bioA CDS COG0161 4217722 4218990 - [H] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2174 bioB CDS COG0502 4219089 4220126 + [H] Biotin synthase and related enzymes bioF CDS COG0156 4220126 4221277 + [H] 7-keto-8-aminopelargonate synthetase and related enzymes bioC CDS COG0500 4221261 4222064 + [QR] SAM-dependent methyltransferases bioD_2 CDS COG0132 4222057 4222779 + [H] Dethiobiotin synthetase 2175 cds-WP_002210766.1 CDS COG0410 4222931 4223641 - [E] ABC-type branched-chain amino acid transport systems, 2176 uvrB CDS COG0556 4224731 4226746 + [L] Helicase subunit of the DNA excision 2177 cds-WP_002210768.1 CDS COG4628 4227038 4227283 + [S] Uncharacterized conserved protein 2178 yvcK CDS COG0391 4227414 4228337 - [S] Uncharacterized conserved protein 2179 moaA CDS COG2896 4228869 4229849 + [H] Molybdenum cofactor biosynthesis enzyme moaC CDS COG0315 4229950 4230429 + [H] Molybdenum cofactor biosynthesis enzyme moaD CDS COG1977 4230426 4230671 + [H] Molybdopterin converting factor, small subunit moaE CDS COG0314 4230674 4231126 + [H] Molybdopterin converting factor, large subunit 2180 cds-WP_002210775.1 CDS COG0670 4231269 4231979 + [R] Integral membrane protein, interacts with FtsH 2181 tnpA_62 CDS COG1943 4232214 4232672 + [L] Transposase and inactivated derivatives 2182 betA CDS COG2303 4232901 4234604 - [E] Choline dehydrogenase and related flavoproteins betB CDS COG1012 4234627 4236099 - [C] NAD-dependent aldehyde dehydrogenases betI CDS COG1309 4236157 4236753 - [K] Transcriptional regulator 2183 cds-WP_002228035.1 CDS COG1292 4237118 4239166 + [M] Choline-glycine betaine transporter 2184 cds-WP_002214199.1 CDS COG0583 4239398 4240291 + [K] Transcriptional regulator 2185 cds-WP_002214197.1 CDS COG0697 4240329 4241177 - [GER] Permeases of the drug/metabolite transporter (DMT) 2186 xapA CDS COG0005 4241523 4242386 + [F] Purine nucleoside phosphorylase 2187 cds-A1122_RS19815 CDS ROG5251 4242525 4243169 + NA 2188 tnpA_63 CDS COG1943 4243315 4243773 + [L] Transposase and inactivated derivatives 2189 cds-WP_002210776.1 CDS COG3595 4244188 4245117 + [S] Uncharacterized conserved protein 2190 dusC CDS COG0042 4245417 4246355 + [J] tRNA-dihydrouridine synthase 2191 cds-WP_002210778.1 CDS ROG7027 4246429 4246608 - NA 2192 pbpG CDS COG1686 4246947 4247882 + [M] D-alanyl-D-alanine carboxypeptidase 2193 dld CDS COG0277 4248003 4249715 - [C] FAD/FMN-containing dehydrogenases 2194 cyaB CDS COG1437 4249925 4250464 + [F] Adenylate cyclase, class 2 (thermophilic) 2195 yajD CDS ROG0341 4250490 4250831 - NA 2196 cds-WP_002210785.1 CDS NA 4251144 4252247 + NA 2197 cds-WP_002210786.1 CDS COG2261 4252432 4252680 + [S] Predicted membrane protein 2198 phnC CDS COG3638 4252888 4253724 + [P] ABC-type phosphate/phosphonate transport system, ATPase component phnD CDS COG3221 4253761 4254690 + [P] ABC-type phosphate/phosphonate transport system, periplasmic component phnE CDS COG3639 4254793 4255653 + [P] ABC-type phosphate/phosphonate transport system, permease component phnE_2 CDS COG3639 4255656 4256537 + [P] ABC-type phosphate/phosphonate transport system, permease component 2199 cds-WP_002210791.1 CDS COG4807 4256783 4257256 + [S] Uncharacterized protein conserved in bacteria 2200 urtA CDS COG0683 4257691 4258959 + [E] ABC-type branched-chain amino acid transport systems, urtB CDS COG0559 4259083 4260684 + [E] Branched-chain amino acid ABC-type transport system, urtC CDS COG4177 4260684 4261760 + [E] ABC-type branched-chain amino acid transport system, urtD CDS COG4674 4261757 4262593 + [R] Uncharacterized ABC-type transport system, ATPase component urtE CDS COG0410 4262687 4263385 + [E] ABC-type branched-chain amino acid transport systems, 2201 cds-WP_002210797.1 CDS NA 4263500 4264357 + NA cds-WP_002210798.1 CDS COG0076 4264381 4265796 + [E] Glutamate decarboxylase and related PLP-dependent proteins 2202 sseA CDS COG2897 4265951 4266805 - [P] Rhodanese-related sulfurtransferase 2203 cds-A1122_RS24475 CDS COG1732 4267541 4268473 + [M] Periplasmic glycine betaine/choline-binding (lipo)protein of an cds-WP_002210801.1 CDS COG1174 4268734 4269888 + [E] ABC-type proline/glycine betaine transport systems, permease cds-WP_002210802.1 CDS COG1125 4269885 4270823 + [E] ABC-type proline/glycine betaine transport systems, ATPase cds-WP_002210803.1 CDS COG1174 4270820 4271656 + [E] ABC-type proline/glycine betaine transport systems, permease 2204 adiC CDS COG0531 4272134 4273468 + [E] Amino acid transporters cds-WP_002210805.1 CDS COG1982 4273538 4275844 + [E] Arginine/lysine/ornithine decarboxylases 2205 cds-WP_002210806.1 CDS COG1824 4275962 4276165 - [P] Permease, similar to cation transporters 2206 yedA CDS COG0697 4276290 4277180 - [GER] Permeases of the drug/metabolite transporter (DMT) 2207 ompF2 CDS COG3203 4277592 4278707 - [M] Outer membrane protein (porin) 2208 dinG CDS COG1199 4278977 4281157 + [KL] Rad3-related DNA helicases 2209 katA CDS COG0753 4281225 4282664 - [P] Catalase 2210 cds-WP_002210812.1 CDS ROG1990 4283025 4283567 + NA 2211 tyrP CDS COG0814 4283824 4285032 - [E] Amino acid permeases 2212 cds-WP_002210814.1 CDS COG1058 4285651 4286844 + [R] Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis 2213 eco CDS COG4574 4286902 4287411 - [R] Serine protease inhibitor ecotin yfaE CDS COG0633 4287446 4287703 - [C] Ferredoxin nrdB CDS COG0208 4287707 4288837 - [F] Ribonucleotide reductase, beta subunit nrdA CDS COG0209 4289000 4291288 - [F] Ribonucleotide reductase, alpha subunit 2214 ubiG CDS COG2227 4291782 4292510 - [H] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 2215 gyrA CDS COG0188 4292772 4295447 + [L] Type IIA topoisomerase (DNA gyrase/topo II, 2216 rcsC CDS COG0642 4295659 4298508 + [T] Signal transduction histidine kinase 2217 rcsB CDS COG2197 4298576 4299229 - [TK] Response regulator containing a CheY-like receiver rcsD CDS COG0642 4299232 4301924 - [T] Signal transduction histidine kinase cds-WP_002210825.1 CDS NA 4301948 4303102 - NA 2218 cds-WP_002210826.1 CDS COG3203 4304205 4305320 + [M] Outer membrane protein (porin) 2219 tnpA_64 CDS COG1943 4305522 4305980 + [L] Transposase and inactivated derivatives 2220 rna-A1122_RS20085 tRNA NA 4306414 4306501 + NA rna-A1122_RS20090 tRNA NA 4306507 4306582 + NA 2221 ampH CDS COG1680 4306770 4307936 - [V] Beta-lactamase class C and other penicillin 2222 cds-WP_002208870.1 CDS COG2211 4308211 4309737 - [G] Na+/melibiose symporter and related transporters 2223 cds-WP_002208869.1 CDS COG2220 4310114 4311142 + [R] Predicted Zn-dependent hydrolases of the beta-lactamase 2224 cds-WP_002208868.1 CDS COG0840 4311216 4313003 - [NT] Methyl-accepting chemotaxis protein 2225 ycoA CDS COG4571 4313425 4314360 - [M] Outer membrane protease 2226 cds-WP_002208866.1 CDS NA 4314532 4314774 - NA 2227 cds-WP_002208864.1 CDS COG1974 4314980 4315702 - [KT] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 2228 cds-WP_002208863.1 CDS NA 4316030 4316455 + NA 2229 otnK CDS COG3395 4316666 4317970 + [S] Uncharacterized protein conserved in bacteria cds-A1122_RS20145 CDS COG0235 4318003 4318676 + [G] Ribulose-5-phosphate 4-epimerase and related epimerases and cds-WP_002208861.1 CDS COG1349 4318679 4319491 + [KG] Transcriptional regulators of sugar metabolism otnI CDS COG3622 4319467 4320261 + [G] Hydroxypyruvate isomerase 2230 cds-WP_002208859.1 CDS NA 4320875 4321165 + NA cds-WP_002208858.1 CDS NA 4321211 4321828 + NA cds-WP_002208857.1 CDS NA 4321833 4322027 + NA cds-WP_002208856.1 CDS COG4386 4322024 4323532 + [R] Mu-like prophage tail sheath protein gpL cds-WP_002208855.1 CDS ROG7545 4323554 4323922 + NA cds-WP_002208854.1 CDS NA 4323924 4324223 + NA 2231 cds-WP_002208853.1 CDS NA 4324344 4325837 + NA 2232 cds-WP_002208852.1 CDS COG4228 4326104 4327510 + [R] Mu-like prophage DNA circulation protein cds-WP_002208850.1 CDS COG4379 4327507 4328562 + [R] Mu-like prophage tail protein gpP cds-WP_002215460.1 CDS COG4384 4328578 4329174 + [S] Mu-like prophage protein gp45 cds-WP_002208848.1 CDS COG4381 4329171 4329626 + [S] Mu-like prophage protein gp46 cds-WP_002208847.1 CDS COG3299 4329630 4330766 + [S] Uncharacterized homolog of phage Mu protein cds-WP_002215458.1 CDS COG3778 4330763 4331023 + [S] Uncharacterized protein conserved in bacteria cds-WP_002208846.1 CDS COG3778 4331020 4331367 + [S] Uncharacterized protein conserved in bacteria 2233 cds-WP_002208845.1 CDS COG5301 4331464 4332243 + [R] Phage-related tail fibre protein 2234 cds-WP_002208843.1 CDS COG1737 4332541 4333281 + [K] Transcriptional regulators 2235 cds-WP_002208842.1 CDS COG2723 4333572 4335008 + [G] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase 2236 cds-WP_002208841.1 CDS NA 4335134 4335496 - NA 2237 cds-A1122_RS24085 CDS COG3728 4335836 4335925 - [L] Phage terminase, small subunit 2238 cds-WP_002208840.1 CDS NA 4336196 4336684 - NA cds-WP_002208839.1 CDS NA 4336697 4337845 - NA 2239 cds-WP_002230704.1 CDS COG5519 4338202 4338585 - [L] Superfamily II helicase and inactivated derivatives rna-A1122_RS20270 tRNA NA 4338635 4338711 - NA 2240 yejM CDS COG3083 4338816 4340612 - [R] Predicted hydrolase of alkaline phosphatase superfamily cds-WP_002208836.1 CDS COG3082 4340640 4340867 - [S] Uncharacterized protein conserved in bacteria 2241 yejK CDS COG3081 4341045 4342049 + [R] Nucleoid-associated protein 2242 tnpA_65 CDS COG1943 4342250 4342708 + [L] Transposase and inactivated derivatives 2243 rplY CDS COG1825 4342847 4343131 - [J] Ribosomal protein L25 (general stress protein 2244 cds-WP_002208833.1 CDS COG1061 4343293 4345050 - [KL] DNA or RNA helicases of superfamily 2245 rsuA CDS COG1187 4345564 4346271 + [J] 16S rRNA uridine-516 pseudouridylate synthase and 2246 cds-WP_002208831.1 CDS COG2814 4346390 4347589 + [G] Arabinose efflux permease 2247 cds-WP_002208829.1 CDS NA 4348556 4348900 + NA 2248 yejF CDS COG4172 4348961 4350553 - [R] ABC-type uncharacterized transport system, duplicated ATPase cds-WP_002353954.1 CDS COG4239 4350555 4351580 - [R] ABC-type uncharacterized transport system, permease component cds-WP_002208826.1 CDS COG4174 4351583 4352683 - [R] ABC-type uncharacterized transport system, permease component cds-WP_002208825.1 CDS COG0747 4352693 4354501 - [E] ABC-type dipeptide transport system, periplasmic component 2249 cds-WP_002229119.1 CDS COG2200 4354583 4356055 - [T] FOG: EAL domain 2250 mepS CDS COG0791 4356750 4357334 - [M] Cell wall-associated hydrolases (invasion-associated proteins) 2251 cds-WP_002208820.1 CDS NA 4357776 4358477 - NA cds-WP_002208819.1 CDS COG0523 4358536 4359519 - [R] Putative GTPases (G3E family) 2252 cds-WP_002208816.1 CDS COG2186 4360327 4361070 + [K] Transcriptional regulators 2253 cds-WP_002208815.1 CDS COG0246 4361214 4362686 - [G] Mannitol-1-phosphate/altronate dehydrogenases 2254 uxuA CDS COG1312 4363271 4364464 + [G] D-mannonate dehydratase 2255 yeiP CDS COG0231 4364604 4365176 - [J] Translation elongation factor P (EF-P)/translation initiation 2256 mtr CDS COG0814 4365280 4366524 - [E] Amino acid permeases 2257 cds-WP_002208811.1 CDS COG0727 4366899 4367153 + [R] Predicted Fe-S-cluster oxidoreductase 2258 cds-WP_002208810.1 CDS COG1028 4367222 4368037 - [IQR] Dehydrogenases with different specificities (related to cds-WP_002208809.1 CDS COG1052 4368048 4369013 - [CHR] Lactate dehydrogenase and related dehydrogenases cds-WP_002208808.1 CDS COG3970 4369010 4370152 - [R] Fumarylacetoacetate (FAA) hydrolase family protein 2259 cds-WP_002208807.1 CDS COG1012 4370504 4372000 + [C] NAD-dependent aldehyde dehydrogenases xylB_2 CDS COG1070 4372004 4373557 + [G] Sugar (pentulose and hexulose) kinases rpiA_2 CDS COG0120 4373577 4374287 + [G] Ribose 5-phosphate isomerase 2260 cds-WP_002208804.1 CDS COG1879 4374427 4375515 + [G] ABC-type sugar transport system, periplasmic component cds-WP_002208803.1 CDS COG1129 4375624 4377198 + [G] ABC-type sugar transport system, ATPase component cds-WP_002208802.1 CDS COG1172 4377234 4378232 + [G] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 2261 cds-WP_002208801.1 CDS COG1051 4378345 4378800 - [F] ADP-ribose pyrophosphatase 2262 fruB CDS COG4668 4379062 4380195 + [G] Mannitol/fructose-specific phosphotransferase system, IIA domain fruK CDS COG1105 4380192 4381130 + [G] Fructose-1-phosphate kinase and related fructose-6-phosphate kinase fruA CDS COG1299 4381145 4382845 + [G] Phosphotransferase system, fructose-specific IIC component 2263 cds-WP_002208796.1 CDS COG3710 4383170 4383814 + [K] DNA-binding winged-HTH domains cds-WP_002216523.1 CDS NA 4383811 4384299 + NA 2264 psaA CDS NA 4384844 4385320 + NA 2265 psaB CDS COG3121 4385447 4386268 + [NU] P pilus assembly protein, chaperone PapD psaC CDS COG3188 4386352 4388823 + [NU] P pilus assembly protein, porin PapC 2266 nfo CDS COG0648 4388910 4389767 - [L] Endonuclease IV 2267 cds-WP_002208790.1 CDS COG2855 4389931 4391019 - [S] Predicted membrane protein 2268 yieE CDS COG0583 4391677 4392549 + [K] Transcriptional regulator 2269 cds-WP_002208786.1 CDS COG0833 4392807 4394318 + [E] Amino acid transporters 2270 yiuA CDS COG0614 4394604 4395749 + [P] ABC-type Fe3+-hydroxamate transport system, periplasmic component cds-WP_002215451.1 CDS COG0609 4395944 4397026 + [P] ABC-type Fe3+-siderophore transport system, permease component cds-WP_002208783.1 CDS COG1120 4397023 4397811 + [PH] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components cds-WP_002208782.1 CDS COG4771 4398071 4400068 + [P] Outer membrane receptor for ferrienterochelin and 2271 cds-WP_002208781.1 CDS COG0625 4400338 4400958 - [O] Glutathione S-transferase 2272 cds-WP_002215448.1 CDS COG0560 4401112 4401762 - [E] Phosphoserine phosphatase 2273 cds-WP_002208778.1 CDS COG3491 4402249 4403316 + [R] Isopenicillin N synthase and related dioxygenases 2274 cds-WP_002208777.1 CDS COG1464 4403544 4404368 + [P] ABC-type metal ion transport system, periplasmic cds-WP_002208776.1 CDS COG1135 4404365 4405351 + [P] ABC-type metal ion transport system, ATPase cds-WP_002208775.1 CDS COG2011 4405348 4406019 + [P] ABC-type metal ion transport system, permease 2275 cds-WP_002208774.1 CDS COG1686 4406354 4407559 + [M] D-alanyl-D-alanine carboxypeptidase 2276 cds-WP_002215443.1 CDS COG0814 4407999 4409300 - [E] Amino acid permeases 2277 deoR CDS COG1349 4410399 4411163 - [KG] Transcriptional regulators of sugar metabolism 2278 deoC_3 CDS COG0274 4411393 4412064 - [F] Deoxyribose-phosphate aldolase 2279 ybjG CDS COG0671 4412322 4412927 - [I] Membrane-associated phospholipid phosphatase cds-WP_002208767.1 CDS COG3907 4412927 4413598 - [R] PAP2 (acid phosphatase) superfamily protein 2280 cds-WP_002208766.1 CDS COG2985 4414075 4415763 - [R] Predicted permease 2281 cds-WP_002208765.1 CDS COG0695 4416173 4416436 - [O] Glutaredoxin and related proteins 2282 cds-WP_002216036.1 CDS NA 4416899 4417213 + NA 2283 cds-WP_002208763.1 CDS ROG6463 4417355 4417840 + NA 2284 potF CDS COG0687 4418358 4419467 + [E] Spermidine/putrescine-binding periplasmic protein potG CDS COG3842 4419638 4420771 + [E] ABC-type spermidine/putrescine transport systems, ATPase components potH CDS COG1176 4420796 4421761 + [E] ABC-type spermidine/putrescine transport system, permease component potI CDS COG1177 4421758 4422603 + [E] ABC-type spermidine/putrescine transport system, permease component 2285 cds-WP_002208757.1 CDS NA 4422728 4423192 + NA 2286 rlmC CDS COG2265 4423276 4424406 + [J] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 2287 cds-A1122_RS20645 CDS COG0834 4424533 4424820 - [ET] ABC-type amino acid transport/signal transduction systems, 2288 istA_43 CDS COG4584 4424894 4425916 + [L] Transposase and inactivated derivatives istB_43 CDS COG1484 4425913 4426695 + [L] DNA replication protein 2289 cds-A1122_RS20660 CDS NA 4426761 4426979 - NA 2290 cds-WP_002210701.1 CDS COG1953 4427318 4428802 + [FH] Cytosine/uracil/thiamine/allantoin permeases 2291 rna-A1122_RS20675 tRNA NA 4428859 4428935 - NA 2292 dnaQ CDS COG0847 4429048 4429812 - [L] DNA polymerase III, epsilon subunit and 2293 rnhA CDS COG0328 4429882 4430346 + [L] Ribonuclease HI 2294 cds-WP_002210698.1 CDS COG0500 4430401 4431120 - [QR] SAM-dependent methyltransferases 2295 gloB CDS COG0491 4431165 4431920 + [R] Zn-dependent hydrolases, including glyoxylases 2296 mltD CDS COG1388 4431992 4433380 + [M] FOG: LysM repeat 2297 cds-WP_002210695.1 CDS COG3021 4433422 4434183 - [S] Uncharacterized protein conserved in bacteria 2298 cds-WP_002210694.1 CDS NA 4434565 4435011 - NA dkgB CDS COG0656 4435064 4435867 - [R] Aldo/keto reductases, related to diketogulonate reductase 2299 rna-A1122_RS20720 tRNA NA 4436226 4436302 - NA rrf_6 rRNA NA 4436428 4436543 - NA rna-A1122_RS20730 rRNA NA 4436653 4439559 - NA rna-A1122_RS20735 tRNA NA 4439812 4439887 - NA rna-A1122_RS20740 rRNA NA 4440024 4441566 - NA 2300 gmhB CDS COG0241 4442008 4442574 - [E] Histidinol phosphatase and related phosphatases 2301 metN CDS COG1135 4442761 4443792 + [P] ABC-type metal ion transport system, ATPase cds-WP_002212160.1 CDS COG2011 4443785 4444438 + [P] ABC-type metal ion transport system, permease cds-WP_002212159.1 CDS COG1464 4444502 4445317 + [P] ABC-type metal ion transport system, periplasmic 2302 rcsF CDS ROG4703 4445435 4445842 + NA tsaA CDS COG1720 4445839 4446546 + [S] Uncharacterized conserved protein proS CDS COG0442 4446650 4448368 + [J] Prolyl-tRNA synthetase 2303 nlpE CDS COG3015 4448502 4449185 - [MP] Uncharacterized lipoprotein NlpE involved in copper arfB CDS COG1186 4449270 4449686 - [J] Protein chain release factor B cds-WP_002212153.1 CDS COG4681 4449689 4450237 - [S] Uncharacterized protein conserved in bacteria 2304 cds-WP_002212152.1 CDS NA 4450479 4450679 + NA rof CDS COG4568 4450666 4450926 + [K] Transcriptional antiterminator 2305 cds-WP_002212150.1 CDS COG2863 4451191 4451508 - [C] Cytochrome c553 2306 tilS CDS COG0037 4451745 4453127 - [D] Predicted ATPase of the PP-loop superfamily cds-WP_002212148.1 CDS COG0346 4453129 4453527 - [E] Lactoylglutathione lyase and related lyases 2307 accA CDS COG0825 4453711 4454670 - [I] Acetyl-CoA carboxylase alpha subunit dnaE CDS COG0587 4454683 4458165 - [L] DNA polymerase III, alpha subunit rnhB CDS COG0164 4458328 4458924 - [L] Ribonuclease HII lpxB CDS COG0763 4458921 4460105 - [M] Lipid A disaccharide synthetase lpxA CDS COG1043 4460109 4460897 - [M] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase fabZ CDS COG0764 4460901 4461446 - [I] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases lpxD CDS COG1044 4461604 4462626 - [M] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase skp CDS COG2825 4462630 4463127 - [M] Outer membrane protein bamA CDS COG4775 4463285 4465672 - [M] Outer membrane protein/protective antigen OMA87 rseP CDS COG0750 4465709 4467064 - [M] Predicted membrane-associated Zn-dependent proteases 1 cdsA CDS COG0575 4467093 4467941 - [I] CDP-diglyceride synthetase ispU CDS COG0020 4467951 4468709 - [I] Undecaprenyl pyrophosphate synthase ispC CDS COG0743 4468933 4470129 - [I] 1-deoxy-D-xylulose 5-phosphate reductoisomerase frr CDS COG0233 4470343 4470900 - [J] Ribosome recycling factor pyrH CDS COG0528 4471036 4471761 - [F] Uridylate kinase tsf CDS COG0264 4471970 4472827 - [J] Translation elongation factor Ts rpsB CDS COG0052 4472955 4473680 - [J] Ribosomal protein S2 2308 map_2 CDS COG0024 4474115 4474906 + [J] Methionine aminopeptidase glnD CDS COG2844 4474966 4477647 + [O] UTP:GlnB (protein PII) uridylyltransferase dapD CDS COG2171 4477822 4478646 + [E] Tetrahydrodipicolinate N-succinyltransferase 2309 cds-WP_002212127.1 CDS ROG5092 4478770 4479159 + NA 2310 cds-WP_002212126.1 CDS COG0716 4479249 4479698 - [C] Flavodoxins truC CDS COG0564 4479726 4480499 - [J] Pseudouridylate synthases, 23S RNA-specific cds-WP_002212124.1 CDS COG3098 4480499 4480831 - [S] Uncharacterized protein conserved in bacteria 2311 tnpA_66 CDS COG1943 4481085 4481543 - [L] Transposase and inactivated derivatives 2312 syd CDS ROG1988 4482233 4482784 - NA 2313 queF CDS COG2904 4482916 4483761 + [S] Uncharacterized protein conserved in bacteria 2314 ppnN CDS COG1611 4483914 4485278 + [R] Predicted Rossmann fold nucleotide-binding protein 2315 xni CDS COG0258 4485538 4486293 + [L] 5'-3' exonuclease (including N-terminal domain of 2316 rlmM CDS COG2933 4486544 4487650 - [R] Predicted SAM-dependent methyltransferase cds-WP_002212118.1 CDS COG2363 4487643 4488038 - [S] Uncharacterized small membrane protein 2317 cds-WP_002212117.1 CDS COG0583 4488204 4489121 - [K] Transcriptional regulator 2318 cds-WP_002231328.1 CDS ROG7894 4489585 4489704 - NA 2319 csdA CDS COG0520 4489781 4490986 + [E] Selenocysteine lyase csdE CDS COG2166 4491121 4491564 + [R] SufE protein probably involved in Fe-S 2320 tcdA CDS COG1179 4491600 4492427 - [H] Dinucleotide-utilizing enzymes involved in molybdopterin and 2321 mltA CDS COG2821 4492570 4493742 - [M] Membrane-bound lytic murein transglycosylase 2322 rna-A1122_RS21005 tRNA NA 4493958 4494034 + NA rna-A1122_RS21010 tRNA NA 4494158 4494234 + NA 2323 amiC CDS COG0860 4494464 4495714 - [M] N-acetylmuramoyl-L-alanine amidase 2324 argA CDS COG0548 4495950 4497275 + [E] Acetylglutamate kinase 2325 recD CDS COG0507 4497430 4499388 - [L] ATP-dependent exoDNAse (exonuclease V), alpha subunit recB CDS COG1074 4499385 4503047 - [L] ATP-dependent exoDNAse (exonuclease V) beta subunit ptrA CDS COG1025 4503044 4505932 - [O] Secreted/periplasmic Zn-dependent peptidases, insulinase-like recC CDS COG1330 4506014 4509385 - [L] Exonuclease V gamma subunit 2326 cds-WP_002228047.1 CDS COG4967 4509520 4509930 - [NU] Tfp pilus assembly protein PilV cds-WP_002211629.1 CDS NA 4509918 4510388 - NA cds-WP_002211630.1 CDS COG4795 4510385 4510993 - [U] Type II secretory pathway, component PulJ cds-A1122_RS24710 CDS COG2165 4510984 4511160 - [NU] Type II secretory pathway, pseudopilin PulG 2327 istB_44 CDS COG1484 4511228 4512010 - [L] DNA replication protein istA_44 CDS COG4584 4512007 4513029 - [L] Transposase and inactivated derivatives cds-WP_002211631.1 CDS COG3321 4513043 4516456 - [Q] Polyketide synthase modules and related proteins 2328 cds-WP_002211632.1 CDS COG1629 4516607 4518679 - [P] Outer membrane receptor proteins, mostly Fe 2329 pepT_2 CDS COG2195 4519067 4520299 - [E] Di- and tripeptidases cds-WP_002211634.1 CDS COG2978 4520377 4521933 - [H] Putative p-aminobenzoyl-glutamate transporter 2330 cds-WP_002211636.1 CDS COG4886 4522652 4524469 + [S] Leucine-rich repeat (LRR) protein cds-WP_002214025.1 CDS COG4886 4524677 4525552 + [S] Leucine-rich repeat (LRR) protein 2331 cds-WP_011055744.1 CDS NA 4525633 4525719 + NA 2332 cds-WP_002211637.1 CDS COG4886 4526115 4527995 + [S] Leucine-rich repeat (LRR) protein 2333 yapH CDS COG3468 4528098 4539215 - [MU] Type V secretory pathway, adhesin AidA 2334 cueP CDS ROG4621 4540069 4540656 - NA 2335 cds-WP_002211641.1 CDS NA 4540934 4542424 + NA 2336 cds-WP_002211642.1 CDS COG0841 4542559 4545678 - [V] Cation/multidrug efflux pump cds-WP_002211643.1 CDS COG0845 4545691 4546968 - [M] Membrane-fusion protein 2337 cds-WP_002214016.1 CDS NA 4547407 4547604 + NA cds-WP_002214014.1 CDS COG2200 4547608 4549974 + [T] FOG: EAL domain 2338 cds-WP_100067904.1-7 CDS COG2963 4551074 4551524 - [L] Transposase and inactivated derivatives cds-WP_100067904.1-7_2 CDS NA 4550170 4551074 - NA 2339 cds-WP_002211645.1 CDS COG2211 4551796 4553220 + [G] Na+/melibiose symporter and related transporters 2340 cds-WP_002211646.1 CDS NA 4553479 4555659 - NA 2341 cds-WP_002211785.1 CDS NA 870 1703 - NA cds-WP_002211786.1 CDS NA 1726 3300 - NA cds-WP_002211787.1 CDS ROG5257 3334 4590 - NA cds-WP_002211788.1 CDS NA 4593 5234 - NA 2342 cds-WP_000176291.1 CDS NA 5430 5696 - NA cds-WP_002211789.1 CDS COG2401 5706 6596 - [R] ABC-type ATPase fused to a predicted cds-WP_002211790.1 CDS NA 6602 6856 - NA cds-WP_002211791.1 CDS COG2401 6849 7487 - [R] ABC-type ATPase fused to a predicted cds-WP_002211792.1 CDS COG1475 7484 8152 - [K] Predicted transcriptional regulators cds-WP_002228791.1 CDS ROG8515 8152 8850 - NA 2343 cds-WP_002211794.1 CDS COG1061 8915 10474 + [KL] DNA or RNA helicases of superfamily cds-WP_002214131.1 CDS ROG3402 10477 10755 + NA cds-WP_002211796.1 CDS NA 10815 11237 + NA cds-WP_002214134.1 CDS NA 11242 11769 + NA 2344 cds-WP_002211799.1 CDS NA 12091 12741 + NA 2345 cds-WP_002214137.1 CDS NA 12826 13053 + NA 2346 cds-WP_002211801.1 CDS NA 13692 14174 - NA 2347 cds-WP_002211802.1 CDS NA 14380 14661 - NA 2348 tnpA_67 CDS COG1943 14861 15319 - [L] Transposase and inactivated derivatives 2349 cds-WP_002214145.1 CDS NA 15528 16097 - NA cds-WP_002213303.1 CDS NA 16110 16856 - NA cds-WP_002214148.1 CDS COG0419 16846 18762 - [L] ATPase involved in DNA repair cds-WP_002214151.1 CDS NA 18771 19037 - NA cds-WP_002213300.1 CDS NA 18992 20077 - NA 2350 cds-WP_002213298.1 CDS COG0715 20493 21515 + [P] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 2351 cds-WP_002214160.1 CDS NA 21875 22519 - NA 2352 repA CDS ROG1203 23264 24328 + NA 2353 cds-WP_002222711.1 CDS NA 24897 25109 - NA cds-WP_002227818.1 CDS NA 25109 25444 - NA cds-WP_002228796.1 CDS NA 25441 25620 - NA cds-WP_002228797.1 CDS NA 25661 25936 - NA 2354 cds-WP_002222869.1 CDS NA 26004 26414 - NA cds-WP_002222868.1 CDS NA 26398 26769 - NA 2355 cds-WP_002222866.1 CDS COG2268 26923 27753 - [S] Uncharacterized protein conserved in bacteria cds-WP_002213439.1 CDS NA 27757 27957 - NA 2356 cds-WP_002213437.1 CDS COG0468 28048 29124 - [L] RecA/RadA recombinase cds-WP_000920226.1 CDS NA 29127 29393 - NA cds-WP_002225551.1 CDS COG0258 29393 30337 - [L] 5'-3' exonuclease (including N-terminal domain of cds-WP_002213132.1 CDS NA 30398 31426 - NA 2357 cds-WP_002213135.1 CDS COG1634 31546 31977 - [R] Uncharacterized Rossmann fold enzyme 2358 cds-WP_002215095.1 CDS ROG0065 32198 32449 + NA 2359 cds-WP_002213141.1 CDS ROG3866 32522 33085 + NA 2360 cds-WP_002425587.1 CDS NA 33115 33540 - NA cds-A1122_RS21400 CDS NA 33555 34043 - NA 2361 istB_45 CDS COG1484 34110 34892 - [L] DNA replication protein istA_45 CDS COG4584 34889 35911 - [L] Transposase and inactivated derivatives 2362 cds-WP_002211744.1 CDS ROG0611 36035 38044 - NA 2363 cds-WP_002211745.1 CDS NA 38117 38347 - NA 2364 cds-WP_002211746.1 CDS COG4734 39060 39566 - [R] Antirestriction protein 2365 cds-WP_002211747.1 CDS NA 39965 40744 - NA cds-WP_002215082.1 CDS NA 40798 41217 - NA cds-WP_002211748.1 CDS NA 41228 41449 - NA cds-WP_002211749.1 CDS COG0863 41449 42126 - [L] DNA modification methylase 2366 cds-WP_002211750.1 CDS NA 42627 42827 + NA 2367 cds-WP_002211751.1 CDS COG1672 42989 44380 - [R] Predicted ATPase (AAA+ superfamily) 2368 cds-A1122_RS23105 CDS NA 44508 44628 + NA 2369 cds-WP_002215070.1 CDS NA 44765 45736 - NA cds-WP_002211752.1 CDS COG1192 45733 46938 - [D] ATPases involved in chromosome partitioning 2370 cds-WP_002211753.1 CDS COG2161 47240 47467 + [D] Antitoxin of toxin-antitoxin stability system cds-WP_002215068.1 CDS COG2026 47467 47793 + [JD] Cytotoxic translational repressor of toxin-antitoxin stability 2371 cds-WP_002211754.1 CDS COG1961 47993 48613 + [L] Site-specific recombinases, DNA invertase Pin homologs 2372 cds-WP_002215065.1 CDS COG5464 48679 49620 + [S] Uncharacterized conserved protein 2373 cds-WP_002211756.1 CDS NA 49643 49918 - NA 2374 cds-WP_002211757.1 CDS ROG7817 50658 51146 + NA 2375 cds-WP_002211758.1 CDS COG1502 51224 52987 + [I] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 2376 cds-A1122_RS24495 CDS NA 53076 53190 - NA cds-A1122_RS21505 CDS COG3344 53215 53687 - [L] Retron-type reverse transcriptase 2377 cds-A1122_RS21520 CDS COG5464 54505 54783 + [S] Uncharacterized conserved protein 2378 cds-WP_002211760.1 CDS COG3547 55063 56085 - [L] Transposase and inactivated derivatives 2379 cds-A1122_RS24500 CDS NA 56245 56519 - NA cds-WP_002209743.1-20 CDS COG3328 56554 57762 - [L] Transposase and inactivated derivatives 2380 caf1R CDS COG2207 58111 59016 - [K] AraC-type DNA-binding domain-containing proteins 2381 caf1M CDS COG3121 59344 60120 + [NU] P pilus assembly protein, chaperone PapD caf1A CDS COG3188 60145 62646 + [NU] P pilus assembly protein, porin PapC 2382 caf1 CDS NA 62727 63239 + NA 2383 cds-WP_002353208.1 CDS COG0582 63999 65102 + [L] Integrase 2384 cds-WP_002228802.1 CDS ROG5128 65097 65483 - NA 2385 cds-WP_002228800.1 CDS NA 65746 65958 + NA 2386 cds-WP_002211766.1 CDS COG4547 66068 68434 + [H] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole 2387 cds-WP_002211767.1 CDS COG5271_4X 68531 69766 + NA 2388 dnaE_2 CDS COG0587 69947 73060 + [L] DNA polymerase III, alpha subunit istA_46 CDS COG4584 73074 74096 + [L] Transposase and inactivated derivatives istB_46 CDS COG1484 74093 74875 + [L] DNA replication protein 2389 cds-WP_002211769.1 CDS NA 75009 75617 - NA 2390 cds-WP_002211770.1 CDS COG5301 75919 78807 - [R] Phage-related tail fibre protein 2391 cds-WP_002211771.1 CDS NA 78888 79466 - NA cds-WP_002214118.1 CDS COG4733 79523 84154 - [S] Phage-related protein, tail component cds-WP_002211773.1 CDS COG4723 84176 84763 - [S] Phage-related protein, tail component cds-WP_002211774.1 CDS COG1310 84751 85548 - [R] Predicted metal-dependent protease of the PAD1/JAB1 cds-WP_002211775.1 CDS COG4672 85541 86239 - [S] Phage-related protein cds-WP_000440566.1 CDS COG4718 86329 86664 - [S] Phage-related protein cds-WP_002211776.1 CDS COG3941 86706 91283 - [R] Mu-like prophage protein cds-WP_000952684.1 CDS NA 91291 91515 - NA 2392 cds-WP_000163862.1 CDS ROG2513 91641 91958 - NA cds-WP_002211778.1 CDS COG5492 92018 92764 - [N] Bacterial surface proteins containing Ig-like domains 2393 cds-WP_002211779.1 CDS NA 92839 93222 - NA cds-WP_002211780.1 CDS ROG5264 93224 93697 - NA cds-WP_001027662.1 CDS NA 93688 94032 - NA 2394 cds-WP_002211781.1 CDS ROG3266 94130 94963 - NA cds-WP_002211782.1 CDS ROG6219 94963 95397 - NA cds-WP_002211783.1 CDS COG5492 95441 96103 - [N] Bacterial surface proteins containing Ig-like domains 2395 cds-WP_002211784.1 CDS NA 96178 97053 - NA 2396 cds-WP_223661135.1 CDS NA 253 648 + NA 2397 pst CDS NA 683 1756 - NA 2398 cds-WP_002221218.1 CDS ROG3836 1985 2290 + NA 2399 pla CDS COG4571 2533 3471 + [M] Outer membrane protease 2400 cds-WP_002213446.1 CDS COG2932 3658 3957 - [K] Predicted transcriptional regulator cds-WP_002225538.1 CDS COG4683 3957 4298 - [S] Uncharacterized protein conserved in bacteria 2401 istA_47 CDS COG4584 5567 6589 + [L] Transposase and inactivated derivatives istB_47 CDS COG1484 6586 7368 + [L] DNA replication protein