TBLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: X5.fasta 1,868 sequences; 23,962,143 total letters Query= sp|P15436|DPOD_YEAST DNA polymerase delta catalytic subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=POL3 PE=1 SV=4 Length=1097 Score E Sequences producing significant alignments: (Bits) Value scaffold-359 1049 0.0 scaffold-81 1037 0.0 unplaced-816 181 6e-46 scaffold-423 154 1e-37 scaffold-424 145 6e-35 scaffold-17 40.8 0.004 scaffold-105 38.5 0.022 scaffold-22 33.5 0.69 > scaffold-359 Length=583372 Score = 1049 bits (2712), Expect = 0.0, Method: Compositional matrix adjust. Identities = 531/954 (56%), Positives = 693/954 (73%), Gaps = 24/954 (3%) Frame = +3 Query 145 EGHSVLCNVTGFKNYLYVPAPNSSDANDQEQINKFVHYLNETFD----HAIDSIEVVSKQ 200 +G+SVLC+V GF Y YVPAP + +++ + +F LN+ + A+ +E++ K+ Sbjct 102894 DGNSVLCHVHGFFPYFYVPAPPNFNSS---HLMEFTRSLNQNVEGAGGKAVLLVELMKKK 103064 Query 201 SIWGYSGDTKLPFWKIYVTYPHMVNKLRTAFERGHLSFNSWFSNGTTT---YDNIAYTLR 257 +I+GY G F KI V+ P +++K R E G F F + T NIAY LR Sbjct 103065 TIYGYYG*EDSTFLKITVSSPKLISKARGILESGAFHFPG-FPHAVTLPGFESNIAYELR 103241 Query 258 LMVDCGIVGMSWITLPKGKYSMIEPNNRVSSCQLEVSINYRNLIAHPAEGDWSHTAPLRI 317 M+DC IVG +WI LP GK+ + + S +EV + Y +LI+H EG+WS APLRI Sbjct 103242 FMIDCKIVGANWIELPAGKWCVRTGKDHTSHA*IEVDVFYEDLISHAPEGEWSKVAPLRI 103421 Query 318 MSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKPFIRNVFTLNTCSPITGSMIFSHA 377 +SFDIECAGR GVFP+P++D VIQIAN+V+I G KP IRN+FTL C I GS I S+ Sbjct 103422 LSFDIECAGRKGVFPDPQHDSVIQIANMVTIQG*SKPLIRNIFTLKECGHIVGSHILSYE 103601 Query 378 TEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVND-FPYFGRLKTVKQEI 436 E ++L W +FI +VDPD++ GYN NFD+PYL++RAKALK D F GR++ +I Sbjct 103602 DEAQLL*KWSDFIKEVDPDIVTGYNINNFDMPYLVDRAKALKCKDSFFNLGRIRGKLSQI 103781 Query 437 KESVFSSKAYGTRETKNVNIDGRLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHY 496 K++ FSSKAYG RE + V ++GR+ LD++ IQR++KLRSY+LN+VSAHFLGE KEDV + Sbjct 103782 KDTRFSSKAYGNREGREVALEGRVILDMI*IIQRDHKLRSYSLNSVSAHFLGE*KEDVPH 103961 Query 497 SIISDLQNGDSETRRRLAVYCLKDAYLPLRLMEKLMALVNYTEMARVTGVPFSYLLARGQ 556 SII+DLQNGD+ TRRRLAVYCLKDAYLP RL++KLM ++NY EMARVTGVP +YLL+RG Sbjct 103962 SIITDLQNGDA*TRRRLAVYCLKDAYLP*RLLDKLMVVINYMEMARVTGVPLNYLLSRG* 104141 Query 557 QIKVVSQLFRKCLEIDTVIPNMQSQASDDQYEGATVIEPIRGYYDVPIATLDFNSLYPSI 616 IKVVS L+RK E + VIP M+S+ SD+ YEGATVIEP R +Y PIATLDF+SLYPSI Sbjct 104142 *IKVVS*LYRKAKEENLVIPAMKSEGSDE*YEGATVIEPKRAFYKDPIATLDFSSLYPSI 104321 Query 617 MMAHNLCYTTLC-NKATVERLNLKIDEDYVITPNGDYFVTTKRRRGILPIILDELISARK 675 MMAHNLCY+TL N ++ L L D DY++TP+GD FV + R+GILP IL++LI ARK Sbjct 104322 MMAHNLCYSTLVMNNQVIDALKLVKD*DYIVTPSGDKFVKSTVRKGILPTILEDLIGARK 104501 Query 676 RAKKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVTAYGRTMI 735 RAK DL+ E DPFKR VL+GRQLALKISANSVYGFTGATVGKLPCL +S SVTAYGR MI Sbjct 104502 RAKADLKKETDPFKRAVLDGRQLALKISANSVYGFTGATVGKLPCLQVS*SVTAYGREMI 104681 Query 736 LKTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMVKFGTTDLKEAMDLGTEAAKYVSTLFKH 795 TK V++++C NGYKHDA VVYGDTDSVMVKFGT DLKEAMDLG EAA++++ F Sbjct 104682 DFTKDLVEKQFCKANGYKHDADVVYGDTDSVMVKFGTEDLKEAMDLGREAAEFITQRFVK 104861 Query 796 PINLEFEKAYFPYLLINKKRYAGLFWTNPDKFDKLDQKGLASVRRDSCSLVSIVMNKVLK 855 PI LEFEK Y+PYLLINKKRYAGL+WT+ +K DK+D KGL +VRRD+C LVS V++ LK Sbjct 104862 PIKLEFEKVYWPYLLINKKRYAGLYWTSVEKPDKMDTKGLETVRRDNCKLVSTVVDTCLK 105041 Query 856 KILIERNVDGALAFVRETINDILHNRVDISKLIISKTLAP---NYTNPQPHAVLAERMKR 912 IL+E++V+ A+ +V+ TI+++L N+VD+S L+I+K L+ +Y H LAERM++ Sbjct 105042 MILMEKDVEKAVNYVKSTISELLQNKVDLSLLVITKQLSKSGEDYAGK*AHVELAERMRK 105221 Query 913 RE-GVGPNVGDRVDYVII--GGNDKLYNRAEDPLFVLENNIQVDSRYYLTNQLQNPIISI 969 R+ G P +GDRV YVII Y RAEDP++VLENNI +D++YYL NQL+NP++ I Sbjct 105222 RDAGSAPALGDRVAYVIIKAAKGSAAYERAEDPIYVLENNIPIDTKYYLDNQLKNPLMRI 105401 Query 970 VAPIIGDKQANGMFV---VKSIKINTGSQKGGLMSFIKKVEACKSCKGPLRKGEGPLCSN 1026 PI+ + ++ +F +SI++ T S GGLM F K C CK L+ +C + Sbjct 105402 FEPILPNAESQ-LFSGEHTRSIQV-TSSSAGGLMKFTVKKMTCLGCKAVLKD*NAAVCQH 105575 Query 1027 CLARSGELYIKALYDVRDLEEKYSRLWTQCQRCAGNLHSEVLCSNKNCDIFYMR 1080 CL + +LY+K L +V +LE ++SRLWTQCQRC G+LH +VLC++K+C IFYMR Sbjct 105576 CLPKINQLYMKQLDNVNELENRFSRLWTQCQRCQGSLHQDVLCTSKDCPIFYMR 105737 > scaffold-81 Length=367914 Score = 1037 bits (2682), Expect = 0.0, Method: Compositional matrix adjust. Identities = 532/954 (56%), Positives = 689/954 (72%), Gaps = 24/954 (3%) Frame = -2 Query 145 EGHSVLCNVTGFKNYLYVPAPNSSDANDQEQINKFVHYLNETFD----HAIDSIEVVSKQ 200 +G+SVLC+V GF Y YVPAP + +++ + +F LN + A+ +E++ K+ Sbjct 343361 DGNSVLCHVHGFFPYFYVPAPPNFNSS---HLMEFTCSLN*NVESAGGKAVLLVELMKKK 343191 Query 201 SIWGYSGDTKLPFWKIYVTYPHMVNKLRTAFERGHLSFNSWFSNGTTT---YDNIAYTLR 257 +I+GY G F KI V+ P ++K R E G F F + T NIAY LR Sbjct 343190 TIYGYYG*DDSTFLKITVSSPKFISKARGILESGAFHFPG-FPHAVTLPGFESNIAYELR 343014 Query 258 LMVDCGIVGMSWITLPKGKYSMIEPNNRVSSCQLEVSINYRNLIAHPAEGDWSHTAPLRI 317 M+DC IVG +WI LP GK+ + + S +EV + Y +LI+H EG+WS APLRI Sbjct 343013 FMIDCKIVGANWIELPAGKWCVRTGKDHTSHA*IEVDVFYEDLISHAPEGEWSKVAPLRI 342834 Query 318 MSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKPFIRNVFTLNTCSPITGSMIFSHA 377 +SFDIECAGR GVFP+P +D VIQIAN+V+I G KP IRN+FTL C I GS I S+ Sbjct 342833 LSFDIECAGRKGVFPDP*HDSVIQIANMVTIQG*NKPLIRNIFTLKECGHIVGSHILSYE 342654 Query 378 TEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVND-FPYFGRLKTVKQEI 436 E +L W +FI +VDPD++ GYN NFD+PYL++RAKALK D F GR++ I Sbjct 342653 DEALLL*KWSDFIKEVDPDIVTGYNINNFDMPYLVDRAKALKCKDSFFNLGRIRGKMS*I 342474 Query 437 KESVFSSKAYGTRETKNVNIDGRLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHY 496 K++ FSSKAYG RE + V ++GR+ LD++ IQR++KLRSY+LN+VSAHFLGE KEDV + Sbjct 342473 KDTRFSSKAYGNREGREVALEGRVILDMI*IIQRDHKLRSYSLNSVSAHFLGE*KEDVPH 342294 Query 497 SIISDLQNGDSETRRRLAVYCLKDAYLPLRLMEKLMALVNYTEMARVTGVPFSYLLARGQ 556 SII+DLQNGD+ TRRRLAVYCLKDAYLP RL++KLM ++NY EMARVTGVP +YLL+RGQ Sbjct 342293 SIITDLQNGDA*TRRRLAVYCLKDAYLP*RLLDKLMVVINYMEMARVTGVPLNYLLSRGQ 342114 Query 557 QIKVVSQLFRKCLEIDTVIPNMQSQASDDQYEGATVIEPIRGYYDVPIATLDFNSLYPSI 616 IKVVS L+RK E + VIP M+S+ SD+ YEGATVIEP R +Y PIATLDF+SLYPSI Sbjct 342113 *IKVVS*LYRKAKEENLVIPAMKSEGSDE*YEGATVIEPKRAFYKDPIATLDFSSLYPSI 341934 Query 617 MMAHNLCYTTLC-NKATVERLNLKIDEDYVITPNGDYFVTTKRRRGILPIILDELISARK 675 MMAHNLCY+TL N ++ L L D+DY++TP+GD FV + R+GILP IL++LI ARK Sbjct 341933 MMAHNLCYSTLVMNNQVIDTLKLVKDKDYIVTPSGDKFVKSTVRKGILPTILEDLIGARK 341754 Query 676 RAKKDLRDEKDPFKRDVLNGRQLALKISANSVYGFTGATVGKLPCLAISSSVTAYGRTMI 735 RAK DL+ E DPFKR VL+GRQLALKISANSVYGFTGATVGKLPCL +S SVTAYGR MI Sbjct 341753 RAKADLKKETDPFKRAVLDGRQLALKISANSVYGFTGATVGKLPCLQVS*SVTAYGREMI 341574 Query 736 LKTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMVKFGTTDLKEAMDLGTEAAKYVSTLFKH 795 TK V++++C NGYKHDA VVYGDTDSVMVKFGT DLKEAMDLG EAA++++ F Sbjct 341573 DFTKDLVEKQFCKANGYKHDADVVYGDTDSVMVKFGTEDLKEAMDLGREAAEFIT*RFVK 341394 Query 796 PINLEFEKAYFPYLLINKKRYAGLFWTNPDKFDKLDQKGLASVRRDSCSLVSIVMNKVLK 855 PI LEFEK Y+PYLLINKKRYAGL+WT+ DK DK+D KGL +VRRD+C LVS V++ LK Sbjct 341393 PIKLEFEKVYWPYLLINKKRYAGLYWTSVDKPDKMDTKGLETVRRDNCKLVSTVVDTCLK 341214 Query 856 KILIERNVDGALAFVRETINDILHNRVDISKLIISKTLAP---NYTNPQPHAVLAERMKR 912 IL+E++V+ A+ +V+ TI+++L N+VD+S+L+I+K L+ +Y H LAERM++ Sbjct 341213 MILMEKDVEKAVNYVKNTISELLQNKVDLSQLVITKQLSKSGEDYAGK*AHVELAERMRK 341034 Query 913 RE-GVGPNVGDRVDYVII--GGNDKLYNRAEDPLFVLENNIQVDSRYYLTNQLQNPIISI 969 R+ G P +GDRV YVII Y RAEDP++VLENNI +D++YYL NQL+NP++ I Sbjct 341033 RDAGSAPALGDRVAYVIIKAAKGSAAYERAEDPIYVLENNIPIDTKYYLDNQLKNPLMRI 340854 Query 970 VAPIIGDKQANGMFV---VKSIKINTGSQKGGLMSFIKKVEACKSCKGPLRKGEGPLCSN 1026 PI+ + ++ +F +SI++ T S GGLM F K C CK L+ +C + Sbjct 340853 FEPILPNAESQ-LFSGEHTRSIQV-TSSSAGGLMKFTVKKMTCLGCKAVLKN*NAAVCQH 340680 Query 1027 CLARSGELYIKALYDVRDLEEKYSRLWTQCQRCAGNLHSEVLCSNKNCDIFYMR 1080 CL + LY+K L +V +LE ++SRLWTQC RC G+LH +VLC++K+C IFYMR Sbjct 340679 CLPKIN*LYMKQLDNVNELENRFSRLWTQC*RCQGSLHQDVLCTSKDCPIFYMR 340518 > unplaced-816 Length=48226 Score = 181 bits (459), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 163/622 (26%), Positives = 276/622 (44%), Gaps = 73/622 (12%) Frame = +2 Query 367 PITGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYF 426 P+T ++ A E +M++ + DP++I+GY Y RA + D Sbjct 25652 PLTEHILILVADELQMINCLIQLVRDYDPEIILGYEIHMASWGYAAERAYSQYKIDL--- 25822 Query 427 GRLKTVKQEIKESVFSSKAYGTRETKNVN-----------------------IDGRLQLD 463 K + + + +++ +G + N + GR+ L+ Sbjct 25823 --CKMISRSFADHRINTRGHGGVNSDENNGQHNEGLNMKANEWGY*KASGLKVTGRIVLN 25996 Query 464 LLQFIQREYKLRSYTLNAVSAHFLGEQKEDVH-YSIISDLQNGDSETRRRLAVYCLKDAY 522 + + E L SYT + H L + +S+ D R R+ Y + Sbjct 25997 AWRLFRAEMALTSYTYQTMMYHVLHRRVPKFSPFSLSRWYWGRDGLDRYRVV*YYSDMSL 26176 Query 523 LPLRLMEKLMALVNYTEMARVTGVPFSYLLARGQQIKVVSQLFR--KCLEIDTVIPNM-Q 579 L+++++ L+ E A+V GV F +++RG Q KV S + R K + P+ Q Sbjct 26177 NTLKMLDECNILIRTAEFAKVFGV*FYAVISRGSQFKVESMMARIAKPENYLLISPSR*Q 26356 Query 580 SQASDDQYEGATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNLK 639 + V+EP +Y P+ LDF SLYPSIM+A+N C++T K T + L+ Sbjct 26357 VR*MRALECLPLVMEPESAFYKSPLVVLDF*SLYPSIMIAYNYCFSTCLGKFTPQHLDTL 26536 Query 640 IDEDYVI-----------------------TPNGDYFVTTKRRRGILPIILDELISARKR 676 DY + +PNG F+ +R GIL +L E++ R Sbjct 26537 GFADYKVDSL*LR*INSVESEQGFA*QLNASPNGVAFLKATQRDGILKKMLSEVLDTRIM 26716 Query 677 AKKDLR--DEKDPFKRDVLNGRQLALKISANSVYGFTGATV-GKLPCLAISSSVTAYGRT 733 K ++ + R +L+ R L LK AN YG+T A+ G++PC+ +S S+ GR Sbjct 26717 IKDSMKLYKNRKALTR-ILDAR*LGLKYIANVTYGYTSASFSGRMPCVDVSDSIV*MGRE 26893 Query 734 MILKTKTAVQEKYCIKNGYKHDAVVVYGDTDSVMVKFGTTDLKEAMDLGTEAAKYVSTLF 793 + + V E + +A VVY DTDS+ + + + A +G E A ++ Sbjct 26894 TLERAIR*VNEH------PQWNARVVYADTDSMFIYMDGSSRERAFSVGREIADTITRQN 27055 Query 794 KHPINLEFEKAYFPYLLINKKRYAGLFWTNPDKFD-KLDQKGLASVRRDSCSLVSIVMNK 852 +P+ L+FEK Y P +L++KKRY G + + + + D KG+ +VRRD C V+ +M Sbjct 27056 PYPMKLKFEKVYHPSVLLSKKRYVGWKFESEQSVEGEFDAKGIETVRRDGCPAVAKIMES 27235 Query 853 VLKKILIERNVDGALAFVRETINDILHNRVDISKLIISK-----TLAPNYTNPQPHAVLA 907 LK + +++ ++ I RV + +I+K T + N P P AVL+ Sbjct 27236 SLKILFRSQDMSELKRYL*MQW*KI*SGRVSL*DFVIAKEVKLGTYSENGIGP-PGAVLS 27412 Query 908 -ERMKRREGVGPNVGDRVDYVI 928 ++M R P G+RV Y++ Sbjct 27413 VDKMARDRRDEPQYGERVPYLV 27478 > scaffold-423 Length=1446679 Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 173/647 (27%), Positives = 284/647 (44%), Gaps = 91/647 (14%) Frame = -3 Query 392 KVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEIKESVFSSKAYGTRET 451 K+D D+ +G+N + F + +++ K + GRL+ + SS+ ++ Sbjct 581612 KIDHDMYVGHNLSGFGLDVVVSALKRFNTTGWSKLGRLRRSNWP---RLNSSQNDSSKNI 581442 Query 452 KNVNIDGRLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISDLQNGDSETRR 511 K V I GRL D + K SY+L ++ LG ++ ++ + N ++ Sbjct 581441 KEV-ISGRLMCDTFWLGKSYIKSNSYSLGVLAKSVLGMERPELDVEQVPQFYNT-AKDLL 581268 Query 512 RLAVYCLKDAYLPLRLMEKLMALVNYTEMARVTG-------------------------- 545 L + DA+L ++L+ ++M + + + G Sbjct 581267 WLVKHNENDAFLAMQLVFRIMLIPLTK*LTNLAGNLW*KTLTTGRSDCNEYLLLHEFTNR 581088 Query 546 ---VPFSYLL--ARGQQIKVVSQLFRKCLEIDTVIPNMQSQAS--------DDQYEGATV 592 VP Y + A + +SQ +K ++ +V QA QY G V Sbjct 581087 GYIVPDKYWMEDASRKNNGKLSQDGKK*NKMSSVYDVDADQAD*GDKKGRKKPQYLGGLV 580908 Query 593 IEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNLKIDEDYVITPNGD- 651 +EP +G Y + LDFNSLYPSI+ N+C+T TVER D + GD Sbjct 580907 LEPKKGLYQNYVLLLDFNSLYPSIIQEFNICFT------TVER------SDQDLMGGGDE 580764 Query 652 ----YFVTTKRRRGILPIILDELISARKRAKKDLRDEKDPFKRDV--LNGRQLALKISAN 705 G+LP +L L+ RK K L DP D LN RQ ALK++AN Sbjct 580763 NELPELPDDSLE*GVLPALLS*LVGRRK*VKS-LMKAADPNSSDYTQLNIRQQALKLTAN 580587 Query 706 SVYGFTGATVGKLPCLAISSSVTAYGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDTDS 765 S+YG G + A++ +TA GR ++ T + + V+YGDTDS Sbjct 580586 SMYGCLGYVKSRFYA*ALAKMITAKGREIL*DTVNLAESLLNLD--------VIYGDTDS 580431 Query 766 VMVKFGTTDLKEAMDLGTEAAKYVSTLFKHPINLEFEKAYFPYLLINKKRYAGLFWTNPD 825 +MV + DL + +G + V+ +K + +E + + L++ KK+YA + Sbjct 580430 IMVNTKSDDLSDVKKIGAKLKSEVNKKYK-LLEIEMDGFFRRILILKKKKYAAITAVEQS 580254 Query 826 KFD-KLDQ--KGLASVRRDSCSLVSIVMNKVLKKILIERNVDGALAFVRETI----NDIL 878 KLD+ KGL VRRD C + + VL IL E++ D + + + I DI Sbjct 580253 GGSVKLDREVKGLDLVRRDWCDVSHDASDYVLN*ILSEQDQDQVVLNIHQFIE*LGKDIR 580074 Query 879 HNRVDISKLIISKTLAPN---YTNPQ--PHAVLAERMKRREGVGPNVGDRVDYVIIGGND 933 +++ + K +I+K L + Y + + PH +A ++K++ G+ G+ V YVI D Sbjct 580073 EDKIPVEKFVINKALTKSPEAYGDAKS*PHVQVALKLKKK-GIVMKAGETVPYVICKDED 579897 Query 934 KLYN---RAEDPLFVLENNIQ--VDSRYYLTNQLQNPIISIVAPIIG 975 + RA P V+++ Q +D YYL Q+ PI + PI G Sbjct 579896 MTKSFALRAYHPDDVIKSEGQL*IDHDYYLNVQVHPPIGRLCQPIEG 579756 > scaffold-424 Length=148259 Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 167/648 (26%), Positives = 285/648 (44%), Gaps = 93/648 (14%) Frame = -3 Query 392 KVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEIKESVFSSKAYGTRET 451 K+D D+ +G+N + F + +++ K + GRL+ S + + +E Sbjct 74532 KIDHDMYVGHNLSGFGLDVVVSALKRFNTTGWSKLGRLRRSNWPRLNSS*NDSSKNIKEV 74353 Query 452 KNVNIDGRLQLDLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISDLQNGDSETRR 511 I GRL D + K SY+L ++ LG ++ ++ + N ++ Sbjct 74352 ----ISGRLMCDTFWLGKSYIKSNSYSLGVLAKSVLGMERPELDVEQVP*FYN-TAQDLL 74188 Query 512 RLAVYCLKDAYLPLRLMEKLMALVNYTEMARVTGVPFSYLLARGQ----QIKVVSQLFRK 567 L + DA+L ++L+ ++M + + + G + L G+ + ++ + + Sbjct 74187 WLVKHNENDAFLAMQLVFRIMLIPLTK*LTNLAGNLW*KTLTTGRSDCNEYLLLHEFTNR 74008 Query 568 CLEI-------DTVIPNMQSQASDDQ----------------------------YEGATV 592 C + D N + + D + Y G V Sbjct 74007 CYIVPDKYWMEDASRKNNGNLSQDGKKLSKMSSVYDVDAD*AD*GDKKGRKKPQYLGGLV 73828 Query 593 IEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNLKI----DEDYVITP 648 +EP +G Y + LDFNSLYPSI+ N+C+T TVER + + DED + Sbjct 73827 LEPKKGLYQNYVLLLDFNSLYPSIIQEFNICFT------TVERSDQDVMGGGDEDELPEL 73666 Query 649 NGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEKDPFKRDV--LNGRQLALKISANS 706 D G+LP +L L+ RK K L DP D LN RQ ALK++ANS Sbjct 73665 PDDSL-----E*GVLPALLS*LVGRRK*V-KSLMKAADPNSSDYTQLNIRQQALKLTANS 73504 Query 707 VYGFTGATVGKLPCLAISSSVTAYGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDTDSV 766 +YG G + A++ +TA GR ++ T + + V+YGDTDS+ Sbjct 73503 MYGCLGYVKSRFYAQALAKMITAKGREIL*DTVNLAESLLNLD--------VIYGDTDSI 73348 Query 767 MVKFGTTDLKEAMDLGTEAAKYVSTLFKHPINLEFEKAYFPYLLINKKRYAGLFWTNPDK 826 MV + DL + +G + V+ +K + +E + + L++ KK+YA + T ++ Sbjct 73347 MVNTKSDDLSDVKKIGAKLKGEVNKKYK-LLEIEMDGFFRRILILKKKKYAAI--TAVEQ 73177 Query 827 FD---KLDQ--KGLASVRRDSCSLVSIVMNKVLKKILIERNVDGALAFVRETI----NDI 877 KL++ KGL VRRD C + + VL IL E++ D + + + I DI Sbjct 73176 *GGSVKLNREVKGLDLVRRDWCDVSHDASDYVLN*ILSEQDQDQVVLNIHQFIE*LGKDI 72997 Query 878 LHNRVDISKLIISKTLAPN---YTNPQ--PHAVLAERMKRREGVGPNVGDRVDYVIIGGN 932 +++ + K +I+K L + Y + + PH +A ++K++ G+ G+ V YVI Sbjct 72996 REDKIPVEKFVINKALTKSPEAYGDAKS*PHV*VALKLKKK-GIIMKAGETVPYVICKDE 72820 Query 933 DKLYN---RAEDPLFVL--ENNIQVDSRYYLTNQLQNPIISIVAPIIG 975 D + RA P V+ E + +D YYL Q+ PI + PI G Sbjct 72819 DMTKSFALRAYHPDDVVKSEGQL*IDHDYYLNVQVHPPIARLCQPIEG 72676 > scaffold-17 Length=2125590 Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust. Identities = 57/283 (20%), Positives = 120/283 (42%), Gaps = 31/283 (11%) Frame = -3 Query 316 RIMSFDIECAGRIGVFPEPEYDPVIQIANVVS----IAGAKKPFIRNV--FTLNTCSPIT 369 RI++FDIE FP+ D ++ I+ ++ + ++ +++ F + Sbjct 1883134 RILAFDIETTKAPLKFPDVAVDQIMMISYMIDG*GYLITNREIVSQDIDDFQYSPSDEYQ 1882955 Query 370 GSMI-FSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGR 428 G I F+ +E+E+L + I +V P V + YN FD P++ R++ +++ + G Sbjct 1882954 GPFIVFNEESEKELLIRFYEHIRQV*PHVFVTYNGDFFDWPFIEQRSRVHELDMY*EIGV 1882775 Query 429 LKTVKQEIKESVFSSKAYGTRETKNVNIDGRLQLDLLQFIQREYKLR--SYTLNAVSAHF 486 K ++E S S +D L++++R+ L S L AV+ Sbjct 1882774 SKNDQEEYCSSYAS------------------HMDCLKWVKRDSYLPVGSQGLKAVTKAK 1882649 Query 487 LGEQKEDVHYSIISDLQNGDSETRRRLAVYCLKDAYLPLRLMEKLMALVNYTEMARVTGV 546 LG +++ +++ +E LA Y + DA L K + ++ + + + Sbjct 1882648 LGYDPKELDPELMTPYA---AE*PTVLADYSVSDAVATYYLYMKYVHPFIFS-LCMIIPL 1882481 Query 547 PFSYLLARGQQIKVVSQLFRKCLEIDTVIPNMQSQASDDQYEG 589 +L +G L + + + ++PN + + Q+ G Sbjct 1882480 NPDDVLRKGSGTLCEMLLMVEAYKANVIMPNKHREEHNKQFGG 1882352 > scaffold-105 Length=655906 Score = 38.5 bits (88), Expect = 0.022, Method: Compositional matrix adjust. Identities = 28/113 (25%), Positives = 56/113 (50%), Gaps = 7/113 (6%) Frame = -2 Query 316 RIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGA----KKPFIRNV--FTLNTCSPIT 369 R+++FDIE FP+ D ++ I+ ++ G ++ +++ F + Sbjct 92616 RVLAFDIETTKAPLKFPDVAVDQIMMISYMIDGQGYLITNREIVSQDIDDFQYSPSDEFQ 92437 Query 370 GSMI-FSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVN 421 G I F+ +E+E+L + I +V P V + YN FD P++ R+K +++ Sbjct 92436 GPFIVFNEESEKELLIRFYEHIRQV*PHVFVTYNGDFFDWPFIE*RSKVHELD 92278 > scaffold-22 Length=180604 Score = 33.5 bits (75), Expect = 0.69, Method: Compositional matrix adjust. Identities = 33/95 (35%), Positives = 47/95 (49%), Gaps = 12/95 (13%) Frame = +1 Query 438 ESVFSSKAYGTRETKNVNIDGRLQLDLLQFIQREYKLRSYT-LNAVSAHF--LGEQKEDV 494 + V K R K + ++ RLQ+ LQFI+ +LRS VS + L E + Sbjct 23059 QKVRRCKVQSWR*VKPLRMNNRLQM*RLQFIKFYTRLRSSKRTTCVSNQWTSLL*LLETM 23238 Query 495 HYSIISDLQNGDSETRRRLAVYCLKDAYLPLRLME 529 H I S L+N LAV +KD Y+P+RL+E Sbjct 23239 HRIIRSTLENL-------LAV--MKDGYMPIRLLE 23316 Lambda K H a alpha 0.319 0.136 0.398 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 7690363772 Database: X5.fasta Posted date: Nov 5, 2019 1:52 AM Number of letters in database: 23,962,143 Number of sequences in database: 1,868 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40