########################################
# Program: needle
# Rundate: Tue Apr 03 2007 17:06:24
# Commandline: needle
#    [-asequence] 1OKC.fasta
#    [-bsequence] toLookAt.fasta
#    [-outfile] marking.needle
#    -gapopen 10
#    -gapextend 0.5
# Align_format: srspair
# Report_file: marking.needle
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: SEQUENCE
# 2: Q4SFK5_TETNG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 300
# Identity:     266/300 (88.7%)
# Similarity:   284/300 (94.7%)
# Gaps:           4/300 ( 1.3%)
# Score: 1412.0
# 
#
#=======================================

SEQUENCE           1 ---SDQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAE     47
                        |:||:||.|||||||::|||||||||||||||||||||||||||:|:
Q4SFK5_TETNG       1 STMSEQAISFAKDFLAGGISAAISKTAVAPIERVKLLLQVQHASKQITAD     50

SEQUENCE          48 KQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQI     97
                     ||||||||||||||||||||||||||||||||||||||||||||||||:|
Q4SFK5_TETNG      51 KQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKKI    100

SEQUENCE          98 FLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKG    147
                     ||.|||:..||||||||||||||||||||||||||||||||||||||||.
Q4SFK5_TETNG     101 FLDGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKA    150

SEQUENCE         148 AAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTA    197
                     .|:|||.|||:|:.|||||||||||||||||||||||||||||||:||||
Q4SFK5_TETNG     151 GAEREFNGLGDCLVKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGIYDTA    200

SEQUENCE         198 KGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGAD    247
                     |||||||||.||:|||||||||||||||.||||||||||||||||||| :
Q4SFK5_TETNG     201 KGMLPDPKNTHILVSWMIAQTVTAVAGLTSYPFDTVRRRMMMQSGRKG-E    249

SEQUENCE         248 IMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFV    297
                     ||||||:|||||||:|||.||||||||||||||||||||||||||:||.:
Q4SFK5_TETNG     250 IMYTGTIDCWRKIARDEGSKAFFKGAWSNVLRGMGGAFVLVLYDELKKVI    299


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