RID: 8WN4AGVR016 Job Title:POLN_SINDV P03317 Polyprotein P1234 (P1234) Program: BLASTP Query: POLN_SINDV P03317 Polyprotein P1234 (P1234) (Non-structural polyprotein) (p270 nonstructural polyprotein) (Polyprotein P123') (P123') (Polyprotein P123) (P123) (mRNA-capping enzyme nsP1) (2.1.1.- {ECO:0000250|UniProtKB:P27282}) (2.7.7.- {ECO:0000269|PubMed:7831320}) (Non-structural protein 1) (Protease nsP2) (3.1.3.33 {ECO:0000250|UniProtKB:P08411}) (3.4.22.- {ECO:0000250|UniProtKB:Q8JUX6}) (3.6.1.15 {ECO:0000250|UniProtKB:Q8JUX6}) (3.6.4.13 {ECO:0000250|UniProtKB:Q8JUX6}) (Non-structural protein 2) (nsP2) (Non-structural protein 3') (nsP3') (3.1.3.84 {ECO:0000305}) (Non-structural protein 3) (nsP3) (3.1.3.84 {ECO:0000250|UniProtKB:Q8JUX6}) (RNA-directed RNA polymerase nsP4) (2.7.7.19 {ECO:0000269|PubMed:17005674}) (2.7.7.48 {ECO:0000255|PROSITE-ProRule:PRU00539, ECO:0000269|PubMed:19036396}) (Non-structural protein 4) (nsP4) ID: lcl|Query_3356(amino acid) Length: 610 Database: swissprot Non-redundant UniProtKB/SwissProt sequences Sequences producing significant alignments: Scientific Common Max Total Query E Per. Acc. Description Name Name Taxid Score Score cover Value Ident Len Accession RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Sindbis virus NA 11034 1201 1201 100% 0.0 100.00 2513 P03317.2 RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Ockelbo virus NA 31699 1181 1181 100% 0.0 98.36 2515 P27283.2 RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Aura virus NA 44158 966 966 100% 0.0 80.16 2499 Q86924.3 RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Semliki Fore... NA 11033 892 892 100% 0.0 73.81 2432 P08411.2 RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Mayaro virus... NA 374990 878 878 100% 0.0 73.65 2437 Q8QZ73.3 RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Getah virus NA 59300 878 878 100% 0.0 73.81 2467 Q5Y389.3 RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Sagiyama virus NA 59303 874 874 100% 0.0 73.32 2467 Q9JGL0.3 RecName: Full=Polyprotein nsP1234; Short=P1234; AltName:... Middelburg v... NA 11023 873 873 100% 0.0 73.37 995 P03318.2 Alignments: >RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; AltName: Full=p270 nonstructural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Sindbis virus] Sequence ID: P03317.2 Length: 2513 Range 1: 1904 to 2513 Score:1201 bits(3108), Expect:0.0, Method:Compositional matrix adjust., Identities:610/610(100%), Positives:610/610(100%), Gaps:0/610(0%) Query 1 YIFSTDTGPGHLQKKSVLQNQLTEPTLERNVLERIHAPVLDTSKEEQLKLRYQMMPTEAN 60 YIFSTDTGPGHLQKKSVLQNQLTEPTLERNVLERIHAPVLDTSKEEQLKLRYQMMPTEAN Sbjct 1904 YIFSTDTGPGHLQKKSVLQNQLTEPTLERNVLERIHAPVLDTSKEEQLKLRYQMMPTEAN 1963 Query 61 KSRYQSRKVENQKAITTERLLSGLRLYNSATDQPECYKITYPKPLYSSSVPANYSDPQFA 120 KSRYQSRKVENQKAITTERLLSGLRLYNSATDQPECYKITYPKPLYSSSVPANYSDPQFA Sbjct 1964 KSRYQSRKVENQKAITTERLLSGLRLYNSATDQPECYKITYPKPLYSSSVPANYSDPQFA 2023 Query 121 VAVCNNYLHENYPTVASYQITDEYDAYLDMVDGTVACLDTATFCPAKLRSYPKKHEYRAP 180 VAVCNNYLHENYPTVASYQITDEYDAYLDMVDGTVACLDTATFCPAKLRSYPKKHEYRAP Sbjct 2024 VAVCNNYLHENYPTVASYQITDEYDAYLDMVDGTVACLDTATFCPAKLRSYPKKHEYRAP 2083 Query 181 NIRSAVPSAMQNTLQNVLIAATKRNCNVTQMRELPTLDSATFNVECFRKYACNDEYWEEF 240 NIRSAVPSAMQNTLQNVLIAATKRNCNVTQMRELPTLDSATFNVECFRKYACNDEYWEEF Sbjct 2084 NIRSAVPSAMQNTLQNVLIAATKRNCNVTQMRELPTLDSATFNVECFRKYACNDEYWEEF 2143 Query 241 ARKPIRITTEFVTAYVARLKGPKAAALFAKTYNLVPLQEVPMDRFVMDMKRDVKVTPGTK 300 ARKPIRITTEFVTAYVARLKGPKAAALFAKTYNLVPLQEVPMDRFVMDMKRDVKVTPGTK Sbjct 2144 ARKPIRITTEFVTAYVARLKGPKAAALFAKTYNLVPLQEVPMDRFVMDMKRDVKVTPGTK 2203 Query 301 HTEERPKVQVIQAAEPLATAYLCGIHRELVRRLTAVLLPNIHTLFDMSAEDFDAIIAEHF 360 HTEERPKVQVIQAAEPLATAYLCGIHRELVRRLTAVLLPNIHTLFDMSAEDFDAIIAEHF Sbjct 2204 HTEERPKVQVIQAAEPLATAYLCGIHRELVRRLTAVLLPNIHTLFDMSAEDFDAIIAEHF 2263 Query 361 KQGDPVLETDIASFDKSQDDAMALTGLMILEDLGVDQPLLDLIECAFGEISSTHLPTGTR 420 KQGDPVLETDIASFDKSQDDAMALTGLMILEDLGVDQPLLDLIECAFGEISSTHLPTGTR Sbjct 2264 KQGDPVLETDIASFDKSQDDAMALTGLMILEDLGVDQPLLDLIECAFGEISSTHLPTGTR 2323 Query 421 FKFGAMMKSGMfltlfvntvlnvvIASRVLEERLKTSRCAAFIGDDNIIHGVVSDKEMAE 480 FKFGAMMKSGMFLTLFVNTVLNVVIASRVLEERLKTSRCAAFIGDDNIIHGVVSDKEMAE Sbjct 2324 FKFGAMMKSGMFLTLFVNTVLNVVIASRVLEERLKTSRCAAFIGDDNIIHGVVSDKEMAE 2383 Query 481 RCATWLNMEVKIIDAVIGERPPYFCGGFILQDSVTSTACRVADPLKRLFKLGKPLPadde 540 RCATWLNMEVKIIDAVIGERPPYFCGGFILQDSVTSTACRVADPLKRLFKLGKPLPADDE Sbjct 2384 RCATWLNMEVKIIDAVIGERPPYFCGGFILQDSVTSTACRVADPLKRLFKLGKPLPADDE 2443 Query 541 qdedrrralldeTKAWFRVGITGTLAVAVTTRYEVDNITPVLLALRTFAQSKRAFQAIRG 600 QDEDRRRALLDETKAWFRVGITGTLAVAVTTRYEVDNITPVLLALRTFAQSKRAFQAIRG Sbjct 2444 QDEDRRRALLDETKAWFRVGITGTLAVAVTTRYEVDNITPVLLALRTFAQSKRAFQAIRG 2503 Query 601 EIKHLYGGPK 610 EIKHLYGGPK Sbjct 2504 EIKHLYGGPK 2513 >RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Ockelbo virus] Sequence ID: P27283.2 Length: 2515 Range 1: 1906 to 2515 Score:1181 bits(3055), Expect:0.0, Method:Compositional matrix adjust., Identities:600/610(98%), Positives:605/610(99%), Gaps:0/610(0%) Query 1 YIFSTDTGPGHLQKKSVLQNQLTEPTLERNVLERIHAPVLDTSKEEQLKLRYQMMPTEAN 60 YIFSTDTGPGHLQ KSVLQNQLTEPTLERNVLERI+APVLDTSKEEQLKLRYQMMPTEAN Sbjct 1906 YIFSTDTGPGHLQMKSVLQNQLTEPTLERNVLERIYAPVLDTSKEEQLKLRYQMMPTEAN 1965 Query 61 KSRYQSRKVENQKAITTERLLSGLRLYNSATDQPECYKITYPKPLYSSSVPANYSDPQFA 120 KSRYQSRKVENQKAITTERLLSGLRLYNSATDQPECYKITYPKP YSSSV ANYSDP+FA Sbjct 1966 KSRYQSRKVENQKAITTERLLSGLRLYNSATDQPECYKITYPKPSYSSSVAANYSDPKFA 2025 Query 121 VAVCNNYLHENYPTVASYQITDEYDAYLDMVDGTVACLDTATFCPAKLRSYPKKHEYRAP 180 VAVCNNYLHENYPTVASYQITDEYDAYLDMVDGTVACLDTATFCPAKLRSYPK+HEYRAP Sbjct 2026 VAVCNNYLHENYPTVASYQITDEYDAYLDMVDGTVACLDTATFCPAKLRSYPKRHEYRAP 2085 Query 181 NIRSAVPSAMQNTLQNVLIAATKRNCNVTQMRELPTLDSATFNVECFRKYACNDEYWEEF 240 NIRSAVPSAMQNTLQNVLIAATKRNCNVTQMRELPTLDSATFNVECFRKYACNDEYWEEF Sbjct 2086 NIRSAVPSAMQNTLQNVLIAATKRNCNVTQMRELPTLDSATFNVECFRKYACNDEYWEEF 2145 Query 241 ARKPIRITTEFVTAYVARLKGPKAAALFAKTYNLVPLQEVPMDRFVMDMKRDVKVTPGTK 300 ARKPIRITTEFVTAYVARLKGPKAAALFAKT+NLVPLQEVPMDRFVMDMKRDVKVTPGTK Sbjct 2146 ARKPIRITTEFVTAYVARLKGPKAAALFAKTHNLVPLQEVPMDRFVMDMKRDVKVTPGTK 2205 Query 301 HTEERPKVQVIQAAEPLATAYLCGIHRELVRRLTAVLLPNIHTLFDMSAEDFDAIIAEHF 360 HTEERPKVQVIQAAEPLATAYLCGIHRELVRRLTAVLLPNIHTLFDMSAEDFDAIIAEHF Sbjct 2206 HTEERPKVQVIQAAEPLATAYLCGIHRELVRRLTAVLLPNIHTLFDMSAEDFDAIIAEHF 2265 Query 361 KQGDPVLETDIASFDKSQDDAMALTGLMILEDLGVDQPLLDLIECAFGEISSTHLPTGTR 420 KQGDPVLETDIASFDKSQDDAMALTGLMILEDLGVDQPLLDLIECAFGEISSTHLPTGTR Sbjct 2266 KQGDPVLETDIASFDKSQDDAMALTGLMILEDLGVDQPLLDLIECAFGEISSTHLPTGTR 2325 Query 421 FKFGAMMKSGMfltlfvntvlnvvIASRVLEERLKTSRCAAFIGDDNIIHGVVSDKEMAE 480 FKFGAMMKSGMFLTLFVNTVLNVVIASRVLEERLKTS+CAAFIGDDNIIHGVVSDKEMAE Sbjct 2326 FKFGAMMKSGMFLTLFVNTVLNVVIASRVLEERLKTSKCAAFIGDDNIIHGVVSDKEMAE 2385 Query 481 RCATWLNMEVKIIDAVIGERPPYFCGGFILQDSVTSTACRVADPLKRLFKLGKPLPadde 540 RCATWLNMEVKIIDAVIGERPPYFCGGFILQDSVTSTACRVADPLKRLFKLGKPLPADDE Sbjct 2386 RCATWLNMEVKIIDAVIGERPPYFCGGFILQDSVTSTACRVADPLKRLFKLGKPLPADDE 2445 Query 541 qdedrrralldeTKAWFRVGITGTLAVAVTTRYEVDNITPVLLALRTFAQSKRAFQAIRG 600 QDEDRRRALLDETKAWFRVGIT TLAVAV TRYEVDNITPVLLALRTFAQSKRAFQAIRG Sbjct 2446 QDEDRRRALLDETKAWFRVGITDTLAVAVATRYEVDNITPVLLALRTFAQSKRAFQAIRG 2505 Query 601 EIKHLYGGPK 610 EIKHLYGGPK Sbjct 2506 EIKHLYGGPK 2515 >RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Aura virus] Sequence ID: Q86924.3 Length: 2499 Range 1: 1890 to 2499 Score:966 bits(2496), Expect:0.0, Method:Compositional matrix adjust., Identities:489/610(80%), Positives:537/610(88%), Gaps:0/610(0%) Query 1 YIFSTDTGPGHLQKKSVLQNQLTEPTLERNVLERIHAPVLDTSKEEQLKLRYQMMPTEAN 60 YIFS+DTGPGHLQ+KSV+QN TE +ER+ LE+IHAPVLD KEE LK RYQM PT AN Sbjct 1890 YIFSSDTGPGHLQQKSVIQNSTTEILIERSRLEKIHAPVLDLQKEEMLKCRYQMSPTVAN 1949 Query 61 KSRYQSRKVENQKAITTERLLSGLRLYNSATDQPECYKITYPKPLYSSSVPANYSDPQFA 120 KSRYQSRKVEN KA+TT RLL GL++Y + + ECYK TYPKP+YS+SVP + P+ A Sbjct 1950 KSRYQSRKVENMKAVTTGRLLDGLKMYVTPDVEAECYKYTYPKPMYSASVPDRFVSPEVA 2009 Query 121 VAVCNNYLHENYPTVASYQITDEYDAYLDMVDGTVACLDTATFCPAKLRSYPKKHEYRAP 180 VAVCNN+ HENYPTVASYQITDEYDAYLDMV+G+V+CLDTATFCPAKLRS+PK H Y P Sbjct 2010 VAVCNNFFHENYPTVASYQITDEYDAYLDMVEGSVSCLDTATFCPAKLRSFPKTHSYLEP 2069 Query 181 NIRSAVPSAMQNTLQNVLIAATKRNCNVTQMRELPTLDSATFNVECFRKYACNDEYWEEF 240 +RSAVPSA QNTLQNVL AATKRNCNVTQMRELP LDSA FNVECF+KYACN +YWEEF Sbjct 2070 TLRSAVPSAFQNTLQNVLSAATKRNCNVTQMRELPVLDSAVFNVECFKKYACNTDYWEEF 2129 Query 241 ARKPIRITTEFVTAYVARLKGPKAAALFAKTYNLVPLQEVPMDRFVMDMKRDVKVTPGTK 300 KPIRITTE VT+YVARLKGP+AAALFAKT+ LVPLQEVPMDRFVMDMKRDVKVTPGTK Sbjct 2130 KEKPIRITTECVTSYVARLKGPEAAALFAKTHQLVPLQEVPMDRFVMDMKRDVKVTPGTK 2189 Query 301 HTEERPKVQVIQAAEPLATAYLCGIHRELVRRLTAVLLPNIHTLFDMSAEDFDAIIAEHF 360 HTEERPKVQVIQAAEPLATAYLCGIHRELVRRLTAVLLPNIHTLFDMSAEDFDAIIA +F Sbjct 2190 HTEERPKVQVIQAAEPLATAYLCGIHRELVRRLTAVLLPNIHTLFDMSAEDFDAIIAANF 2249 Query 361 KQGDPVLETDIASFDKSQDDAMALTGLMILEDLGVDQPLLDLIECAFGEISSTHLPTGTR 420 PVLETDI SFDKSQDD++ALT LMILEDLGVD L+DLIECAFGEI+S HLPT T Sbjct 2250 SYVHPVLETDIGSFDKSQDDSLALTALMILEDLGVDDRLMDLIECAFGEITSVHLPTATT 2309 Query 421 FKFGAMMKSGMfltlfvntvlnvvIASRVLEERLKTSRCAAFIGDDNIIHGVVSDKEMAE 480 FKFGAMMKSGMFLTLFVNTVLNVVIASRVLE+RL+ S+CAAFIGDDNIIHGVVSDK MA+ Sbjct 2310 FKFGAMMKSGMFLTLFVNTVLNVVIASRVLEQRLRDSKCAAFIGDDNIIHGVVSDKIMAD 2369 Query 481 RCATWLNMEVKIIDAVIGERPPYFCGGFILQDSVTSTACRVADPLKRLFKLGKPLPadde 540 RCATW+NMEVKIIDAVIG + PYFCGGFIL+D VT TACRV+DPLKRLFKLGKPLP DDE Sbjct 2370 RCATWMNMEVKIIDAVIGIKAPYFCGGFILEDQVTHTACRVSDPLKRLFKLGKPLPVDDE 2429 Query 541 qdedrrralldeTKAWFRVGITGTLAVAVTTRYEVDNITPVLLALRTFAQSKRAFQAIRG 600 QD DRRRAL DET+AWFRVGI G L AV +RYEV + PVLLAL TF++S +AF+A+RG Sbjct 2430 QDHDRRRALEDETRAWFRVGIQGELLKAVESRYEVQEVQPVLLALATFSRSDKAFKALRG 2489 Query 601 EIKHLYGGPK 610 +HLYGGPK Sbjct 2490 SPRHLYGGPK 2499 >RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Semliki Forest virus] Sequence ID: P08411.2 Length: 2432 Range 1: 1819 to 2429 Score:892 bits(2304), Expect:0.0, Method:Compositional matrix adjust., Identities:451/611(74%), Positives:513/611(83%), Gaps:1/611(0%) Query 1 YIFSTDTGPGHLQKKSVLQNQLTEPTLERNVLERIHAPVLDTSKEEQLKLRYQMMPTEAN 60 YIFS+DTG GHLQ+KSV Q+ L L+ E+++ P LDT +E+ L L+ QM P+EAN Sbjct 1819 YIFSSDTGSGHLQQKSVRQHNLQCAQLDAVEEEKMYPPKLDTEREKLLLLKMQMHPSEAN 1878 Query 61 KSRYQSRKVENQKAITTERLLSGLRLYNSA-TDQPECYKITYPKPLYSSSVPANYSDPQF 119 KSRYQSRKVEN KA +RL SG RLY A + Y + YP+P+YS +V +S P Sbjct 1879 KSRYQSRKVENMKATVVDRLTSGARLYTGADVGRIPTYAVRYPRPVYSPTVIERFSSPDV 1938 Query 120 AVAVCNNYLHENYPTVASYQITDEYDAYLDMVDGTVACLDTATFCPAKLRSYPKKHEYRA 179 A+A CN YL NYPTVASYQITDEYDAYLDMVDG+ +CLD ATFCPAKLR YPK H Y Sbjct 1939 AIAACNEYLSRNYPTVASYQITDEYDAYLDMVDGSDSCLDRATFCPAKLRCYPKHHAYHQ 1998 Query 180 PNIRSAVPSAMQNTLQNVLIAATKRNCNVTQMRELPTLDSATFNVECFRKYACNDEYWEE 239 P +RSAVPS QNTLQNVL AATKRNCNVTQMRELPT+DSA FNVECF++YAC+ EYWEE Sbjct 1999 PTVRSAVPSPFQNTLQNVLAAATKRNCNVTQMRELPTMDSAVFNVECFKRYACSGEYWEE 2058 Query 240 FARKPIRITTEFVTAYVARLKGPKAAALFAKTYNLVPLQEVPMDRFVMDMKRDVKVTPGT 299 +A++PIRITTE +T YV +LKGPKAAALFAKT+NLVPLQEVPMDRF +DMKRDVKVTPGT Sbjct 2059 YAKQPIRITTENITTYVTKLKGPKAAALFAKTHNLVPLQEVPMDRFTVDMKRDVKVTPGT 2118 Query 300 KHTEERPKVQVIQAAEPLATAYLCGIHRELVRRLTAVLLPNIHTLFDMSAEDFDAIIAEH 359 KHTEERPKVQVIQAAEPLATAYLCGIHRELVRRL AVL PN+HTLFDMSAEDFDAIIA H Sbjct 2119 KHTEERPKVQVIQAAEPLATAYLCGIHRELVRRLNAVLRPNVHTLFDMSAEDFDAIIASH 2178 Query 360 FKQGDPVLETDIASFDKSQDDAMALTGLMILEDLGVDQPLLDLIECAFGEISSTHLPTGT 419 F GDPVLETDIASFDKSQDD++ALTGLMILEDLGVDQ LLDLIE AFGEISS HLPTGT Sbjct 2179 FHPGDPVLETDIASFDKSQDDSLALTGLMILEDLGVDQYLLDLIEAAFGEISSCHLPTGT 2238 Query 420 RFKFGAMMKSGMfltlfvntvlnvvIASRVLEERLKTSRCAAFIGDDNIIHGVVSDKEMA 479 RFKFGAMMKSGMFLTLF+NTVLN+ IASRVLE+RL S CAAFIGDDNI+HGV+SDK MA Sbjct 2239 RFKFGAMMKSGMFLTLFINTVLNITIASRVLEQRLTDSACAAFIGDDNIVHGVISDKLMA 2298 Query 480 ERCATWLNMEVKIIDAVIGERPPYFCGGFILQDSVTSTACRVADPLKRLFKLGKPLPadd 539 ERCA+W+NMEVKIIDAV+GE+PPYFCGGFI+ DSVT TACRV+DPLKRLFKLGKPL A+D Sbjct 2299 ERCASWVNMEVKIIDAVMGEKPPYFCGGFIVFDSVTQTACRVSDPLKRLFKLGKPLTAED 2358 Query 540 eqdedrrralldeTKAWFRVGITGTLAVAVTTRYEVDNITPVLLALRTFAQSKRAFQAIR 599 +QDEDRRRAL DE WFR G+ L VA+T+RYEV+ +L+A+ T A+ +AF+ +R Sbjct 2359 KQDEDRRRALSDEVSKWFRTGLGAELEVALTSRYEVEGCKSILIAMATLARDIKAFKKLR 2418 Query 600 GEIKHLYGGPK 610 G + HLYGGP+ Sbjct 2419 GPVIHLYGGPR 2429 >RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Mayaro virus (strain Brazil)] Sequence ID: Q8QZ73.3 Length: 2437 Range 1: 1827 to 2437 Score:878 bits(2269), Expect:0.0, Method:Compositional matrix adjust., Identities:450/611(74%), Positives:506/611(82%), Gaps:1/611(0%) Query 1 YIFSTDTGPGHLQKKSVLQNQLTEPTLERNVLERIHAPVLDTSKEEQLKLRYQMMPTEAN 60 YIFS+D GPGHLQ+KSV Q+ L P ++R + E+++ P LD +KE+QL L+ QM T+AN Sbjct 1827 YIFSSDVGPGHLQQKSVRQHDLEVPIMDRVIEEKVYPPKLDEAKEKQLLLKLQMHATDAN 1886 Query 61 KSRYQSRKVENQKAITTERLLSGLRLY-NSATDQPECYKITYPKPLYSSSVPANYSDPQF 119 +SRYQSRKVEN KA +RL G Y ++A D+ Y + Y KP YS V S Sbjct 1887 RSRYQSRKVENMKATIIDRLKQGSAYYVSAAADKAVTYHVRYAKPRYSVPVMQRLSSATI 1946 Query 120 AVAVCNNYLHENYPTVASYQITDEYDAYLDMVDGTVACLDTATFCPAKLRSYPKKHEYRA 179 AVA CN +L NYPTVASYQITDEYDAYLDMVDG+ +CLD A FCPAKLR YPK H Y Sbjct 1947 AVATCNEFLARNYPTVASYQITDEYDAYLDMVDGSESCLDRANFCPAKLRCYPKHHAYHM 2006 Query 180 PNIRSAVPSAMQNTLQNVLIAATKRNCNVTQMRELPTLDSATFNVECFRKYACNDEYWEE 239 P IRSAVPS QNTLQNVL AATKRNCNVTQMRELPTLDSA +NVECFRKYACN+EYWEE Sbjct 2007 PQIRSAVPSPFQNTLQNVLAAATKRNCNVTQMRELPTLDSAVYNVECFRKYACNNEYWEE 2066 Query 240 FARKPIRITTEFVTAYVARLKGPKAAALFAKTYNLVPLQEVPMDRFVMDMKRDVKVTPGT 299 FA+KPIRITTE +T YV +LKG KAAALFAKT+NLVPLQEVPMDRF+MDMKRDVKVTPGT Sbjct 2067 FAKKPIRITTENLTTYVTKLKGGKAAALFAKTHNLVPLQEVPMDRFIMDMKRDVKVTPGT 2126 Query 300 KHTEERPKVQVIQAAEPLATAYLCGIHRELVRRLTAVLLPNIHTLFDMSAEDFDAIIAEH 359 KHTEERPKVQVIQAAEPLATAYLCGIHRELVRRL AVLLPNIHTLFDMSAEDFDAII+EH Sbjct 2127 KHTEERPKVQVIQAAEPLATAYLCGIHRELVRRLNAVLLPNIHTLFDMSAEDFDAIISEH 2186 Query 360 FKQGDPVLETDIASFDKSQDDAMALTGLMILEDLGVDQPLLDLIECAFGEISSTHLPTGT 419 FK GD VLETDIASFDKSQDD++ALTGLMILEDLGVD LLDLIE AFG+I+S HLPTGT Sbjct 2187 FKPGDHVLETDIASFDKSQDDSLALTGLMILEDLGVDNQLLDLIEAAFGQITSCHLPTGT 2246 Query 420 RFKFGAMMKSGMfltlfvntvlnvvIASRVLEERLKTSRCAAFIGDDNIIHGVVSDKEMA 479 RFKFGAMMKSGMFLTLF+NTVLN+ IASRVLE RL S CAAFIGDDN++HGVVSDK MA Sbjct 2247 RFKFGAMMKSGMFLTLFINTVLNITIASRVLEARLTNSACAAFIGDDNVVHGVVSDKLMA 2306 Query 480 ERCATWLNMEVKIIDAVIGERPPYFCGGFILQDSVTSTACRVADPLKRLFKLGKPLPadd 539 +RCATW+NMEVKIIDAV+ +PPYFCGGF++ D VT TACR+ADPLKRLFKLGKPLPADD Sbjct 2307 DRCATWVNMEVKIIDAVMCIKPPYFCGGFLVYDHVTRTACRIADPLKRLFKLGKPLPADD 2366 Query 540 eqdedrrralldeTKAWFRVGITGTLAVAVTTRYEVDNITPVLLALRTFAQSKRAFQAIR 599 QDEDRRRAL DE K W R G+ + VA+ +RY ++ +LLA+ TFA S + F A+R Sbjct 2367 CQDEDRRRALYDEVKKWSRSGLGSEIEVALASRYRLEGSYNLLLAMSTFAHSMKNFSALR 2426 Query 600 GEIKHLYGGPK 610 G + HLYGGPK Sbjct 2427 GPVIHLYGGPK 2437 >RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Getah virus] Sequence ID: Q5Y389.3 Length: 2467 Range 1: 1857 to 2467 Score:878 bits(2269), Expect:0.0, Method:Compositional matrix adjust., Identities:451/611(74%), Positives:510/611(83%), Gaps:1/611(0%) Query 1 YIFSTDTGPGHLQKKSVLQNQLTEPTLERNVLERIHAPVLDTSKEEQLKLRYQMMPTEAN 60 YIFS+DTGPGHLQ+KSV Q++L TL + ERI+ P D KE+ L+ + QM PTEAN Sbjct 1857 YIFSSDTGPGHLQQKSVRQHELPCETLYAHEDERIYPPAFDGEKEKVLQAKMQMAPTEAN 1916 Query 61 KSRYQSRKVENQKAITTERLLSGLRLY-NSATDQPECYKITYPKPLYSSSVPANYSDPQF 119 KSRYQSRKVEN KA+ ERL G +LY + TD+ Y YP+P+YS SV + SDP+ Sbjct 1917 KSRYQSRKVENMKALIVERLREGAKLYLHEQTDKVPTYTSKYPRPVYSPSVDDSLSDPEV 1976 Query 120 AVAVCNNYLHENYPTVASYQITDEYDAYLDMVDGTVACLDTATFCPAKLRSYPKKHEYRA 179 AVA CN++L ENYPTVA+YQITDEYDAYLD+VDG+ +CLD ATFCPAKLR YPK H Y Sbjct 1977 AVAACNSFLEENYPTVANYQITDEYDAYLDLVDGSESCLDRATFCPAKLRCYPKHHAYHQ 2036 Query 180 PNIRSAVPSAMQNTLQNVLIAATKRNCNVTQMRELPTLDSATFNVECFRKYACNDEYWEE 239 P IRSAVPS QNTLQNVL AATKRNCNVTQMRELPT+DSA FNVE F+KYAC EYW+E Sbjct 2037 PQIRSAVPSPFQNTLQNVLAAATKRNCNVTQMRELPTMDSAVFNVESFKKYACTGEYWQE 2096 Query 240 FARKPIRITTEFVTAYVARLKGPKAAALFAKTYNLVPLQEVPMDRFVMDMKRDVKVTPGT 299 F PIRITTE +T YVA+LKGPKAAALFAKT+NLVPLQEVPMDRFVMDMKRDVKVTPGT Sbjct 2097 FKDNPIRITTENITTYVAKLKGPKAAALFAKTHNLVPLQEVPMDRFVMDMKRDVKVTPGT 2156 Query 300 KHTEERPKVQVIQAAEPLATAYLCGIHRELVRRLTAVLLPNIHTLFDMSAEDFDAIIAEH 359 KHTEERPKVQVIQAAEPLATAYLCGIHRELVRRL AVL PNIHTLFDMSAEDFDAIIA H Sbjct 2157 KHTEERPKVQVIQAAEPLATAYLCGIHRELVRRLKAVLTPNIHTLFDMSAEDFDAIIAAH 2216 Query 360 FKQGDPVLETDIASFDKSQDDAMALTGLMILEDLGVDQPLLDLIECAFGEISSTHLPTGT 419 F+ GD VLETDIASFDKSQDD++ALT LM+LEDLGVDQ LLDLIE AFGEI+S HLPTGT Sbjct 2217 FQPGDAVLETDIASFDKSQDDSLALTALMLLEDLGVDQELLDLIEAAFGEITSVHLPTGT 2276 Query 420 RFKFGAMMKSGMfltlfvntvlnvvIASRVLEERLKTSRCAAFIGDDNIIHGVVSDKEMA 479 RFKFGAMMKSGMFLTLF+NT+LN+VIA RVL ++L +S CAAFIGDDNI+HGV SD MA Sbjct 2277 RFKFGAMMKSGMFLTLFINTLLNIVIACRVLRDKLSSSACAAFIGDDNIVHGVRSDPLMA 2336 Query 480 ERCATWLNMEVKIIDAVIGERPPYFCGGFILQDSVTSTACRVADPLKRLFKLGKPLPadd 539 ERCA+W+NMEVKIIDA + E+PPYFCGGFIL DSV TACRVADPLKRLFKLGKPLPADD Sbjct 2337 ERCASWVNMEVKIIDATMCEKPPYFCGGFILYDSVAGTACRVADPLKRLFKLGKPLPADD 2396 Query 540 eqdedrrralldeTKAWFRVGITGTLAVAVTTRYEVDNITPVLLALRTFAQSKRAFQAIR 599 QDEDRRRAL DET W R+G+ L VA+++RY+V + + A+ T ++S ++F+ IR Sbjct 2397 NQDEDRRRALKDETVKWSRIGLREELDVALSSRYQVSGVGNITRAMSTLSKSLKSFRKIR 2456 Query 600 GEIKHLYGGPK 610 G I HLYGGPK Sbjct 2457 GPIIHLYGGPK 2467 >RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Sagiyama virus] Sequence ID: Q9JGL0.3 Length: 2467 Range 1: 1857 to 2467 Score:874 bits(2257), Expect:0.0, Method:Compositional matrix adjust., Identities:448/611(73%), Positives:510/611(83%), Gaps:1/611(0%) Query 1 YIFSTDTGPGHLQKKSVLQNQLTEPTLERNVLERIHAPVLDTSKEEQLKLRYQMMPTEAN 60 YIFS+DTGPGHLQ++SV Q++L TL + ERI+ P D KE+ L+ + QM PTEAN Sbjct 1857 YIFSSDTGPGHLQQRSVRQHELPCETLYAHEDERIYPPAFDGEKEKILQAKMQMAPTEAN 1916 Query 61 KSRYQSRKVENQKAITTERLLSGLRLY-NSATDQPECYKITYPKPLYSSSVPANYSDPQF 119 KSRYQSRKVEN KA+ ERL G +LY + TD+ Y YP+P+YS SV + S+P+ Sbjct 1917 KSRYQSRKVENMKALIVERLREGAKLYLHEQTDKVPTYTSKYPRPVYSPSVDDSLSNPEV 1976 Query 120 AVAVCNNYLHENYPTVASYQITDEYDAYLDMVDGTVACLDTATFCPAKLRSYPKKHEYRA 179 AVA CN++L ENYPTVA+YQITDEYDAYLD+VDG+ +CLD ATFCPAKLR YPK H Y Sbjct 1977 AVAACNSFLEENYPTVANYQITDEYDAYLDLVDGSESCLDRATFCPAKLRCYPKHHAYHQ 2036 Query 180 PNIRSAVPSAMQNTLQNVLIAATKRNCNVTQMRELPTLDSATFNVECFRKYACNDEYWEE 239 P IRSAVPS QNTLQNVL AATKRNCNVTQMRELPT+DSA FNVE F+KYAC EYW+E Sbjct 2037 PQIRSAVPSPFQNTLQNVLAAATKRNCNVTQMRELPTMDSAVFNVESFKKYACTGEYWQE 2096 Query 240 FARKPIRITTEFVTAYVARLKGPKAAALFAKTYNLVPLQEVPMDRFVMDMKRDVKVTPGT 299 F PIRITTE +T YVA+LKGPKAAALFAKT+NLVPLQEVPMDRFVMDMKRDVKVTPGT Sbjct 2097 FKDNPIRITTENITTYVAKLKGPKAAALFAKTHNLVPLQEVPMDRFVMDMKRDVKVTPGT 2156 Query 300 KHTEERPKVQVIQAAEPLATAYLCGIHRELVRRLTAVLLPNIHTLFDMSAEDFDAIIAEH 359 KHTEERPKVQVIQAAEPLATAYLCGIHRELVRRL AVL PNIHTLFDMSAEDFDAIIA H Sbjct 2157 KHTEERPKVQVIQAAEPLATAYLCGIHRELVRRLKAVLTPNIHTLFDMSAEDFDAIIAAH 2216 Query 360 FKQGDPVLETDIASFDKSQDDAMALTGLMILEDLGVDQPLLDLIECAFGEISSTHLPTGT 419 F+ GD VLETDIASFDKSQDD++ALT LM+LEDLGVDQ LLDLIE AFGEI+S HLPTGT Sbjct 2217 FQPGDAVLETDIASFDKSQDDSLALTALMLLEDLGVDQELLDLIEAAFGEITSVHLPTGT 2276 Query 420 RFKFGAMMKSGMfltlfvntvlnvvIASRVLEERLKTSRCAAFIGDDNIIHGVVSDKEMA 479 RFKFGAMMKSGMFLTLF+NT+LN+VIA RVL ++L +S CAAFIGDDNI+HGV SD MA Sbjct 2277 RFKFGAMMKSGMFLTLFINTLLNIVIACRVLRDKLSSSACAAFIGDDNIVHGVRSDPLMA 2336 Query 480 ERCATWLNMEVKIIDAVIGERPPYFCGGFILQDSVTSTACRVADPLKRLFKLGKPLPadd 539 ERCA+W+NMEVKIIDA + E+PPYFCGGFIL DSV TACRVADPLKRLFKLGKPLPADD Sbjct 2337 ERCASWVNMEVKIIDATMCEKPPYFCGGFILYDSVAGTACRVADPLKRLFKLGKPLPADD 2396 Query 540 eqdedrrralldeTKAWFRVGITGTLAVAVTTRYEVDNITPVLLALRTFAQSKRAFQAIR 599 QDEDRRRAL DET W R+G+ L VA+++RY+V + + A+ T +++ ++F+ IR Sbjct 2397 NQDEDRRRALKDETVKWSRIGLREELDVALSSRYQVSGVGNITRAMSTLSKNLKSFRKIR 2456 Query 600 GEIKHLYGGPK 610 G I HLYGGPK Sbjct 2457 GPIIHLYGGPK 2467 >RecName: Full=Polyprotein nsP1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Middelburg virus] Sequence ID: P03318.2 Length: 995 Range 1: 386 to 995 Score:873 bits(2256), Expect:0.0, Method:Compositional matrix adjust., Identities:449/612(73%), Positives:511/612(83%), Gaps:4/612(0%) Query 1 YIFSTDTGPGHLQKKSVLQNQLTEPTLERNVLERIHAPVLDTSKEEQLKLRYQMMPTEAN 60 YIFS+DTGPGHLQ++SV Q +L + E ER+ AP D KE L L+ QM PTEAN Sbjct 386 YIFSSDTGPGHLQQRSVRQTRLADCVAEDVHEERVFAPKCDKEKERLLLLQMQMAPTEAN 445 Query 61 KSRYQSRKVENQKAITTERLLSGLRLYNSATDQPECYKITY--PKPLYSSSVPANYSDPQ 118 KSRYQSRKVEN KA +RLL G +L+ + T +C +T+ PKP+YS+SV S + Sbjct 446 KSRYQSRKVENMKAEVIDRLLGGAKLFVTPTT--DCRYVTHKHPKPMYSTSVAFYLSSAK 503 Query 119 FAVAVCNNYLHENYPTVASYQITDEYDAYLDMVDGTVACLDTATFCPAKLRSYPKKHEYR 178 AVA CN +L NYPTV SYQITDEYDAYLDMVDG+ +CLD A FCP+KLRS+PKKH Y Sbjct 504 TAVAACNEFLSRNYPTVTSYQITDEYDAYLDMVDGSESCLDRAAFCPSKLRSFPKKHSYH 563 Query 179 APNIRSAVPSAMQNTLQNVLIAATKRNCNVTQMRELPTLDSATFNVECFRKYACNDEYWE 238 IRSAVPS QNTLQNVL AATKRNCNVTQMRELPTLDSA FNVECF+KYACN++YW+ Sbjct 564 RAEIRSAVPSPFQNTLQNVLAAATKRNCNVTQMRELPTLDSAVFNVECFKKYACNNDYWD 623 Query 239 EFARKPIRITTEFVTAYVARLKGPKAAALFAKTYNLVPLQEVPMDRFVMDMKRDVKVTPG 298 EFA+KPIR+TTE +T+YV RLKGPKAAALFAKTY+L PLQEVPMDRFV+DMKRDVKVTPG Sbjct 624 EFAQKPIRLTTENITSYVTRLKGPKAAALFAKTYDLKPLQEVPMDRFVVDMKRDVKVTPG 683 Query 299 TKHTEERPKVQVIQAAEPLATAYLCGIHRELVRRLTAVLLPNIHTLFDMSAEDFDAIIAE 358 TKHTEERPKVQVIQAAEPLATAYLCGIHRELVRRL AVLLPN+HTLFDMSAEDFDAII+E Sbjct 684 TKHTEERPKVQVIQAAEPLATAYLCGIHRELVRRLNAVLLPNVHTLFDMSAEDFDAIISE 743 Query 359 HFKQGDPVLETDIASFDKSQDDAMALTGLMILEDLGVDQPLLDLIECAFGEISSTHLPTG 418 HF+ GD VLETDIASFDKSQDD++A TGLM+LEDLGVDQPLL+LIE +FGEI+STHLPTG Sbjct 744 HFRPGDAVLETDIASFDKSQDDSLAYTGLMLLEDLGVDQPLLELIEASFGEITSTHLPTG 803 Query 419 TRFKFGAMMKSGMfltlfvntvlnvvIASRVLEERLKTSRCAAFIGDDNIIHGVVSDKEM 478 TRFKFGAMMKSGMFLTLFVNT+LN+ IASRVLEERL S+CAAFIGDDNI+HGV SDK + Sbjct 804 TRFKFGAMMKSGMFLTLFVNTMLNMTIASRVLEERLTNSKCAAFIGDDNIVHGVKSDKLL 863 Query 479 AERCATWLNMEVKIIDAVIGERPPYFCGGFILQDSVTSTACRVADPLKRLFKLGKPLPad 538 AERCA W+NMEVKIIDAV+ ERPPYFCGGFI+ D VT T CRVADPLKRLFKLGKPLPA+ Sbjct 864 AERCAAWMNMEVKIIDAVMCERPPYFCGGFIVFDQVTGTCCRVADPLKRLFKLGKPLPAE 923 Query 539 deqdedrrralldeTKAWFRVGITGTLAVAVTTRYEVDNITPVLLALRTFAQSKRAFQAI 598 D+QDEDRRRAL DE + W RVGI L A+ +RYEV+ I V+ AL T +++ F+ + Sbjct 924 DKQDEDRRRALADEAQRWNRVGIQADLEAAMNSRYEVEGIRNVITALTTLSRNYHNFRHL 983 Query 599 RGEIKHLYGGPK 610 RG + LYGGPK Sbjct 984 RGPVIDLYGGPK 995