#1
seqret '/P/y21/term3/pr9/to_join/*.fasta' first.fasta
#2
seqretsplit -sequence '/P/y21/term3/pr9/to_split/coding1.fasta' -auto
#4
transeq '/P/y21/term3/pr9/coding.fasta' fourth.fasta -frame 1 -table 0
#5
getorf '/P/y21/term3/pr9/coding.fasta' fifth.orf  -minsize 33 -table 1
#6
seqret '/P/y21/term3/pr9/alignment.fasta' -outseq msf::sixth.msf