########################################
# Program: stretcher
# Rundate: Fri 25 May 2012 09:59:49
# Commandline: stretcher
#    [-asequence] seq1.fasta
#    [-bsequence] seq2.fasta
#    [-outfile] align.txt
# Align_format: markx0
# Report_file: align.txt
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: seq1
# 2: seq2
# Matrix: EBLOSUM62
# Gap_penalty: 12
# Extend_penalty: 2
#
# Length: 20
# Identity:      10/20 (50.0%)
# Similarity:    11/20 (55.0%)
# Gaps:           0/20 ( 0.0%)
# Score: 44
# 
#
#=======================================

               10        20
  seq1 AKVSKSEREAWGRMIETYIT
           :.::: :: :::   :
  seq2 RVSKKTEREKWGCMIEYLTT
               10        20


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