MEGABLAST 2.2.15 [Oct-15-2006]


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), 
"A greedy algorithm for aligning DNA sequences", 
J Comput Biol 2000; 7(1-2):203-14.

Database: bs 
           21 sequences; 4,215,470 total letters

Searching..................................................done

Query= U00096 U00096.2 Escherichia coli K12 MG1655, complete genome.
         (184 letters)

 ***** No hits found ******


  Database: bs
    Posted date:  Oct 31, 2007  1:27 PM
  Number of letters in database: 4,215,470
  Number of sequences in database:  21
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 0, Extension: 0
Number of Sequences: 21
Number of Hits to DB: 1309
Number of sequences better than 10.0: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 184
Length of database: 4,215,470
Length adjustment: 15
Effective length of query: 169
Effective length of database: 4,215,155
Effective search space: 712361195
Effective search space used: 712361195
X1: 11 (21.8 bits)
X2: 20 (39.6 bits)
X3: 51 (101.1 bits)
S1: 13 (26.3 bits)
S2: 13 (26.3 bits)