ID A0AXC9_BURCH Unreviewed; 106 AA. AC A0AXC9; DT 28-NOV-2006, integrated into UniProtKB/TrEMBL. DT 28-NOV-2006, sequence version 1. DT 14-MAY-2014, entry version 32. DE SubName: Full=Type IV secretory pathway, VirB3 family protein; GN OrderedLocusNames=Bcen2424_3314; OS Burkholderia cenocepacia (strain HI2424). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia; Burkholderia cepacia complex. OX NCBI_TaxID=331272; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=HI2424; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Pitluck S., Chain P., RA Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., RA Hauser L., Kyrpides N., Kim E., LiPuma J.J., Gonzalez C.F., RA Konstantinidis K., Tiedje J.M., Richardson P.; RT "Complete sequence of chromosome 2 of Burkholderia cenocepacia RT HI2424."; RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000459; ABK10055.1; -; Genomic_DNA. DR RefSeq; YP_836948.1; NC_008543.1. DR STRING; 331272.Bcen2424_3314; -. DR EnsemblBacteria; ABK10055; ABK10055; Bcen2424_3314. DR GeneID; 4453827; -. DR KEGG; bch:Bcen2424_3314; -. DR PATRIC; 19064117; VBIBurCen15205_3389. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; FWGASSY; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BCEN331272:GHR7-3387-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 106 AA; 11913 MW; 1B915F362A242560 CRC64; MNTLSDPVFK GCTRPAMLWG VPLVPLLMVA GGMLIPAIWV LMASAPLGVA IVLLIVPVFA TMRMITRQDD QRLAQRMLRV KMRLCQRNRR FWGAHAYAPI RLKARG // ID A0KUP9_SHESA Unreviewed; 89 AA. AC A0KUP9; DT 12-DEC-2006, integrated into UniProtKB/TrEMBL. DT 12-DEC-2006, sequence version 1. DT 14-MAY-2014, entry version 39. DE SubName: Full=Putative conjugal transfer trbD transmembrane protein; GN OrderedLocusNames=Shewana3_1284; OS Shewanella sp. (strain ANA-3). OC Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; OC Shewanellaceae; Shewanella. OX NCBI_TaxID=94122; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ANA-3; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., RA Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Kim E., Newman D., Salticov C., Konstantinidis K., Klappenback J., RA Tiedje J., Richardson P.; RT "Complete sequence of chromosome 1 of Shewanella sp. ANA-3."; RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000469; ABK47518.1; -; Genomic_DNA. DR RefSeq; YP_868924.1; NC_008577.1. DR STRING; 94122.Shewana3_1284; -. DR EnsemblBacteria; ABK47518; ABK47518; Shewana3_1284. DR GeneID; 4479858; -. DR KEGG; shn:Shewana3_1284; -. DR PATRIC; 23570252; VBISheSp134792_1559. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; WAIGHIA; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; SSP94122:GJ9K-1332-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 89 AA; 9524 MW; 0202F9E383B465BE CRC64; MSTANDLPGF EVPLHRSLTE PILLGGAPRT VAIANGTLAA AVGLGLQLWI PGVVLWIVGH SLAVWGARVD PQFMQVFARH IKHKPLLDV // ID A1AYC7_PARDP Unreviewed; 93 AA. AC A1AYC7; DT 23-JAN-2007, integrated into UniProtKB/TrEMBL. DT 23-JAN-2007, sequence version 1. DT 14-MAY-2014, entry version 33. DE SubName: Full=Conjugal transfer protein TrbB; GN OrderedLocusNames=Pden_0154; OS Paracoccus denitrificans (strain Pd 1222). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Paracoccus. OX NCBI_TaxID=318586; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Pd 1222; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., RA Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Lykidis A., Spiro S., Richardson D.J., Moir J.W.B., Ferguson S.J., RA van Spanning R.J.M., Richardson P.; RT "Complete sequence of chromosome 1 of Paracoccus denitrificans RT PD1222."; RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000489; ABL68271.1; -; Genomic_DNA. DR RefSeq; YP_913967.1; NC_008686.1. DR STRING; 318586.Pden_0154; -. DR EnsemblBacteria; ABL68271; ABL68271; Pden_0154. DR GeneID; 4580178; -. DR KEGG; pde:Pden_0154; -. DR PATRIC; 22851464; VBIParDen97112_0137. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; GHFLAVW; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; PDEN318586:GCVQ-161-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9797 MW; BD43B87B4C93E726 CRC64; MAMSFEVLDT VPGFSVPVHR ALTEPILLGG ASRSVAILNG TLAGAVGLGL QLWLAGILIW AVGHLAAVWA AKRDPLFVEV GRRHLRIPGH LAV // ID A1B238_PARDP Unreviewed; 97 AA. AC A1B238; DT 23-JAN-2007, integrated into UniProtKB/TrEMBL. DT 23-JAN-2007, sequence version 1. DT 14-MAY-2014, entry version 31. DE SubName: Full=Conjugal transfer protein trbB; GN OrderedLocusNames=Pden_1482; OS Paracoccus denitrificans (strain Pd 1222). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Paracoccus. OX NCBI_TaxID=318586; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Pd 1222; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., RA Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Lykidis A., Spiro S., Richardson D.J., Moir J.W.B., Ferguson S.J., RA van Spanning R.J.M., Richardson P.; RT "Complete sequence of chromosome 1 of Paracoccus denitrificans RT PD1222."; RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000489; ABL69582.1; -; Genomic_DNA. DR RefSeq; YP_915278.1; NC_008686.1. DR STRING; 318586.Pden_1482; -. DR EnsemblBacteria; ABL69582; ABL69582; Pden_1482. DR GeneID; 4580322; -. DR KEGG; pde:Pden_1482; -. DR PATRIC; 22854069; VBIParDen97112_1425. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; WAIGHIA; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; PDEN318586:GCVQ-1498-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 97 AA; 10337 MW; A1AA931E978D0CB5 CRC64; MSGSEWQSFE TLDAVPGFSV PVHRALTEPI LLGGAPRSVA ILNGTLAGAV GLGLQLWLVG ILIWAVGHIA AVWAARRDPL FVEVARRHLR IPGHLSV // ID A1B6Y3_PARDP Unreviewed; 93 AA. AC A1B6Y3; DT 23-JAN-2007, integrated into UniProtKB/TrEMBL. DT 23-JAN-2007, sequence version 1. DT 14-MAY-2014, entry version 30. DE SubName: Full=Conjugal transfer protein TrbB; GN OrderedLocusNames=Pden_3196; OS Paracoccus denitrificans (strain Pd 1222). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Paracoccus. OX NCBI_TaxID=318586; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Pd 1222; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., RA Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Lykidis A., Spiro S., Richardson D.J., Moir J.W.B., Ferguson S.J., RA van Spanning R.J.M., Richardson P.; RT "Complete sequence of chromosome 2 of Paracoccus denitrificans RT PD1222."; RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000490; ABL71277.1; -; Genomic_DNA. DR RefSeq; YP_916973.1; NC_008687.1. DR STRING; 318586.Pden_3196; -. DR EnsemblBacteria; ABL71277; ABL71277; Pden_3196. DR GeneID; 4581760; -. DR KEGG; pde:Pden_3196; -. DR PATRIC; 22857528; VBIParDen97112_3123. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; ALTEHIM; -. DR OrthoDB; EOG6N6849; -. DR BioCyc; PDEN318586:GCVQ-3241-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9819 MW; 1B41A51669BB9FF4 CRC64; MSAGFEQLSE VPGFSVPVHR ALNEPILLGG APRSIAILNG TLAGAVGLGL QLWLAGILIW AVGHLATVWA AKRDPLFVEV GRRHLRLPGH LAV // ID A1TK40_ACIAC Unreviewed; 89 AA. AC A1TK40; DT 06-FEB-2007, integrated into UniProtKB/TrEMBL. DT 06-FEB-2007, sequence version 1. DT 14-MAY-2014, entry version 36. DE SubName: Full=Putative conjugal transfer TrbD transmembrane protein; GN OrderedLocusNames=Aave_0728; OS Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp. OS citrulli). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Acidovorax. OX NCBI_TaxID=397945; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=AAC00-1; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., RA Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., RA Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Stahl D., RA Richardson P.; RT "Complete sequence of Acidovorax avenae subsp. citrulli AAC00-1."; RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000512; ABM31328.1; -; Genomic_DNA. DR RefSeq; YP_969102.1; NC_008752.1. DR STRING; 397945.Aave_0728; -. DR EnsemblBacteria; ABM31328; ABM31328; Aave_0728. DR GeneID; 4665329; -. DR KEGG; aav:Aave_0728; -. DR PATRIC; 20676473; VBIAciCit38535_0742. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; PGLVLWI; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; ACIT397945:GI5W-730-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 89 AA; 9510 MW; 0606BCFD7C7EC9A2 CRC64; MSKATDLPGF EVPLHRSLTE PILLGGAPRT VAIANGTLAA AVGLGLQLWI PGVVLWIAGH SLAVWGARVD PQFMQVFARH IKHKPLLDV // ID A1VQ78_POLNA Unreviewed; 107 AA. AC A1VQ78; DT 06-FEB-2007, integrated into UniProtKB/TrEMBL. DT 06-FEB-2007, sequence version 1. DT 14-MAY-2014, entry version 33. DE SubName: Full=Conjugal transfer TrbD family protein; GN OrderedLocusNames=Pnap_2502; OS Polaromonas naphthalenivorans (strain CJ2). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Polaromonas. OX NCBI_TaxID=365044; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CJ2; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Sims D.R., Brettin T., Bruce D., Han C., Tapia R., RA Brainard J., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Kim E., Madsen E.L., Richardson P.; RT "Complete sequence of chromosome 1 of Polaromonas naphthalenivorans RT CJ2."; RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000529; ABM37806.1; -; Genomic_DNA. DR RefSeq; YP_982727.1; NC_008781.1. DR STRING; 365044.Pnap_2502; -. DR EnsemblBacteria; ABM37806; ABM37806; Pnap_2502. DR GeneID; 4689500; -. DR KEGG; pna:Pnap_2502; -. DR PATRIC; 22949675; VBIPolNap76733_3371. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; TRAANFD; -. DR OrthoDB; EOG6N6849; -. DR BioCyc; PNAP365044:GJ8X-2538-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 107 AA; 11729 MW; 2A8B0667F3074EDD CRC64; MADQSKDSGA DFSVPLHQSM LRPMLLLGAE RELILALGIV AGVFIVSLFQ LWAAIFGLIL WAVGAWVLTR AANFDPQLSK TFARSLQYRK LYKSAATPFA SPRKFGG // ID A1VV02_POLNA Unreviewed; 94 AA. AC A1VV02; DT 06-FEB-2007, integrated into UniProtKB/TrEMBL. DT 06-FEB-2007, sequence version 1. DT 14-MAY-2014, entry version 35. DE SubName: Full=Putative conjugal transfer TrbD transmembrane protein; GN OrderedLocusNames=Pnap_4197; OS Polaromonas naphthalenivorans (strain CJ2). OG Plasmid pPNAP01. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Polaromonas. OX NCBI_TaxID=365044; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CJ2; PLASMID=pPNAP01; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Sims D.R., Brettin T., Bruce D., Han C., Tapia R., RA Brainard J., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Kim E., Madsen E.L., Richardson P.; RT "Complete sequence of plasmid pPNAP01 of Polaromonas naphthalenivorans RT CJ2."; RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000530; ABM39480.1; -; Genomic_DNA. DR RefSeq; YP_973222.1; NC_008757.1. DR STRING; 365044.Pnap_4197; -. DR EnsemblBacteria; ABM39480; ABM39480; Pnap_4197. DR GeneID; 4685220; -. DR KEGG; pna:Pnap_4197; -. DR PATRIC; 22942983; VBIPolNap76733_0069. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; PGLVLWI; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; PNAP365044:GJ8X-4252-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Plasmid; Transmembrane. SQ SEQUENCE 94 AA; 10111 MW; 21AB4B4347BBA9A1 CRC64; MSTETEFAQG FASGFEIPLH RSLTEPILLG GAPRTVAIAN GTLAAAVGLG LQLWIPGLVL WIVGHSLAVW GARLDPQFMA VFSRHIKHRP LLDV // ID A1W9X5_ACISJ Unreviewed; 90 AA. AC A1W9X5; DT 06-FEB-2007, integrated into UniProtKB/TrEMBL. DT 06-FEB-2007, sequence version 1. DT 14-MAY-2014, entry version 37. DE SubName: Full=Putative conjugal transfer TrbD transmembrane protein; GN OrderedLocusNames=Ajs_2909; OS Acidovorax sp. (strain JS42). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Acidovorax. OX NCBI_TaxID=232721; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=JS42; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., RA Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., RA Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Stahl D., RA Richardson P.; RT "Complete sequence of chromosome 1 of Acidovorax sp. JS42."; RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000539; ABM43050.1; -; Genomic_DNA. DR RefSeq; YP_987126.1; NC_008782.1. DR STRING; 232721.Ajs_2909; -. DR EnsemblBacteria; ABM43050; ABM43050; Ajs_2909. DR GeneID; 4672507; -. DR KEGG; ajs:Ajs_2909; -. DR PATRIC; 20691189; VBIAciSp27161_3115. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; PGLVLWI; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; ASP232721:GHWE-2951-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 90 AA; 9664 MW; 088D32015143E70D CRC64; MNGPHDGIPG FEVPLHRSLT EPILMGGAPR TVAITNGTLA AAVGLGLQMW IPGLVLWIVG HSLAVWGARV DPQFMAVFAR HIKHRPLLDV // ID A1WDP6_ACISJ Unreviewed; 103 AA. AC A1WDP6; DT 06-FEB-2007, integrated into UniProtKB/TrEMBL. DT 06-FEB-2007, sequence version 1. DT 14-MAY-2014, entry version 36. DE SubName: Full=Conjugal transfer TrbD family protein; DE Flags: Precursor; GN OrderedLocusNames=Ajs_4272; OS Acidovorax sp. (strain JS42). OG Plasmid pAOVO02. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Acidovorax. OX NCBI_TaxID=232721; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=JS42; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., RA Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., RA Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Stahl D., RA Richardson P.; RT "Complete sequence of plasmid 2 pAOVO02 of Acidovorax sp. JS42."; RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000541; ABM44371.1; -; Genomic_DNA. DR RefSeq; YP_974106.1; NC_008766.1. DR STRING; 232721.Ajs_4272; -. DR EnsemblBacteria; ABM44371; ABM44371; Ajs_4272. DR GeneID; 4670498; -. DR KEGG; ajs:Ajs_4272; -. DR PATRIC; 20685097; VBIAciSp27161_0108. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; LRMMAKS; -. DR OrthoDB; EOG6N6849; -. DR BioCyc; ASP232721:GHWE-4336-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 103 AA; 11802 MW; 8F4CEDEE6B161847 CRC64; MALRAIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QEVRATVFGI ALWFGALFAL RLMAKADPKL RHVYLRHRRY KPYYPARSTP FRDNTPSQGK QYK // ID A1WZW8_CAMJJ Unreviewed; 922 AA. AC A1WZW8; DT 06-FEB-2007, integrated into UniProtKB/TrEMBL. DT 06-FEB-2007, sequence version 1. DT 14-MAY-2014, entry version 42. DE SubName: Full=CmgB3/4; GN OrderedLocusNames=CJJ81176_pTet0028; OS Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176). OG Plasmid pTet. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=354242; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=81-176; RA Fouts D.E., Nelson K.E.; RL Submitted (JAN-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000549; EAQ71805.1; -; Genomic_DNA. DR RefSeq; YP_001004032.1; NC_008790.1. DR RefSeq; YP_247544.1; NC_007141.1. DR ProteinModelPortal; A1WZW8; -. DR STRING; 354242.CJJ81176_pTet0028; -. DR EnsemblBacteria; EAQ71805; EAQ71805; CJJ81176_pTet0028. DR GeneID; 3429172; -. DR GeneID; 4711578; -. DR KEGG; cjj:CJJ81176_pTet0028; -. DR PATRIC; 20053497; VBICamJej103413_1741. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119263; -. DR KO; K03199; -. DR OMA; RHESNER; -. DR BioCyc; CJEJ354242:GC51-1735-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 922 AA; 106297 MW; C8AB77997254E9DD CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGC IILIAFYSQN IFLVGFSIPV FFIMKAMTKR DDFIFRLMFL KMRFFSNPAS KNYHKVKTYS TNSYRQMPPN SNFPKISVFG LNAEPSFEKL IPFSSLINDS VVITKDYFLM TTWEIGGISF EAEEDDELDI KNDLLNMLFK SFANESVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLRKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSK QLEFYNYLLG GKFNPIRVLP SPIEQYLNGN LQNIQFGHDT IQFNQNDSTK KFARCIEIKD YTNETFAGIL DILMYLDVEY TVTQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVEQID EALDQLTNGE ISFGKYHFSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN YSSLIALHNF SMGKRDKNCW GDAVSILKTP NKQPYYFNFH QSSGANKNDF GKFFLANTLI LGQSSGGKTV FMNFIVDQMM KYASKDTFPD DIPEDKRKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVEST QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDN LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSLEDFLK LKNAATLIEQ SSTMVFLSNP KAKEEEYVKG VGLSYDEYMI IKGFNPVKRQ FLIKRQDEKV ICTLDLSPLG NENLKILSTE TAYIDVIEKI FSQENKSLDE KVLELKEIYK NS // ID A1YBN1_9GAMM Unreviewed; 113 AA. AC A1YBN1; DT 06-FEB-2007, integrated into UniProtKB/TrEMBL. DT 06-FEB-2007, sequence version 1. DT 29-MAY-2013, entry version 6. DE SubName: Full=Conjugal transfer protein; GN Name=traD; OS Aeromonas veronii. OC Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; OC Aeromonadaceae; Aeromonas. OX NCBI_TaxID=654; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MTCC 3249; RX PubMed=17205119; DOI=10.1371/journal.pone.0000115; RA Rangrez A.Y., Dayananda K.M., Atanur S., Joshi R., Patole M.S., RA Shouche Y.S.; RT "Detection of Conjugation Related Type Four Secretion Machinery in RT Aeromonas culicicola."; RL PLoS ONE 1:E115-E115(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DQ890522; ABI83639.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 113 AA; 12609 MW; B2A18801BE4A873A CRC64; MQQPKEKDQY ATYNGLNRPA MAMGIPLMLL LLLGFIGVFG TFLCLFMFGA KGFVFTAFIF LVAFALKLIC EKDPNALDVV KMNMKGWFIN LRQNIAVMGK DSIIGFDSTG IKK // ID A3EW08_9BACT Unreviewed; 104 AA. AC A3EW08; DT 20-MAR-2007, integrated into UniProtKB/TrEMBL. DT 20-MAR-2007, sequence version 1. DT 09-FEB-2010, entry version 11. DE SubName: Full=Putative conjugal transfer protein (TrbD); GN ORFNames=UBAL2_86920201; OS Leptospirillum rubarum. OC Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum. OX NCBI_TaxID=419542; RN [1] RP NUCLEOTIDE SEQUENCE. RX PubMed=17344860; DOI=10.1038/nature05624; RA Lo I., Denef V.J., Verberkmoes N.C., Shah M.B., Goltsman D., RA DiBartolo G., Tyson G.W., Allen E.E., Ram R.J., Detter J.C., RA Richardson P., Thelen M.P., Hettich R.L., Banfield J.F.; RT "Strain-resolved community proteomics reveals recombining genomes of RT acidophilic bacteria."; RL Nature 446:537-541(2007). RN [2] RP NUCLEOTIDE SEQUENCE. RX PubMed=19429552; DOI=10.1128/AEM.02943-08; RA Goltsman D.S., Denef V.J., Singer S.W., VerBerkmoes N.C., Lefsrud M., RA Mueller R.S., Dick G.J., Sun C.L., Wheeler K.E., Zemla A., Baker B.J., RA Hauser L., Land M., Shah M.B., Thelen M.P., Hettich R.L., RA Banfield J.F.; RT "Community genomic and proteomic analyses of chemoautotrophic iron- RT oxidizing "Leptospirillum rubarum" (Group II) and "Leptospirillum RT ferrodiazotrophum" (Group III) bacteria in acid mine drainage RT biofilms."; RL Appl. Environ. Microbiol. 75:4599-4615(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS180874; EAY56043.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 104 AA; 11609 MW; 25BB21045F351FD6 CRC64; MSSRRTVPIH QSLVKPLLLA GGDRELVLFN VVLMAGTLFM MGLSVFSVSL TSLAGGLTHI GLVRMAKTDP QMRDVYLVFR KYRTFYPARP DARVNGKQNR RSAL // ID A3K4J3_9RHOB Unreviewed; 92 AA. AC A3K4J3; DT 03-APR-2007, integrated into UniProtKB/TrEMBL. DT 03-APR-2007, sequence version 1. DT 19-FEB-2014, entry version 8. DE SubName: Full=Uncharacterized protein; GN ORFNames=SSE37_01525; OS Sagittula stellata E-37. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Sagittula. OX NCBI_TaxID=388399; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=E-37; RA Moran M.A., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G., RA Rogers Y.-H., Friedman R., Frazier M., Venter J.C.; RL Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAYA01000007; EBA07892.1; -; Genomic_DNA. DR EnsemblBacteria; EBA07892; EBA07892; SSE37_01525. DR PATRIC; 29860861; VBISagSte54459_2719. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 92 AA; 10337 MW; 476BCB4DCDBE5535 CRC64; MADQSRVFIG LLRPPKLMGL PIMYAMVWLF GSTLLFLWVQ SWVVAVFAGL AWPALWKAAD WDPNFLDVLV ITLQETPPTT NRKLDGGDSY AP // ID A3LA76_PSEAI Unreviewed; 89 AA. AC A3LA76; DT 03-APR-2007, integrated into UniProtKB/TrEMBL. DT 03-APR-2007, sequence version 1. DT 03-APR-2013, entry version 11. DE SubName: Full=Putative uncharacterized protein; GN ORFNames=PA2G_02325; OS Pseudomonas aeruginosa 2192. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. OX NCBI_TaxID=350703; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=2192; RX PubMed=18287045; DOI=10.1073/pnas.0711982105; RA Mathee K., Narasimhan G., Valdes C., Qiu X., Matewish J.M., RA Koehrsen M., Rokas A., Yandava C.N., Engels R., Zeng E., RA Olavarietta R., Doud M., Smith R.S., Montgomery P., White J.R., RA Godfrey P.A., Kodira C., Birren B., Galagan J.E., Lory S.; RT "Dynamics of Pseudomonas aeruginosa genome evolution."; RL Proc. Natl. Acad. Sci. U.S.A. 105:3100-3105(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CH482384; EAZ59062.1; -; Genomic_DNA. DR EnsemblBacteria; EAZ59062; EAZ59062; PA2G_02325. DR PATRIC; 25554823; VBIPseAer126331_1862. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 89 AA; 9469 MW; E7E753E387C19438 CRC64; MSTATDLPGF EVPLHRSLTE PILLGGAPRT VAIANGTLAA AVGLGLQLWI PGLVLWIAGH SLAVWGARVD PQFMQVFARH IKHKPLLDA // ID A3SS19_9RHOB Unreviewed; 92 AA. AC A3SS19; DT 03-APR-2007, integrated into UniProtKB/TrEMBL. DT 03-APR-2007, sequence version 1. DT 03-APR-2013, entry version 9. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=ISM_17380; OS Roseovarius nubinhibens ISM. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Roseovarius. OX NCBI_TaxID=89187; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ISM; RA Moran M.A., Ferriera S., Johnson J., Kravitz S., Halpern A., RA Remington K., Beeson K., Tran B., Rogers Y.-H., Friedman R., RA Venter J.C.; RL Submitted (DEC-2005) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AALY01000006; EAP74952.1; -; Genomic_DNA. DR EnsemblBacteria; EAP74952; EAP74952; ISM_17380. DR PATRIC; 28132541; VBIRosNub115512_3472. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 92 AA; 10376 MW; 2F96D07FDC6E4BD2 CRC64; MAERAPLFLG LVRPPKLLGL PIMYAMVWLF GSVLLFVWVQ HIAVLGVAAL LYPVLWKAAD WDPRFIDVMM TALQETPPTR NRSIHDGDSY AP // ID A3T2L4_9RHOB Unreviewed; 63 AA. AC A3T2L4; DT 03-APR-2007, integrated into UniProtKB/TrEMBL. DT 03-APR-2007, sequence version 1. DT 19-FEB-2014, entry version 10. DE SubName: Full=Uncharacterized protein; GN ORFNames=NAS141_04633; OS Sulfitobacter sp. NAS-14.1. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Sulfitobacter. OX NCBI_TaxID=314267; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NAS-14.1; RA Moran M.A., Ferriera S., Johnson J., Kravitz S., Halpern A., RA Remington K., Beeson K., Tran B., Rogers Y.-H., Friedman R., RA Venter J.C.; RL Submitted (DEC-2005) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AALZ01000014; EAP78735.1; -; Genomic_DNA. DR EnsemblBacteria; EAP78735; EAP78735; NAS141_04633. DR PATRIC; 28314341; VBISulSp100835_3040. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 63 AA; 7253 MW; DC94DB3D9B05169C CRC64; MGIVLPFIWT KSLIFFLIGI IAYPILWFVA DKEPHFFEVL RVSFGTVRAT KNRKFWGGDS FGA // ID A3T386_9RHOB Unreviewed; 92 AA. AC A3T386; DT 03-APR-2007, integrated into UniProtKB/TrEMBL. DT 03-APR-2007, sequence version 1. DT 19-FEB-2014, entry version 10. DE SubName: Full=Uncharacterized protein; GN ORFNames=NAS141_02561; OS Sulfitobacter sp. NAS-14.1. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Sulfitobacter. OX NCBI_TaxID=314267; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NAS-14.1; RA Moran M.A., Ferriera S., Johnson J., Kravitz S., Halpern A., RA Remington K., Beeson K., Tran B., Rogers Y.-H., Friedman R., RA Venter J.C.; RL Submitted (DEC-2005) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AALZ01000019; EAP78555.1; -; Genomic_DNA. DR EnsemblBacteria; EAP78555; EAP78555; NAS141_02561. DR PATRIC; 28314838; VBISulSp100835_3287. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 92 AA; 10318 MW; 83E717058E5B353B CRC64; MAERSPLFLG LARPPKYLGL PVGYLVVLAM GVVLPFIWTK SLIFFLIGII AYPVLWFVAD KEPHFFEVLR ISFGTVRSTK NRTYHGGDSF GA // ID A3TZH8_9RHOB Unreviewed; 92 AA. AC A3TZH8; DT 03-APR-2007, integrated into UniProtKB/TrEMBL. DT 03-APR-2007, sequence version 1. DT 03-APR-2013, entry version 9. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=OB2597_17122; OS Oceanicola batsensis HTCC2597. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Oceanicola. OX NCBI_TaxID=252305; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=HTCC2597; RX PubMed=20418400; DOI=10.1128/JB.00412-10; RA Thrash J.C., Cho J.C., Vergin K.L., Giovannoni S.J.; RT "Genome sequences of Oceanicola granulosus HTCC2516(T) and Oceanicola RT batsensis HTCC2597(TDelta)."; RL J. Bacteriol. 192:3549-3550(2010). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAMO01000007; EAQ02459.1; -; Genomic_DNA. DR EnsemblBacteria; EAQ02459; EAQ02459; OB2597_17122. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 92 AA; 10396 MW; E4FE0007F11741BE CRC64; MAERSPLFLG LVRPPKLLGL PIMYAMVWLF GSVLLFVWVQ HMLVLGIAAV LYPVLWKAAD WDPRFIDVMM TSLQETPPTR NRSVHGGDSY AP // ID A3U059_9RHOB Unreviewed; 92 AA. AC A3U059; DT 03-APR-2007, integrated into UniProtKB/TrEMBL. DT 03-APR-2007, sequence version 1. DT 03-APR-2013, entry version 9. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=OB2597_18277; OS Oceanicola batsensis HTCC2597. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Oceanicola. OX NCBI_TaxID=252305; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=HTCC2597; RX PubMed=20418400; DOI=10.1128/JB.00412-10; RA Thrash J.C., Cho J.C., Vergin K.L., Giovannoni S.J.; RT "Genome sequences of Oceanicola granulosus HTCC2516(T) and Oceanicola RT batsensis HTCC2597(TDelta)."; RL J. Bacteriol. 192:3549-3550(2010). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAMO01000007; EAQ02690.1; -; Genomic_DNA. DR EnsemblBacteria; EAQ02690; EAQ02690; OB2597_18277. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 92 AA; 10272 MW; 7D48ABFCDF59DF83 CRC64; MAERSPLFLG LVRPPKLLGL PIMYAMVWLF GSVLLFVWIQ HLAVLGLAAV LYPVLWKAAD WDPRFLDVMV TALQETPPTR NRGVHGGDSY AP // ID A3U3A5_9RHOB Unreviewed; 92 AA. AC A3U3A5; DT 03-APR-2007, integrated into UniProtKB/TrEMBL. DT 03-APR-2007, sequence version 1. DT 19-FEB-2014, entry version 11. DE SubName: Full=Uncharacterized protein; GN ORFNames=OB2597_16747; OS Oceanicola batsensis HTCC2597. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Oceanicola. OX NCBI_TaxID=252305; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=HTCC2597; RX PubMed=20418400; DOI=10.1128/JB.00412-10; RA Thrash J.C., Cho J.C., Vergin K.L., Giovannoni S.J.; RT "Genome sequences of Oceanicola granulosus HTCC2516(T) and Oceanicola RT batsensis HTCC2597(TDelta)."; RL J. Bacteriol. 192:3549-3550(2010). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAMO01000014; EAQ01420.1; -; Genomic_DNA. DR EnsemblBacteria; EAQ01420; EAQ01420; OB2597_16747. DR PATRIC; 28496402; VBIOceBat2886_3298. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 92 AA; 10348 MW; E4FFF07FC26FAEE5 CRC64; MAERAPLFLG LVRPPKLLGL PIMYAMVWLF GSVLLFVWVQ HIAVLAVAAL LYPVLWKAAD WDPRFIDVMM TSLQETPPTR NRSIHGGDSY AP // ID A3U3F7_9RHOB Unreviewed; 67 AA. AC A3U3F7; DT 03-APR-2007, integrated into UniProtKB/TrEMBL. DT 03-APR-2007, sequence version 1. DT 19-FEB-2014, entry version 8. DE SubName: Full=Uncharacterized protein; GN ORFNames=OB2597_18561; OS Oceanicola batsensis HTCC2597. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Oceanicola. OX NCBI_TaxID=252305; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=HTCC2597; RX PubMed=20418400; DOI=10.1128/JB.00412-10; RA Thrash J.C., Cho J.C., Vergin K.L., Giovannoni S.J.; RT "Genome sequences of Oceanicola granulosus HTCC2516(T) and Oceanicola RT batsensis HTCC2597(TDelta)."; RL J. Bacteriol. 192:3549-3550(2010). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAMO01000015; EAQ01293.1; -; Genomic_DNA. DR EnsemblBacteria; EAQ01293; EAQ01293; OB2597_18561. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 67 AA; 7559 MW; D15AF82C41401D21 CRC64; MVLTTGVVLP FIWTKSMVFF LIGLVAYPIL WFVADREPHF FEVLRVSYGS VRPTKNRALH GGDSFGA // ID A3UHM3_9RHOB Unreviewed; 89 AA. AC A3UHM3; DT 03-APR-2007, integrated into UniProtKB/TrEMBL. DT 03-APR-2007, sequence version 1. DT 19-MAR-2014, entry version 15. DE SubName: Full=Probable conjugal transfer protein; GN ORFNames=OA2633_08779; OS Oceanicaulis sp. HTCC2633. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Hyphomonadaceae; Oceanicaulis. OX NCBI_TaxID=314254; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=HTCC2633; RX PubMed=21036991; DOI=10.1128/JB.01267-10; RA Oh H.M., Kang I., Vergin K.L., Lee K., Giovannoni S.J., Cho J.C.; RT "Genome sequence of Oceanicaulis sp. strain HTCC2633, isolated from RT the Western Sargasso Sea."; RL J. Bacteriol. 193:317-318(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAMQ01000004; EAP89346.1; -; Genomic_DNA. DR EnsemblBacteria; EAP89346; EAP89346; OA2633_08779. DR PATRIC; 25535634; VBIOceAle934_2556. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 89 AA; 9629 MW; A4B04E0C7619C498 CRC64; MRELADIPGF YAPVHRALVE PILLGGAPRT VAIANGTLAA AVGLGLRLWV VGIALWLVGH LLAVWAAKRD AQIVDVARRH LRFPTWFGV // ID A3VIX0_9RHOB Unreviewed; 92 AA. AC A3VIX0; DT 03-APR-2007, integrated into UniProtKB/TrEMBL. DT 03-APR-2007, sequence version 1. DT 19-FEB-2014, entry version 12. DE SubName: Full=Uncharacterized protein; GN ORFNames=RB2654_00470; OS Maritimibacter alkaliphilus HTCC2654. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Maritimibacter. OX NCBI_TaxID=314271; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=HTCC2654; RX PubMed=20729358; DOI=10.1128/JB.00873-10; RA Thrash J.C., Cho J.C., Ferriera S., Johnson J., Vergin K.L., RA Giovannoni S.J.; RT "Genome sequences of Pelagibaca bermudensis HTCC2601T and RT Maritimibacter alkaliphilus HTCC2654T, the type strains of two marine RT Roseobacter genera."; RL J. Bacteriol. 192:5552-5553(2010). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAMT01000012; EAQ11814.1; -; Genomic_DNA. DR EnsemblBacteria; EAQ11814; EAQ11814; RB2654_00470. DR PATRIC; 28480858; VBIRhoBac6565_4004. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 92 AA; 10212 MW; 730412F03AB23588 CRC64; MAERSPLFLG LARPPKYLGL PVGYLVVLAT GVVLPFIWTK SMVFFLIGIV AYPILWFVAD REPHFFEVLR VSYGSVRATK NRALHGGDSF GA // ID A3VJ89_9RHOB Unreviewed; 92 AA. AC A3VJ89; DT 03-APR-2007, integrated into UniProtKB/TrEMBL. DT 03-APR-2007, sequence version 1. DT 03-APR-2013, entry version 10. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=RB2654_22453; OS Maritimibacter alkaliphilus HTCC2654. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Maritimibacter. OX NCBI_TaxID=314271; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=HTCC2654; RX PubMed=20729358; DOI=10.1128/JB.00873-10; RA Thrash J.C., Cho J.C., Ferriera S., Johnson J., Vergin K.L., RA Giovannoni S.J.; RT "Genome sequences of Pelagibaca bermudensis HTCC2601T and RT Maritimibacter alkaliphilus HTCC2654T, the type strains of two marine RT Roseobacter genera."; RL J. Bacteriol. 192:5552-5553(2010). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAMT01000013; EAQ11696.1; -; Genomic_DNA. DR EnsemblBacteria; EAQ11696; EAQ11696; RB2654_22453. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 92 AA; 10334 MW; 3D85F14DCF5C491C CRC64; MAERSPLFLG LVRPPKLLGL PIMYAMVWLF GSVLLFVWVQ HIAVLGVAAL LYPVLWKAAD WDPRFIDVMM TALQETPPTR NRSIHGGDSY AP // ID A3W3E4_9RHOB Unreviewed; 92 AA. AC A3W3E4; DT 03-APR-2007, integrated into UniProtKB/TrEMBL. DT 03-APR-2007, sequence version 1. DT 19-FEB-2014, entry version 10. DE SubName: Full=Uncharacterized protein; GN ORFNames=ROS217_01445; OS Roseovarius sp. 217. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Roseovarius. OX NCBI_TaxID=314264; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=217; RA Murrell J.C., Schafer H., Ferriera S., Johnson J., Kravitz S., RA Halpern A., Remington K., Beeson K., Tran B., Rogers Y.-H., RA Friedman R., Venter J.C.; RL Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAMV01000007; EAQ24733.1; -; Genomic_DNA. DR EnsemblBacteria; EAQ24733; EAQ24733; ROS217_01445. DR PATRIC; 28140950; VBIRosSp94902_4064. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 92 AA; 10231 MW; C44D81B0E844338C CRC64; MAERSSLFQG LARPPKYLGL PVGYLLALAM GVVLPFIWTG SLIFLPLGII AYPILWFVAD KEPHFFEVLR VSYGIVRPTK NRRLHGGDSF GA // ID A3W6D6_9RHOB Unreviewed; 91 AA. AC A3W6D6; DT 03-APR-2007, integrated into UniProtKB/TrEMBL. DT 03-APR-2007, sequence version 1. DT 19-FEB-2014, entry version 8. DE SubName: Full=Uncharacterized protein; GN ORFNames=ROS217_00310; OS Roseovarius sp. 217. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Roseovarius. OX NCBI_TaxID=314264; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=217; RA Murrell J.C., Schafer H., Ferriera S., Johnson J., Kravitz S., RA Halpern A., Remington K., Beeson K., Tran B., Rogers Y.-H., RA Friedman R., Venter J.C.; RL Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAMV01000012; EAQ23772.1; -; Genomic_DNA. DR EnsemblBacteria; EAQ23772; EAQ23772; ROS217_00310. DR PATRIC; 28141537; VBIRosSp94902_4357. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 91 AA; 10193 MW; 1F5B8B42C99B85BB CRC64; MRDTPLFLGL TKPPRIFGLP IGYFVALVFA SVIPFILVDD MRFLLVFLAG YPPLWLVADR NPHLFQILNV VMSRTPRTSV RSGDGGDLYV A // ID A3W8H4_9RHOB Unreviewed; 90 AA. AC A3W8H4; DT 03-APR-2007, integrated into UniProtKB/TrEMBL. DT 03-APR-2007, sequence version 1. DT 19-FEB-2014, entry version 10. DE SubName: Full=Uncharacterized protein; DE Flags: Fragment; GN ORFNames=ROS217_02460; OS Roseovarius sp. 217. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Roseovarius. OX NCBI_TaxID=314264; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=217; RA Murrell J.C., Schafer H., Ferriera S., Johnson J., Kravitz S., RA Halpern A., Remington K., Beeson K., Tran B., Rogers Y.-H., RA Friedman R., Venter J.C.; RL Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAMV01000020; EAQ23077.1; -; Genomic_DNA. DR EnsemblBacteria; EAQ23077; EAQ23077; ROS217_02460. DR PATRIC; 28141350; VBIRosSp94902_4264. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; FT NON_TER 1 1 SQ SEQUENCE 90 AA; 10062 MW; D6ABC2DF804F18F2 CRC64; RDTPLFLGLT KPPRIFGLPI GYFVALVFAS VIPFILVDDM RFLLVFLAGY PPLWLVADRN PHLFQILNVV MSRTPRTSVR SGDGGDLYVA // ID A3W931_9RHOB Unreviewed; 92 AA. AC A3W931; DT 03-APR-2007, integrated into UniProtKB/TrEMBL. DT 03-APR-2007, sequence version 1. DT 19-FEB-2014, entry version 10. DE SubName: Full=Uncharacterized protein; GN ORFNames=ROS217_02880; OS Roseovarius sp. 217. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Roseovarius. OX NCBI_TaxID=314264; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=217; RA Murrell J.C., Schafer H., Ferriera S., Johnson J., Kravitz S., RA Halpern A., Remington K., Beeson K., Tran B., Rogers Y.-H., RA Friedman R., Venter J.C.; RL Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAMV01000025; EAQ22919.1; -; Genomic_DNA. DR EnsemblBacteria; EAQ22919; EAQ22919; ROS217_02880. DR PATRIC; 28141954; VBIRosSp94902_4566. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 92 AA; 10360 MW; E4FFF06C7EE475E5 CRC64; MAERAPLFLG LVRPPKLLGL PIMYAMVWLF GSVLLFVWVQ HIAVLAVAVL LYPVLWKAAD WDPRFIDVMM TALQETPPTR NRSIHGGDSY AP // ID A3WHY5_9SPHN Unreviewed; 94 AA. AC A3WHY5; DT 03-APR-2007, integrated into UniProtKB/TrEMBL. DT 03-APR-2007, sequence version 1. DT 03-APR-2013, entry version 10. DE SubName: Full=Type IV secretion system protein B3, putative; GN ORFNames=NAP1_09187; OS Erythrobacter sp. NAP1. OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Erythrobacteraceae; Erythrobacter. OX NCBI_TaxID=237727; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NAP1; RA Falkowski P., Ferriera S., Johnson J., Kravitz S., Halpern A., RA Remington K., Beeson K., Tran B., Rogers Y.-H., Friedman R., RA Venter J.C.; RL Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NAP1; RX PubMed=21952547; DOI=10.1128/JB.05845-11; RA Koblizek M., Janouskovec J., Obornik M., Johnson J.H., Ferriera S., RA Falkowski P.G.; RT "Genome Sequence of the Marine Photoheterotrophic Bacterium RT Erythrobacter sp. Strain NAP1."; RL J. Bacteriol. 193:5881-5882(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAMW01000003; EAQ27756.1; -; Genomic_DNA. DR EnsemblBacteria; EAQ27756; EAQ27756; NAP1_09187. DR PATRIC; 30316356; VBIErySp29781_1824. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 94 AA; 11122 MW; BB6ADE49DC61E662 CRC64; MSDLIRHPVH RTLTRPQMFM GVTMNFFIIN MMVTTISFLI LNSFWIVPVP FVMHAIGYFA SLREPRIFDL WITKVSKCPR IPNFRRWGCN SYAP // ID A3XDV8_9RHOB Unreviewed; 92 AA. AC A3XDV8; DT 03-APR-2007, integrated into UniProtKB/TrEMBL. DT 03-APR-2007, sequence version 1. DT 19-FEB-2014, entry version 9. DE SubName: Full=Uncharacterized protein; GN ORFNames=MED193_00595; OS Roseobacter sp. MED193. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Roseobacter. OX NCBI_TaxID=314262; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MED193; RA Pinhassi J., Pedros-Alio C., Ferriera S., Johnson J., Kravitz S., RA Halpern A., Remington K., Beeson K., Tran B., Rogers Y.-H., RA Friedman R., Venter J.C.; RL Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AANB01000012; EAQ43991.1; -; Genomic_DNA. DR EnsemblBacteria; EAQ43991; EAQ43991; MED193_00595. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 92 AA; 10272 MW; 96E216058E5B36F4 CRC64; MAERSPLFLG LARPPKYLGL PVGYLVVLAM GVVLPFIWTK SLIFFLIGII AYPVLWFVAD KEPHFFEVLR ISFGTVRPTK NRAHHGGDSF GA // ID A3XE97_9RHOB Unreviewed; 92 AA. AC A3XE97; DT 03-APR-2007, integrated into UniProtKB/TrEMBL. DT 03-APR-2007, sequence version 1. DT 19-FEB-2014, entry version 9. DE SubName: Full=Uncharacterized protein; GN ORFNames=MED193_02620; OS Roseobacter sp. MED193. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Roseobacter. OX NCBI_TaxID=314262; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MED193; RA Pinhassi J., Pedros-Alio C., Ferriera S., Johnson J., Kravitz S., RA Halpern A., Remington K., Beeson K., Tran B., Rogers Y.-H., RA Friedman R., Venter J.C.; RL Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AANB01000013; EAQ43860.1; -; Genomic_DNA. DR EnsemblBacteria; EAQ43860; EAQ43860; MED193_02620. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 92 AA; 10348 MW; F6ECD14DCF5C4EFB CRC64; MAERSPLFLG LVRPPKLLGL PIMYAMVWLF GSVLLFVWVQ HIAVLAVAAL LYPVLWKAAD WDPRFIDVMM TALQETPPTR NRSIHGGDSY AP // ID A3ZFR7_CAMJU Unreviewed; 922 AA. AC A3ZFR7; DT 03-APR-2007, integrated into UniProtKB/TrEMBL. DT 03-APR-2007, sequence version 1. DT 16-APR-2014, entry version 18. DE SubName: Full=Uncharacterized protein; GN ORFNames=CJJHB9313_pTet0018; OS Campylobacter jejuni subsp. jejuni HB93-13. OG Plasmid pTet. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=360112; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=HB93-13; PLASMID=pTet; RA Fouts D., Nelson W.C., Mongodin E., Schobel S., Sebastian Y., RA Shomokin I., Nelson K.; RT "Sequence of Campylobacter jejuni subsp jejuni HB93-13."; RL Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AANQ01000006; EAQ59632.1; -; Genomic_DNA. DR ProteinModelPortal; A3ZFR7; -. DR EnsemblBacteria; EAQ59632; EAQ59632; CJJHB9313_pTet0018. DR PATRIC; 27763180; VBICamJej65950_1668. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 922 AA; 106180 MW; 6F902DEC3BFC7363 CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGS IILVAFYSQN IFLVGFSIPV FFIMKAMTKK DDFIFRLMFL KMRFFSNPAS KNYYKAKTYS TNSYRQMPPN SNFPKISVFG LNAEPNFEKL IPFSSLINDS VVITKDYLLM TTWEIGGISF EAEDDDELDI KNDLLNMLFK SFANEPVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLRKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSK QLEFYNYLLG GKFNPIRVLP SPIDQYLNGN LQNIQFGHDT IQFNQNDSTK RFARCIEIKD YTNETFAGIL DILMYLDVEY TITQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVAQID EALDQLTNGE ISFGKYHLSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN FSSLIALHNF SMGKKEKNCW GDAVTILKTP NKQPYYFNFH QSSGVNKNDF GKFFLANTLI LGQSSGGKTV FMNFIVDQMM KYASKDTFPD DIPEDKRKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVEST QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNKYDS LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSLEDFLK LKNAATLIEQ SSTMVFLSNP KAKEEEYVKG VGLSYDEYMI IKGFNPVKRQ FLIKRQDEKV ICTLDLSPLG NENLKILSTE TAYIDVIEKI FSQENKSLDE KVLELKEFYK NS // ID A4AAL4_9GAMM Unreviewed; 89 AA. AC A4AAL4; DT 03-APR-2007, integrated into UniProtKB/TrEMBL. DT 03-APR-2007, sequence version 1. DT 16-APR-2014, entry version 19. DE SubName: Full=Type IV secretory pathway, TrbD component; GN ORFNames=KT71_12550; OS Congregibacter litoralis KT71. OC Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; OC Congregibacter. OX NCBI_TaxID=314285; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=KT71; RX PubMed=17299055; DOI=10.1073/pnas.0608046104; RA Fuchs B.M., Spring S., Teeling H., Quast C., Wulf J., RA Schattenhofer M., Yan S., Ferriera S., Johnson J., Glockner F.O., RA Amann R.; RT "Characterization of a marine gammaproteobacterium capable of aerobic RT anoxygenic photosynthesis."; RL Proc. Natl. Acad. Sci. U.S.A. 104:2891-2896(2007). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=KT71; RX PubMed=19287491; DOI=10.1371/journal.pone.0004866; RA Spring S., Lunsdorf H., Fuchs B.M., Tindall B.J.; RT "The photosynthetic apparatus and its regulation in the aerobic RT gammaproteobacterium Congregibacter litoralis gen. nov., sp. nov."; RL PLoS ONE 4:E4866-E4866(2009). RN [3] RP NUCLEOTIDE SEQUENCE. RC STRAIN=KT71; RA Spring S., Fiebig A., Goeker M.; RT "Genome sequence of Congregibacter litoralis."; RL Submitted (OCT-2013) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAOA02000003; EAQ97091.1; -; Genomic_DNA. DR EnsemblBacteria; EAQ97091; EAQ97091; KT71_12550. DR PATRIC; 29067597; VBIConLit32816_1101. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 89 AA; 9455 MW; E7E753E3937EDFD8 CRC64; MSTATDLPGF EVPLHRSLTE PILLGGAPRT VAIANGTLAA AVGLGLQLWI PGVVLWIAGH SLAVWGARVD PQFMQVFARH IKHKPLLDA // ID A4GZG0_KLEPN Unreviewed; 912 AA. AC A4GZG0; DT 01-MAY-2007, integrated into UniProtKB/TrEMBL. DT 01-MAY-2007, sequence version 1. DT 14-MAY-2014, entry version 23. DE SubName: Full=Pilx3-4/VirB3-4-like protein; GN Name=virB3-4; OS Klebsiella pneumoniae. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Klebsiella. OX NCBI_TaxID=573; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NTUH-K2044; RA Lin T., Lee C., Hsieh P., Tsai S., Wang J.; RL Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NTUH-K2044; RX PubMed=17981959; DOI=10.1128/JB.01219-07; RA Lin T.-L., Lee C.-Z., Hsieh P.-F., Tsai S.-F., Wang J.-T.; RT "Characterization of integrative and conjugative element ICEKp1- RT associated genomic heterogeneity in a Klebsiella pneumoniae strain RT isolated from a primary liver abscess."; RL J. Bacteriol. 190:515-526(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AB298504; BAF49490.1; -; Genomic_DNA. DR RefSeq; YP_002920281.1; NC_012731.1. DR ProteinModelPortal; A4GZG0; -. DR STRING; 484021.KP1_3628; -. DR GeneID; 7948864; -. DR KEGG; kpu:KP1_3628; -. DR PATRIC; 20450747; VBIKlePne21779_3173. DR KO; K03199; -. DR OrthoDB; EOG6HMX9P; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 912 AA; 102965 MW; FBED93BA5CDFEFEF CRC64; MAKLLKAMKR PAALWGVPMV PLLAVTGVTI IVAVWTSVAL LFLLPVEFLV MKSLTRNEPM RFNLIAVWLR VKGKPVANRL FGATTLMPVE HEAVDIKEFI DAMKLNQCAT IKKYIPYSSH IHQHVVRSPK SDLYCTWELM GTPFDCESDE SLQFGTNQLH GLIHSFEGMP VTFYIHNDRN TFTDNLHKDS GNPYADEVSR LYYASVGVFR RNRLFLTVCY RPFVSLEKAE RKRMKDSQKL KELDGALLEM LEIKSTLDTA LSRYGARPLG TFTEGSAVFS SQLAFYEYLL THQWRKVRVT RTPAYDVMGA AALFFSAESG QINHANGTQY FRGLEVKEFS EETATGMMDS LLYAPCDYVI TQSYTCMSRE EAKKAIKRTR RLLMSADDDA VSQRLDLDVA LDLLASGKIA YGKHHFSIMV YSPSLESLVA DTNEISNALN NIGITPVPAE ISLSAAYMAQ LPGNYNLRPR KGELSSQNFV ELAALHNFYP GKRDKAPWGD AMALLRTPSG DGYYINLHNT LADKDEFNEK NPASTCILGT NGSGKTMLMT FFEIMQQKYG REDSFSPDAK TKRLTTVYLD KDRGAEMNIR ALGGRYYRVI SGESTGWNPF SLPATKRNIN FIKQLMKILC TRNGSTISPR DERRLSDAVN AVMNDEPQYR VYGITRMLEN LPEPATKEAQ ENGLSIRLSQ WAQGGEFGWV FDNESDTFDI SNCDNFGIDG TEFLDDASVC APISFYLLYR ITSLLDGRRL VIFMDEFWKW LRDPVFKDFA YNKLKTIRKL NGMLVVGTQS PAEIIKDDIA PAVIEQCGTQ ILAANPNADR AHYVDGMKFE LEVFDVVKGL DPQSRQYVVV KNQFKRGDTK RFAARITLDL SGIGRHTKVM SGDAPNLEIF ESIYREGMQP HEWLDTYLAK AL // ID A4JR13_BURVG Unreviewed; 106 AA. AC A4JR13; DT 01-MAY-2007, integrated into UniProtKB/TrEMBL. DT 01-MAY-2007, sequence version 1. DT 14-MAY-2014, entry version 31. DE SubName: Full=Type IV secretory pathway, VirB3 family protein; GN OrderedLocusNames=Bcep1808_5784; OS Burkholderia vietnamiensis (strain G4 / LMG 22486) (Burkholderia OS cepacia (strain R1808)). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia; Burkholderia cepacia complex. OX NCBI_TaxID=269482; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=G4 / LMG 22486; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., RA Larimer F., Land M., Hauser L., Kyrpides N., Tiedje J., Richardson P.; RT "Complete sequence of chromosome 3 of Burkholderia vietnamiensis G4."; RL Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000616; ABO58716.1; -; Genomic_DNA. DR RefSeq; YP_001114971.1; NC_009254.1. DR STRING; 269482.Bcep1808_5784; -. DR EnsemblBacteria; ABO58716; ABO58716; Bcep1808_5784. DR GeneID; 4948688; -. DR KEGG; bvi:Bcep1808_5784; -. DR PATRIC; 19312322; VBIBurVie89221_1181. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; IVGTHIL; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BVIE269482:GJNA-5872-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 106 AA; 11919 MW; 4127AC1162591008 CRC64; MHSLKDPVFK GCTRPAMLWG VPLVPLLMIG GSMLIPAIWA LLASPALGVG ILLLMIPVFV AMRMTTRHDD QRLAQHARRA RMALRQGNRR FWGAHAYVPV RLKRRA // ID A4JUP3_BURVG Unreviewed; 87 AA. AC A4JUP3; DT 01-MAY-2007, integrated into UniProtKB/TrEMBL. DT 01-MAY-2007, sequence version 1. DT 14-MAY-2014, entry version 27. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=Bcep1808_7113; OS Burkholderia vietnamiensis (strain G4 / LMG 22486) (Burkholderia OS cepacia (strain R1808)). OG Plasmid pBVIE02. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia; Burkholderia cepacia complex. OX NCBI_TaxID=269482; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=G4 / LMG 22486; PLASMID=pBVIE02; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., RA Larimer F., Land M., Hauser L., Kyrpides N., Tiedje J., Richardson P.; RT "Complete sequence of plasmid pBVIE02 of Burkholderia vietnamiensis RT G4."; RL Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000618; ABO59996.1; -; Genomic_DNA. DR RefSeq; YP_001109777.1; NC_009227.1. DR STRING; 269482.Bcep1808_7113; -. DR EnsemblBacteria; ABO59996; ABO59996; Bcep1808_7113. DR GeneID; 4947393; -. DR KEGG; bvi:Bcep1808_7113; -. DR PATRIC; 19310308; VBIBurVie89221_0179. DR eggNOG; NOG278684; -. DR HOGENOM; HOG000263306; -. DR OMA; FRRPYGF; -. DR OrthoDB; EOG6WHNT0; -. DR BioCyc; BVIE269482:GJNA-7202-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 87 AA; 9952 MW; 850FA10ECB7D0096 CRC64; MGGADRGLAI ANGTLTTLLC YSSMSLVYLV IGIVVHWVLR WLSSSDPWWK EVLVVYNRYP DVHEPLHTAD FAARFRRPYG FDQELPL // ID A4KVR9_SINMM Unreviewed; 99 AA. AC A4KVR9; DT 01-MAY-2007, integrated into UniProtKB/TrEMBL. DT 01-MAY-2007, sequence version 1. DT 14-MAY-2014, entry version 19. DE SubName: Full=Probable conjugal transfer protein TrbD; GN Name=orf164; OS Sinorhizobium meliloti (strain SM11). OG Plasmid pSmeSM11b. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. OX NCBI_TaxID=707241; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=SM11; PLASMID=pSmeSM11b; RX PubMed=17466030; DOI=10.1111/j.1574-6968.2007.00731.x; RA Stiens M., Schneiker S., Puhler A., Schluter A.; RT "Sequence analysis of the 181-kb accessory plasmid pSmeSM11b, isolated RT from a dominant Sinorhizobium meliloti strain identified during a RT long-term field release experiment."; RL FEMS Microbiol. Lett. 271:297-309(2007). RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=SM11; RX PubMed=21396969; DOI=10.1016/j.jbiotec.2010.12.018; RA Schneiker-Bekel S., Wibberg D., Bekel T., Blom J., Linke B., RA Neuweger H., Stiens M., Vorholter F.J., Weidner S., Goesmann A., RA Puhler A., Schluter A.; RT "The complete genome sequence of the dominant Sinorhizobium meliloti RT field isolate SM11 extends the S. meliloti pan-genome."; RL J. Biotechnol. 155:20-33(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EF066650; ABN47170.1; -; Genomic_DNA. DR RefSeq; YP_001965663.1; NC_010865.1. DR GeneID; 6383497; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 99 AA; 11163 MW; EC8FD55E7BFE930A CRC64; MADAGSGLHR NRIHRALSRP NLLMGADREL VLLTGLAAII LIFVVLTVYS ALFGVAIWIV VVGALRMMAK SDPMMRKVYA RHMRYRAYYL PTSAPWRGY // ID A4X0Q8_RHOS5 Unreviewed; 109 AA. AC A4X0Q8; DT 29-MAY-2007, integrated into UniProtKB/TrEMBL. DT 29-MAY-2007, sequence version 1. DT 13-NOV-2013, entry version 27. DE SubName: Full=Type IV secretory pathway, VirB3 family protein; GN OrderedLocusNames=Rsph17025_4377; OS Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3). OG Plasmid pRSPA04. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Rhodobacter. OX NCBI_TaxID=349102; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 17025 / ATH 2.4.3; PLASMID=pRSPA04; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Schmutz J., RA Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Richardson P., RA Mackenzie C., Choudhary M., Donohue T.J., Kaplan S.; RT "Complete sequence of plasmid pRSPA04 of Rhodobacter sphaeroides ATCC RT 17025."; RL Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000665; ABP73222.1; -; Genomic_DNA. DR RefSeq; YP_001170527.1; NC_009432.1. DR STRING; 349102.Rsph17025_4377; -. DR EnsemblBacteria; ABP73222; ABP73222; Rsph17025_4377. DR GeneID; 5086559; -. DR KEGG; rsq:Rsph17025_4377; -. DR PATRIC; 23167289; VBIRhoSph94549_4519. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; HDHNMFR; -. DR OrthoDB; EOG6VMTNS; -. DR BioCyc; RSPH349102:GHE1-32-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 109 AA; 12233 MW; 697D608F8EE3E6EA CRC64; MEKVKLNEDP LFLALTRPAM IFGIPMEAFA LSCGAAGLAM ISADSILYLL LAVPLLVASR IIVERDQNAF QILFRWLDTS ARCRNRAFWG GTTCSPLRLR RSFKVEEID // ID A5CFA9_ORITB Unreviewed; 95 AA. AC A5CFA9; DT 12-JUN-2007, integrated into UniProtKB/TrEMBL. DT 12-JUN-2007, sequence version 1. DT 14-MAY-2014, entry version 31. DE SubName: Full=Type IV secretion system protein; GN Name=virB3; OrderedLocusNames=OTBS_1949; OS Orientia tsutsugamushi (strain Boryong) (Rickettsia tsutsugamushi). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Orientia. OX NCBI_TaxID=357244; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Boryong; RX PubMed=17483455; DOI=10.1073/pnas.0611553104; RA Cho N.-H., Kim H.-R., Lee J.-H., Kim S.-Y., Kim J., Cha S., Kim S.-Y., RA Darby A.C., Fuxelius H.-H., Yin J., Kim J.H., Kim J., Lee S.J., RA Koh Y.-S., Jang W.-J., Park K.-H., Andersson S.G.E., Choi M.-S., RA Kim I.-S.; RT "The Orientia tsutsugamushi genome reveals massive proliferation of RT conjugative type IV secretion system and host-cell interaction RT genes."; RL Proc. Natl. Acad. Sci. U.S.A. 104:7981-7986(2007). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM494475; CAM81044.1; -; Genomic_DNA. DR RefSeq; YP_001249139.1; NC_009488.1. DR STRING; 357244.OTBS_1949; -. DR EnsemblBacteria; CAM81044; CAM81044; OTBS_1949. DR GeneID; 5218989; -. DR KEGG; ots:OTBS_1949; -. DR PATRIC; 22825409; VBIOriTsu83812_2111. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; OTSU357244:GCA5-1983-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10792 MW; BCE285A904F70905 CRC64; MLGKLEADPL FLGLTRPPMI FGVSLPYALL NIMLSTMYLT VASNFYVVPV SLVVHGVGYL LCFKEPRFME IYLMRAQKFN KCPNRLYYGA NSYGI // ID A5EC27_BRASB Unreviewed; 87 AA. AC A5EC27; DT 12-JUN-2007, integrated into UniProtKB/TrEMBL. DT 12-JUN-2007, sequence version 1. DT 14-MAY-2014, entry version 32. DE SubName: Full=Conjugal transfer protein trbD; GN Name=trbD; OrderedLocusNames=BBta_1502; OS Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Bradyrhizobium. OX NCBI_TaxID=288000; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BTAi1 / ATCC BAA-1182; RX PubMed=17540897; DOI=10.1126/science.1139548; RA Giraud E., Moulin L., Vallenet D., Barbe V., Cytryn E., Avarre J.C., RA Jaubert M., Simon D., Cartieaux F., Prin Y., Bena G., Hannibal L., RA Fardoux J., Kojadinovic M., Vuillet L., Lajus A., Cruveiller S., RA Rouy Z., Mangenot S., Segurens B., Dossat C., Franck W.L., Chang W.S., RA Saunders E., Bruce D., Richardson P., Normand P., Dreyfus B., RA Pignol D., Stacey G., Emerich D., Vermeglio A., Medigue C., RA Sadowsky M.; RT "Legumes symbioses: absence of nod genes in photosynthetic RT bradyrhizobia."; RL Science 316:1307-1312(2007). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000494; ABQ33721.1; -; Genomic_DNA. DR RefSeq; YP_001237627.1; NC_009485.1. DR STRING; 288000.BBta_1502; -. DR EnsemblBacteria; ABQ33721; ABQ33721; BBta_1502. DR GeneID; 5151851; -. DR KEGG; bbt:BBta_1502; -. DR PATRIC; 21203922; VBIBraSp29847_1647. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; ALTEHIM; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; BSP288000:GJBR-1439-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 87 AA; 9452 MW; 0AF53950CFBBEA5A CRC64; MDGQIPGFEA PVHRALTEPI LMGGAPRSIA IVNGTLAAAL GIGLRLWVAG LLLWFVGHMV AVWVTKRDPA FVEVVRRHLR IPGYLNT // ID A5EH21_BRASB Unreviewed; 93 AA. AC A5EH21; DT 12-JUN-2007, integrated into UniProtKB/TrEMBL. DT 12-JUN-2007, sequence version 1. DT 14-MAY-2014, entry version 32. DE SubName: Full=Conjugal transfer protein trbD; GN Name=trbD; OrderedLocusNames=BBta_3366; OS Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Bradyrhizobium. OX NCBI_TaxID=288000; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BTAi1 / ATCC BAA-1182; RX PubMed=17540897; DOI=10.1126/science.1139548; RA Giraud E., Moulin L., Vallenet D., Barbe V., Cytryn E., Avarre J.C., RA Jaubert M., Simon D., Cartieaux F., Prin Y., Bena G., Hannibal L., RA Fardoux J., Kojadinovic M., Vuillet L., Lajus A., Cruveiller S., RA Rouy Z., Mangenot S., Segurens B., Dossat C., Franck W.L., Chang W.S., RA Saunders E., Bruce D., Richardson P., Normand P., Dreyfus B., RA Pignol D., Stacey G., Emerich D., Vermeglio A., Medigue C., RA Sadowsky M.; RT "Legumes symbioses: absence of nod genes in photosynthetic RT bradyrhizobia."; RL Science 316:1307-1312(2007). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000494; ABQ35465.1; -; Genomic_DNA. DR RefSeq; YP_001239371.1; NC_009485.1. DR STRING; 288000.BBta_3366; -. DR EnsemblBacteria; ABQ35465; ABQ35465; BBta_3366. DR GeneID; 5154836; -. DR KEGG; bbt:BBta_3366; -. DR PATRIC; 21207529; VBIBraSp29847_3442. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; WAIGHIA; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; BSP288000:GJBR-3203-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9945 MW; C3EC05A6658C0F3E CRC64; MDAFGQADQS LPGFAITVRR SLTEPILLGG APRAIAILNG TLAAALGLGL RLWIAGLLFW VIGHGAAVWA AKRDPDFVEV VRRHLRIPGH LNV // ID A5ET07_BRASB Unreviewed; 89 AA. AC A5ET07; DT 12-JUN-2007, integrated into UniProtKB/TrEMBL. DT 12-JUN-2007, sequence version 1. DT 14-MAY-2014, entry version 35. DE SubName: Full=Putative conjugal transfer protein trbD; GN OrderedLocusNames=BBta_7442; OS Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Bradyrhizobium. OX NCBI_TaxID=288000; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BTAi1 / ATCC BAA-1182; RX PubMed=17540897; DOI=10.1126/science.1139548; RA Giraud E., Moulin L., Vallenet D., Barbe V., Cytryn E., Avarre J.C., RA Jaubert M., Simon D., Cartieaux F., Prin Y., Bena G., Hannibal L., RA Fardoux J., Kojadinovic M., Vuillet L., Lajus A., Cruveiller S., RA Rouy Z., Mangenot S., Segurens B., Dossat C., Franck W.L., Chang W.S., RA Saunders E., Bruce D., Richardson P., Normand P., Dreyfus B., RA Pignol D., Stacey G., Emerich D., Vermeglio A., Medigue C., RA Sadowsky M.; RT "Legumes symbioses: absence of nod genes in photosynthetic RT bradyrhizobia."; RL Science 316:1307-1312(2007). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000494; ABQ39301.1; -; Genomic_DNA. DR RefSeq; YP_001243207.1; NC_009485.1. DR STRING; 288000.BBta_7442; -. DR EnsemblBacteria; ABQ39301; ABQ39301; BBta_7442. DR GeneID; 5152451; -. DR KEGG; bbt:BBta_7442; -. DR PATRIC; 21215495; VBIBraSp29847_7396. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; HGLAVWA; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; BSP288000:GJBR-7142-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 89 AA; 9504 MW; 974107F68ED8712A CRC64; MEQDGAIAGF YAPVHRALTE PILLGGAPRA VAIVNGTLAA AIGLGLRLWI VGGLIWLVGH IAAVWAAKRD AAFVDVVRRH LRYPQHMVS // ID A5ETU0_BRASB Unreviewed; 166 AA. AC A5ETU0; DT 12-JUN-2007, integrated into UniProtKB/TrEMBL. DT 12-JUN-2007, sequence version 1. DT 14-MAY-2014, entry version 29. DE SubName: Full=Conjugal transfer protein TrbD; GN OrderedLocusNames=BBta_7743; OS Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Bradyrhizobium. OX NCBI_TaxID=288000; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BTAi1 / ATCC BAA-1182; RX PubMed=17540897; DOI=10.1126/science.1139548; RA Giraud E., Moulin L., Vallenet D., Barbe V., Cytryn E., Avarre J.C., RA Jaubert M., Simon D., Cartieaux F., Prin Y., Bena G., Hannibal L., RA Fardoux J., Kojadinovic M., Vuillet L., Lajus A., Cruveiller S., RA Rouy Z., Mangenot S., Segurens B., Dossat C., Franck W.L., Chang W.S., RA Saunders E., Bruce D., Richardson P., Normand P., Dreyfus B., RA Pignol D., Stacey G., Emerich D., Vermeglio A., Medigue C., RA Sadowsky M.; RT "Legumes symbioses: absence of nod genes in photosynthetic RT bradyrhizobia."; RL Science 316:1307-1312(2007). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000494; ABQ39584.1; -; Genomic_DNA. DR RefSeq; YP_001243490.1; NC_009485.1. DR STRING; 288000.BBta_7743; -. DR EnsemblBacteria; ABQ39584; ABQ39584; BBta_7743. DR GeneID; 5149702; -. DR KEGG; bbt:BBta_7743; -. DR PATRIC; 21216095; VBIBraSp29847_7694. DR eggNOG; COG5268; -. DR HOGENOM; HOG000274208; -. DR KO; K03198; -. DR OMA; RYERRLP; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; BSP288000:GJBR-7429-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 166 AA; 18285 MW; 3E5A3A793D74F6ED CRC64; MGAAASADPA IDRRPGGQGH RGDHHHRHWP DARLRRYERR LPQARADRLW PVDRIRSQLL LPELLQLRRW GGGVMAGVLE TAEVPGFSVP VHRALTEPIL LGGAPRSIAI LNGTLAAALG LGLRLWLVGL GLWAVGHFAA VWAAKRDPMF VEVTRRHLRI PGFLGV // ID A5EUQ0_BRASB Unreviewed; 112 AA. AC A5EUQ0; DT 12-JUN-2007, integrated into UniProtKB/TrEMBL. DT 12-JUN-2007, sequence version 1. DT 14-MAY-2014, entry version 30. DE SubName: Full=Type IV secretory pathway AvhB3 protein; GN Name=avhB3; OrderedLocusNames=BBta_p0256; OS Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182). OG Plasmid pBBta01. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Bradyrhizobium. OX NCBI_TaxID=288000; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BTAi1 / ATCC BAA-1182; PLASMID=pBBta01; RX PubMed=17540897; DOI=10.1126/science.1139548; RA Giraud E., Moulin L., Vallenet D., Barbe V., Cytryn E., Avarre J.C., RA Jaubert M., Simon D., Cartieaux F., Prin Y., Bena G., Hannibal L., RA Fardoux J., Kojadinovic M., Vuillet L., Lajus A., Cruveiller S., RA Rouy Z., Mangenot S., Segurens B., Dossat C., Franck W.L., Chang W.S., RA Saunders E., Bruce D., Richardson P., Normand P., Dreyfus B., RA Pignol D., Stacey G., Emerich D., Vermeglio A., Medigue C., RA Sadowsky M.; RT "Legumes symbioses: absence of nod genes in photosynthetic RT bradyrhizobia."; RL Science 316:1307-1312(2007). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000495; ABQ39894.1; -; Genomic_DNA. DR RefSeq; YP_001220566.1; NC_009475.1. DR STRING; 288000.BBta_p0256; -. DR EnsemblBacteria; ABQ39894; ABQ39894; BBta_p0256. DR GeneID; 5148651; -. DR KEGG; bbt:BBta_p0256; -. DR PATRIC; 21200941; VBIBraSp29847_0176. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; HDHNMFR; -. DR OrthoDB; EOG6VMTNS; -. DR BioCyc; BSP288000:GJBR-7772-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 112 AA; 12495 MW; 5737D6F636266C65 CRC64; MIEAARLTED TLFLACTRPA MIAGVTMEAM ALNVMFSCIL FLVAGSIIYG LVAIPIHGLC RIICRHDPNM FRILLAWIET RGRTRNASFW GGSSCTPLKL VRRYQARDLG YA // ID A5FU40_ACICJ Unreviewed; 110 AA. AC A5FU40; DT 12-JUN-2007, integrated into UniProtKB/TrEMBL. DT 12-JUN-2007, sequence version 1. DT 14-MAY-2014, entry version 31. DE SubName: Full=Type IV secretory pathway, VirB3 family protein; GN OrderedLocusNames=Acry_3522; OS Acidiphilium cryptum (strain JF-5). OG Plasmid pACRY03. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Acetobacteraceae; Acidiphilium. OX NCBI_TaxID=349163; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=JF-5; PLASMID=pACRY03; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Sims D., Brettin T., Bruce D., Han C., Schmutz J., RA Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Magnuson T., RA Richardson P.; RT "Complete sequence of plasmid3 pACRY03 of Acidiphilium cryptum JF-5."; RL Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000691; ABQ29122.1; -; Genomic_DNA. DR RefSeq; YP_001220264.1; NC_009469.1. DR STRING; 349163.Acry_3522; -. DR EnsemblBacteria; ABQ29122; ABQ29122; Acry_3522. DR GeneID; 5159302; -. DR KEGG; acr:Acry_3522; -. DR PATRIC; 20644726; VBIAciCry6074_0375. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; RDYNAAS; -. DR OrthoDB; EOG6HJ293; -. DR BioCyc; ACRY349163:GHET-3576-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 110 AA; 12267 MW; EDDF3AB641C31522 CRC64; MTERQRDPLF VAATRPALFL GLPIEMAVVI IMIAAMIVIF GHNPFYLTLV LPLWFGARCL VRYDYNAPRV AWLWFRTKAT GAGENQAWGG ASPAPFPMKV QQGRGMRDAG // ID A5I9X1_LEGPC Unreviewed; 99 AA. AC A5I9X1; DT 26-JUN-2007, integrated into UniProtKB/TrEMBL. DT 26-JUN-2007, sequence version 1. DT 14-MAY-2014, entry version 29. DE SubName: Full=Conjugal transfer protein trbD; GN Name=trbD; OrderedLocusNames=LPC_0172; OS Legionella pneumophila (strain Corby). OC Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; OC Legionellaceae; Legionella. OX NCBI_TaxID=400673; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Corby; RA Gloeckner G., Albert-Weissenberger C., Weinmann E., Jacobi S., RA Schunder E., Steinert M., Buchrieser C., Hacker J., Heuner K.; RT "Identification and characterization of a new conjugation/ type IVA RT secretion system (trb/tra) of L. pneumophila Corby localized on a RT mobile genomic island."; RL Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000675; ABQ54171.1; -; Genomic_DNA. DR RefSeq; YP_001249517.1; NC_009494.2. DR STRING; 400673.LPC_0172; -. DR EnsemblBacteria; ABQ54171; ABQ54171; LPC_0172. DR GeneID; 5181976; -. DR KEGG; lpc:LPC_0172; -. DR PATRIC; 22306673; VBILegPne45588_0179. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; LRMMAKS; -. DR OrthoDB; EOG6N6849; -. DR BioCyc; LPNE400673:GCIT-172-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 99 AA; 11411 MW; F0F221859B8DF442 CRC64; MSLRTIPIRK CGNRPNLFLG GDRELVMFSG LLSAILVFAA QDWLAAIAGM VMWFLSLKGL RLMAKSDPFM RAIYLRQRSY QAYYAPRSTP FRENKRGYQ // ID A5IH61_LEGPC Unreviewed; 81 AA. AC A5IH61; DT 26-JUN-2007, integrated into UniProtKB/TrEMBL. DT 26-JUN-2007, sequence version 1. DT 14-MAY-2014, entry version 32. DE SubName: Full=Conjugal transfer protein trbD; GN Name=trbD; OrderedLocusNames=LPC_2810; OS Legionella pneumophila (strain Corby). OC Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; OC Legionellaceae; Legionella. OX NCBI_TaxID=400673; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Corby; RA Gloeckner G., Albert-Weissenberger C., Weinmann E., Jacobi S., RA Schunder E., Steinert M., Buchrieser C., Hacker J., Heuner K.; RT "Identification and characterization of a new conjugation/ type IVA RT secretion system (trb/tra) of L. pneumophila Corby localized on a RT mobile genomic island."; RL Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000675; ABQ56711.1; -; Genomic_DNA. DR RefSeq; YP_001252057.3; NC_009494.2. DR STRING; 400673.LPC_2810; -. DR EnsemblBacteria; ABQ56711; ABQ56711; LPC_2810. DR GeneID; 5182588; -. DR KEGG; lpc:LPC_2810; -. DR PATRIC; 22312205; VBILegPne45588_2906. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; AKSDPYM; -. DR BioCyc; LPNE400673:GCIT-602-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 81 AA; 9383 MW; 9ABF27D3DB8A39DF CRC64; MGGDRELVMF SGLLSAILVF AAQDWLAAIA GIVMWFLSLK GLRLMAKSDP YMRAVYLRQR RYQAYYPARS TPFRENKRGY Q // ID A5PB32_9SPHN Unreviewed; 94 AA. AC A5PB32; DT 10-JUL-2007, integrated into UniProtKB/TrEMBL. DT 10-JUL-2007, sequence version 1. DT 03-APR-2013, entry version 7. DE SubName: Full=Type IV secretion system protein B3, putative; GN ORFNames=ED21_23656; OS Erythrobacter sp. SD-21. OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Erythrobacteraceae; Erythrobacter. OX NCBI_TaxID=161528; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=SD-21; RA Tebo B., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G., RA Rogers Y.-H., Friedman R., Frazier M., Venter J.C.; RL Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ABCG01000004; EDL48780.1; -; Genomic_DNA. DR EnsemblBacteria; EDL48780; EDL48780; ED21_23656. DR PATRIC; 30322317; VBIErySp11529_1585. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 94 AA; 10649 MW; A8299A8D33DA58CE CRC64; MTALVRHPVH RALTRPQMFA GVTLNYFVIN GIVTTEVFLI TGSFWALLAA LVMHGVGYFA CLREPRIFDL WITKVSKCPR VANYKRWGCN SYAA // ID A5PEQ2_9SPHN Unreviewed; 91 AA. AC A5PEQ2; DT 10-JUL-2007, integrated into UniProtKB/TrEMBL. DT 10-JUL-2007, sequence version 1. DT 03-APR-2013, entry version 7. DE SubName: Full=Type IV secretion system protein B3, putative; GN ORFNames=ED21_23393; OS Erythrobacter sp. SD-21. OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Erythrobacteraceae; Erythrobacter. OX NCBI_TaxID=161528; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=SD-21; RA Tebo B., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G., RA Rogers Y.-H., Friedman R., Frazier M., Venter J.C.; RL Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ABCG01000013; EDL47718.1; -; Genomic_DNA. DR EnsemblBacteria; EDL47718; EDL47718; ED21_23393. DR PATRIC; 30324835; VBIErySp11529_2816. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 91 AA; 10647 MW; 2328F3C057CED985 CRC64; MNQDAVFVAL TRPQMFAGVT FTFFVINAIL AVELFLIFRA WWVILIALAV HALGVLACLR EARIFDLWLT KVRTCPRVKN YRLWRCNSYR P // ID A5TXM0_FUSNP Unreviewed; 87 AA. AC A5TXM0; DT 10-JUL-2007, integrated into UniProtKB/TrEMBL. DT 10-JUL-2007, sequence version 1. DT 22-JAN-2014, entry version 12. DE SubName: Full=Putative uncharacterized protein; GN ORFNames=FNP_1874; OS Fusobacterium nucleatum subsp. polymorphum ATCC 10953. OC Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; OC Fusobacterium. OX NCBI_TaxID=393480; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 10953; RA Qin X., Weinstock G.M.; RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 10953; RA Karpathy S.E., Xiang Q., Gioia J., Jiang H., Liu Y., Petrosino J.F., RA Yerrapragada S., Fox G.E., Kinder Haake S., Weinstock G.M., RA Highlander S.K.; RT "Genome sequence of Fusobacterium nucleatum subspecies polymorphum - a RT genetically tractable Fusobacterium."; RL Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM000440; EDK89645.1; -; Genomic_DNA. DR EnsemblBacteria; EDK89645; EDK89645; FNP_1874. DR PATRIC; 30267437; VBIFusNuc113593_1479. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 87 AA; 10097 MW; E336C1C4FEE49E5A CRC64; MEELDLREKI CRAFTTDITV AGGAREAVIG NFFLALILIF STDSGLVVLI VIILFTFSHG YLVYLTKKDT KFFKVFRSHL KFKEYYY // ID A5V2L8_SPHWW Unreviewed; 88 AA. AC A5V2L8; DT 10-JUL-2007, integrated into UniProtKB/TrEMBL. DT 10-JUL-2007, sequence version 1. DT 14-MAY-2014, entry version 32. DE SubName: Full=Type IV secretory pathway TrbD component-like protein; GN OrderedLocusNames=Swit_0163; OS Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273). OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Sphingomonas. OX NCBI_TaxID=392499; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=RW1 / DSM 6014 / JCM 10273; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., RA Detter J.C., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., RA Land M., Hauser L., Kyrpides N., Kim E., Halden R.U., Miller T.R., RA Salzberg S.L., Eisen J.A., Richardson P.; RT "Complete sequence of chromosome of Sphingomonas wittichii RW1."; RL Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000699; ABQ66534.1; -; Genomic_DNA. DR RefSeq; YP_001260672.1; NC_009511.1. DR STRING; 392499.Swit_0163; -. DR EnsemblBacteria; ABQ66534; ABQ66534; Swit_0163. DR GeneID; 5197042; -. DR KEGG; swi:Swit_0163; -. DR PATRIC; 23679286; VBISphWit55028_0617. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; AVWATKR; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; SWIT392499:GHZK-167-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 88 AA; 9215 MW; E773F0724DFD67BB CRC64; MGEEDLPGFA VPVHRALAEP IMLAGAPRAL AIFNGTLAAA VGIGLRLWIA GIVIAIVGHG LAVFAARRDP QILPVARRHM ALPTLFES // ID A5VCM3_SPHWW Unreviewed; 93 AA. AC A5VCM3; DT 10-JUL-2007, integrated into UniProtKB/TrEMBL. DT 10-JUL-2007, sequence version 1. DT 14-MAY-2014, entry version 34. DE SubName: Full=Type IV secretory pathway, VirB3 family protein; GN OrderedLocusNames=Swit_3693; OS Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273). OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Sphingomonas. OX NCBI_TaxID=392499; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=RW1 / DSM 6014 / JCM 10273; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., RA Detter J.C., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., RA Land M., Hauser L., Kyrpides N., Kim E., Halden R.U., Miller T.R., RA Salzberg S.L., Eisen J.A., Richardson P.; RT "Complete sequence of chromosome of Sphingomonas wittichii RW1."; RL Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000699; ABQ70039.1; -; Genomic_DNA. DR RefSeq; YP_001264177.1; NC_009511.1. DR STRING; 392499.Swit_3693; -. DR EnsemblBacteria; ABQ70039; ABQ70039; Swit_3693. DR GeneID; 5200335; -. DR KEGG; swi:Swit_3693; -. DR PATRIC; 23686653; VBISphWit55028_4258. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; PGLVLWI; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; SWIT392499:GHZK-3739-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9974 MW; 322F6D666FB5DCBE CRC64; MTGAADPVEP IAGYFAPVHR ALTEPILLGG APRSLAIVNG TLAGAIGLGL RLWIAGLAIW AIGHALSVWA ARRDPQFVDV ARRHLRYPAW MRP // ID A5VH58_SPHWW Unreviewed; 111 AA. AC A5VH58; DT 10-JUL-2007, integrated into UniProtKB/TrEMBL. DT 10-JUL-2007, sequence version 1. DT 14-MAY-2014, entry version 31. DE SubName: Full=Type IV secretory pathway, VirB3 family protein; GN OrderedLocusNames=Swit_5008; OS Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273). OG Plasmid pSWIT02. OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Sphingomonas. OX NCBI_TaxID=392499; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=RW1 / DSM 6014 / JCM 10273; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., RA Detter J.C., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., RA Land M., Hauser L., Kyrpides N., Kim E., Halden R.U., Miller T.R., RA Salzberg S.L., Eisen J.A., Richardson P.; RT "Complete sequence of plasmid pSWIT02 of Sphingomonas wittichii RW1."; RL Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000701; ABQ71624.1; -; Genomic_DNA. DR RefSeq; YP_001260391.1; NC_009508.1. DR STRING; 392499.Swit_5008; -. DR EnsemblBacteria; ABQ71624; ABQ71624; Swit_5008. DR GeneID; 5195889; -. DR KEGG; swi:Swit_5008; -. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; TIGIAMH; -. DR OrthoDB; EOG6VMTNS; -. DR BioCyc; SWIT392499:GHZK-5351-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 111 AA; 12307 MW; 88599675D665E1B6 CRC64; MDDEKLREET LFLAVTRPTM WLGVPIEASL PIALAACLTL IITGNPLYAF ALAGAILAIA RLIVRHDANA FRLLWLWTMT KARCRNRGWW GGSSYSPLPI DGAKRRGFAH G // ID A5VTI7_BRUO2 Unreviewed; 128 AA. AC A5VTI7; DT 10-JUL-2007, integrated into UniProtKB/TrEMBL. DT 10-JUL-2007, sequence version 1. DT 14-MAY-2014, entry version 33. DE SubName: Full=Type IV secretion system protein VirB3; GN OrderedLocusNames=BOV_A0061; OS Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=444178; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 25840 / 63/290 / NCTC 10512; RA Paulsen I.; RL Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000709; ABQ62064.1; -; Genomic_DNA. DR RefSeq; YP_001257142.1; NC_009504.1. DR STRING; 444178.BOV_A0061; -. DR EnsemblBacteria; ABQ62064; ABQ62064; BOV_A0061. DR GeneID; 5203799; -. DR KEGG; bov:BOV_A0061; -. DR PATRIC; 17857237; VBIBruOvi136990_0071. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; FWGASSY; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BOVI444178:GH2V-2156-MONOMER; -. DR PRO; PR:A5VTI7; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 128 AA; 14325 MW; 3ACAC4A8D323E77D CRC64; MPLTCLGKGT QIMTTAPQES NARSAGYRGD PIFKGCTRPA MLFGVPVIPL VIVGGSIVLL SVWISMFILP LIVPIVLVMR QITQTDDQMF RLLGLKAQFR LIHFNRTGRF WRASAYSPIA FTKRKRES // ID A5WY02_RHIRD Unreviewed; 99 AA. AC A5WY02; DT 10-JUL-2007, integrated into UniProtKB/TrEMBL. DT 10-JUL-2007, sequence version 1. DT 14-MAY-2014, entry version 14. DE SubName: Full=TrbD; GN Name=trbD; ORFNames=pTiBo082; OS Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium OS radiobacter). OG Plasmid Ti plasmid pTiBo542. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=358; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Bo542; PLASMID=Ti plasmid pTiBo542; RA Oger P.M., Farrand S.K., Olsen G.J., Reich C.; RT "Complete sequence of the Ti plasmid pTiBo542 from the supervirulent RT Agrobacterium tumefaciens strain Bo542."; RL Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DQ058764; AAZ50470.1; -; Genomic_DNA. DR RefSeq; YP_001967483.1; NC_010929.1. DR GeneID; 6382100; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 99 AA; 11148 MW; C94150B44BF40B2D CRC64; MADAGSSLAR SRVHRALSRP NLLMGADREL VLLTALAAII LIFVVLTWYA ALFGIAVWLV AVAALRMMAK ADPLMRRVYL RHISYRTSYR ATSSPWRKF // ID A5WY52_RHIRD Unreviewed; 108 AA. AC A5WY52; DT 10-JUL-2007, integrated into UniProtKB/TrEMBL. DT 10-JUL-2007, sequence version 1. DT 14-MAY-2014, entry version 11. DE SubName: Full=VirB3; GN Name=virB3; ORFNames=pTiBo135; OS Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium OS radiobacter). OG Plasmid Ti plasmid pTiBo542. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=358; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Bo542; PLASMID=Ti plasmid pTiBo542; RA Oger P.M., Farrand S.K., Olsen G.J., Reich C.; RT "Complete sequence of the Ti plasmid pTiBo542 from the supervirulent RT Agrobacterium tumefaciens strain Bo542."; RL Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DQ058764; AAZ50520.1; -; Genomic_DNA. DR RefSeq; YP_001967533.1; NC_010929.1. DR GeneID; 6381980; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 108 AA; 11775 MW; CCC0B1E8C9D3F355 CRC64; MADRLEESTL YLAATRPALF LGVPLTLAGL FMMFAGFVIV IVQNPLYEVV LVPLWFAARL IVERDYNAAS VVLLFLRTAG RSIDSAVWGG ATVSPNPIRV PPRGRGMV // ID A6E5M3_9RHOB Unreviewed; 92 AA. AC A6E5M3; DT 24-JUL-2007, integrated into UniProtKB/TrEMBL. DT 24-JUL-2007, sequence version 1. DT 03-APR-2013, entry version 6. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=RTM1035_00690; OS Roseovarius sp. TM1035. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Roseovarius. OX NCBI_TaxID=391613; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=TM1035; RA Belas R., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G., RA Rogers Y.-H., Friedman R., Frazier M., Venter J.C.; RL Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ABCL01000010; EDM30134.1; -; Genomic_DNA. DR EnsemblBacteria; EDM30134; EDM30134; RTM1035_00690. DR PATRIC; 28160405; VBIRosSp37286_3830. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 92 AA; 10382 MW; 4A85F14DCF495D4D CRC64; MAERSPLFLG LVRPPKLLGL PIMYAMVWLF GSVLLFVWVQ HIAVLGFAAL LYPVLWKAAD WDPRFIDVMM TALQETPPTR NRSIHGGDSY AP // ID A6GUR5_9BURK Unreviewed; 95 AA. AC A6GUR5; DT 24-JUL-2007, integrated into UniProtKB/TrEMBL. DT 24-JUL-2007, sequence version 1. DT 03-APR-2013, entry version 9. DE SubName: Full=Conjugal transfer protein; GN ORFNames=LMED105_00115; OS Limnobacter sp. MED105. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Limnobacter. OX NCBI_TaxID=391597; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MED105; RA Pinhassi J., Pedros-Alio C., Ferriera S., Johnson J., Kravitz S., RA Beeson K., Sutton G., Rogers Y.-H., Friedman R., Frazier M., RA Venter J.C.; RL Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ABCT01000028; EDM82104.1; -; Genomic_DNA. DR EnsemblBacteria; EDM82104; EDM82104; LMED105_00115. DR PATRIC; 27466665; VBILimSp111806_3088. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 95 AA; 10387 MW; 241D4A430CADB125 CRC64; MHQSLIRPVL LGGAERGLAL MNGVISAALI FGIGSWQAAV IGIGFALIVH MVLVNLAKQD CQFFDVYKRH ITYQDFYPAQ ASQSAPAPLI KYLNK // ID A6H942_9ZZZZ Unreviewed; 103 AA. AC A6H942; DT 24-JUL-2007, integrated into UniProtKB/TrEMBL. DT 24-JUL-2007, sequence version 1. DT 14-MAY-2014, entry version 15. DE SubName: Full=TrbD protein; GN Name=trbD; OS Birmingham IncP-alpha plasmid. OG Plasmid Birmingham IncP-alpha plasmid. OC other sequences; plasmids. OX NCBI_TaxID=35419; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=RK2; PLASMID=Birmingham IncP-alpha plasmid; RX PubMed=8014987; DOI=10.1006/jmbi.1994.1404; RA Pansegrau W., Lanka E., Barth P.T., Figurski D.H., Guiney D.G., RA Haas D., Helinski D.R., Schwab H., Stanisich V.A., Thomas C.M.; RT "Complete nucleotide sequence of Birmingham IncP alpha plasmids. RT Compilation and comparative analysis."; RL J. Mol. Biol. 239:623-663(1994). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=RK2; PLASMID=Birmingham IncP-alpha plasmid; RX PubMed=17320955; DOI=10.1016/j.plasmid.2007.01.001; RA Haines A.S., Jones K., Batt S., Thomas C.M.; RT "Sequence of plasmid pBS228 and reconstruction of the IncP-1alpha RT phylogeny."; RL Plasmid 58:76-83(2007). CC -!- MISCELLANEOUS: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ third party annotation (TPA) entry. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; BN000925; CAJ85690.1; -; Genomic_DNA. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 12085 MW; C1D63A178E30DEF7 CRC64; MALRTIPIRR AGNRENLFMG GDRELVMFSG LMAFALIFSA QELRATVVGL ILWFGALYAF RIMAKADPKM RFVYLRHRRY KPYYPARSTP FRENTNSQGK QYR // ID A6UKG7_SINMW Unreviewed; 98 AA. AC A6UKG7; DT 21-AUG-2007, integrated into UniProtKB/TrEMBL. DT 21-AUG-2007, sequence version 1. DT 14-MAY-2014, entry version 29. DE SubName: Full=Conjugal transfer TrbD family protein; GN OrderedLocusNames=Smed_5378; OS Sinorhizobium medicae (strain WSM419) (Ensifer medicae). OG Plasmid pSMED02. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. OX NCBI_TaxID=366394; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=WSM419; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., RA Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Mikhailova N., Reeve W.G., Richardson P.; RT "Complete sequence of Sinorhizobium medicae WSM419 plasmid pSMED02."; RL Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000740; ABR64147.1; -; Genomic_DNA. DR RefSeq; YP_001314080.1; NC_009621.1. DR STRING; 366394.Smed_5378; -. DR EnsemblBacteria; ABR64147; ABR64147; Smed_5378. DR GeneID; 5319680; -. DR KEGG; smd:Smed_5378; -. DR PATRIC; 23616400; VBISinMed134228_1870. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; LRMMAKS; -. DR OrthoDB; EOG6N6849; -. DR BioCyc; SMED366394:GJAL-5440-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 98 AA; 11108 MW; 2852A129E118428E CRC64; MSNSLGLQRN RVHRALSRPN LLMGADRELV LITGLAAVIL IFVVLTIYSA LFGVAVWIVI VGFLRMMAKS DPLMRQVYLR HISYKPYYGA TSSPWRRS // ID A6UMA6_SINMW Unreviewed; 108 AA. AC A6UMA6; DT 21-AUG-2007, integrated into UniProtKB/TrEMBL. DT 21-AUG-2007, sequence version 1. DT 14-MAY-2014, entry version 27. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Smed_6160; OS Sinorhizobium medicae (strain WSM419) (Ensifer medicae). OG Plasmid pSMED02. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. OX NCBI_TaxID=366394; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=WSM419; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., RA Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Mikhailova N., Reeve W.G., Richardson P.; RT "Complete sequence of Sinorhizobium medicae WSM419 plasmid pSMED02."; RL Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000740; ABR64786.1; -; Genomic_DNA. DR RefSeq; YP_001314719.1; NC_009621.1. DR STRING; 366394.Smed_6160; -. DR EnsemblBacteria; ABR64786; ABR64786; Smed_6160. DR GeneID; 5320462; -. DR KEGG; smd:Smed_6160; -. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; RDYNAAS; -. DR OrthoDB; EOG6HJ293; -. DR BioCyc; SMED366394:GJAL-6221-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 108 AA; 11767 MW; 5FCE6EAE4B77864F CRC64; MSDRLEESTL YVAATRPALF LGVPLNLAAL LMMLAGLIIV VVQNPLYEII LVPLWFGSRV VVERDYNAAS VALLYLRTAG RSVDAPFWGG ASVSPNPIKV PRRGRGML // ID A6UMV5_SINMW Unreviewed; 99 AA. AC A6UMV5; DT 21-AUG-2007, integrated into UniProtKB/TrEMBL. DT 21-AUG-2007, sequence version 1. DT 14-MAY-2014, entry version 29. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Smed_6406; OS Sinorhizobium medicae (strain WSM419) (Ensifer medicae). OG Plasmid pSMED03. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. OX NCBI_TaxID=366394; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=WSM419; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., RA Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Mikhailova N., Reeve W.G., Richardson P.; RT "Complete sequence of Sinorhizobium medicae WSM419 plasmid pSMED03."; RL Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000741; ABR64985.1; -; Genomic_DNA. DR RefSeq; YP_001314918.1; NC_009622.1. DR STRING; 366394.Smed_6406; -. DR EnsemblBacteria; ABR64985; ABR64985; Smed_6406. DR GeneID; 5320709; -. DR KEGG; smd:Smed_6406; -. DR PATRIC; 23618516; VBISinMed134228_2930. DR eggNOG; NOG148097; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; VPYMAVV; -. DR OrthoDB; EOG6ND0NX; -. DR BioCyc; SMED366394:GJAL-6468-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 99 AA; 11033 MW; 50B825EA25D23B8C CRC64; MSEFQDEKPA LTPLVIGLTR SPTLWGVPYM AVVLIVGVTI IGWLATNDLL ALLIAPVAYL VLFSLCTWDI RILDVMQVTS RKTPRTPNKR FWGTNSYGP // ID A6V7M3_PSEA7 Unreviewed; 90 AA. AC A6V7M3; DT 21-AUG-2007, integrated into UniProtKB/TrEMBL. DT 21-AUG-2007, sequence version 1. DT 14-MAY-2014, entry version 33. DE SubName: Full=Conjugal transfer protein; GN OrderedLocusNames=PSPA7_3704; OS Pseudomonas aeruginosa (strain PA7). OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. OX NCBI_TaxID=381754; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=PA7; RA Dodson R.J., Harkins D., Paulsen I.T.; RL Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000744; ABR85167.1; -; Genomic_DNA. DR RefSeq; YP_001349058.1; NC_009656.1. DR STRING; 381754.PSPA7_3704; -. DR EnsemblBacteria; ABR85167; ABR85167; PSPA7_3704. DR GeneID; 5355766; -. DR KEGG; pap:PSPA7_3704; -. DR PATRIC; 19829058; VBIPseAer80442_3536. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; WAIGHIA; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; PAER381754:GHMY-3704-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 90 AA; 9633 MW; FE906954C9653609 CRC64; MSAPDTFADG FEVPLHRSLT EPILLGGAPR TVAIANGTLA AAVGLGLQLW IPGMVLWIVG HSLAVWGARV DPQFMAVFAR HIKHRPLLDV // ID A6WWP7_OCHA4 Unreviewed; 113 AA. AC A6WWP7; DT 21-AUG-2007, integrated into UniProtKB/TrEMBL. DT 21-AUG-2007, sequence version 1. DT 14-MAY-2014, entry version 30. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Oant_0676; OS Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Ochrobactrum. OX NCBI_TaxID=439375; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 49188 / DSM 6882 / NCTC 12168; RX PubMed=21685287; DOI=10.1128/JB.05335-11; RA Chain P.S., Lang D.M., Comerci D.J., Malfatti S.A., Vergez L.M., RA Shin M., Ugalde R.A., Garcia E., Tolmasky M.E.; RT "Genome of Ochrobactrum anthropi ATCC 49188 T, a versatile RT opportunistic pathogen and symbiont of several eukaryotic hosts."; RL J. Bacteriol. 193:4274-4275(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000758; ABS13401.1; -; Genomic_DNA. DR RefSeq; YP_001369230.1; NC_009667.1. DR STRING; 439375.Oant_0676; -. DR EnsemblBacteria; ABS13401; ABS13401; Oant_0676. DR GeneID; 5378508; -. DR KEGG; oan:Oant_0676; -. DR PATRIC; 20466375; VBIOchAnt73124_0712. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; HDHNMFR; -. DR OrthoDB; EOG6VMTNS; -. DR BioCyc; OANT439375:GJIT-682-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 113 AA; 12700 MW; 8591B2B66CD2FF5F CRC64; MTSVEPILEE DTLFLACTRP AMVAGVTMEA MGINVMATTI FYLLAGSISY ALVGIVFHFV FRALIRHDHN MFRIVLAWVD TRGRSRNSGY WGGATLSPLC LIRRYDERDL NLA // ID A6X3W8_OCHA4 Unreviewed; 93 AA. AC A6X3W8; DT 21-AUG-2007, integrated into UniProtKB/TrEMBL. DT 21-AUG-2007, sequence version 1. DT 14-MAY-2014, entry version 31. DE SubName: Full=Conjugal transfer protein TrbB; GN OrderedLocusNames=Oant_3214; OS Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Ochrobactrum. OX NCBI_TaxID=439375; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 49188 / DSM 6882 / NCTC 12168; RX PubMed=21685287; DOI=10.1128/JB.05335-11; RA Chain P.S., Lang D.M., Comerci D.J., Malfatti S.A., Vergez L.M., RA Shin M., Ugalde R.A., Garcia E., Tolmasky M.E.; RT "Genome of Ochrobactrum anthropi ATCC 49188 T, a versatile RT opportunistic pathogen and symbiont of several eukaryotic hosts."; RL J. Bacteriol. 193:4274-4275(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000759; ABS15922.1; -; Genomic_DNA. DR RefSeq; YP_001371751.1; NC_009668.1. DR STRING; 439375.Oant_3214; -. DR EnsemblBacteria; ABS15922; ABS15922; Oant_3214. DR GeneID; 5381531; -. DR KEGG; oan:Oant_3214; -. DR PATRIC; 20471792; VBIOchAnt73124_3369. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; WAIGHIA; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; OANT439375:GJIT-3273-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9747 MW; 2CED75DD295EA989 CRC64; MAVSFEALDA VPGFSVPVHR ALTEPILLGG APRSVAILNG TLAGAVGLGL QLWLAGILIW AVGHIAAVWA AKRDPLFVEV ARRHLRIPGH LSV // ID A6X7P6_OCHA4 Unreviewed; 99 AA. AC A6X7P6; DT 21-AUG-2007, integrated into UniProtKB/TrEMBL. DT 21-AUG-2007, sequence version 1. DT 14-MAY-2014, entry version 32. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Oant_4563; OS Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168). OG Plasmid pOANT01. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Ochrobactrum. OX NCBI_TaxID=439375; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 49188 / DSM 6882 / NCTC 12168; PLASMID=pOANT01; RX PubMed=21685287; DOI=10.1128/JB.05335-11; RA Chain P.S., Lang D.M., Comerci D.J., Malfatti S.A., Vergez L.M., RA Shin M., Ugalde R.A., Garcia E., Tolmasky M.E.; RT "Genome of Ochrobactrum anthropi ATCC 49188 T, a versatile RT opportunistic pathogen and symbiont of several eukaryotic hosts."; RL J. Bacteriol. 193:4274-4275(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000760; ABS17250.1; -; Genomic_DNA. DR RefSeq; YP_001373079.1; NC_009669.1. DR STRING; 439375.Oant_4563; -. DR EnsemblBacteria; ABS17250; ABS17250; Oant_4563. DR GeneID; 5383046; -. DR KEGG; oan:Oant_4563; -. DR PATRIC; 20474549; VBIOchAnt73124_4734. DR eggNOG; bactNOG84158; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; VPYMAVV; -. DR OrthoDB; EOG6ND0NX; -. DR BioCyc; OANT439375:GJIT-4638-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 99 AA; 11146 MW; 5057EEE12383901B CRC64; MAEYEDVKPQ LTPLVIGLTR SPTMWGVPYM AVVVVIGITI IAWLVSKSFW TLLLAPISYV VLFSLCAWDN KILDVLEVTA RKTPRTRNKS FWGTNSYGP // ID A7FC35_YERP3 Unreviewed; 104 AA. AC A7FC35; DT 11-SEP-2007, integrated into UniProtKB/TrEMBL. DT 11-SEP-2007, sequence version 1. DT 14-MAY-2014, entry version 34. DE SubName: Full=Conjugal transfer protein TrbD; GN OrderedLocusNames=YpsIP31758_A0049; OS Yersinia pseudotuberculosis serotype O:1b (strain IP 31758). OG Plasmid pYpsIP31758.2. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Yersinia. OX NCBI_TaxID=349747; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=IP 31758; RX PubMed=17784789; DOI=10.1371/journal.pgen.0030142; RA Eppinger M., Rosovitz M.J., Fricke W.F., Rasko D.A., Kokorina G., RA Fayolle C., Lindler L.E., Carniel E., Ravel J.; RT "The complete genome sequence of Yersinia pseudotuberculosis IP31758, RT the causative agent of Far East scarlet-like fever."; RL PLoS Genet. 3:1508-1523(2007). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000718; ABS45606.1; -; Genomic_DNA. DR RefSeq; YP_001393244.1; NC_009704.1. DR STRING; 349747.YpsIP31758_A0049; -. DR EnsemblBacteria; ABS45606; ABS45606; YpsIP31758_A0049. DR GeneID; 5384103; -. DR KEGG; ypi:YpsIP31758_A0049; -. DR PATRIC; 18628042; VBIYerPse15693_0008. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; AKSDPYM; -. DR OrthoDB; EOG6N6849; -. DR BioCyc; YPSE349747:GH71-4439-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 104 AA; 12312 MW; C83F680C837E3843 CRC64; MALRTIPIRK SGNRHNLFMD GDREMVMFSG LLAAILIFAA QDWRAFFAGV VLWFSALWLL RLMAKSDPKM RQIYMRQRLY KKYYPARSTP FRINTEAQGK QYND // ID A7HSD0_PARL1 Unreviewed; 93 AA. AC A7HSD0; DT 11-SEP-2007, integrated into UniProtKB/TrEMBL. DT 11-SEP-2007, sequence version 1. DT 14-MAY-2014, entry version 30. DE SubName: Full=Conjugal transfer protein trbB; GN OrderedLocusNames=Plav_1192, Plav_3543; OS Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhodobiaceae; Parvibaculum. OX NCBI_TaxID=402881; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DS-1; RX PubMed=10788359; DOI=10.1128/AEM.66.5.1911-1916.2000; RA Schleheck D., Dong W., Denger K., Heinzle E., Cook A.M.; RT "An alpha-proteobacterium converts linear alkylbenzenesulfonate RT surfactants into sulfophenylcarboxylates and linear RT alkyldiphenyletherdisulfonate surfactants into RT sulfodiphenylethercarboxylates."; RL Appl. Environ. Microbiol. 66:1911-1916(2000). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DS-1; RX PubMed=12571015; DOI=10.1128/AEM.69.2.938-944.2003; RA Schleheck D., Lechner M., Schonenberger R., Suter M.J., Cook A.M.; RT "Desulfonation and degradation of the disulfodiphenylethercarboxylates RT from linear alkyldiphenyletherdisulfonate surfactants."; RL Appl. Environ. Microbiol. 69:938-944(2003). RN [3] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DS-1; RX PubMed=15240283; DOI=10.1128/AEM.70.7.4053-4063.2004; RA Schleheck D., Knepper T.P., Fischer K., Cook A.M.; RT "Mineralization of individual congeners of linear RT alkylbenzenesulfonate by defined pairs of heterotrophic bacteria."; RL Appl. Environ. Microbiol. 70:4053-4063(2004). RN [4] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DS-1; RX PubMed=15388700; DOI=10.1099/ijs.0.03020-0; RA Schleheck D., Tindall B.J., Rossello-Mora R., Cook A.M.; RT "Parvibaculum lavamentivorans gen. nov., sp. nov., a novel heterotroph RT that initiates catabolism of linear alkylbenzenesulfonate."; RL Int. J. Syst. Evol. Microbiol. 54:1489-1497(2004). RN [5] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DS-1; RX PubMed=14962144; DOI=10.1111/j.1365-2672.2004.02200.x; RA Dong W., Eichhorn P., Radajewski S., Schleheck D., Denger K., RA Knepper T.P., Murrell J.C., Cook A.M.; RT "Parvibaculum lavamentivorans converts linear alkylbenzenesulphonate RT surfactant to sulphophenylcarboxylates, alpha,beta-unsaturated RT sulphophenylcarboxylates and sulphophenyldicarboxylates, which are RT degraded in communities."; RL J. Appl. Microbiol. 96:630-640(2004). RN [6] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DS-1; RX PubMed=16075201; DOI=10.1007/s00203-005-0002-7; RA Schleheck D., Cook A.M.; RT "Omega-oxygenation of the alkyl sidechain of linear RT alkylbenzenesulfonate (LAS) surfactant in Parvibaculum RT lavamentivorans(T)."; RL Arch. Microbiol. 183:369-377(2005). RN [7] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DS-1; RX PubMed=17557839; DOI=10.1128/AEM.00632-07; RA Schleheck D., Knepper T.P., Eichhorn P., Cook A.M.; RT "Parvibaculum lavamentivorans DS-1T degrades centrally substituted RT congeners of commercial linear alkylbenzenesulfonate to sulfophenyl RT carboxylates and sulfophenyl dicarboxylates."; RL Appl. Environ. Microbiol. 73:4725-4732(2007). RN [8] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DS-1 / DSM 13023 / NCIMB 13966; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., RA Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., RA Kyrpides N., Mikhailova N., Richardson P.; RT "Complete genome sequence and annotation of Parvibaculum RT lavamentivorans DS-1."; RL Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases. RN [9] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DS-1; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., RA Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., RA Kyrpides N., Mikhailova N., Richardson P.; RL Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases. RN [10] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DS-1; RX PubMed=22675581; DOI=10.4056/sigs.2215005; RA Schleheck D., Weiss M., Pitluck S., Bruce D., Land M.L., Han S., RA Saunders E., Tapia R., Detter C., Brettin T., Han J., Woyke T., RA Goodwin L., Pennacchio L., Nolan M., Cook A.M., Kjelleberg S., RA Thomas T.; RT "Complete genome sequence of Parvibaculum lavamentivorans type strain RT (DS-1(T))."; RL Stand. Genomic Sci. 5:298-310(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000774; ABS62813.1; -; Genomic_DNA. DR EMBL; CP000774; ABS65141.1; -; Genomic_DNA. DR RefSeq; YP_001412470.1; NC_009719.1. DR RefSeq; YP_001414798.1; NC_009719.1. DR STRING; 402881.Plav_3543; -. DR EnsemblBacteria; ABS62813; ABS62813; Plav_1192. DR EnsemblBacteria; ABS65141; ABS65141; Plav_3543. DR GeneID; 5454073; -. DR GeneID; 5454221; -. DR KEGG; pla:Plav_1192; -. DR KEGG; pla:Plav_3543; -. DR PATRIC; 22863982; VBIParLav90819_1230. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; WAIGHIA; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; PLAV402881:GHQA-1206-MONOMER; -. DR BioCyc; PLAV402881:GHQA-3589-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9882 MW; F7C2CD1390972050 CRC64; MAAAFEQLDA VPGFTVPVHR ALTEHILLGG APRALAILNG TLAGAVGLGL RLWLVGLLIW AIGHIAAVWA AKRDPLFVEV GRRHLRIPAH LSV // ID A7HU71_PARL1 Unreviewed; 87 AA. AC A7HU71; DT 11-SEP-2007, integrated into UniProtKB/TrEMBL. DT 11-SEP-2007, sequence version 1. DT 14-MAY-2014, entry version 31. DE SubName: Full=Putative conjugal transfer TrbD transmembrane protein; GN OrderedLocusNames=Plav_1837; OS Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhodobiaceae; Parvibaculum. OX NCBI_TaxID=402881; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DS-1 / DSM 13023 / NCIMB 13966; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., RA Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., RA Kyrpides N., Mikhailova N., Richardson P.; RT "Complete genome sequence and annotation of Parvibaculum RT lavamentivorans DS-1."; RL Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000774; ABS63454.1; -; Genomic_DNA. DR RefSeq; YP_001413111.1; NC_009719.1. DR STRING; 402881.Plav_1837; -. DR EnsemblBacteria; ABS63454; ABS63454; Plav_1837. DR GeneID; 5454319; -. DR KEGG; pla:Plav_1837; -. DR PATRIC; 22865323; VBIParLav90819_1888. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; WIPGLVV; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; PLAV402881:GHQA-1863-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 87 AA; 9250 MW; F09593F1A71F266E CRC64; MSAHLEGFEV PLHRALAEPI LLAGAPRSVA ILNGTVAAAL GLGLQLWIAG LVLWLAGHTL CVFAAKRDPQ FGQVLARHLR QKGFLSC // ID A7ICW0_XANP2 Unreviewed; 90 AA. AC A7ICW0; DT 11-SEP-2007, integrated into UniProtKB/TrEMBL. DT 11-SEP-2007, sequence version 1. DT 14-MAY-2014, entry version 27. DE SubName: Full=Conjugal transfer protein TrbB; GN OrderedLocusNames=Xaut_0597; OS Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Xanthobacteraceae; Xanthobacter. OX NCBI_TaxID=78245; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-1158 / Py2; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., RA Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Brainard J., RA Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., RA Ensigns S.A., Richardson P.; RT "Complete sequence of chromosome of Xanthobacter autotrophicus Py2."; RL Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000781; ABS65853.1; -; Genomic_DNA. DR RefSeq; YP_001415510.1; NC_009720.1. DR STRING; 78245.Xaut_0597; -. DR EnsemblBacteria; ABS65853; ABS65853; Xaut_0597. DR GeneID; 5424813; -. DR KEGG; xau:Xaut_0597; -. DR PATRIC; 24043161; VBIXanAut29526_0887. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; GAVFWIV; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; XAUT78245:GHS6-601-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 90 AA; 9495 MW; CC340FF54771FDCC CRC64; MAGDAGEVPG FSVPIHRVLS EPILLGGAPR ALAIFNGTLA GAVGLGLRLW LVGLALWAIG HLTAVWAAKR DPLFVDVVRR HLRISSHLSV // ID A7ID56_XANP2 Unreviewed; 93 AA. AC A7ID56; DT 11-SEP-2007, integrated into UniProtKB/TrEMBL. DT 11-SEP-2007, sequence version 1. DT 14-MAY-2014, entry version 30. DE SubName: Full=Conjugal transfer protein TrbB; GN OrderedLocusNames=Xaut_0697; OS Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Xanthobacteraceae; Xanthobacter. OX NCBI_TaxID=78245; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-1158 / Py2; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., RA Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Brainard J., RA Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., RA Ensigns S.A., Richardson P.; RT "Complete sequence of chromosome of Xanthobacter autotrophicus Py2."; RL Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000781; ABS65949.1; -; Genomic_DNA. DR RefSeq; YP_001415606.1; NC_009720.1. DR STRING; 78245.Xaut_0697; -. DR EnsemblBacteria; ABS65949; ABS65949; Xaut_0697. DR GeneID; 5422734; -. DR KEGG; xau:Xaut_0697; -. DR PATRIC; 24043359; VBIXanAut29526_0985. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; GHFLAVW; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; XAUT78245:GHS6-702-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9906 MW; 7327E97658D53F98 CRC64; MAAVLEQLDA VPGFTIPVHR ALTEHILLGG APRSIAILNG TLAGAVGLGL RLWLVGLAIW AVGHFVAVWA AKRDPLFVEV GRRHLRIPAF LAV // ID A7IDA6_XANP2 Unreviewed; 93 AA. AC A7IDA6; DT 11-SEP-2007, integrated into UniProtKB/TrEMBL. DT 11-SEP-2007, sequence version 1. DT 14-MAY-2014, entry version 32. DE SubName: Full=Conjugal transfer protein TrbB; GN OrderedLocusNames=Xaut_0747; OS Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Xanthobacteraceae; Xanthobacter. OX NCBI_TaxID=78245; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-1158 / Py2; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., RA Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Brainard J., RA Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., RA Ensigns S.A., Richardson P.; RT "Complete sequence of chromosome of Xanthobacter autotrophicus Py2."; RL Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000781; ABS65999.1; -; Genomic_DNA. DR RefSeq; YP_001415656.1; NC_009720.1. DR STRING; 78245.Xaut_0747; -. DR EnsemblBacteria; ABS65999; ABS65999; Xaut_0747. DR GeneID; 5422016; -. DR KEGG; xau:Xaut_0747; -. DR PATRIC; 24043449; VBIXanAut29526_1030. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; VFMARSD; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; XAUT78245:GHS6-752-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9818 MW; 5026EE4A5A8515CC CRC64; MASLIDSAGE VPGYAVPVHR ALTEHILLGG APRSIAILNG TLAAALGLGL RLWLVGLGLW AIGHFAAVWA AKRDPQFVDV VRRHLRIPGH LSA // ID A7IJC6_XANP2 Unreviewed; 93 AA. AC A7IJC6; DT 11-SEP-2007, integrated into UniProtKB/TrEMBL. DT 11-SEP-2007, sequence version 1. DT 14-MAY-2014, entry version 30. DE SubName: Full=Conjugal transfer protein TrbB; GN OrderedLocusNames=Xaut_2880; OS Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Xanthobacteraceae; Xanthobacter. OX NCBI_TaxID=78245; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-1158 / Py2; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., RA Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Brainard J., RA Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., RA Ensigns S.A., Richardson P.; RT "Complete sequence of chromosome of Xanthobacter autotrophicus Py2."; RL Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000781; ABS68119.1; -; Genomic_DNA. DR RefSeq; YP_001417776.1; NC_009720.1. DR STRING; 78245.Xaut_2880; -. DR EnsemblBacteria; ABS68119; ABS68119; Xaut_2880. DR GeneID; 5420773; -. DR KEGG; xau:Xaut_2880; -. DR PATRIC; 24047853; VBIXanAut29526_3210. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; WAIGHIA; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; XAUT78245:GHS6-2909-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9804 MW; 36212287F1FA06E9 CRC64; MASLTDSVGD VPGFAVPVHR ALTEHILLGG APRSIAILNG TLAAALGLGL RLWLVGLGLW AIGHFAAVWA AKRDPQFVDV VRRHLRIPGH LSA // ID A7IJN9_XANP2 Unreviewed; 90 AA. AC A7IJN9; DT 11-SEP-2007, integrated into UniProtKB/TrEMBL. DT 11-SEP-2007, sequence version 1. DT 14-MAY-2014, entry version 31. DE SubName: Full=Conjugal transfer protein TrbB; GN OrderedLocusNames=Xaut_3002; OS Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Xanthobacteraceae; Xanthobacter. OX NCBI_TaxID=78245; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-1158 / Py2; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., RA Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Brainard J., RA Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., RA Ensigns S.A., Richardson P.; RT "Complete sequence of chromosome of Xanthobacter autotrophicus Py2."; RL Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000781; ABS68232.1; -; Genomic_DNA. DR RefSeq; YP_001417889.1; NC_009720.1. DR STRING; 78245.Xaut_3002; -. DR EnsemblBacteria; ABS68232; ABS68232; Xaut_3002. DR GeneID; 5423570; -. DR KEGG; xau:Xaut_3002; -. DR PATRIC; 24048089; VBIXanAut29526_3327. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; ALTEHIM; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; XAUT78245:GHS6-3032-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 90 AA; 9451 MW; CEDC96758F3F9BF9 CRC64; MAGVADDVPG FTVAVHRALS EPILLGGAPR AIAIMNGTLA GALGLGLRLW LVGLIVWAIG HFAAVWAAKR DPLFVDVGRR HLRIPAHLSV // ID A7IMH8_XANP2 Unreviewed; 90 AA. AC A7IMH8; DT 11-SEP-2007, integrated into UniProtKB/TrEMBL. DT 11-SEP-2007, sequence version 1. DT 14-MAY-2014, entry version 31. DE SubName: Full=Conjugal transfer protein TrbB; GN OrderedLocusNames=Xaut_3998; OS Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Xanthobacteraceae; Xanthobacter. OX NCBI_TaxID=78245; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-1158 / Py2; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., RA Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Brainard J., RA Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., RA Ensigns S.A., Richardson P.; RT "Complete sequence of chromosome of Xanthobacter autotrophicus Py2."; RL Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000781; ABS69221.1; -; Genomic_DNA. DR RefSeq; YP_001418878.1; NC_009720.1. DR STRING; 78245.Xaut_3998; -. DR EnsemblBacteria; ABS69221; ABS69221; Xaut_3998. DR GeneID; 5423866; -. DR KEGG; xau:Xaut_3998; -. DR PATRIC; 24050148; VBIXanAut29526_4340. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; XAUT78245:GHS6-4044-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 90 AA; 9242 MW; 18F7AC60D6730787 CRC64; MPGDIGGVPG FSVPVHRALS EPILLGGAPR AIAIFNGTLA GAVGLGLRLW LVGLAVGAVG HLAAVWAAKR DPLFVDVVRR HLRIPGHLSV // ID A7IQI9_XANP2 Unreviewed; 112 AA. AC A7IQI9; DT 11-SEP-2007, integrated into UniProtKB/TrEMBL. DT 11-SEP-2007, sequence version 1. DT 14-MAY-2014, entry version 27. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Xaut_5087; OS Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2). OG Plasmid pXAUT01. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Xanthobacteraceae; Xanthobacter. OX NCBI_TaxID=78245; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-1158 / Py2; PLASMID=pXAUT01; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., RA Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Brainard J., RA Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., RA Ensigns S.A., Richardson P.; RT "Complete sequence of plasmid pXAUT01 of Xanthobacter autotrophicus RT Py2."; RL Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000782; ABS70285.1; -; Genomic_DNA. DR RefSeq; YP_001409521.1; NC_009717.1. DR STRING; 78245.Xaut_5087; -. DR EnsemblBacteria; ABS70285; ABS70285; Xaut_5087. DR GeneID; 5420477; -. DR KEGG; xau:Xaut_5087; -. DR PATRIC; 24041935; VBIXanAut29526_0279. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; HDHNMFR; -. DR OrthoDB; EOG6VMTNS; -. DR BioCyc; XAUT78245:GHS6-5145-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 112 AA; 12476 MW; 041FB95F9F89C477 CRC64; MAKSVALEED TLFLACTRPA MVAGVTMEAM GINVILTTIL YILAGSIAYA LVGFVFHLVF KTLVKHDHNM FRVLMAWIET RGRSRNGAFW GGTTLTPLKL VRRYDERDLG LA // ID A7K7I5_COMTE Unreviewed; 103 AA. AC A7K7I5; DT 11-SEP-2007, integrated into UniProtKB/TrEMBL. DT 11-SEP-2007, sequence version 1. DT 14-MAY-2014, entry version 19. DE SubName: Full=TrbD; GN Name=trbD; OS Comamonas testosteroni CNB-1. OG Plasmid pCNB. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Comamonas. OX NCBI_TaxID=543891; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pCNB; RX PubMed=15580337; DOI=10.1007/s00203-004-0738-5; RA Wu J.F., Sun C.W., Jiang C.Y., Liu Z.P., Liu S.J.; RT "A novel 2-aminophenol 1,6-dioxygenase involved in the degradation of RT p-chloronitrobenzene by Comamonas strain CNB-1: purification, RT properties, genetic cloning and expression in Escherichia coli."; RL Arch. Microbiol. 183:1-8(2005). RN [2] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pCNB; RX PubMed=16517619; DOI=10.1128/AEM.72.3.1759-1765.2006; RA Wu J.F., Jiang C.Y., Wang B.J., Ma Y.F., Liu Z.P., Liu S.J.; RT "Novel partial reductive pathway for 4-chloronitrobenzene and RT nitrobenzene degradation in Comamonas sp. strain CNB-1."; RL Appl. Environ. Microbiol. 72:1759-1765(2006). RN [3] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pCNB; RA Ma Y., Liu L., Wang S., Wu J., Zhao G., Liu S.; RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases. RN [4] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pCNB; RX PubMed=17526790; DOI=10.1128/AEM.00616-07; RA Ma Y.F., Wu J.F., Wang S.Y., Jiang C.Y., Zhang Y., Qi S.W., Liu L., RA Zhao G.P., Liu S.J.; RT "Nucleotide sequence of plasmid pCNB1 from Comamonas strain CNB-1 RT reveals novel genetic organization and evolution for 4- RT chloronitrobenzene degradation."; RL Appl. Environ. Microbiol. 73:4477-4483(2007). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EF079106; ABM06209.1; -; Genomic_DNA. DR RefSeq; YP_001967673.1; NC_010935.1. DR GeneID; 6386629; -. DR PATRIC; 35260626; VBIComTes153857_0026. DR BioCyc; CTES543891:GJCV-4916-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11860 MW; D54CECAB78AD75E2 CRC64; MALRAIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QEVRATVFGI ALWFGALFVL RLMAKSDPKL RHVYLRHRRY KPYYPARSTP FRENTPSQGK QYK // ID A7KZV5_SALDU Unreviewed; 104 AA. AC A7KZV5; DT 11-SEP-2007, integrated into UniProtKB/TrEMBL. DT 11-SEP-2007, sequence version 1. DT 14-MAY-2014, entry version 11. DE SubName: Full=TrwM; GN Name=trwM; OS Salmonella dublin. OG Plasmid IncW pIE321. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella. OX NCBI_TaxID=98360; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=IncW pIE321; RX PubMed=18268088; DOI=10.1128/AAC.00982-07; RA Revilla C., Garcillan-Barcia M.P., Fernandez-Lopez R., Thomson N.R., RA Sanders M., Cheung M., Thomas C.M., de la Cruz F.; RT "Different pathways to acquiring resistance genes illustrated by the RT recent evolution of IncW plasmids."; RL Antimicrob. Agents Chemother. 52:1472-1480(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EF633507; ABS71088.1; -; Genomic_DNA. DR RefSeq; YP_001911176.1; NC_010716.1. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 104 AA; 12235 MW; 652B59C4B1C5D4AD CRC64; MKPPQQQHEA FPLFKGATRL PTILGEPMIP LMAMVMGVAV IALTVSIWWW ALVPPLWFIM AQITKNDDKA FRIWWLWIDT KFRNRNKGFW GASSYSPANY RKRR // ID A7MRA9_CROS8 Unreviewed; 914 AA. AC A7MRA9; DT 02-OCT-2007, integrated into UniProtKB/TrEMBL. DT 02-OCT-2007, sequence version 1. DT 14-MAY-2014, entry version 32. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=ESA_pESA2p06580; OS Cronobacter sakazakii (strain ATCC BAA-894) (Enterobacter sakazakii). OG Plasmid pESA2. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Cronobacter. OX NCBI_TaxID=290339; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-894; RX PubMed=20221447; DOI=10.1371/journal.pone.0009556; RA Kucerova E., Clifton S.W., Xia X.Q., Long F., Porwollik S., Fulton L., RA Fronick C., Minx P., Kyung K., Warren W., Fulton R., Feng D., RA Wollam A., Shah N., Bhonagiri V., Nash W.E., Hallsworth-Pepin K., RA Wilson R.K., McClelland M., Forsythe S.J.; RT "Genome sequence of Cronobacter sakazakii BAA-894 and comparative RT genomic hybridization analysis with other Cronobacter species."; RL PLoS ONE 5:E9556-E9556(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000784; ABU79613.1; -; Genomic_DNA. DR RefSeq; YP_001440449.1; NC_009779.1. DR ProteinModelPortal; A7MRA9; -. DR STRING; 290339.ESA_pESA2p06580; -. DR EnsemblBacteria; ABU79613; ABU79613; ESA_pESA2p06580. DR GeneID; 5552531; -. DR KEGG; esa:ESA_pESA2p06580; -. DR PATRIC; 20400440; VBICroSak107175_3947. DR eggNOG; COG3451; -. DR HOGENOM; HOG000119263; -. DR KO; K03199; -. DR OrthoDB; EOG6HMX9P; -. DR BioCyc; CSAK290339:GJ80-4551-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 914 AA; 103581 MW; E15B80719A9B1FA6 CRC64; MAKLLKAMKR PAALWGVPMV PLLGVTGVTI IVAIWTSVSL LLLLPVEFLV MKSLTRNEPM RFNLIAVWLR ARGKPVANRL FGATTFMPVE HEPVDITEFI DAMKLNQSAT IRKYIPYSSH IHPNVVRSPK SDLYCTWEVM GTPFDCESEE TLQIGTNQLH GLIRSFEGLP VTFYVHNIRE QFTDSLHKES GNPYADKISE LYYASLKDAP FRRNRLFITV CFRPFVGLEK AERKRMKDTE KLKELDGALQ EMLEIKSTLD TAFSRYGARS LGTFTEGKAV YSSQLAFYEY LLTHQWRRVR VTRTPAYDVM GAAALFFSAE SGQINHVSGT SYFRGLEVKE FSEETGTGMM DSLLYAPCDY VITQSYTCMS REEAKNAIKR TRRLLMSSDD DAVSQRLDLD VALDLLTSGK IAYGKHHFSI MVHSPTLDSL VADTNEISNA LNNIGITPVP AEISLSAAYM AQLPGNYNLR PRKGELSSQN FVELAALHNF YPGKRDHAPW GDAMALLRTP SGDGYYLNLH NTLADKDEFD EKNPASTCIL GTNGSGKTML MTFLENMQQK YRRADSFSPD ARTKRLTTVY LDKDRGAEMN IRALDGRYYR VISGERTGWN PFSLPATKRN INFIKQLMKI LCTRNGSTIT PRDEQRLSIA VNAVMSDDPE YRRFGITRLR EQLPEPATKE AQENGLDIRL SQWAQGGEFG WVFDNESDTF DISNCDNFGI DGTEFLDDAN VCAPISFYLL YRITSLLDGR RLVIYMDEFW KWLRDPVFKD FAYNKLKTIR KLNGMLVVGT QSPHEIIKDD IAPAVIEQCG TQILAANPSA DRSHYVDGMK FEPEVFDVVK GLDPQARQYV VVKNQFRRGD TKRFAARVTL DLSGIGRYTK VMSGDAPNLE IFESIYREGM QPHEWLDTYM AKAL // ID A8AEY3_CITK8 Unreviewed; 912 AA. AC A8AEY3; DT 23-OCT-2007, integrated into UniProtKB/TrEMBL. DT 23-OCT-2007, sequence version 1. DT 14-MAY-2014, entry version 37. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=CKO_00896; OS Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696). OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Citrobacter. OX NCBI_TaxID=290338; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-895 / CDC 4225-83 / SGSC4696; RG The Citrobacter koseri Genome Sequencing Project; RA McClelland M., Sanderson E.K., Porwollik S., Spieth J., Clifton W.S., RA Latreille P., Courtney L., Wang C., Pepin K., Bhonagiri V., Nash W., RA Johnson M., Thiruvilangam P., Wilson R.; RL Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000822; ABV12046.1; -; Genomic_DNA. DR RefSeq; YP_001452482.1; NC_009792.1. DR ProteinModelPortal; A8AEY3; -. DR STRING; 290338.CKO_00896; -. DR EnsemblBacteria; ABV12046; ABV12046; CKO_00896. DR GeneID; 5584927; -. DR KEGG; cko:CKO_00896; -. DR PATRIC; 20385073; VBICitKos71230_0764. DR eggNOG; COG3451; -. DR HOGENOM; HOG000119263; -. DR KO; K03199; -. DR OMA; FSEETAT; -. DR OrthoDB; EOG6HMX9P; -. DR BioCyc; CKOS290338:GJ8L-895-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 912 AA; 103084 MW; 095C183866793052 CRC64; MAKLLKAMKR PAALWGVPMV PLLAVTGVTI IVAIWTSVAL LFLLPVQFLV MKSLTRNEPM RFNLIAVWLR AKGKPVANRL FGATTFMPVE HDDVDIKEFL DAMKLNQCAT IKKYIPYSSH IHQHVVRSPK SDLYCTWELM GTPFDCESDE SLQFGTNQLH GLIRSFEGMP VTFYIHNDRN TFTDNLHKDS GNPYADEVSR LYYASVGLFR RNRLFLTVCY RPFVSLEKAE RKRMKDSQKL KELDGALLEM LEIKSTLDTA LSRYGARPLG TFTEGNAVFS SQLAFYEYLL THQWRKVRVT RTPAYDVMGA AALFFSAESG QINHANGTQY FRGLEVKEFS EETATGMMDS LLYAPCDYVI TQSYTCMSRE EAKKAIKRTR RLLMSADDDA VSQRLDLDVA LDLLTSGKIA YGKHHFSIMV YSPSLESLVA DTNEISNALN NIGITPVPAE ISLSAAYMAQ LPGNYNLRPR KGELSSQNFV ELAALHNFYP GKRDKAPWGD AMALLRTPSG DGYYINLHNT LADKDEFNEK NPASTCILGT NGSGKTMLMT FFEIMQQKYG REDSFSPDAK TKRLTTVYLD KDRGAEMNIR ALGGRYYRVI SGESTGWNPF SLPATKRNIN FIKQLMKILC TRNGSTISPR DERRLSDAVN AVMNDEPQYR VYGITRMLEN LPEPATKEAQ ENGLSIRLSQ WAQGGEFGWV FDNESDTFDI SNCDNFGIDG TEFLDDASVC APISFYLLYR ITSLLDGRRL VIFMDEFWKW LRDPVFKDFA YNKLKTIRKL NGMLVVGTQS PAEIIKDDIA PAVIEQCGTQ ILAANPNADR AHYVDGMKFE PEVFDVVKGL DPQARQYVVV KNQFKRGDTK RFAARVTLDL SGIGRYTKVM SGDAPNLEIF ESIYREGMQP HEWLDTYLAK AL // ID A8EXG6_RICCK Unreviewed; 95 AA. AC A8EXG6; DT 13-NOV-2007, integrated into UniProtKB/TrEMBL. DT 13-NOV-2007, sequence version 1. DT 14-MAY-2014, entry version 27. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN OrderedLocusNames=A1E_00495; OS Rickettsia canadensis (strain McKiel). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; belli group. OX NCBI_TaxID=293613; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=McKiel; RA Madan A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Dasch G., Eremeeva M.; RT "Complete genome sequence of Rickettsia canadensis."; RL Submitted (SEP-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000409; ABV73049.1; -; Genomic_DNA. DR RefSeq; YP_001491834.1; NC_009879.1. DR STRING; 293613.A1E_00495; -. DR EnsemblBacteria; ABV73049; ABV73049; A1E_00495. DR GeneID; 5626630; -. DR KEGG; rcm:A1E_00495; -. DR PATRIC; 17884765; VBIRicCan89738_0111. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; RCAN293613:GHI3-100-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10884 MW; 50DCC0762CAA69B4 CRC64; MAGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIFFI WNNGIMILFI ATALHLIAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYRA NSYGI // ID A8F0L0_RICM5 Unreviewed; 95 AA. AC A8F0L0; DT 13-NOV-2007, integrated into UniProtKB/TrEMBL. DT 13-NOV-2007, sequence version 1. DT 14-MAY-2014, entry version 30. DE SubName: Full=VirB3; GN Name=virB3; OrderedLocusNames=RMA_0144; OS Rickettsia massiliae (strain Mtu5). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=416276; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Mtu5; RX PubMed=17916642; DOI=10.1101/gr.6742107; RA Blanc G., Ogata H., Robert C., Audic S., Claverie J.M., Raoult D.; RT "Lateral gene transfer between obligate intracellular bacteria: RT evidence from the Rickettsia massiliae genome."; RL Genome Res. 17:1657-1664(2007). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000683; ABV84446.1; -; Genomic_DNA. DR RefSeq; YP_001498993.1; NC_009900.1. DR STRING; 416276.RMA_0144; -. DR EnsemblBacteria; ABV84446; ABV84446; RMA_0144. DR GeneID; 5665604; -. DR KEGG; rms:RMA_0144; -. DR PATRIC; 17894402; VBIRicMas83254_0194. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; RMAS416276:GJD3-148-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10835 MW; 15269E8D69B84135 CRC64; MVGTLASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTN QCPNKFYYGA NSYNI // ID A8GM61_RICAH Unreviewed; 95 AA. AC A8GM61; DT 13-NOV-2007, integrated into UniProtKB/TrEMBL. DT 13-NOV-2007, sequence version 1. DT 14-MAY-2014, entry version 27. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN OrderedLocusNames=A1C_00780; OS Rickettsia akari (strain Hartford). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=293614; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Hartford; RA Madan A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Dasch G., Eremeeva M.; RT "Complete genome sequence of Rickettsia akari."; RL Submitted (SEP-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000847; ABV74486.1; -; Genomic_DNA. DR RefSeq; YP_001492994.1; NC_009881.1. DR STRING; 293614.A1C_00780; -. DR EnsemblBacteria; ABV74486; ABV74486; A1C_00780. DR GeneID; 5645785; -. DR KEGG; rak:A1C_00780; -. DR PATRIC; 17875205; VBIRicAka50705_0160. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; RAKA293614:GI4A-153-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10766 MW; 45CD99995CA9456F CRC64; MSGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID A8GQS3_RICRS Unreviewed; 95 AA. AC A8GQS3; DT 13-NOV-2007, integrated into UniProtKB/TrEMBL. DT 13-NOV-2007, sequence version 1. DT 14-MAY-2014, entry version 26. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN OrderedLocusNames=A1G_00810; OS Rickettsia rickettsii (strain Sheila Smith). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=392021; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Sheila Smith; RA Madan A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Dasch G., Eremeeva M.; RT "Complete genome sequence of Rickettsia rickettsii."; RL Submitted (SEP-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000848; ABV75748.1; -; Genomic_DNA. DR RefSeq; YP_001494256.1; NC_009882.1. DR STRING; 392021.A1G_00810; -. DR EnsemblBacteria; ABV75748; ABV75748; A1G_00810. DR GeneID; 5647439; -. DR KEGG; rri:A1G_00810; -. DR PATRIC; 17903007; VBIRicRic5337_0173. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; RRIC392021:GIY1-156-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10750 MW; 7253E0673CBA777C CRC64; MAGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID A8GUK8_RICB8 Unreviewed; 95 AA. AC A8GUK8; DT 13-NOV-2007, integrated into UniProtKB/TrEMBL. DT 13-NOV-2007, sequence version 1. DT 14-MAY-2014, entry version 28. DE SubName: Full=VirB3; GN OrderedLocusNames=A1I_00490; OS Rickettsia bellii (strain OSU 85-389). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; belli group. OX NCBI_TaxID=391896; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=OSU 85-389; RA Madan A., Lee H., Madan A., Yoon J.-G., Ryu G.-Y., Dasch G., RA Ereemeva M.; RT "Complete genome sequencing of Rickettsia bellii."; RL Submitted (SEP-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000849; ABV78504.1; -; Genomic_DNA. DR RefSeq; YP_001495541.1; NC_009883.1. DR STRING; 391896.A1I_00490; -. DR EnsemblBacteria; ABV78504; ABV78504; A1I_00490. DR GeneID; 5646377; -. DR KEGG; rbo:A1I_00490; -. DR PATRIC; 17878039; VBIRicBel35792_0103. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; RBEL391896:GH75-94-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10755 MW; 0B10A0E490D7435A CRC64; MAGTLATDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAGLHLIAYI ICFKEPRFIE LYMNKMSRTS QCPNKFYYGA NSYGI // ID A8IPD0_AZOC5 Unreviewed; 89 AA. AC A8IPD0; DT 04-DEC-2007, integrated into UniProtKB/TrEMBL. DT 04-DEC-2007, sequence version 1. DT 14-MAY-2014, entry version 29. DE SubName: Full=Conjugal transfer protein; GN Name=trbD; OrderedLocusNames=AZC_3860; OS Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Xanthobacteraceae; Azorhizobium. OX NCBI_TaxID=438753; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 43989 / DSM 5975 / ORS 571; RA Lee K.B., Backer P.D., Aono T., Liu C.T., Suzuki S., Suzuki T., RA Kaneko T., Yamada M., Tabata S., Kupfer D.M., Najar F.Z., Wiley G.B., RA Roe B., Binnewies T., Ussery D., Vereecke D., Gevers D., Holsters M., RA Oyaizu H.; RT "Complete genome sequence of the nitrogen-fixing bacterium RT Azorhizobium caulinodans ORS571."; RL Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP009384; BAF89858.1; -; Genomic_DNA. DR RefSeq; YP_001526776.1; NC_009937.1. DR STRING; 438753.AZC_3860; -. DR EnsemblBacteria; BAF89858; BAF89858; AZC_3860. DR GeneID; 5691142; -. DR KEGG; azc:AZC_3860; -. DR PATRIC; 21024573; VBIAzoCau17976_4026. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; ALTEHIM; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; ACAU438753:GJF3-3905-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 89 AA; 9338 MW; 0E5B0FC04AC7F751 CRC64; MAETVEVPGF SVPVHRALNE PILLGGAPRA IAIVNGTLAG AVGLGLRLWL VGLAIGVIGH IAAVWAAKRD PLFVEVVRRH LRIPAHLSV // ID A8LT06_DINSH Unreviewed; 92 AA. AC A8LT06; DT 04-DEC-2007, integrated into UniProtKB/TrEMBL. DT 04-DEC-2007, sequence version 1. DT 14-MAY-2014, entry version 25. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN Name=virB2; OrderedLocusNames=Dshi_3640; OS Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12). OG Plasmid pDSHI01. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Dinoroseobacter. OX NCBI_TaxID=398580; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 16493 / NCIMB 14021 / DFL 12; RX PubMed=19741735; DOI=10.1038/ismej.2009.94; RA Wagner-Dobler I., Ballhausen B., Berger M., Brinkhoff T., Buchholz I., RA Bunk B., Cypionka H., Daniel R., Drepper T., Gerdts G., Hahnke S., RA Han C., Jahn D., Kalhoefer D., Kiss H., Klenk H.P., Kyrpides N., RA Liebl W., Liesegang H., Meincke L., Pati A., Petersen J., RA Piekarski T., Pommerenke C., Pradella S., Pukall R., Rabus R., RA Stackebrandt E., Thole S., Thompson L., Tielen P., Tomasch J., RA von Jan M., Wanphrut N., Wichels A., Zech H., Simon M.; RT "The complete genome sequence of the algal symbiont Dinoroseobacter RT shibae: a hitchhiker's guide to life in the sea."; RL ISME J. 4:61-77(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000831; ABV95373.1; -; Genomic_DNA. DR RefSeq; YP_001541854.1; NC_009955.1. DR STRING; 398580.Dshi_3640; -. DR EnsemblBacteria; ABV95373; ABV95373; Dshi_3640. DR GeneID; 5714170; -. DR KEGG; dsh:Dshi_3640; -. DR PATRIC; 21820100; VBIDinShi9476_3777. DR eggNOG; COG3702; -. DR HOGENOM; HOG000251901; -. DR KO; K03198; -. DR OMA; VWIQHIV; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; DSHI398580:GKEL-3681-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 92 AA; 10334 MW; 3D85F14DCF5C491C CRC64; MAERSPLFLG LVRPPKLLGL PIMYAMVWLF GSVLLFVWVQ HIAVLGVAAL LYPVLWKAAD WDPRFIDVMM TALQETPPTR NRSIHGGDSY AP // ID A8LTZ5_DINSH Unreviewed; 92 AA. AC A8LTZ5; DT 04-DEC-2007, integrated into UniProtKB/TrEMBL. DT 04-DEC-2007, sequence version 1. DT 14-MAY-2014, entry version 27. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN Name=virB2; OrderedLocusNames=Dshi_3975; OS Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12). OG Plasmid pDSHI03. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Dinoroseobacter. OX NCBI_TaxID=398580; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 16493 / NCIMB 14021 / DFL 12; RX PubMed=19741735; DOI=10.1038/ismej.2009.94; RA Wagner-Dobler I., Ballhausen B., Berger M., Brinkhoff T., Buchholz I., RA Bunk B., Cypionka H., Daniel R., Drepper T., Gerdts G., Hahnke S., RA Han C., Jahn D., Kalhoefer D., Kiss H., Klenk H.P., Kyrpides N., RA Liebl W., Liesegang H., Meincke L., Pati A., Petersen J., RA Piekarski T., Pommerenke C., Pradella S., Pukall R., Rabus R., RA Stackebrandt E., Thole S., Thompson L., Tielen P., Tomasch J., RA von Jan M., Wanphrut N., Wichels A., Zech H., Simon M.; RT "The complete genome sequence of the algal symbiont Dinoroseobacter RT shibae: a hitchhiker's guide to life in the sea."; RL ISME J. 4:61-77(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000833; ABV95703.1; -; Genomic_DNA. DR RefSeq; YP_001542184.1; NC_009957.1. DR STRING; 398580.Dshi_3975; -. DR EnsemblBacteria; ABV95703; ABV95703; Dshi_3975. DR GeneID; 5714504; -. DR KEGG; dsh:Dshi_3975; -. DR PATRIC; 21820766; VBIDinShi9476_4110. DR eggNOG; COG3702; -. DR HOGENOM; HOG000251901; -. DR KO; K03198; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; DSHI398580:GKEL-4012-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 92 AA; 10318 MW; 2F96D07FDC6E4902 CRC64; MAERAPLFLG LVRPPKLLGL PIMYAMVWLF GSVLLFVWVQ HIAVLGVAAL LYPVLWKAAD WDPRFIDVMM TALQETPPTR NRSIHGGDSY AP // ID A8PK76_9COXI Unreviewed; 115 AA. AC A8PK76; DT 15-JAN-2008, integrated into UniProtKB/TrEMBL. DT 15-JAN-2008, sequence version 1. DT 19-FEB-2014, entry version 7. DE SubName: Full=Uncharacterized protein; GN ORFNames=RICGR_0329; OS Rickettsiella grylli. OC Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; OC Coxiellaceae; Rickettsiella. OX NCBI_TaxID=59196; RN [1] RP NUCLEOTIDE SEQUENCE. RA Seshadri R., Federici B.A.; RL Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RA Myers G.S.; RL Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAQJ02000001; EDP46730.1; -; Genomic_DNA. DR EnsemblBacteria; EDP46730; EDP46730; RICGR_0329. DR PATRIC; 30021963; VBIRicGry46442_0310. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 115 AA; 13368 MW; 791DC688FA4C7EBE CRC64; MQASSSLYFK SLNRHFHVFG VEPQLFYLLM GLCLPIAVSA HLNGLMDLIA VVIFMLLYLI SVYITRLDKQ ILAIYRRHIY YQDYYPAHPS VHAKSTLIKP SVPFYHGKRG FFNVE // ID A8PLL1_9COXI Unreviewed; 108 AA. AC A8PLL1; DT 15-JAN-2008, integrated into UniProtKB/TrEMBL. DT 15-JAN-2008, sequence version 1. DT 03-APR-2013, entry version 6. DE SubName: Full=Mating pair formation protein TrbD; GN ORFNames=RICGR_0461; OS Rickettsiella grylli. OC Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; OC Coxiellaceae; Rickettsiella. OX NCBI_TaxID=59196; RN [1] RP NUCLEOTIDE SEQUENCE. RA Seshadri R., Federici B.A.; RL Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RA Myers G.S.; RL Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAQJ02000001; EDP47012.1; -; Genomic_DNA. DR EnsemblBacteria; EDP47012; EDP47012; RICGR_0461. DR PATRIC; 30022227; VBIRicGry46442_0441. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 108 AA; 12327 MW; 2BE5D7EE1F86B5D3 CRC64; MMRGTVIVVN KALMRLMIGG VEKRLVFANA LLSFPLVAST HFHFPACLLG FGFFIAMHFV LLLISKSDPN LGKLFKRSTR YSLRAYFPAK SHPLMTEIWK IKTVSRPW // ID A8R750_SALDU Unreviewed; 104 AA. AC A8R750; DT 15-JAN-2008, integrated into UniProtKB/TrEMBL. DT 15-JAN-2008, sequence version 1. DT 14-MAY-2014, entry version 8. DE SubName: Full=TrwM protein; GN Name=trwM; OS Salmonella dublin. OG Plasmid pMAK3. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella. OX NCBI_TaxID=98360; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=L-2156; PLASMID=pMAK3; RA Akiba M.; RT "Salmonella enterica subsp. enterica serovar Choleraesuis str. L-2454 RT plasmid pMAK1 complete sequence, Salmonella enterica subsp. enterica RT serovar Dublin str. L-789 plasmid pMAK2 complete sequence, Salmonella RT enterica subsp. enterica serovar Dublin str. L-2156 plasmid pMAK3 RT complete sequence."; RL Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AB366442; BAF93137.1; -; Genomic_DNA. DR RefSeq; YP_001552054.1; NC_009982.1. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 104 AA; 12278 MW; BEB48D8F31D4D325 CRC64; MKPPQQQHEA FPLFKGATRL PTIWGVPMIP LMAMVMGVAV IALTVSIWWW ALVPPLWFIM AQITKNDDKA FRIWWLWIDT KFRNRNKGFW GASSYSPANY RKRR // ID A8W0C7_AGRRH Unreviewed; 99 AA. AC A8W0C7; DT 15-JAN-2008, integrated into UniProtKB/TrEMBL. DT 15-JAN-2008, sequence version 1. DT 14-MAY-2014, entry version 12. DE SubName: Full=Rcorf92; OS Agrobacterium rhizogenes. OG Plasmid pRi2659. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium. OX NCBI_TaxID=359; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=K599; PLASMID=pRi2659; RA Mankin S.L., Hill D.S., Olhoft P.M., Toren E., Wenck A.R., Nea L., RA Xing L., Brown J.A., Fu H., Ireland L., Jia H., Hillebrand H., RA Jones T., Song H.-S.; RT "Disarming and sequencing of Agrobacterium rhizogenes strain K599 RT (NCPPB2659) plasmid pRi2659."; RL In Vitro Cell. Dev. Biol. Plant 0:0-0(2007). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EU186381; ABW33649.1; -; Genomic_DNA. DR RefSeq; YP_001961067.1; NC_010841.1. DR GeneID; 6383352; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 99 AA; 11262 MW; 0C144A4348FC6479 CRC64; MANSPSGLQR NRIHRALSRP NLLMGADREL VLLTGLAAVI LIFVVLTVYS ALFGIAVWVV IVGLLRMMAK SDPFMRQVYI RHISYKPTYK ATTSPWRRY // ID A9AED0_BURM1 Unreviewed; 94 AA. AC A9AED0; DT 15-JAN-2008, integrated into UniProtKB/TrEMBL. DT 15-JAN-2008, sequence version 1. DT 14-MAY-2014, entry version 39. DE SubName: Full=Putative conjugal transfer TrbD transmembrane protein; DE SubName: Full=Type IV secretion system protein; GN Name=trbD; OrderedLocusNames=Bmul_2352, BMULJ_00889; OS Burkholderia multivorans (strain ATCC 17616 / 249). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia; Burkholderia cepacia complex. OX NCBI_TaxID=395019; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 17616, and ATCC 17616 / 249; RA Ohtsubo Y., Yamashita A., Kurokawa K., Takami H., Yuhara S., RA Nishiyama E., Endo R., Miyazaki R., Ono A., Yano K., Ito M., Sota M., RA Yuji N., Hattori M., Tsuda M.; RT "Complete genome sequence of Burkholderia multivorans ATCC 17616."; RL Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 17616 / 249; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., RA Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Kim E., Tiedje J., Richardson P.; RT "Complete sequence of chromosome 1 of Burkholderia multivorans ATCC RT 17616."; RL Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases. RN [3] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 17616; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., RA Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Kim E., Tiedje J., Richardson P.; RT "Complete sequence of chromosome1 of Burkholderia multivorans ATCC RT 17616."; RL Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000868; ABX16037.1; -; Genomic_DNA. DR EMBL; AP009385; BAG42842.1; -; Genomic_DNA. DR RefSeq; YP_001580534.1; NC_010084.1. DR RefSeq; YP_001945378.1; NC_010804.1. DR STRING; 395019.Bmul_2352; -. DR EnsemblBacteria; ABX16037; ABX16037; Bmul_2352. DR EnsemblBacteria; BAG42842; BAG42842; BMULJ_00889. DR GeneID; 5765919; -. DR GeneID; 6360267; -. DR KEGG; bmj:BMULJ_00889; -. DR KEGG; bmu:Bmul_2352; -. DR PATRIC; 19163520; VBIBurMul203716_1851. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; PGLVLWI; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; BMUL395019:GIYO-889-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 94 AA; 9872 MW; B7CB941E66D79C50 CRC64; MSAANEGAPG FASGFEIPLH RSLTEPILLG GAPRTVAIAN GTLAAAVGLG LQLWIPGAVL WIVGHSLAVW GARVDPQFMQ VFARHIKHKP LLDV // ID A9ARV6_BURM1 Unreviewed; 87 AA. AC A9ARV6; DT 15-JAN-2008, integrated into UniProtKB/TrEMBL. DT 15-JAN-2008, sequence version 1. DT 14-MAY-2014, entry version 29. DE SubName: Full=Type IV secretion system protein; DE SubName: Full=Uncharacterized protein; GN Name=trbD; OrderedLocusNames=Bmul_5608, BMULJ_05896; OS Burkholderia multivorans (strain ATCC 17616 / 249). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia; Burkholderia cepacia complex. OX NCBI_TaxID=395019; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 17616, and ATCC 17616 / 249; RA Ohtsubo Y., Yamashita A., Kurokawa K., Takami H., Yuhara S., RA Nishiyama E., Endo R., Miyazaki R., Ono A., Yano K., Ito M., Sota M., RA Yuji N., Hattori M., Tsuda M.; RT "Complete genome sequence of Burkholderia multivorans ATCC 17616."; RL Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 17616 / 249; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., RA Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Kim E., Tiedje J., Richardson P.; RT "Complete sequence of chromosome 3 of Burkholderia multivorans ATCC RT 17616."; RL Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases. RN [3] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 17616; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., RA Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Kim E., Tiedje J., Richardson P.; RT "Complete sequence of chromosome3 of Burkholderia multivorans ATCC RT 17616."; RL Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000870; ABX19278.1; -; Genomic_DNA. DR EMBL; AP009387; BAG47703.1; -; Genomic_DNA. DR RefSeq; YP_001585570.1; NC_010087.1. DR RefSeq; YP_001941693.1; NC_010801.1. DR STRING; 395019.Bmul_5608; -. DR EnsemblBacteria; ABX19278; ABX19278; Bmul_5608. DR EnsemblBacteria; BAG47703; BAG47703; BMULJ_05896. DR GeneID; 5770702; -. DR GeneID; 6357035; -. DR KEGG; bmj:BMULJ_05896; -. DR KEGG; bmu:Bmul_5608; -. DR eggNOG; NOG278684; -. DR HOGENOM; HOG000263306; -. DR KO; K03198; -. DR OMA; FRRPYGF; -. DR OrthoDB; EOG6WHNT0; -. DR BioCyc; BMUL395019:GIYO-5891-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 87 AA; 9836 MW; B993F51EC261A1EF CRC64; MGGADRGLAI ANGTLTTLLC YTSMSPTFLV VGIVVHWVLR WLSSSDPWWR EVLVVYNRYP DVHEPLATAD VAARFRRPYG FDQELPL // ID A9BPW3_DELAS Unreviewed; 90 AA. AC A9BPW3; DT 15-JAN-2008, integrated into UniProtKB/TrEMBL. DT 15-JAN-2008, sequence version 1. DT 14-MAY-2014, entry version 28. DE SubName: Full=Putative conjugal transfer TrbD transmembrane protein; GN OrderedLocusNames=Daci_0436; OS Delftia acidovorans (strain DSM 14801 / SPH-1). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Delftia. OX NCBI_TaxID=398578; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 14801 / SPH-1; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Dalin E., Tice H., Pitluck S., Lowry S., Clum A., Schmutz J., RA Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Schleheck D., RA Richardson P.; RT "Complete sequence of Delftia acidovorans DSM 14801 / SPH-1."; RL Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000884; ABX33082.1; -; Genomic_DNA. DR RefSeq; YP_001561467.1; NC_010002.1. DR STRING; 398578.Daci_0436; -. DR EnsemblBacteria; ABX33082; ABX33082; Daci_0436. DR GeneID; 5745973; -. DR KEGG; dac:Daci_0436; -. DR PATRIC; 21634691; VBIDelAci41351_0450. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; PGLVLWI; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; DACI398578:GHK3-437-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 90 AA; 9658 MW; FE906954DC717309 CRC64; MSAPDTFADG FEVPLHRSLT EPILLGGAPR TVAIANGTLA AAVGLGLQLW IPGVVLWIVG HSLAVWGARV DPQFMQVFAR HIKHRPLLDV // ID A9BTS1_DELAS Unreviewed; 90 AA. AC A9BTS1; DT 15-JAN-2008, integrated into UniProtKB/TrEMBL. DT 15-JAN-2008, sequence version 1. DT 14-MAY-2014, entry version 30. DE SubName: Full=Putative conjugal transfer TrbD transmembrane protein; GN OrderedLocusNames=Daci_2697; OS Delftia acidovorans (strain DSM 14801 / SPH-1). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Delftia. OX NCBI_TaxID=398578; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 14801 / SPH-1; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Dalin E., Tice H., Pitluck S., Lowry S., Clum A., Schmutz J., RA Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Schleheck D., RA Richardson P.; RT "Complete sequence of Delftia acidovorans DSM 14801 / SPH-1."; RL Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000884; ABX35335.1; -; Genomic_DNA. DR RefSeq; YP_001563720.1; NC_010002.1. DR STRING; 398578.Daci_2697; -. DR EnsemblBacteria; ABX35335; ABX35335; Daci_2697. DR GeneID; 5748273; -. DR KEGG; dac:Daci_2697; -. DR PATRIC; 21639329; VBIDelAci41351_2731. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; AVWATKR; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; DACI398578:GHK3-2737-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 90 AA; 9559 MW; FBDC3DF96AC161E9 CRC64; MSAPDTFAAG FEVPLHRSLT EPILLGGAPR TVAIANGTLA AAVGLGLQLW IPGVVLWIVG HSLAMRGARV DPQFMAVFAR HIKHRPLLDV // ID A9EBB9_9RHOB Unreviewed; 67 AA. AC A9EBB9; DT 05-FEB-2008, integrated into UniProtKB/TrEMBL. DT 05-FEB-2008, sequence version 1. DT 03-APR-2013, entry version 6. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=OIHEL45_17676; OS Oceanibulbus indolifex HEL-45. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Oceanibulbus. OX NCBI_TaxID=391624; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=HEL-45; RA Wagner-Dobler I., Ferriera S., Johnson J., Kravitz S., Beeson K., RA Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.; RL Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ABID01000007; EDQ03847.1; -; Genomic_DNA. DR EnsemblBacteria; EDQ03847; EDQ03847; OIHEL45_17676. DR PATRIC; 25530234; VBIOceInd27211_3141. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 67 AA; 7529 MW; CD2AE44031401D34 CRC64; MVLATGVVLP FIWTKSMVFF LIGLVAYPIL WFVADREPHF FEVLRVSYGS VRPTKNRALH GGDSFGA // ID A9EBX4_9RHOB Unreviewed; 70 AA. AC A9EBX4; DT 05-FEB-2008, integrated into UniProtKB/TrEMBL. DT 05-FEB-2008, sequence version 1. DT 03-APR-2013, entry version 6. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=OIHEL45_18286; OS Oceanibulbus indolifex HEL-45. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Oceanibulbus. OX NCBI_TaxID=391624; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=HEL-45; RA Wagner-Dobler I., Ferriera S., Johnson J., Kravitz S., Beeson K., RA Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.; RL Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ABID01000008; EDQ03792.1; -; Genomic_DNA. DR EnsemblBacteria; EDQ03792; EDQ03792; OIHEL45_18286. DR PATRIC; 25530374; VBIOceInd27211_3210. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 70 AA; 7978 MW; 0104E997BE3FEC3A CRC64; MYAMVWLFGS VLLFVWVQHI VVLGVAALLY PVLWKAADWD PRFIDVMMTS LQETPPTRNR SIHGGDSYAP // ID A9EEH8_9RHOB Unreviewed; 92 AA. AC A9EEH8; DT 05-FEB-2008, integrated into UniProtKB/TrEMBL. DT 05-FEB-2008, sequence version 1. DT 03-APR-2013, entry version 6. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=OIHEL45_17256; OS Oceanibulbus indolifex HEL-45. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Oceanibulbus. OX NCBI_TaxID=391624; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=HEL-45; RA Wagner-Dobler I., Ferriera S., Johnson J., Kravitz S., Beeson K., RA Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.; RL Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ABID01000020; EDQ03384.1; -; Genomic_DNA. DR EnsemblBacteria; EDQ03384; EDQ03384; OIHEL45_17256. DR PATRIC; 25531052; VBIOceInd27211_3542. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 92 AA; 10272 MW; 96E216058E5B36F4 CRC64; MAERSPLFLG LARPPKYLGL PVGYLVVLAM GVVLPFIWTK SLIFFLIGII AYPVLWFVAD KEPHFFEVLR ISFGTVRPTK NRAHHGGDSF GA // ID A9H1Y0_GLUDA Unreviewed; 91 AA. AC A9H1Y0; DT 05-FEB-2008, integrated into UniProtKB/TrEMBL. DT 05-FEB-2008, sequence version 1. DT 14-MAY-2014, entry version 30. DE SubName: Full=Putative conjugal transfer protein trbD; GN Name=trbD; OrderedLocusNames=GDI0132; OS Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / OS PAl5). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Acetobacteraceae; Gluconacetobacter. OX NCBI_TaxID=272568; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 49037 / DSM 5601 / PAl5; RX PubMed=19775431; DOI=10.1186/1471-2164-10-450; RA Bertalan M., Albano R., de Padua V., Rouws L., Rojas C., Hemerly A., RA Teixeira K., Schwab S., Araujo J., Oliveira A., Franca L., RA Magalhaes V., Alqueres S., Cardoso A., Almeida W., Loureiro M.M., RA Nogueira E., Cidade D., Oliveira D., Simao T., Macedo J., Valadao A., RA Dreschsel M., Freitas F., Vidal M., Guedes H., Rodrigues E., RA Meneses C., Brioso P., Pozzer L., Figueiredo D., Montano H., RA Junior J., de Souza Filho G., Martin Quintana Flores V., Ferreira B., RA Branco A., Gonzalez P., Guillobel H., Lemos M., Seibel L., Macedo J., RA Alves-Ferreira M., Sachetto-Martins G., Coelho A., Santos E., RA Amaral G., Neves A., Pacheco A.B., Carvalho D., Lery L., Bisch P., RA Rossle S.C., Urmenyi T., Rael Pereira A., Silva R., Rondinelli E., RA von Kruger W., Martins O., Baldani J.I., Ferreira P.C.; RT "Complete genome sequence of the sugarcane nitrogen-fixing endophyte RT Gluconacetobacter diazotrophicus Pal5."; RL BMC Genomics 10:450-450(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM889285; CAP54075.1; -; Genomic_DNA. DR RefSeq; YP_001600424.1; NC_010125.1. DR EnsemblBacteria; CAP54075; CAP54075; GDI0132. DR GeneID; 5788882; -. DR KEGG; gdi:GDI_0132; -. DR PATRIC; 22055922; VBIGluDia122154_0152. DR eggNOG; COG5268; -. DR KO; K03198; -. DR OMA; GHFLAVW; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; GDIA272568:GJPS-138-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 91 AA; 9893 MW; 4546487418A937AE CRC64; MAGYDDDMVP GFHVPVHRSL TDPILLGGAP RAVAIANGTL AAAIALGLRL WLIGAAFWVV GHTLAVWGAR RDPLFIEVGR RHLRYPAWLR A // ID A9HCL4_GLUDA Unreviewed; 88 AA. AC A9HCL4; DT 05-FEB-2008, integrated into UniProtKB/TrEMBL. DT 05-FEB-2008, sequence version 1. DT 14-MAY-2014, entry version 31. DE SubName: Full=Putative conjugal transfer protein TrbD; GN Name=trbD; OrderedLocusNames=GDI1017; OS Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / OS PAl5). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Acetobacteraceae; Gluconacetobacter. OX NCBI_TaxID=272568; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 49037 / DSM 5601 / PAl5; RX PubMed=19775431; DOI=10.1186/1471-2164-10-450; RA Bertalan M., Albano R., de Padua V., Rouws L., Rojas C., Hemerly A., RA Teixeira K., Schwab S., Araujo J., Oliveira A., Franca L., RA Magalhaes V., Alqueres S., Cardoso A., Almeida W., Loureiro M.M., RA Nogueira E., Cidade D., Oliveira D., Simao T., Macedo J., Valadao A., RA Dreschsel M., Freitas F., Vidal M., Guedes H., Rodrigues E., RA Meneses C., Brioso P., Pozzer L., Figueiredo D., Montano H., RA Junior J., de Souza Filho G., Martin Quintana Flores V., Ferreira B., RA Branco A., Gonzalez P., Guillobel H., Lemos M., Seibel L., Macedo J., RA Alves-Ferreira M., Sachetto-Martins G., Coelho A., Santos E., RA Amaral G., Neves A., Pacheco A.B., Carvalho D., Lery L., Bisch P., RA Rossle S.C., Urmenyi T., Rael Pereira A., Silva R., Rondinelli E., RA von Kruger W., Martins O., Baldani J.I., Ferreira P.C.; RT "Complete genome sequence of the sugarcane nitrogen-fixing endophyte RT Gluconacetobacter diazotrophicus Pal5."; RL BMC Genomics 10:450-450(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM889285; CAP54960.1; -; Genomic_DNA. DR RefSeq; YP_001601296.1; NC_010125.1. DR EnsemblBacteria; CAP54960; CAP54960; GDI1017. DR GeneID; 5792274; -. DR KEGG; gdi:GDI_1017; -. DR PATRIC; 22057642; VBIGluDia122154_0999. DR KO; K03198; -. DR OMA; AVWATKR; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; GDIA272568:GJPS-1034-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 88 AA; 9388 MW; 5FD57FBAFE22F860 CRC64; MEPDSIPGFT APVHRALIEP ILLGGAPRTV AIVNGTLSAA IGLGLRLWIA GGIFWLVGHL AAVYAAKRDP AFVDVVRRHL RYPTHLVG // ID A9HQ67_GLUDA Unreviewed; 92 AA. AC A9HQ67; DT 05-FEB-2008, integrated into UniProtKB/TrEMBL. DT 05-FEB-2008, sequence version 1. DT 14-MAY-2014, entry version 29. DE SubName: Full=Putative conjugal transfer protein trbD; GN Name=trbD; OrderedLocusNames=GDI2743; OS Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / OS PAl5). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Acetobacteraceae; Gluconacetobacter. OX NCBI_TaxID=272568; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 49037 / DSM 5601 / PAl5; RX PubMed=19775431; DOI=10.1186/1471-2164-10-450; RA Bertalan M., Albano R., de Padua V., Rouws L., Rojas C., Hemerly A., RA Teixeira K., Schwab S., Araujo J., Oliveira A., Franca L., RA Magalhaes V., Alqueres S., Cardoso A., Almeida W., Loureiro M.M., RA Nogueira E., Cidade D., Oliveira D., Simao T., Macedo J., Valadao A., RA Dreschsel M., Freitas F., Vidal M., Guedes H., Rodrigues E., RA Meneses C., Brioso P., Pozzer L., Figueiredo D., Montano H., RA Junior J., de Souza Filho G., Martin Quintana Flores V., Ferreira B., RA Branco A., Gonzalez P., Guillobel H., Lemos M., Seibel L., Macedo J., RA Alves-Ferreira M., Sachetto-Martins G., Coelho A., Santos E., RA Amaral G., Neves A., Pacheco A.B., Carvalho D., Lery L., Bisch P., RA Rossle S.C., Urmenyi T., Rael Pereira A., Silva R., Rondinelli E., RA von Kruger W., Martins O., Baldani J.I., Ferreira P.C.; RT "Complete genome sequence of the sugarcane nitrogen-fixing endophyte RT Gluconacetobacter diazotrophicus Pal5."; RL BMC Genomics 10:450-450(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM889285; CAP56686.1; -; Genomic_DNA. DR RefSeq; YP_001602981.1; NC_010125.1. DR STRING; 272568.GDI_2743; -. DR EnsemblBacteria; CAP56686; CAP56686; GDI2743. DR GeneID; 5790368; -. DR KEGG; gdi:GDI_2743; -. DR PATRIC; 22060982; VBIGluDia122154_2645. DR KO; K03198; -. DR OMA; WAIGHIA; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; GDIA272568:GJPS-2784-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 92 AA; 9948 MW; 09EDE87E47A3C717 CRC64; MAVGYDDDAV PGFHVPVHRS LTDPILLGGA PRAVAIANGT LAAAIALGLR LWLIGAAFWI VGHTLAVWGA KRDPLFIEVG RRHLRYPAWL RT // ID A9HR83_GLUDA Unreviewed; 91 AA. AC A9HR83; DT 05-FEB-2008, integrated into UniProtKB/TrEMBL. DT 05-FEB-2008, sequence version 1. DT 14-MAY-2014, entry version 30. DE SubName: Full=Putative conjugal transfer protein trbD; GN Name=trbD; OrderedLocusNames=GDI2912; OS Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / OS PAl5). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Acetobacteraceae; Gluconacetobacter. OX NCBI_TaxID=272568; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 49037 / DSM 5601 / PAl5; RX PubMed=19775431; DOI=10.1186/1471-2164-10-450; RA Bertalan M., Albano R., de Padua V., Rouws L., Rojas C., Hemerly A., RA Teixeira K., Schwab S., Araujo J., Oliveira A., Franca L., RA Magalhaes V., Alqueres S., Cardoso A., Almeida W., Loureiro M.M., RA Nogueira E., Cidade D., Oliveira D., Simao T., Macedo J., Valadao A., RA Dreschsel M., Freitas F., Vidal M., Guedes H., Rodrigues E., RA Meneses C., Brioso P., Pozzer L., Figueiredo D., Montano H., RA Junior J., de Souza Filho G., Martin Quintana Flores V., Ferreira B., RA Branco A., Gonzalez P., Guillobel H., Lemos M., Seibel L., Macedo J., RA Alves-Ferreira M., Sachetto-Martins G., Coelho A., Santos E., RA Amaral G., Neves A., Pacheco A.B., Carvalho D., Lery L., Bisch P., RA Rossle S.C., Urmenyi T., Rael Pereira A., Silva R., Rondinelli E., RA von Kruger W., Martins O., Baldani J.I., Ferreira P.C.; RT "Complete genome sequence of the sugarcane nitrogen-fixing endophyte RT Gluconacetobacter diazotrophicus Pal5."; RL BMC Genomics 10:450-450(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM889285; CAP56855.1; -; Genomic_DNA. DR RefSeq; YP_001603145.1; NC_010125.1. DR STRING; 272568.GDI_2912; -. DR EnsemblBacteria; CAP56855; CAP56855; GDI2912. DR GeneID; 5791728; -. DR KEGG; gdi:GDI_2912; -. DR PATRIC; 22061234; VBIGluDia122154_2771. DR eggNOG; COG5268; -. DR KO; K03198; -. DR OMA; GAVFWIV; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; GDIA272568:GJPS-2953-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 91 AA; 9881 MW; B81E8D6A8EA085E2 CRC64; MAGYDDDAVP GFHVPVHRSL TDPILLGGAP RTLAIANGTL GAAISLGLRL WLVGAVFWIV GHSLAVWGAK RDPLFVEVGR RHLRYPAWLR T // ID A9I2D4_BORPD Unreviewed; 106 AA. AC A9I2D4; DT 05-FEB-2008, integrated into UniProtKB/TrEMBL. DT 05-FEB-2008, sequence version 1. DT 11-DEC-2013, entry version 25. DE SubName: Full=Type IV secretion system protein VirB3; GN Name=virB3; OrderedLocusNames=Bpet3704; OS Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Alcaligenaceae; Bordetella. OX NCBI_TaxID=340100; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-461 / DSM 12804 / CCUG 43448; RX PubMed=18826580; DOI=10.1186/1471-2164-9-449; RA Gross R., Guzman C.A., Sebaihia M., Martin dos Santos V.A.P., RA Pieper D.H., Koebnik R., Lechner M., Bartels D., Buhrmester J., RA Choudhuri J.V., Ebensen T., Gaigalat L., Herrmann S., Khachane A.N., RA Larisch C., Link S., Linke B., Meyer F., Mormann S., Nakunst D., RA Rueckert C., Schneiker-Bekel S., Schulze K., Voerholter F.-J., RA Yevsa T., Engle J.T., Goldman W.E., Puehler A., Goebel U.B., RA Goesmann A., Bloecker H., Kaiser O., Martinez-Arias R.; RT "The missing link: Bordetella petrii is endowed with both the RT metabolic versatility of environmental bacteria and virulence traits RT of pathogenic Bordetellae."; RL BMC Genomics 9:449-449(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM902716; CAP44047.1; -; Genomic_DNA. DR RefSeq; YP_001632315.1; NC_010170.1. DR STRING; 340100.Bpet3704; -. DR EnsemblBacteria; CAP44047; CAP44047; Bpet3704. DR GeneID; 5819130; -. DR KEGG; bpt:Bpet3704; -. DR PATRIC; 21169031; VBIBorPet31633_3746. DR eggNOG; bactNOG44967; -. DR KO; K03198; -. DR OMA; FTCVAIV; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BPET340100:GJBO-3761-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 106 AA; 12178 MW; 53E89BC654C21C78 CRC64; MAANTYPVFR GLGRKATFMG VPTKLLLGAF TCVAIVAMTA GLAWWGLLFI VIPTLAILTR DDDKALDVLW LELKTRRRNR NQRFWQGSSY ALQGYHRRRP WRALIK // ID A9IF58_BORPD Unreviewed; 90 AA. AC A9IF58; DT 05-FEB-2008, integrated into UniProtKB/TrEMBL. DT 05-FEB-2008, sequence version 1. DT 14-MAY-2014, entry version 29. DE SubName: Full=Conjugal transfer protein TrbD; GN Name=trbD2; OrderedLocusNames=Bpet4619; OS Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Alcaligenaceae; Bordetella. OX NCBI_TaxID=340100; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-461 / DSM 12804 / CCUG 43448; RX PubMed=18826580; DOI=10.1186/1471-2164-9-449; RA Gross R., Guzman C.A., Sebaihia M., Martin dos Santos V.A.P., RA Pieper D.H., Koebnik R., Lechner M., Bartels D., Buhrmester J., RA Choudhuri J.V., Ebensen T., Gaigalat L., Herrmann S., Khachane A.N., RA Larisch C., Link S., Linke B., Meyer F., Mormann S., Nakunst D., RA Rueckert C., Schneiker-Bekel S., Schulze K., Voerholter F.-J., RA Yevsa T., Engle J.T., Goldman W.E., Puehler A., Goebel U.B., RA Goesmann A., Bloecker H., Kaiser O., Martinez-Arias R.; RT "The missing link: Bordetella petrii is endowed with both the RT metabolic versatility of environmental bacteria and virulence traits RT of pathogenic Bordetellae."; RL BMC Genomics 9:449-449(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM902716; CAP44970.1; -; Genomic_DNA. DR RefSeq; YP_001633237.1; NC_010170.1. DR STRING; 340100.Bpet4619; -. DR EnsemblBacteria; CAP44970; CAP44970; Bpet4619. DR GeneID; 5819688; -. DR KEGG; bpt:Bpet4619; -. DR PATRIC; 21170839; VBIBorPet31633_4647. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; HGLAVWA; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; BPET340100:GJBO-4688-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 90 AA; 9640 MW; 54269A61F39DA1C9 CRC64; MTAMANLPEG FEAPLHRALT EPILLGGAPR TVAIANGTLA AAIGLGLQLW LPGLACWFVG HMLAVWGARA DVQFMQVFTR HVKHPTLLDV // ID A9IL81_BORPD Unreviewed; 90 AA. AC A9IL81; DT 05-FEB-2008, integrated into UniProtKB/TrEMBL. DT 05-FEB-2008, sequence version 1. DT 14-MAY-2014, entry version 28. DE SubName: Full=Conjugal transfer protein TrbD; GN Name=trbD1; OrderedLocusNames=Bpet2208; OS Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Alcaligenaceae; Bordetella. OX NCBI_TaxID=340100; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-461 / DSM 12804 / CCUG 43448; RX PubMed=18826580; DOI=10.1186/1471-2164-9-449; RA Gross R., Guzman C.A., Sebaihia M., Martin dos Santos V.A.P., RA Pieper D.H., Koebnik R., Lechner M., Bartels D., Buhrmester J., RA Choudhuri J.V., Ebensen T., Gaigalat L., Herrmann S., Khachane A.N., RA Larisch C., Link S., Linke B., Meyer F., Mormann S., Nakunst D., RA Rueckert C., Schneiker-Bekel S., Schulze K., Voerholter F.-J., RA Yevsa T., Engle J.T., Goldman W.E., Puehler A., Goebel U.B., RA Goesmann A., Bloecker H., Kaiser O., Martinez-Arias R.; RT "The missing link: Bordetella petrii is endowed with both the RT metabolic versatility of environmental bacteria and virulence traits RT of pathogenic Bordetellae."; RL BMC Genomics 9:449-449(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM902716; CAP42551.1; -; Genomic_DNA. DR RefSeq; YP_001630819.1; NC_010170.1. DR STRING; 340100.Bpet2208; -. DR EnsemblBacteria; CAP42551; CAP42551; Bpet2208. DR GeneID; 5819687; -. DR KEGG; bpt:Bpet2208; -. DR PATRIC; 21165880; VBIBorPet31633_2202. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; PGLVLWI; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; BPET340100:GJBO-2236-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 90 AA; 9584 MW; E25BC583A7DDACE9 CRC64; MNAPDTFAAG FEVPLHRSLT EPILLGGAPR TVAIANGTLA AAVGLGLQLW IPGVVLWIVG HSLAVWGARV DPQFMAVFAR HIKHRPLLDV // ID A9IWM8_BART1 Unreviewed; 102 AA. AC A9IWM8; DT 05-FEB-2008, integrated into UniProtKB/TrEMBL. DT 05-FEB-2008, sequence version 1. DT 14-MAY-2014, entry version 28. DE SubName: Full=VirB3 protein; GN Name=virB3; OrderedLocusNames=BT_1690; OS Bartonella tribocorum (strain CIP 105476 / IBS 506). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=382640; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CIP 105476 / IBS 506; RX PubMed=18037886; DOI=10.1038/ng.2007.38; RA Saenz H.L., Engel P., Stoeckli M.C., Lanz C., Raddatz G., RA Vayssier-Taussat M., Birtles R., Schuster S.C., Dehio C.; RT "Genomic analysis of Bartonella identifies type IV secretion systems RT as host adaptability factors."; RL Nat. Genet. 39:1469-1476(2007). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM260525; CAK02004.1; -; Genomic_DNA. DR RefSeq; YP_001609999.1; NC_010161.1. DR STRING; 382640.Btr_1690; -. DR GeneID; 5830690; -. DR KEGG; btr:Btr_1690; -. DR PATRIC; 20551220; VBIBarTri113218_1744. DR eggNOG; COG3702; -. DR HOGENOM; HOG000290758; -. DR KO; K03198; -. DR OMA; HDHNMFR; -. DR OrthoDB; EOG6VMTNS; -. DR BioCyc; BTRI382640:GJEK-1510-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 102 AA; 11627 MW; 5AAADDA571AED874 CRC64; MNEDTLFLAC TRPAMFAGVT MEAMALNVMA TSVLFILTSD FTMFGLGIGM HFILREVTRY DHNQFRVLFA WLNTRGKQKN LNRWGGGSTS PLRLVRTYKE LS // ID A9IYE1_BART1 Unreviewed; 112 AA. AC A9IYE1; DT 05-FEB-2008, integrated into UniProtKB/TrEMBL. DT 05-FEB-2008, sequence version 1. DT 14-MAY-2014, entry version 29. DE SubName: Full=Vbh3 protein; GN Name=vbh3; OrderedLocusNames=BT_2333; OS Bartonella tribocorum (strain CIP 105476 / IBS 506). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=382640; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CIP 105476 / IBS 506; RX PubMed=18037886; DOI=10.1038/ng.2007.38; RA Saenz H.L., Engel P., Stoeckli M.C., Lanz C., Raddatz G., RA Vayssier-Taussat M., Birtles R., Schuster S.C., Dehio C.; RT "Genomic analysis of Bartonella identifies type IV secretion systems RT as host adaptability factors."; RL Nat. Genet. 39:1469-1476(2007). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM260525; CAK02345.1; -; Genomic_DNA. DR RefSeq; YP_001610340.1; NC_010161.1. DR STRING; 382640.Btr_2333; -. DR GeneID; 5830794; -. DR KEGG; btr:Btr_2333; -. DR PATRIC; 20552500; VBIBarTri113218_2367. DR eggNOG; COG3702; -. DR HOGENOM; HOG000291346; -. DR KO; K03198; -. DR OMA; TIGIAMH; -. DR OrthoDB; EOG6VMTNS; -. DR BioCyc; BTRI382640:GJEK-1862-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 112 AA; 12553 MW; 1AF4DBDBCF6664AC CRC64; MSVKAMKEHG KLTEDTLFLA CTRPAMIAGV TVEAMGLNAI GAMILFIMTG NIFLVTIGIA MHFIFKEILK HDHNKFRILL TWQKTTIFAR NSSLWGGGSV SPLRLIRNYE EL // ID A9IZ42_BART1 Unreviewed; 102 AA. AC A9IZ42; DT 05-FEB-2008, integrated into UniProtKB/TrEMBL. DT 05-FEB-2008, sequence version 1. DT 14-MAY-2014, entry version 28. DE SubName: Full=TrwM protein; GN Name=trwM; OrderedLocusNames=BT_2517; OS Bartonella tribocorum (strain CIP 105476 / IBS 506). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=382640; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CIP 105476 / IBS 506; RX PubMed=18037886; DOI=10.1038/ng.2007.38; RA Saenz H.L., Engel P., Stoeckli M.C., Lanz C., Raddatz G., RA Vayssier-Taussat M., Birtles R., Schuster S.C., Dehio C.; RT "Genomic analysis of Bartonella identifies type IV secretion systems RT as host adaptability factors."; RL Nat. Genet. 39:1469-1476(2007). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM260525; CAK02480.1; -; Genomic_DNA. DR RefSeq; YP_001610475.1; NC_010161.1. DR STRING; 382640.Btr_2517; -. DR GeneID; 5830594; -. DR KEGG; btr:Btr_2517; -. DR PATRIC; 20552878; VBIBarTri113218_2556. DR eggNOG; COG3702; -. DR HOGENOM; HOG000261018; -. DR KO; K03198; -. DR OMA; FWGASSY; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BTRI382640:GJEK-1989-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 102 AA; 12086 MW; A56432CA7A8C1945 CRC64; MKSKEQRDFP LFKGATRVPT IWGVPMMPLI VMVMGVAIVA MMINIFLWII APPLWFIMVQ ITKNDDKAFR IWWLWIDTKF RNRNKGFWGA SSYSPSDYSK RR // ID A9LK56_SALEN Unreviewed; 917 AA. AC A9LK56; DT 05-FEB-2008, integrated into UniProtKB/TrEMBL. DT 05-FEB-2008, sequence version 1. DT 14-MAY-2014, entry version 19. DE SubName: Full=Pilx4 protein; GN Name=pilX4; ORFNames=pSE34_16; OS Salmonella enteritidis. OG Plasmid pSE34. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella. OX NCBI_TaxID=149539; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Sal550; PLASMID=pSE34; RA Wang C.-Y., Chen C.-L., Feng Y., Chu C., Chiu C.-H.; RL Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Sal550; PLASMID=pSE34; RX PubMed=19817860; DOI=10.1111/j.1574-695X.2009.00612.x; RA Chen C.L., Wang C.Y., Chu C., Su L.H., Chiu C.H.; RT "Functional and molecular characterization of pSE34 encoding a type IV RT secretion system in Salmonella enterica serotype Enteritidis phage RT type 34."; RL FEMS Immunol. Med. Microbiol. 57:274-283(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EU219533; ABX52022.1; -; Genomic_DNA. DR RefSeq; YP_001965338.1; NC_010860.1. DR ProteinModelPortal; A9LK56; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 917 AA; 105034 MW; 430AA13B9644B7F2 CRC64; MSTLFKGLTR PALIRGLGVP LYPFLGMCII CVLLGVWIHE AMYALILPGW YAIRRVTQFD ERFFDLLYLR TLVKGHPLSN KRFSAVHYAG SQYNEVDISK VDNFMKLKDQ SSVEELIPYS SHITDNIIVT KNRDLLATWQ IDGAYFECVD SEDLSILTDQ LNTLIRSFEG KFVTLYPHRI RCKKGVRPVF NSKIPFVNRV MNDYYESFPQ SEFFENKLFL TICFKPFTTE DKVTHFFSRS KKQKDIFKEP VNEMNEICDR LNTYLSRFHS RRLGLYEDHG VVYSDQLSLF QYLLSGRWQK VRVSSSPFYT YLGGKDLFFG NDAGQITASD HARYFRCIEI KDYFQETDAG ILDALMYLPV EYVVTSSFTA MDKQSAIKAL DDQIDKLEMT DDAAKSLLAD LKVGLDMVSS GYISFGKSHQ TLVVFADSPE RLVKDTNIVT STLEDLGLIV TYSTLSLGAA YFAQLPGNYT LRPRLSTLSS LNFAEMESFH NFFSGKEKGN TWGEKLITLR GSGNDIYHLN YHMTTEHQNF FGKNPTLGHT EILGTSNVGK TVLLMTKAFA AQQFGTPESF PANRKLKKLT TVFFDKDRAG EVGIRAMGGS YYRVKEGEPT GWNPAALPPT KRNIAFMKDL VRLLCTLNSE PLDDYQNSLI SDAVERLMQR SDRSYPVSKL RPLIQEPDDT ETKRHGLKAR LKPWTQGEEF GWVFDNREDT FDVDNLDVFG IDGTEFLDNK VLASAASFYL IYRVTMLADG RRLLIYMDEF WQWINNEAFR DFVYNKLKTG RKLDMVLVVA TQSPDELIKS PIAAAVREQC ATHIYLANPK AKRSEYVDGL QVRELYFDKI KAIDPLSRQF LVVKNPQRKG ESDDFAAFAR LELGKAAYYL PVLSASKPQL ELFDEIWKEG MKPEEWLDTY LEQANLI // ID A9MDI4_BRUC2 Unreviewed; 116 AA. AC A9MDI4; DT 05-FEB-2008, integrated into UniProtKB/TrEMBL. DT 05-FEB-2008, sequence version 1. DT 14-MAY-2014, entry version 27. DE SubName: Full=TraD protein; GN OrderedLocusNames=BCAN_B0070; OS Brucella canis (strain ATCC 23365 / NCTC 10854). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=483179; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 23365 / NCTC 10854; RA Setubal J.C., Bowns C., Boyle S., Crasta O.R., Czar M.J., RA Dharmanolla C., Gillespie J.J., Kenyon R.W., Lu J., Mane S., RA Mohapatra S., Nagrani S., Purkayastha A., Rajasimha H.K., RA Shallom J.M., Shallom S., Shukla M., Snyder E.E., Sobral B.W., RA Wattam A.R., Will R., Williams K., Yoo H., Bruce D., Detter C., RA Munk C., Brettin T.S.; RT "Brucella canis ATCC 23365 whole genome shotgun sequencing project."; RL Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000873; ABX63272.1; -; Genomic_DNA. DR RefSeq; YP_001594043.1; NC_010104.1. DR ProteinModelPortal; A9MDI4; -. DR STRING; 483179.BCAN_B0070; -. DR EnsemblBacteria; ABX63272; ABX63272; BCAN_B0070. DR GeneID; 5787016; -. DR KEGG; bcs:BCAN_B0070; -. DR PATRIC; 17833332; VBIBruCan25663_2290. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; FWGASSY; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BCAN483179:GJ7I-2276-MONOMER; -. DR PRO; PR:A9MDI4; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID A9WX95_BRUSI Unreviewed; 116 AA. AC A9WX95; DT 05-FEB-2008, integrated into UniProtKB/TrEMBL. DT 05-FEB-2008, sequence version 1. DT 14-MAY-2014, entry version 29. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=BSUIS_B0071; OS Brucella suis (strain ATCC 23445 / NCTC 10510). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=470137; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 23445 / NCTC 10510; RA Setubal J.C., Bowns C., Boyle S., Crasta O.R., Czar M.J., RA Dharmanolla C., Gillespie J.J., Kenyon R.W., Lu J., Mane S., RA Mohapatra S., Nagrani S., Purkayastha A., Rajasimha H.K., RA Shallom J.M., Shallom S., Shukla M., Snyder E.E., Sobral B.W., RA Wattam A.R., Will R., Williams K., Yoo H., Bruce D., Detter C., RA Munk C., Brettin T.S.; RT "Brucella suis ATCC 23445 whole genome shotgun sequencing project."; RL Submitted (DEC-2007) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000912; ABY39098.1; -; Genomic_DNA. DR RefSeq; YP_001621920.1; NC_010167.1. DR ProteinModelPortal; A9WX95; -. DR STRING; 470137.BSUIS_B0071; -. DR EnsemblBacteria; ABY39098; ABY39098; BSUIS_B0071. DR GeneID; 5836193; -. DR KEGG; bmt:BSUIS_B0071; -. DR PATRIC; 17864497; VBIBruSui83806_0068. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; FWGASSY; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BSUI470137:GJIC-2084-MONOMER; -. DR PRO; PR:A9WX95; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID B0BW69_RICRO Unreviewed; 95 AA. AC B0BW69; DT 26-FEB-2008, integrated into UniProtKB/TrEMBL. DT 26-FEB-2008, sequence version 1. DT 14-MAY-2014, entry version 26. DE SubName: Full=Channel protein; GN Name=virB3; OrderedLocusNames=RrIowa_0177; OS Rickettsia rickettsii (strain Iowa). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=452659; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Iowa; RX PubMed=18025092; DOI=10.1128/IAI.00952-07; RA Ellison D.W., Clark T.R., Sturdevant D.E., Virtaneva K., RA Porcella S.F., Hackstadt T.; RT "Genomic comparison of virulent Rickettsia rickettsii Sheila Smith and RT avirulent Rickettsia rickettsii Iowa."; RL Infect. Immun. 76:542-550(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000766; ABY72095.1; -; Genomic_DNA. DR RefSeq; YP_001649501.1; NC_010263.2. DR STRING; 452659.RrIowa_0177; -. DR EnsemblBacteria; ABY72095; ABY72095; RrIowa_0177. DR GeneID; 5850328; -. DR KEGG; rrj:RrIowa_0177; -. DR PATRIC; 17906240; VBIRicRic59104_0174. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; RRIC452659:GHSN-171-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10750 MW; 7253E0673CBA777C CRC64; MAGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID B0RK71_BARHN Unreviewed; 102 AA. AC B0RK71; DT 08-APR-2008, integrated into UniProtKB/TrEMBL. DT 08-APR-2008, sequence version 1. DT 25-JAN-2012, entry version 6. DE SubName: Full=TrwM protein; GN Name=trwM; OS Bartonella henselae (Rochalimaea henselae). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=38323; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Marseille; RX PubMed=18065487; DOI=10.1093/molbev/msm252; RA Nystedt B., Frank A.C., Thollesson M., Andersson S.G.; RT "Diversifying selection and concerted evolution of a type IV secretion RT system in Bartonella."; RL Mol. Biol. Evol. 25:287-300(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM905245; CAP18697.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 102 AA; 12088 MW; 4B7DFC0F7D0EFA98 CRC64; MKPQKHEAFP LFKGATRVPT IWGVPMMPLI VMAMSVAVIA MTINIFLWLI APPLWFVMAQ ITKNDDKAFR IWWLWIDTKF RNRNKNFWGA SSYSPSNYRK RR // ID B0RK97_BARHN Unreviewed; 102 AA. AC B0RK97; DT 08-APR-2008, integrated into UniProtKB/TrEMBL. DT 08-APR-2008, sequence version 1. DT 25-JAN-2012, entry version 6. DE SubName: Full=TrwM protein; GN Name=trwM; OS Bartonella henselae (Rochalimaea henselae). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=38323; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=IndoCat-11; RX PubMed=18065487; DOI=10.1093/molbev/msm252; RA Nystedt B., Frank A.C., Thollesson M., Andersson S.G.; RT "Diversifying selection and concerted evolution of a type IV secretion RT system in Bartonella."; RL Mol. Biol. Evol. 25:287-300(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM905246; CAP18723.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 102 AA; 12119 MW; 580BA6C9D7CEFEDC CRC64; MKPQKHEEFP LFKGATRVPT IWGVPMMPLI VMAMSVAVIA MTINIFLWLI APPLWFVMAQ ITKNDDKAFR IWWLWIDTKF RNRNKSFWGA SSYSPSNYRK RR // ID B0RKC9_BARGR Unreviewed; 102 AA. AC B0RKC9; DT 08-APR-2008, integrated into UniProtKB/TrEMBL. DT 08-APR-2008, sequence version 1. DT 14-MAY-2014, entry version 13. DE SubName: Full=TrwM protein; GN Name=trwM; OS Bartonella grahamii. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=33045; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=As4aup; RX PubMed=18065487; DOI=10.1093/molbev/msm252; RA Nystedt B., Frank A.C., Thollesson M., Andersson S.G.; RT "Diversifying selection and concerted evolution of a type IV secretion RT system in Bartonella."; RL Mol. Biol. Evol. 25:287-300(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM905248; CAP18755.1; -; Genomic_DNA. DR RefSeq; YP_002972702.1; NC_012846.1. DR GeneID; 7998880; -. DR KEGG; bgr:Bgr_19170; -. DR PATRIC; 20543363; VBIBarGra67450_2098. DR KO; K03198; -. DR OrthoDB; EOG68WR8V; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 102 AA; 12035 MW; 86114B841EE9C3A1 CRC64; MKSQEQKEFP LFKGATRVPT IWGVPMMPFI VMVMGVAVIA MTVSIFLWII APPLWFIMVQ ITKNDDKAFR IWWLWIDTKF RNRNKGFWGA SSYSPSDYSK RR // ID B0RRE9_XANCB Unreviewed; 103 AA. AC B0RRE9; DT 08-APR-2008, integrated into UniProtKB/TrEMBL. DT 08-APR-2008, sequence version 1. DT 14-MAY-2014, entry version 28. DE SubName: Full=VirB3-like type IV secretion system outer membrane component PtlB; GN Name=ptlB; OrderedLocusNames=xcc-b100_1684; OS Xanthomonas campestris pv. campestris (strain B100). OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=509169; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=B100; RX PubMed=18304669; DOI=10.1016/j.jbiotec.2007.12.013; RA Vorhoelter F.-J., Schneiker S., Goesmann A., Krause L., Bekel T., RA Kaiser O., Linke B., Patschkowski T., Rueckert C., Schmid J., RA Sidhu V.K., Sieber V., Tauch A., Watt S.A., Weisshaar B., Becker A., RA Niehaus K., Puehler A.; RT "The genome of Xanthomonas campestris pv. campestris B100 and its use RT for the reconstruction of metabolic pathways involved in xanthan RT biosynthesis."; RL J. Biotechnol. 134:33-45(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM920689; CAP51034.1; -; Genomic_DNA. DR RefSeq; YP_001903090.1; NC_010688.1. DR STRING; 509169.xccb100_1684; -. DR EnsemblBacteria; CAP51034; CAP51034; xcc-b100_1684. DR GeneID; 6321883; -. DR KEGG; xca:xccb100_1684; -. DR PATRIC; 24083220; VBIXanCam108527_1712. DR eggNOG; COG3702; -. DR KO; K03198; -. DR OMA; MAKRDEM; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; XCAM509169:GHW4-1714-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 103 AA; 12149 MW; 92517F9FEA947563 CRC64; MHKDVLFRGC TRPAMFLGVP YIPFFIGAGG GLLLGMYINL WYLFTIPVII FGMQQMAKRD EMIFRLLGLR WLFRMRARNL QRYSGMWVFN PNEYRKGPPG KPR // ID B0SV65_CAUSK Unreviewed; 93 AA. AC B0SV65; DT 08-APR-2008, integrated into UniProtKB/TrEMBL. DT 08-APR-2008, sequence version 1. DT 14-MAY-2014, entry version 30. DE SubName: Full=Conjugal transfer protein TrbB; GN OrderedLocusNames=Caul_3829; OS Caulobacter sp. (strain K31). OC Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; OC Caulobacteraceae; Caulobacter. OX NCBI_TaxID=366602; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=K31; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Dalin E., Tice H., Pitluck S., Bruce D., Goodwin L., Thompson L.S., RA Brettin T., Detter J.C., Han C., Schmutz J., Larimer F., Land M., RA Hauser L., Kyrpides N., Kim E., Stephens C., Richardson P.; RT "Complete sequence of chromosome of Caulobacter sp. K31."; RL Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000927; ABZ72955.1; -; Genomic_DNA. DR RefSeq; YP_001685453.1; NC_010338.1. DR STRING; 366602.Caul_3829; -. DR EnsemblBacteria; ABZ72955; ABZ72955; Caul_3829. DR GeneID; 5901291; -. DR KEGG; cak:Caul_3829; -. DR PATRIC; 21320810; VBICauSp18104_4231. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; GHFLAVW; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; CSP366602:GH0Y-3878-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9871 MW; B09451290081413F CRC64; MAGMVDHAAE VPGFSVPVHR ALTEHILLGG APRAIAILNG TLAAALGLGL RLWLVGLGLW ALGHFTAVWA AKRDPMFVDV VRRHLRIPGH LGV // ID B0T6U2_CAUSK Unreviewed; 94 AA. AC B0T6U2; DT 08-APR-2008, integrated into UniProtKB/TrEMBL. DT 08-APR-2008, sequence version 1. DT 14-MAY-2014, entry version 31. DE SubName: Full=Putative conjugal transfer TrbD transmembrane protein; GN OrderedLocusNames=Caul_2029; OS Caulobacter sp. (strain K31). OC Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; OC Caulobacteraceae; Caulobacter. OX NCBI_TaxID=366602; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=K31; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Dalin E., Tice H., Pitluck S., Bruce D., Goodwin L., Thompson L.S., RA Brettin T., Detter J.C., Han C., Schmutz J., Larimer F., Land M., RA Hauser L., Kyrpides N., Kim E., Stephens C., Richardson P.; RT "Complete sequence of chromosome of Caulobacter sp. K31."; RL Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000927; ABZ71157.1; -; Genomic_DNA. DR RefSeq; YP_001683655.1; NC_010338.1. DR STRING; 366602.Caul_2029; -. DR EnsemblBacteria; ABZ71157; ABZ71157; Caul_2029. DR GeneID; 5899484; -. DR KEGG; cak:Caul_2029; -. DR PATRIC; 21317108; VBICauSp18104_2414. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; WIPGLVV; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; CSP366602:GH0Y-2042-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 94 AA; 9847 MW; F745418DC6169DBF CRC64; MTGPATSSGV GVSGFEIPLH RALTAPILLG GAPRSIAILN GTLAGALGLG LQQWIPGLVV WVIGHSLAVF AAKRDPDFAP VLMRHLRQKG WLRC // ID B0T8Q4_CAUSK Unreviewed; 88 AA. AC B0T8Q4; DT 08-APR-2008, integrated into UniProtKB/TrEMBL. DT 08-APR-2008, sequence version 1. DT 14-MAY-2014, entry version 30. DE SubName: Full=Conjugal transfer protein TrbD; GN OrderedLocusNames=Caul_2270; OS Caulobacter sp. (strain K31). OC Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; OC Caulobacteraceae; Caulobacter. OX NCBI_TaxID=366602; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=K31; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Dalin E., Tice H., Pitluck S., Bruce D., Goodwin L., Thompson L.S., RA Brettin T., Detter J.C., Han C., Schmutz J., Larimer F., Land M., RA Hauser L., Kyrpides N., Kim E., Stephens C., Richardson P.; RT "Complete sequence of chromosome of Caulobacter sp. K31."; RL Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000927; ABZ71397.1; -; Genomic_DNA. DR RefSeq; YP_001683895.1; NC_010338.1. DR STRING; 366602.Caul_2270; -. DR EnsemblBacteria; ABZ71397; ABZ71397; Caul_2270. DR GeneID; 5899725; -. DR KEGG; cak:Caul_2270; -. DR PATRIC; 21317590; VBICauSp18104_2652. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; HGLAVWA; -. DR BioCyc; CSP366602:GH0Y-2286-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 88 AA; 9360 MW; 604290ACA356938B CRC64; MSGDRAAVFV APVYRALTEP MLLAGAPRAI ALVNGTLAAA LGLGLRLWLV GVGVWLVGHG LAVWAARHDP MIFDVGRRHV RVPARLEV // ID B0T9G7_CAUSK Unreviewed; 87 AA. AC B0T9G7; DT 08-APR-2008, integrated into UniProtKB/TrEMBL. DT 08-APR-2008, sequence version 1. DT 14-MAY-2014, entry version 23. DE SubName: Full=Conjugal transfer protein; GN OrderedLocusNames=Caul_5222; OS Caulobacter sp. (strain K31). OG Plasmid pCAUL01. OC Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; OC Caulobacteraceae; Caulobacter. OX NCBI_TaxID=366602; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=K31; PLASMID=pCAUL01; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Dalin E., Tice H., Pitluck S., Bruce D., Goodwin L., Thompson L.S., RA Brettin T., Detter J.C., Han C., Schmutz J., Larimer F., Land M., RA Hauser L., Kyrpides N., Kim E., Stephens C., Richardson P.; RT "Complete sequence of plasmid1 pCAUL01 of Caulobacter sp. K31."; RL Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000928; ABZ74342.1; -; Genomic_DNA. DR RefSeq; YP_001676656.1; NC_010335.1. DR STRING; 366602.Caul_5222; -. DR EnsemblBacteria; ABZ74342; ABZ74342; Caul_5222. DR GeneID; 5897392; -. DR KEGG; cak:Caul_5222; -. DR PATRIC; 21312861; VBICauSp18104_0306. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR OrthoDB; EOG6WHNT0; -. DR BioCyc; CSP366602:GH0Y-5276-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 87 AA; 9578 MW; 7613F4C3F34209D2 CRC64; MAEVPDGFEI DLHGALSDPI TIAGVPRMTA ILIATLTAVL ALGLQSPWIG LPLGFGLYVT AFWMAKRDPY VFDILRRHLR QPVYLEG // ID B0T9U3_CAUSK Unreviewed; 88 AA. AC B0T9U3; DT 08-APR-2008, integrated into UniProtKB/TrEMBL. DT 08-APR-2008, sequence version 1. DT 14-MAY-2014, entry version 25. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Caul_5373; OS Caulobacter sp. (strain K31). OG Plasmid pCAUL02. OC Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; OC Caulobacteraceae; Caulobacter. OX NCBI_TaxID=366602; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=K31; PLASMID=pCAUL02; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., RA Dalin E., Tice H., Pitluck S., Bruce D., Goodwin L., Thompson L.S., RA Brettin T., Detter J.C., Han C., Schmutz J., Larimer F., Land M., RA Hauser L., Kyrpides N., Kim E., Stephens C., Richardson P.; RT "Complete sequence of plasmid2 pCAUL02 of Caulobacter sp. K31."; RL Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000929; ABZ74492.1; -; Genomic_DNA. DR RefSeq; YP_001672151.1; NC_010333.1. DR STRING; 366602.Caul_5373; -. DR EnsemblBacteria; ABZ74492; ABZ74492; Caul_5373. DR GeneID; 5897234; -. DR KEGG; cak:Caul_5373; -. DR PATRIC; 21312416; VBICauSp18104_0084. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OrthoDB; EOG6WHNT0; -. DR BioCyc; CSP366602:GH0Y-5427-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 88 AA; 9579 MW; C4D1EB0DCFE3DA37 CRC64; MAQSQVEGFE IAFHSSLSEP VTIAGVPRMI AVLNGTLTAV LALGLQVPLI GIPFGLAIHG ACYWLAKRDP YFFDALGRHI RQRPYLDA // ID B0ZB83_9BURK Unreviewed; 107 AA. AC B0ZB83; DT 08-APR-2008, integrated into UniProtKB/TrEMBL. DT 08-APR-2008, sequence version 1. DT 14-MAY-2014, entry version 11. DE SubName: Full=VirB3; GN Name=virB3; OS Collimonas fungivorans. OG Plasmid pTer331. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Oxalobacteraceae; Collimonas. OX NCBI_TaxID=158899; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Ter331; PLASMID=pTer331; RX PubMed=18355297; DOI=10.1111/j.1574-6941.2008.00472.x; RA Mela F., Fritsche K., Boersma H., van Elsas J.D., Bartels D., RA Meyer F., de Boer W., van Veen J.A., Leveau J.H.; RT "Comparative genomics of the pIPO2/pSB102 family of environmental RT plasmids: sequence, evolution, and ecology of pTer331 isolated from RT Collimonas fungivorans Ter331."; RL FEMS Microbiol. Ecol. 66:45-62(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EU315244; ABZ01504.1; -; Genomic_DNA. DR RefSeq; YP_001672054.1; NC_010332.1. DR GeneID; 5896981; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 107 AA; 12109 MW; D9D6F488DB7E896D CRC64; MSAPMEEFDP RDPLFKGCTR PAMMFGVPLV PLAAVSVVVI LLSVWTTVFF AATLVPIILT MRQIAKSDDQ QFRLLGLKLL FRGVNYNHNA KFWKASAYSP FAFKKRK // ID B0ZDY6_ECOLX Unreviewed; 917 AA. AC B0ZDY6; DT 08-APR-2008, integrated into UniProtKB/TrEMBL. DT 08-APR-2008, sequence version 1. DT 14-MAY-2014, entry version 18. DE SubName: Full=Pilx3-4 protein; GN Name=pilx3-4; ORFNames=pOLA52_32; OS Escherichia coli. OG Plasmid pOLA52. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=562; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pOLA52; RX PubMed=15328093; DOI=10.1128/AAC.48.9.3332-3337.2004; RA Hansen L.H., Johannesen E., Burmolle M., Sorensen A.H., Sorensen S.J.; RT "Plasmid-encoded multidrug efflux pump conferring resistance to RT olaquindox in Escherichia coli."; RL Antimicrob. Agents Chemother. 48:3332-3337(2004). RN [2] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pOLA52; RX PubMed=18440636; DOI=10.1016/j.plasmid.2008.03.003; RA Norman A., Hansen L.H., She Q., Sorensen S.J.; RT "Nucleotide sequence of pOLA52: a conjugative IncX1 plasmid from RT Escherichia coli which enables biofilm formation and multidrug RT efflux."; RL Plasmid 60:59-74(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EU370913; ABZ89603.1; -; Genomic_DNA. DR RefSeq; YP_001693203.1; NC_010378.1. DR ProteinModelPortal; B0ZDY6; -. DR STRING; 585056.p2ECUMN_0030; -. DR GeneID; 5962021; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 917 AA; 105075 MW; 6FBA3657F166B1C1 CRC64; MSTLFKGLTR PALIRGLGVP LYPFLGMCII CVLLGVWIHE VMYALILPGW YAIRRVTQFD ERFFDLLYLR TLVKGHPLSN KRFSAVHYAG SQYDEVDISK VDNFMKLKDQ SSVEELIPYS SHITDNIIVT KNRDLLATWQ IDGAYFECVD SEDLSILTDQ LNTLIRSFEG KSVTLYPHRI RCKKDVRPVF NSKIPFVNRV MNDYYESFPQ SEFFENKLFL TICFKPFTTE DKVTHFFSRS KKQKDIFKEP VNEMNEICDR LNTYLSRFHS RRLGLYEDHG VVYSDQLSLF QYLLSGRWQK VRVSSSPFYT YLGGKDLFFG NDAGQITASD HARYFRCIEI KDYFQETDAG ILDALMYLPV EYVVTSSFTA MDKQSAIKAL DDQIDKLEMT DDAAKSLLAD LKVGLDMVSS GYISFGKSHQ TLVVFADSPE RLVKDTNIVT STLEDLGLIV TYSTLSLGAA YFAQLPGNYT LRPRLSTLSS LNFAEMESFH NFFSGKEKGN TWGEKLITLR GSGNDIYHLN YHMTTEHQNF FGKNPTLGHT EILGTSNVGK TVLLMTKAFA AQQFGTPESF PANRKLKKLT TVFFDKDRAG EVGIRAMGGS YYRVKEGEPT GWNPAALPPT KRNIAFMKDL VRLLCTLNSE PLDDYQNSLI SDAVERLMQR SDRSYPISKL RPLIQEPDDT ETKRHGLKAR LKPWTQGEEF GWVFDNREDT FDVDNLDVFG IDGTEFLDNK VLASAASFYL IYRVTMLADG RRLLIYMDEF WQWINNEAFR DFVYNKLKTG RKLDMVLVVA TQSPDELIKS PIAAAVREQC ATHIYLANPK AKRSEYVDGL QVRELYFDKI KAIDPLSRQF LVVKNPQRKG ESDDFAAFAR LELGKAAYYL PVLSASKPQL ELFDEIWKEG MKPEEWLDTY LEQANLI // ID B1F9A3_9BURK Unreviewed; 142 AA. AC B1F9A3; DT 29-APR-2008, integrated into UniProtKB/TrEMBL. DT 29-APR-2008, sequence version 1. DT 03-APR-2013, entry version 6. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN ORFNames=BamIOP4010DRAFT_0612; OS Burkholderia ambifaria IOP40-10. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia; Burkholderia cepacia complex. OX NCBI_TaxID=396596; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=IOP40-10; RG US DOE Joint Genome Institute (JGI-PGF); RA Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Bruce D., Goodwin L., Pitluck S., Larimer F., Land M.L., RA Hauser L., Tiedje J., Richardson P.; RT "Sequencing of the draft genome and assembly of Burkholderia ambifaria RT IOP40-10."; RL Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ABLC01000006; EDT05875.1; -; Genomic_DNA. DR EnsemblBacteria; EDT05875; EDT05875; BamIOP4010DRAFT_0612. DR PATRIC; 38365849; VBIBurAmb78662_0623. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 142 AA; 16006 MW; F633C9709E40DBE1 CRC64; MEDERTLYPS YAGLNRVAMI GGVPMFPALI IGCASLISGM VGGFVLGPGG LLIGSAGVPI FMFFRFVCET DDQALRLFWL EFRCWFDRRR VSVFGKTYTL APMRYGRDVG VYTRSFAHGK DLERFEALRQ SLLTQVQEDN DE // ID B1FE06_9BURK Unreviewed; 106 AA. AC B1FE06; DT 29-APR-2008, integrated into UniProtKB/TrEMBL. DT 29-APR-2008, sequence version 1. DT 03-APR-2013, entry version 6. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN ORFNames=BamIOP4010DRAFT_2266; OS Burkholderia ambifaria IOP40-10. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia; Burkholderia cepacia complex. OX NCBI_TaxID=396596; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=IOP40-10; RG US DOE Joint Genome Institute (JGI-PGF); RA Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Bruce D., Goodwin L., Pitluck S., Larimer F., Land M.L., RA Hauser L., Tiedje J., Richardson P.; RT "Sequencing of the draft genome and assembly of Burkholderia ambifaria RT IOP40-10."; RL Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ABLC01000043; EDT04218.1; -; Genomic_DNA. DR EnsemblBacteria; EDT04218; EDT04218; BamIOP4010DRAFT_2266. DR PATRIC; 38369220; VBIBurAmb78662_2269. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 106 AA; 11856 MW; 869848D23D0A130C CRC64; MYSLKDPVFK GCTRPAMLWG VPLVPLLMIG GGTLIPAIWA LLASPPLGVA ILLLLLPVFV AMRVITRHDD QRLAQYALRV RMVARQGNRR FWGAHAYAPV RLKRRA // ID B1G402_9BURK Unreviewed; 118 AA. AC B1G402; DT 29-APR-2008, integrated into UniProtKB/TrEMBL. DT 29-APR-2008, sequence version 1. DT 03-APR-2013, entry version 6. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN ORFNames=BgramDRAFT_4100; OS Burkholderia graminis C4D1M. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia. OX NCBI_TaxID=396598; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=C4D1M; RG US DOE Joint Genome Institute (JGI-PGF); RA Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Bruce D., Goodwin L., Pitluck S., Larimer F., Land M.L., RA Hauser L., Tiedje J., Richardson P.; RT "Sequencing of the draft genome and assembly of Burkholderia graminis RT C4D1M."; RL Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ABLD01000013; EDT09048.1; -; Genomic_DNA. DR EnsemblBacteria; EDT09048; EDT09048; BgramDRAFT_4100. DR PATRIC; 26880934; VBIBurGra66597_4193. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 118 AA; 13376 MW; A58870E448C79B98 CRC64; MKPHMNPDTN PRMNPLCDPV FKGCTRPAML WGVPLVPFLI VGGSILIPAI WALLASPPVG VGIVLLLIPV FVTMRSVTRH DDQRLTQLAL CIRMVSRQRN RRFWGAHAYV PLRIRRRC // ID B1K7J9_BURCC Unreviewed; 106 AA. AC B1K7J9; DT 29-APR-2008, integrated into UniProtKB/TrEMBL. DT 29-APR-2008, sequence version 1. DT 14-MAY-2014, entry version 25. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Bcenmc03_4201; OS Burkholderia cenocepacia (strain MC0-3). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia; Burkholderia cepacia complex. OX NCBI_TaxID=406425; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MC0-3; RA Copeland A., Lucas S., Lapidus A., Barry K., Bruce D., Goodwin L., RA Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., RA Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., RA Hauser L., Kyrpides N., Mikhailova N., Tiedje J., Richardson P.; RT "Complete sequence of chromosome 2 of Burkholderia cenocepacia MC0- RT 3."; RL Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000959; ACA93352.1; -; Genomic_DNA. DR RefSeq; YP_001777842.1; NC_010515.1. DR STRING; 406425.Bcenmc03_4201; -. DR EnsemblBacteria; ACA93352; ACA93352; Bcenmc03_4201. DR GeneID; 6127034; -. DR KEGG; bcm:Bcenmc03_4201; -. DR PATRIC; 19098075; VBIBurCen61509_5504. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; FWGASSY; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BCEN406425:GHD9-4279-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 106 AA; 11883 MW; E118462807CA32C6 CRC64; MDTLSDPVFK GCTRPAMLWG VPLVPLLTVG GGMLIPAIWV LMASAALGVA IVLLIVPVFA TMRMITRQDD QRLAQRMLRA KMRLHQRNRR FWGAHAYAPI RFKARG // ID B1M9S1_METRJ Unreviewed; 113 AA. AC B1M9S1; DT 29-APR-2008, integrated into UniProtKB/TrEMBL. DT 29-APR-2008, sequence version 1. DT 14-MAY-2014, entry version 26. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Mrad2831_6324; OS Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM OS 2831). OG Plasmid pMRAD02. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Methylobacteriaceae; Methylobacterium. OX NCBI_TaxID=426355; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 27329 / DSM 1819 / JCM 2831; PLASMID=pMRAD02; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., RA Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., RA Hauser L., Kyrpides N., Mikhailova N., Marx C.J., Richardson P.; RT "Complete sequence of plasmid2 of Methylobacterium radiotolerans JCM RT 2831."; RL Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001003; ACB28246.1; -; Genomic_DNA. DR RefSeq; YP_001766489.1; NC_010509.1. DR STRING; 426355.Mrad2831_6324; -. DR EnsemblBacteria; ACB28246; ACB28246; Mrad2831_6324. DR GeneID; 6141894; -. DR KEGG; mrd:Mrad2831_6324; -. DR PATRIC; 22580018; VBIMetRad70578_5857. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; FWGASSY; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; MRAD426355:GJB5-6401-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 113 AA; 12674 MW; 08259B7B534DD746 CRC64; MATGSDSTGS RRATYTKDPL FKGCTRPAMI MGVPVVPFVI VGGGLMLVTI WTSIFCIVLV PVAIMVMRHI TKSDDQQFRL LGLKIFFRLI NYNRNGSFWQ SSAWSPVAFK KRK // ID B1MU17_SALDU Unreviewed; 917 AA. AC B1MU17; DT 29-APR-2008, integrated into UniProtKB/TrEMBL. DT 29-APR-2008, sequence version 1. DT 14-MAY-2014, entry version 17. DE SubName: Full=Pilx4 protein; GN Name=pilX4; ORFNames=pOU1114_020; OS Salmonella dublin. OG Plasmid pOU1114. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella. OX NCBI_TaxID=98360; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=OU7025; PLASMID=pOU1114; RA Chu C., Feng Y., Chien A.C., Hu S., Chu C.H., Chiu C.H.; RT "Evolution of genes on the Salmonella Virulence plasmid phylogeny RT revealed from sequencing of the virulence plasmids of S. enterica RT serotype Dublin and comparative analysis."; RL Genomics 92:339-343(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DQ115387; ACA51102.1; -; Genomic_DNA. DR RefSeq; YP_001716082.1; NC_010421.1. DR ProteinModelPortal; B1MU17; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 917 AA; 105048 MW; 430AA6989644BA62 CRC64; MSTLFKGLTR PALIRGLGVP LYPFLGMCII CVLLGVWIHE AMYALILPGW YAIRRVTQFD ERFFDLLYLR TLVKGHPLSN KRFSAVHYAG SQYNEVDISK VDNFMKLKDQ SSVEELIPYS SHITDNIIVT KNRDLLATWQ IDGAYFECVD SEDLSILTDQ LNTLIRSFEG KFVTLYPHRI RCKKGVRPVF NSKIPFVNRV MNDYYESFPQ SEFFENKLFL TICFKPFTTE DKVTHFFSRS KKQKDIFKEP VNEMNEICDR LNTYLSRFHS RRLGLYEDHG VVYSDQLSLF QYLLSGRWQK VRVSSSPFYT YLGGKDLFFG NDAGQITASD HARYFRCIEI KDYFQETDAG ILDALMYLPV EYVVTSSFTA MDKQSAIKAL DDQIDKLEMT DDAAKSLLAD LKVGLDMVSS GYISFGKSHQ TLVVFADSPE RLVKDTNIVT STLEDLGLIV TYSTLSLGAA YFAQLPGNYT LRPRLSTLSS LNFAEMESFH NFFSGKEKGN TWGEKLITLR GSGNDIYHLN YHMTTEHQNF FGKNPTLGHT EILGTSNVGK TVLLMTKAFA AQQFGTPESF PANRKLKKLT TVFFDKDRAG EVGIRAMGGS YYRVKEGEPT GWNPAALPPT KRNIAFMKDL VRLLCTLNSE PLDDYQNSLI SDAVERLMQR SDRSYPISKL RPLIQEPDDT ETKRHGLKAR LKPWTQGEEF GWVFDNREDT FDVDNLDVFG IDGTEFLDNK VLASAASFYL IYRVTMLADG RRLLIYMDEF WQWINNEAFR DFVYNKLKTG RKLDMVLVVA TQSPDELIKS PIAAAVREQC ATHIYLANPK AKRSEYVDGL QVRELYFDKI KAIDPLSRQF LVVKNPQRKG ESDDFAAFAR LELGKAAYYL PVLSASKPQL ELFDEIWKEG MKPEEWLDTY LEQANLI // ID B1MUA1_SALDU Unreviewed; 917 AA. AC B1MUA1; DT 29-APR-2008, integrated into UniProtKB/TrEMBL. DT 29-APR-2008, sequence version 1. DT 14-MAY-2014, entry version 22. DE SubName: Full=Pilx4 protein; DE SubName: Full=VirB4; GN Name=pilX4; ORFNames=pOU1115_058, pSD853_77_70; OS Salmonella dublin. OG Plasmid pOU1115, and Plasmid pSD_77. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella. OX NCBI_TaxID=98360; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Lane OU7432; PLASMID=pOU1115; RA Chu C., Feng Y., Chien A.C., Hu S., Chu C.H., Chiu C.H.; RT "Evolution of genes on the Salmonella Virulence plasmid phylogeny RT revealed from sequencing of the virulence plasmids of S. enterica RT serotype Dublin and comparative analysis."; RL Genomics 92:339-343(2008). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=853; PLASMID=pSD_77; RA Han J., Lynne A.M., David D.E., Nayak R., Foley S.L.; RT "Sequencing of plasmids from a multi-antimicrobial resistant RT Salmonella enterica serovar Dublin strain."; RL Food Res. Intern. 45:931-934(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DQ115388; ACA51161.1; -; Genomic_DNA. DR EMBL; JF267653; AEA95651.1; -; Genomic_DNA. DR RefSeq; YP_001716166.1; NC_010422.1. DR RefSeq; YP_006954947.1; NC_019106.1. DR ProteinModelPortal; B1MUA1; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 917 AA; 105024 MW; 5C36338193E399B5 CRC64; MSTLFKGLTR PALIRGLGVP LYPFLGMCII CVLLGVWIHE AMYALILPGW YAIRRVTQFD ERFFDLLYLR TLVKGHPLSN KRFSAVHYAG SQYDEVDISK VDNFMKLKDQ SSVEELIPYS SHITDNIIVT KNRDLLATWQ IDGAYFECVD SEDLSILTDQ LNTLIRSFEG KSVTLYPHRI RCKKDVRPVF NSKIPFVNRV MNDYYESFPQ SEFFENKLFL TICFKPFTTE DKVTHFFSRS KKQKDIFKEP VNEMNEICDR LNTYLSRFHS RRLGLYEDHG VVYSDQLSLF QYLLSGRWQK VRVSSSPFYT YLGGKDLFFG NDAGQITASD HARYFRCIEI KDYFQETDAG ILDALMYLPV EYVVTSSFTA MDKQSAIKAL DDQIDKLEMT DDAAKSLLAD LKVGLDMVSS GYISFGKSHQ TLVVFADSPE RLVKDTNIVT STLEDLGLIV TYSTLSLGAA YFAQLPGNYT LRPRLSTLSS LNFAEMESFH NFFSGKEKGN TWGEKLITLR GSGNDIYHLN YHMTTEHQNF FGKNPTLGNT EILGTSNVGK TVLLMTKAFA AQQFGTPESF PANRKLKKLT TVFFDKDRAG EVGIRAMGGS YYRVKEGEPT GWNPAALPPT KRNIAFMKDL VRLLCTLNSE PLDDYQNSLI SDAVERLMQR SDRSYPISKL RPLIQEPDDT ETKRHGLKAR LKPWTQGEEF GWVFDNREDT FDVDNLDVFG IDGTEFLDNK VLASAASFYL IYRVTMLADG RRLLIYMDEF WQWINNEAFR DFVYNKLKTG RKLDMVLVVA TQSPDELIKS PIAAAVREQC ATHIYLANPK AKRSEYVDGL QVRELYFDKI KAIDPLSRQF LVVKNPQRKG ESDDFAAFAR LELGKAAYYL PVLSASKPQL ELFDEIWKEG MKPEEWLDTY LEQANLI // ID B1T0E8_9BURK Unreviewed; 87 AA. AC B1T0E8; DT 20-MAY-2008, integrated into UniProtKB/TrEMBL. DT 20-MAY-2008, sequence version 1. DT 19-FEB-2014, entry version 7. DE SubName: Full=Uncharacterized protein; GN ORFNames=BamMEX5DRAFT_1264; OS Burkholderia ambifaria MEX-5. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia; Burkholderia cepacia complex. OX NCBI_TaxID=396597; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MEX-5; RG US DOE Joint Genome Institute (JGI-PGF); RA Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Bruce D., Goodwin L., Pitluck S., Larimer F., Land M.L., RA Hauser L., Tiedje J., Richardson P.; RT "Sequencing of the draft genome and assembly of Burkholderia ambifaria RT MEX-5."; RL Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ABLK01000025; EDT42959.1; -; Genomic_DNA. DR EnsemblBacteria; EDT42959; EDT42959; BamMEX5DRAFT_1264. DR PATRIC; 38381984; VBIBurAmb126694_1275. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 87 AA; 9832 MW; DB68F00FC71280E5 CRC64; MGGADRGLAI ANGTLTALLC YSSMSPIYLV IGIVVHWVLR WLSSSDPWWK EVLVVYNRYP DVHEPLPTAD VAARFRRPYG FDQELPL // ID B1VJ47_PROMH Unreviewed; 924 AA. AC B1VJ47; DT 20-MAY-2008, integrated into UniProtKB/TrEMBL. DT 20-MAY-2008, sequence version 1. DT 14-MAY-2014, entry version 33. DE SubName: Full=Putative conjugal transfer protein; GN Name=pilX4; OrderedLocusNames=PMIP09; OS Proteus mirabilis (strain HI4320). OG Plasmid pHI4320. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Proteus. OX NCBI_TaxID=529507; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=HI4320; PLASMID=pHI4320; RX PubMed=18375554; DOI=10.1128/JB.01981-07; RA Pearson M.M., Sebaihia M., Churcher C., Quail M.A., Seshasayee A.S., RA Luscombe N.M., Abdellah Z., Arrosmith C., Atkin B., Chillingworth T., RA Hauser H., Jagels K., Moule S., Mungall K., Norbertczak H., RA Rabbinowitsch E., Walker D., Whithead S., Thomson N.R., Rather P.N., RA Parkhill J., Mobley H.L.T.; RT "Complete genome sequence of uropathogenic Proteus mirabilis, a master RT of both adherence and motility."; RL J. Bacteriol. 190:4027-4037(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM942760; CAQ34856.1; -; Genomic_DNA. DR RefSeq; YP_001812459.1; NC_010555.1. DR STRING; 529507.PMIP09; -. DR EnsemblBacteria; CAQ34856; CAQ34856; PMIP09. DR GeneID; 6166517; -. DR KEGG; pmr:PMIP09; -. DR PATRIC; 20522181; VBIProMir120933_3647. DR eggNOG; COG3451; -. DR HOGENOM; HOG000119263; -. DR KO; K03199; -. DR OMA; EMMELRS; -. DR OrthoDB; EOG6HMX9P; -. DR BioCyc; PMIR529507:GJIW-3817-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 924 AA; 105354 MW; 0261148B27971AB7 CRC64; MSVVFKGLTR PALIRGLGVP LYPFLFMIMV VVVIAANTSD YMYFLIPVGW FLIKKMTEID DRVFDLLYLR YRVSGHPVSN QKYDAVHYSG NTYDKVDISK LEKMMKLNHQ TPIEDMIPFS THITDKLVCT RKQDLIATWE IDGAYFECQA EDELDRLTDR LNTLIRSFED KAVTFYTHRI RTKSKIEKNF RSLVPFANRV MNDYYDSLSQ ECFYKNRLFI SLCYKPLTAD EKLTFLFSKN KKEKEKQNKK ILTESIAVMN DMTGRLDNYL EQFNATRLGV YEEKNRVFSS QLSLFQYLLT GKWQKIAITN SPFYNSLGGK DVFFGSDSGQ LSAGSDARYF RIIEIKDYFQ HTESGIFDAL MYVPVEYIMT SSFTILRKKE STKRLDDQLD KLVIANDAAV TQQNQLIVGT DMLASGLIAF GNASFSLLVY ADSPEELIKN SNMVANILQD LGLVVTYSGL SLGAAYFAQL PANYTLRPRL SMISSLNFVE MESFHNFFSG KEKNNSWGDA LITLKGSGND VYHMNYHMTR EGVNDFGKNP PLAHTEILGA SGGGKTVLMM AHALAAQQYG MADSFPDNRK IKKLTTVFFD KDRAGEVAIR AMGGEYFKIK SGEPTGWNPF QLAPTKRNIA FLKELVRILC TVNGGELDDH QLQLISDAVE RLMQRDNRTY GISKLIPLIM EDRDGTTLKT GLKVRLNAWA KDGEFGWVFD NENETFDINE KSVFGVDGTE FLDDKVTSQV IPFYLIYKVA SLADGRRLLI YMDEFHQWLV NESMQKSIYN ILKTGRKLDM VLVFATQSPD ELIKTPIAAA VREQCATHIY LSNPKATRED YVNGLQVSEL YFDIIKNIDP LSRMHLVVKN PQRKGDKTEF AAFAKLDLGQ AAKYLPILSA SSDQMVIFDE IYQEGMKPEE WIDVYLNQVN KISH // ID B1WN90_VIBF1 Unreviewed; 100 AA. AC B1WN90; DT 20-MAY-2008, integrated into UniProtKB/TrEMBL. DT 20-MAY-2008, sequence version 1. DT 16-APR-2014, entry version 20. DE SubName: Full=Type IV secretion (PTiA6 VirB3); GN OrderedLocusNames=VF_B0056; OS Vibrio fischeri (strain ATCC 700601 / ES114). OG Plasmid pES100. OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; OC Vibrionaceae; Aliivibrio. OX NCBI_TaxID=312309; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 700601 / ES114; RX PubMed=15703294; DOI=10.1073/pnas.0409900102; RA Ruby E.G., Urbanowski M., Campbell J., Dunn A., Faini M., Gunsalus R., RA Lostroh P., Lupp C., McCann J., Millikan D., Schaefer A., Stabb E., RA Stevens A., Visick K., Whistler C., Greenberg E.P.; RT "Complete genome sequence of Vibrio fischeri: a symbiotic bacterium RT with pathogenic congeners."; RL Proc. Natl. Acad. Sci. U.S.A. 102:3004-3009(2005). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000022; ACB55722.1; -; Genomic_DNA. DR RefSeq; YP_001816754.1; NC_006842.1. DR STRING; 312309.VF_B0056; -. DR EnsemblBacteria; ACB55722; ACB55722; VF_B0056. DR GeneID; 6175936; -. DR KEGG; vfi:VF_B0056; -. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; AFIS312309:GIWP-3970-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid; Reference proteome. SQ SEQUENCE 100 AA; 11599 MW; DD38ECC4C0A7F792 CRC64; MSEPIFKACT RPSMLFSVPL VPLMLSNAII FLVGMWANYF GLGLWLFILT IPNYLTLRFI TKLDDANLSL LGLRFKCRRM NRNRSFYGAT VYSPLPFKKR // ID B1Y1W3_LEPCP Unreviewed; 110 AA. AC B1Y1W3; DT 20-MAY-2008, integrated into UniProtKB/TrEMBL. DT 20-MAY-2008, sequence version 1. DT 13-NOV-2013, entry version 25. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Lcho_0871; OS Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix OS discophora (strain SP-6)). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Leptothrix. OX NCBI_TaxID=395495; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 51168 / LMG 8142 / SP-6; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., RA Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., RA Hauser L., Kyrpides N., Lykidis A., Emerson D., Richardson P.; RT "Complete sequence of Leptothrix cholodnii SP-6."; RL Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001013; ACB33143.1; -; Genomic_DNA. DR RefSeq; YP_001789908.1; NC_010524.1. DR STRING; 395495.Lcho_0871; -. DR EnsemblBacteria; ACB33143; ACB33143; Lcho_0871. DR GeneID; 6163591; -. DR KEGG; lch:Lcho_0871; -. DR PATRIC; 22392019; VBILepCho83238_0870. DR eggNOG; NOG295420; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; IVGTHIL; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; LCHO395495:GHYL-880-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 110 AA; 12348 MW; 3C652038C41A691D CRC64; MLAEAIYKGA TRPAMKLGIP LVPLVVLFGG GMLLIVWGGT LLSWWLSLAV LLALVPALLW MSWVTARDEQ RFRQMAIATK LKLHDRNHAF WCARSYSPTL YAGARDAWHV // ID B1Z655_BURA4 Unreviewed; 103 AA. AC B1Z655; DT 20-MAY-2008, integrated into UniProtKB/TrEMBL. DT 20-MAY-2008, sequence version 1. DT 14-MAY-2014, entry version 25. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=BamMC406_6507; OS Burkholderia ambifaria (strain MC40-6). OG Plasmid pBMC401. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia; Burkholderia cepacia complex. OX NCBI_TaxID=398577; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MC40-6; RA Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., RA Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Lykidis A., Ramette A., Konstantinidis K., Tiedje J., Richardson P.; RT "Complete sequence of plasmid 1 of Burkholderia ambifaria MC40-6."; RL Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001028; ACB68932.1; -; Genomic_DNA. DR RefSeq; YP_001812181.1; NC_010553.1. DR STRING; 398577.BamMC406_6507; -. DR EnsemblBacteria; ACB68932; ACB68932; BamMC406_6507. DR GeneID; 6181543; -. DR KEGG; bac:BamMC406_6507; -. DR PATRIC; 19040908; VBIBurAmb82852_5735. DR eggNOG; NOG278684; -. DR HOGENOM; HOG000263306; -. DR KO; K03198; -. DR OMA; FRRPYGF; -. DR OrthoDB; EOG6WHNT0; -. DR BioCyc; BAMB398577:GH38-6594-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 103 AA; 11792 MW; 8AC54FBD9AFD5203 CRC64; MRKPKKVSRS LSLPRQLGGA ERGLAIANGT ITTLLCYSAM TPAFLVVGIG IHWVLRWLSS TDPWWKEVLI VYNRYPDVHE PLPTTKFSVR FKRPYGFDQD LQC // ID B1ZGK9_METPB Unreviewed; 90 AA. AC B1ZGK9; DT 20-MAY-2008, integrated into UniProtKB/TrEMBL. DT 20-MAY-2008, sequence version 1. DT 14-MAY-2014, entry version 31. DE SubName: Full=Conjugal transfer protein TrbB; GN OrderedLocusNames=Mpop_3088; OS Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Methylobacteriaceae; Methylobacterium. OX NCBI_TaxID=441620; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-705 / NCIMB 13946 / BJ001; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., RA Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., RA Hauser L., Kyrpides N., Mikhailova N., Marx C., Richardson P.; RT "Complete sequence of chromosome of Methylobacterium populi BJ001."; RL Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001029; ACB81243.1; -; Genomic_DNA. DR RefSeq; YP_001925778.1; NC_010725.1. DR STRING; 441620.Mpop_3088; -. DR EnsemblBacteria; ACB81243; ACB81243; Mpop_3088. DR GeneID; 6310954; -. DR KEGG; mpo:Mpop_3088; -. DR PATRIC; 22563466; VBIMetPop124700_3140. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; ALTEHIM; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; MPOP441620:GHMI-3142-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 90 AA; 9521 MW; 2BAA1347FC417B29 CRC64; MADAADEVPG FTVPIHRALT EPILLGGAPR AIAIMNGTLA GAVGLGLRLW LVGLAIWAIG HFAAVWAAKR DPLFVDVGRR HLRIPAHLTV // ID B2CBD1_KLEPN Unreviewed; 912 AA. AC B2CBD1; DT 20-MAY-2008, integrated into UniProtKB/TrEMBL. DT 20-MAY-2008, sequence version 1. DT 14-MAY-2014, entry version 17. DE SubName: Full=VirB3-4; GN Name=virB3-4; OS Klebsiella pneumoniae. OG Plasmid pMET-1. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Klebsiella. OX NCBI_TaxID=573; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=FC1; PLASMID=pMET-1; RX PubMed=18350140; DOI=10.1371/journal.pone.0001800; RA Soler Bistue A.J., Birshan D., Tomaras A.P., Dandekar M., Tran T., RA Newmark J., Bui D., Gupta N., Hernandez K., Sarno R., Zorreguieta A., RA Actis L.A., Tolmasky M.E.; RT "Klebsiella pneumoniae multiresistance plasmid pMET1: similarity with RT the Yersinia pestis plasmid pCRY and integrative conjugative RT elements."; RL PLoS ONE 3:E1800-E1800(2008). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=FC1; PLASMID=pMET-1; RA Soler Bistue A.J.C., Birshan D., Tomaras A.P., Dandekar M., Tran T., RA Newmark J., Bui D., Gupta N., Hernandez K., Sarno R., Zorreguieta A., RA Actis L.A., Tolmasky M.E.; RL Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EU383016; ACB55449.1; -; Genomic_DNA. DR RefSeq; YP_001928051.1; NC_010726.1. DR ProteinModelPortal; B2CBD1; -. DR GeneID; 6325264; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 912 AA; 103057 MW; 9AAC1FDEA7940B59 CRC64; MAKLLKAMKR PAALWGVPMV PLLAVTGVTI IVAIWTSVAL LFLLPVQFLV MKSLTRNEPM RFNLIAVWLR AKGKPVANRL FGATTFMPVE HDDVDIKEFL DAMKLNQCAT IKKYIPYSSH IHQHVVRSPK SDLYCTWELM GTPFDCESDE SLQFGTNQLH GLIRSFEGMP VTFYIHNDRN TFTDNLHKDS GNPYADEVSR LYYASVGLFR RNRLFLTVCY RPFVSLEKAE RKRMKDSQKL KELDGALLEM LEIKSTLDTA LSRYGARPLG TFTEGSAVFS SQLAFYEYLL THQWRKVRVT RTPAYDVMGA AALFFSAESG QINHANGTQY FRGLEVKEFS EETATGMMDS LLYAPCDYVI TQSYTCMSRE EAKKAIKRTR RLLMSADDDA VSQRLDLDVA LDLLTSGKIA YGKHHFSIMV YSPSLESLVA DTNEISNALN NIGITPVPAE ISLSAAYMAQ LPGNYNLRPR KGELSSQNFV ELAALHNFYP GKRDKAPWGD AMALLRTPSG DGYYINLHNT LADKDEFNEK NPASTCILGT NGSGKTMLMT FFEIMQQKYG REDSFSPDAK TKRLTTVYLD KDRGAEMNIR ALGGRYYRVI SGESTGWNPF SLPATKRNIN FIKQLMKILC TRNGSTISPR DERRLSDAVN AVMNDEPQYR VYGITRMLEN LPEPATKEAQ ENGLSIRLSQ WAQGGEFGWV FDNESDTFDI SNCDNFGIDG TEFLDDASVC APISFYLLYR ITSLLDGRRL VIFMDEFWKW LRDPVFKDFA YNKLKTIRKL NGMLVVGTQS PAEIIKDDIA PAVIEQCGTQ ILAANPNADR AHYVDGMKFE PEVFDVVKGL DPQARQYVVV KNQFKRGDTK RFAARVTLDL SGIGRYTKVM SGDAPNLEIF ESIYREGMQP HEWLDTYLAK AL // ID B2CG16_CAMFE Unreviewed; 929 AA. AC B2CG16; DT 20-MAY-2008, integrated into UniProtKB/TrEMBL. DT 20-MAY-2008, sequence version 1. DT 16-APR-2014, entry version 14. DE SubName: Full=Fused VirB3/VirB4; GN Name=virB3/B4; OS Campylobacter fetus subsp. venerealis. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=32020; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 19438; RX PubMed=19897645; DOI=10.1128/JB.00803-09; RA Gorkiewicz G., Kienesberger S., Schober C., Scheicher S.R., Gully C., RA Zechner R., Zechner E.L.; RT "A genomic island defines subspecies-specific virulence features of RT the host-adapted pathogen Campylobacter fetus subsp. venerealis."; RL J. Bacteriol. 192:502-517(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EU443150; ACA64432.1; -; Genomic_DNA. DR ProteinModelPortal; B2CG16; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR018222; Nuclear_transport_factor_2_euk. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR PROSITE; PS50177; NTF2_DOMAIN; 1. PE 4: Predicted; SQ SEQUENCE 929 AA; 106777 MW; 971823A4D7D28C66 CRC64; MLVSEPIYKA LTRPPMVFGV PMVPFMMMAL GWALFAIFAK VLFGDVYLLL AVMIIPSIFV FQMIVKKDDM AFRLWGLKLR FFRSPSINKF YNGRKSYMAN STYSKQSLRN KYPKLSVVGL SEFANLENLI PYQTLIDNIV ITKEGDYLAS WRVDGIAFEV EDDELIDMNK NKLNMLVRQF AGENVSFYFH NARINTQVNQ KGYFSNEFLK NFAKKYYEIF SADNLKENRL YLTAIYSPLS RAEKMSFKNQ NIEAKKRQIR THLKSFNQKC NVIEQNLSHF KPYRLGVYDI EGVKFSSQLE LYNYLIGGKF TKVRVPNAPL DFYLNGNLNE IFPSQHTMQL NYNDGTRKFV KAIELKDYPN VSFSGIFDSL MYANVEYTIT QSFTPLSKKE ARDELTKQQK RLMAAEDDAI SQISELSSAL DELQSDIIFG EYHFSIVIYA DKQNECERIA NQIAVVLQDL GFLATQANIA LEATYFAQLP ANFMLRPRLH TISSKNYASF MALHNFPRGK QQGNPWGDAI AILQTPNGQP FFFNIHKTNF QKDEFGKNDV LANTFVLGQS GGGKTVLMNF TLNMLCKYNE LETFADSTPK DKRKATYFYL DKDKGALGNI MTIGGKYVMI TSGQPTGFNP FCCEATPENI RRLKVLMKML VTKGGQTHLM LTTRDEEQLN LAVDSVMRLE KSDRTHGVSR VWQLLQEGEN ETSSLKSRLM AWTIGNEFGW VFDNETDTLD FSDENILVYG IDGTDLLSDD EISPYVAYYI LWRIIDMVDG RRFGLFIDEA WDWLKNPVVS KEVFNKEKTI RKENGFLFLG TQSVEDIAKS DIGTAIMEQS ETILLLSNPK AKEDDYCRAL NMSEAEYQFV KTTIPEKYEF LIKKGVDYRA IAKINLSHLG NMVRVLSTSK DYVDELTKIN AMNIGYDEKY QLVKELYRF // ID B2FJH1_STRMK Unreviewed; 102 AA. AC B2FJH1; DT 10-JUN-2008, integrated into UniProtKB/TrEMBL. DT 10-JUN-2008, sequence version 1. DT 14-MAY-2014, entry version 28. DE SubName: Full=Putative type IV secretion system transmembrane protein; GN OrderedLocusNames=Smlt3000; OS Stenotrophomonas maltophilia (strain K279a). OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Stenotrophomonas; OC Stenotrophomonas maltophilia group. OX NCBI_TaxID=522373; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=K279a; RX PubMed=18419807; DOI=10.1186/gb-2008-9-4-r74; RA Crossman L.C., Gould V.C., Dow J.M., Vernikos G.S., Okazaki A., RA Sebaihia M., Saunders D., Arrowsmith C., Carver T., Peters N., RA Adlem E., Kerhornou A., Lord A., Murphy L., Seeger K., Squares R., RA Rutter S., Quail M.A., Rajandream M.A., Harris D., Churcher C., RA Bentley S.D., Parkhill J., Thomson N.R., Avison M.B.; RT "The complete genome, comparative and functional analysis of RT Stenotrophomonas maltophilia reveals an organism heavily shielded by RT drug resistance determinants."; RL Genome Biol. 9:R74.1-R74.13(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM743169; CAQ46450.1; -; Genomic_DNA. DR RefSeq; YP_001972744.1; NC_010943.1. DR STRING; 522373.Smlt3000; -. DR EnsemblBacteria; CAQ46450; CAQ46450; Smlt3000. DR GeneID; 6395320; -. DR KEGG; sml:Smlt3000; -. DR PATRIC; 23701529; VBISteMal45202_2827. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; MAKRDEM; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; SMAL522373:GJE8-2902-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 102 AA; 12137 MW; 2B655A038E1436F9 CRC64; MHKNVLFRGC TRPAMFLGVP YLPFFMVAGG LLLLSMYTNF WFLLTIPVAI FIMRQMAKRD EMIFRLLGLR LMFKLKVRNV QEHDGMWVFN PNHYRNKPAP RD // ID B2FTE1_STRMK Unreviewed; 90 AA. AC B2FTE1; DT 10-JUN-2008, integrated into UniProtKB/TrEMBL. DT 10-JUN-2008, sequence version 1. DT 14-MAY-2014, entry version 28. DE SubName: Full=Putative conjugal transfer protein; GN Name=trbD; OrderedLocusNames=Smlt1289; OS Stenotrophomonas maltophilia (strain K279a). OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Stenotrophomonas; OC Stenotrophomonas maltophilia group. OX NCBI_TaxID=522373; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=K279a; RX PubMed=18419807; DOI=10.1186/gb-2008-9-4-r74; RA Crossman L.C., Gould V.C., Dow J.M., Vernikos G.S., Okazaki A., RA Sebaihia M., Saunders D., Arrowsmith C., Carver T., Peters N., RA Adlem E., Kerhornou A., Lord A., Murphy L., Seeger K., Squares R., RA Rutter S., Quail M.A., Rajandream M.A., Harris D., Churcher C., RA Bentley S.D., Parkhill J., Thomson N.R., Avison M.B.; RT "The complete genome, comparative and functional analysis of RT Stenotrophomonas maltophilia reveals an organism heavily shielded by RT drug resistance determinants."; RL Genome Biol. 9:R74.1-R74.13(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM743169; CAQ44838.1; -; Genomic_DNA. DR RefSeq; YP_001971151.1; NC_010943.1. DR STRING; 522373.Smlt1289; -. DR EnsemblBacteria; CAQ44838; CAQ44838; Smlt1289. DR GeneID; 6391996; -. DR KEGG; sml:Smlt1289; -. DR PATRIC; 23698319; VBISteMal45202_1249. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; PGLVLWI; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; SMAL522373:GJE8-1257-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 90 AA; 9723 MW; 83EE633C96DB2EAE CRC64; MNGLHDGLPG FEVPLHRSLT EPILMGGAPR TVAITNGTLA TAVGLGLQMW IPGVVLWVVG HALAVWGARV DPQFMQVFAR HIKHRPLLDV // ID B2IAS1_XYLF2 Unreviewed; 106 AA. AC B2IAS1; DT 10-JUN-2008, integrated into UniProtKB/TrEMBL. DT 10-JUN-2008, sequence version 1. DT 14-MAY-2014, entry version 27. DE SubName: Full=Conjugal transfer TrbD family protein; DE Flags: Precursor; GN OrderedLocusNames=XfasM23_2227; OS Xylella fastidiosa (strain M23). OG Plasmid pXFAS01. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xylella. OX NCBI_TaxID=405441; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=M23; PLASMID=pXFAS01; RX PubMed=20601474; DOI=10.1128/JB.00651-10; RA Chen J., Xie G., Han S., Chertkov O., Sims D., Civerolo E.L.; RT "Whole genome sequences of two Xylella fastidiosa strains (M12 and RT M23) causing almond leaf scorch disease in California."; RL J. Bacteriol. 192:4534-4534(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001012; ACB93620.1; -; Genomic_DNA. DR RefSeq; YP_001830933.1; NC_010579.1. DR STRING; 405441.XfasM23_2227; -. DR EnsemblBacteria; ACB93620; ACB93620; XfasM23_2227. DR GeneID; 6204153; -. DR KEGG; xfn:XfasM23_2227; -. DR PATRIC; 24147242; VBIXylFas85937_2770. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; LRMMAKS; -. DR OrthoDB; EOG6N6849; -. DR BioCyc; XFAS405441:GJJI-2281-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 106 AA; 12452 MW; 4C88C8BCBEB50125 CRC64; MALRTIPIRR AGNRDNLFMG GDREMVMFSG LLCAVLIFVA QDWIAAGFGL GMWFIALWLL RKIAKADPRM RFVYMRNRRY KAYYPPRATP FRNNTVFQGS QYKCFK // ID B2SCN4_BRUA1 Unreviewed; 116 AA. AC B2SCN4; DT 01-JUL-2008, integrated into UniProtKB/TrEMBL. DT 01-JUL-2008, sequence version 1. DT 14-MAY-2014, entry version 27. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN OrderedLocusNames=BAbS19_II00610; OS Brucella abortus (strain S19). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=430066; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=S19; RX PubMed=18478107; DOI=10.1371/journal.pone.0002193; RA Crasta O.R., Folkerts O., Fei Z., Mane S.P., Evans C., RA Martino-Catt S., Bricker B., Yu G., Du L., Sobral B.W.; RT "Genome sequence of Brucella abortus vaccine strain S19 compared to RT virulent strains yields candidate virulence genes."; RL PLoS ONE 3:E2193-E2193(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000888; ACD73588.1; -; Genomic_DNA. DR RefSeq; YP_001932034.1; NC_010740.1. DR ProteinModelPortal; B2SCN4; -. DR STRING; 430066.BAbS19_II00610; -. DR EnsemblBacteria; ACD73588; ACD73588; BAbS19_II00610. DR GeneID; 6326682; -. DR KEGG; bmc:BAbS19_II00610; -. DR PATRIC; 17814510; VBIBruAbo38055_0067. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; FWGASSY; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BABO430066:GHI6-2118-MONOMER; -. DR PRO; PR:B2SCN4; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID B2T040_BURPP Unreviewed; 110 AA. AC B2T040; DT 01-JUL-2008, integrated into UniProtKB/TrEMBL. DT 01-JUL-2008, sequence version 1. DT 14-MAY-2014, entry version 26. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Bphyt_0162; OS Burkholderia phytofirmans (strain DSM 17436 / PsJN). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia. OX NCBI_TaxID=398527; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 17436 / PsJN; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., RA Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Mikhailova N., Nowak J., Sessitsch A., Lazarovits G., Compant S., RA Barka E., Tiedje J.; RT "Complete sequence of chromosome 1 of Burkholderia phytofirmans RT PsJN."; RL Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001052; ACD14601.1; -; Genomic_DNA. DR RefSeq; YP_001893825.1; NC_010681.1. DR STRING; 398527.Bphyt_0162; -. DR EnsemblBacteria; ACD14601; ACD14601; Bphyt_0162. DR GeneID; 6281706; -. DR KEGG; bpy:Bphyt_0162; -. DR PATRIC; 19210135; VBIBurPhy117947_3862. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; FWGASSY; -. DR OrthoDB; EOG6VMTNS; -. DR BioCyc; BPHY398527:GJEX-162-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 110 AA; 12249 MW; F852A44C9B75A3F7 CRC64; MNPAANRLVD PVFKGCTRPA MLWGVPLVPF LMVGGSILIP AIWALLASPP AGVGIVLLLI PVFVTMRAVT RHDDQRLAQL ALRLRMVVRQ RNRGFWCAHA YTPLRLKRRG // ID B2T8Z6_BURPP Unreviewed; 114 AA. AC B2T8Z6; DT 01-JUL-2008, integrated into UniProtKB/TrEMBL. DT 01-JUL-2008, sequence version 1. DT 14-MAY-2014, entry version 24. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Bphyt_6505; OS Burkholderia phytofirmans (strain DSM 17436 / PsJN). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia. OX NCBI_TaxID=398527; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 17436 / PsJN; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., RA Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Mikhailova N., Nowak J., Sessitsch A., Lazarovits G., Compant S., RA Barka E., Tiedje J.; RT "Complete sequence of chromosome 2 of Burkholderia phytofirmans RT PsJN."; RL Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001053; ACD20811.1; -; Genomic_DNA. DR RefSeq; YP_001890182.1; NC_010676.1. DR STRING; 398527.Bphyt_6505; -. DR EnsemblBacteria; ACD20811; ACD20811; Bphyt_6505. DR GeneID; 6278141; -. DR KEGG; bpy:Bphyt_6505; -. DR PATRIC; 19207906; VBIBurPhy117947_2755. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; MAKRDEM; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BPHY398527:GJEX-6575-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 114 AA; 12969 MW; CEE14862B1DB0EF3 CRC64; MNPIMNSPIS PLRDPVFKGC TRPAMLWGVP LVPFLMVGGG MLIPAIWALL ASPPLGVGLL FLMIPVFVAM RVITRRDDQR LAQYALRLRM VLRQGNRRFW GMHAYTPVRL KRRT // ID B2TH82_BURPP Unreviewed; 111 AA. AC B2TH82; DT 01-JUL-2008, integrated into UniProtKB/TrEMBL. DT 01-JUL-2008, sequence version 1. DT 01-MAY-2013, entry version 15. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=Bphyt_7346; OS Burkholderia phytofirmans (strain DSM 17436 / PsJN). OG Plasmid pBPHYT01. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia. OX NCBI_TaxID=398527; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 17436 / PsJN; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., RA Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Mikhailova N., Nowak J., Sessitsch A., Lazarovits G., Compant S., RA Barka E., Tiedje J.; RT "Complete sequence of plasmid 1 of Burkholderia phytofirmans PsJN."; RL Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001054; ACD21631.1; -; Genomic_DNA. DR RefSeq; YP_001893560.1; NC_010679.1. DR STRING; 398527.Bphyt_7346; -. DR EnsemblBacteria; ACD21631; ACD21631; Bphyt_7346. DR GeneID; 6280681; -. DR KEGG; bpy:Bphyt_7346; -. DR PATRIC; 19209696; VBIBurPhy117947_3642. DR BioCyc; BPHY398527:GJEX-7423-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 111 AA; 12893 MW; 43A7BF5F3AC48CEC CRC64; MEKDELTSSV VIRAGQRPAL MLYVPLSLFI MEAMVGLVLF RLIGYWVAML IPIHFYFVTR TAEDYHWMTT VKADIYHYFF FVKNKGLHGK GVITFTASPP NARQRNYDGL R // ID B2TSH9_SHIB3 Unreviewed; 915 AA. AC B2TSH9; DT 01-JUL-2008, integrated into UniProtKB/TrEMBL. DT 01-JUL-2008, sequence version 1. DT 14-MAY-2014, entry version 33. DE SubName: Full=TriC protein; GN OrderedLocusNames=SbBS512_0037; OS Shigella boydii serotype 18 (strain CDC 3083-94 / BS512). OG Plasmid pBS512_33. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Shigella. OX NCBI_TaxID=344609; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CDC 3083-94 / BS512; RA Rasko D.A., Rosovitz M., Maurelli A.T., Myers G., Seshadri R., Cer R., RA Jiang L., Ravel J., Sebastian Y.; RT "Complete sequence of Shigella boydii serotype 18 strain BS512."; RL Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001059; ACD05992.1; -; Genomic_DNA. DR RefSeq; YP_001878805.1; NC_010657.1. DR STRING; 344609.SbBS512_0037; -. DR EnsemblBacteria; ACD05992; ACD05992; SbBS512_0037. DR GeneID; 6268366; -. DR KEGG; sbc:SbBS512_0037; -. DR PATRIC; 18666395; VBIShiBoy129590_0030. DR eggNOG; COG3451; -. DR HOGENOM; HOG000119263; -. DR KO; K03199; -. DR OMA; WRECARW; -. DR OrthoDB; EOG6HMX9P; -. DR BioCyc; SBOY344609:GI0O-5287-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 915 AA; 103920 MW; 2452315F26A946C4 CRC64; MSTLYKAMTR PAMYVGVPVV PLTVVAGALF LAGVYISKLI WLAIPVAVFI LRMITKQDDH IFNLYFLKLK MLGNSVCNRF FGARAFLSGQ YEAVEIDEFV NAMKLNERIT TGKYIPYSSH VDKNIVKTKN GDYVATWQLM GINFESISAE MLETIDSQVA TLVRSFSGLP VSFYNHSCRA SFYDAFTTKS GNKYADIISD CYYGSMKKNK FKGNTLYFTL IYRPDGRVEK LEKRKKSIKE KKDDIHIHVK RMNEMINTFS GALDKFTCKL LGMYEENGKV FSSQLSFYNY LLTGKLQKIR VTDSPVYNVL GGVDVFFNHD TGQICRIDGN KFFRSIEIKD FCSETASGVF DVLQYSDADY IITHSYTSMS KSEALSTIKR AEKQLKSTED DAVTQLQELE KAKNDIVSGD ISFGYYHFTI MVMADSIREL DESVSKITAD FTDLGIIPAL STMSLPAAYF AQLPAVFHLR PRLSPVSNVN FVELASFHNF YQGKRDKNCW TEAVAILKTP SKQAYYLNLH NSVLFKDETG EKNLANTKVI GTAGSGKTMF LSYLACSLQK YNNPETFADS AKNKKLTCVF LDKDRGAELC IRMLGGEYYT VKSGEPTGWN PFALEATKRN RIFVKQLMEI LCTRNGERLS TRERLLISES VDAVMDFPPG EMREYGITRM LEHLMQRDDR DEQENGIILR LSQWANSQAH GWVFDNAKDT FNIQHVNNFG IDGTEFLDDP MVCAPITFYL LYRITQLLDG RRLVIFLDEF WKWLQDEAFS DFVYNKLKTI RKLNGLVIPA TQSPDEILKN KISRAVVEVC STSIYLANPD ADYNDYVEGL KLTPEEFNII KNLDPMSRQF LIKKSSLKKG DGKSFSALAT LDLSGLGGYL KILSASADNL EIFESIYHEG MEPDDWVPEY LERAI // ID B2UAH6_RALPJ Unreviewed; 94 AA. AC B2UAH6; DT 01-JUL-2008, integrated into UniProtKB/TrEMBL. DT 01-JUL-2008, sequence version 1. DT 14-MAY-2014, entry version 29. DE SubName: Full=Putative conjugal transfer TrbD transmembrane protein; GN OrderedLocusNames=Rpic_2647; OS Ralstonia pickettii (strain 12J). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Ralstonia. OX NCBI_TaxID=402626; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=12J; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Bruce D., Goodwin L., Pitluck S., Meincke L., Brettin T., RA Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., RA Hauser L., Kyrpides N., Mikhailova N., Marsh T., Richardson P.; RT "Complete sequence of chromosome 1 of Ralstonia pickettii 12J."; RL Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001068; ACD27773.1; -; Genomic_DNA. DR RefSeq; YP_001900205.1; NC_010682.1. DR STRING; 402626.Rpic_2647; -. DR EnsemblBacteria; ACD27773; ACD27773; Rpic_2647. DR GeneID; 6287949; -. DR KEGG; rpi:Rpic_2647; -. DR PATRIC; 20256096; VBIRalPic63053_3782. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; PGLVLWI; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; RPIC402626:GH94-2684-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 94 AA; 9990 MW; 26283BB2FBAFA8E7 CRC64; MSAAHDGVQG FAPGFEVPLH RSLTEPILLG GAPRTVAIAN GTLAAAVGLG LQLWIPGLVL WIAGHALAVW GARVDPRFMQ VFARHIKHRP LLDV // ID B2UKJ4_RALPJ Unreviewed; 118 AA. AC B2UKJ4; DT 01-JUL-2008, integrated into UniProtKB/TrEMBL. DT 01-JUL-2008, sequence version 1. DT 14-MAY-2014, entry version 20. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Rpic_5014; OS Ralstonia pickettii (strain 12J). OG Plasmid pRPIC01. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Ralstonia. OX NCBI_TaxID=402626; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=12J; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Bruce D., Goodwin L., Pitluck S., Meincke L., Brettin T., RA Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., RA Hauser L., Kyrpides N., Mikhailova N., Marsh T., Richardson P.; RT "Complete sequence of plasmid 1 of Ralstonia pickettii 12J."; RL Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001070; ACD30095.1; -; Genomic_DNA. DR RefSeq; YP_001901374.1; NC_010683.1. DR STRING; 402626.Rpic_5014; -. DR EnsemblBacteria; ACD30095; ACD30095; Rpic_5014. DR GeneID; 6289950; -. DR KEGG; rpi:Rpic_5014; -. DR PATRIC; 20258490; VBIRalPic63053_4958. DR HOGENOM; HOG000001532; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; RPIC402626:GH94-5077-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 118 AA; 13220 MW; 86CC05FD3A06FF0B CRC64; MTTAIEAGTP AADTPADSLS VPIRKTMLEK FLMGGIDRKL CAGELAILIF TAVGLRNPWV LLALPPTHLI LWLATKRDPD QFNCYLRYSK QGDFYEPRPM LRQTRNARPK GFARGELC // ID B2VB02_ERWT9 Unreviewed; 104 AA. AC B2VB02; DT 01-JUL-2008, integrated into UniProtKB/TrEMBL. DT 01-JUL-2008, sequence version 1. DT 14-MAY-2014, entry version 25. DE SubName: Full=TraD protein; GN Name=traD; OrderedLocusNames=ETA_pET490080; OS Erwinia tasmaniensis (strain DSM 17950 / Et1/99). OG Plasmid pET49. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Erwinia. OX NCBI_TaxID=338565; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 17950 / Et1/99; PLASMID=pET49; RX PubMed=18462403; DOI=10.1111/j.1462-2920.2008.01639.x; RA Kube M., Migdoll A.M., Mueller I., Kuhl H., Beck A., Reinhardt R., RA Geider K.; RT "The genome of Erwinia tasmaniensis strain Et1/99, a non-pathogenic RT bacterium in the genus Erwinia."; RL Environ. Microbiol. 10:2211-2222(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CU468131; CAO94850.1; -; Genomic_DNA. DR RefSeq; YP_001909446.1; NC_010697.1. DR STRING; 465817.ETA_pET490080; -. DR EnsemblBacteria; CAO94850; CAO94850; ETA_pET490080. DR GeneID; 6325641; -. DR KEGG; eta:ETA_pET490080; -. DR HOGENOM; HOG000063015; -. DR KO; K03198; -. DR OMA; ICENDPN; -. DR OrthoDB; EOG67X20P; -. DR BioCyc; ETAS465817:GI36-3600-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 104 AA; 11375 MW; 6A2C27FFFAEBE004 CRC64; MNGKDVYFTY NGLNRPAMVR GVPLMILLSC GFLATFSGFI GVFFLGVFGI IFPLIIGAFI FTVKVICEND PNALRVVKLS LSGMMLKLKH GDRITGFDSG GYDQ // ID B3CLE4_WOLPP Unreviewed; 98 AA. AC B3CLE4; DT 22-JUL-2008, integrated into UniProtKB/TrEMBL. DT 22-JUL-2008, sequence version 1. DT 14-MAY-2014, entry version 31. DE SubName: Full=Type IV secretion system protein VirB3, putative; GN OrderedLocusNames=WP0604; OS Wolbachia pipientis subsp. Culex pipiens (strain wPip). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=570417; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=wPip; RX PubMed=18550617; DOI=10.1093/molbev/msn133; RA Klasson L., Walker T., Sebaihia M., Sanders M.J., Quail M.A., Lord A., RA Sanders S., Earl J., O'Neill S.L., Thomson N., Sinkins S.P., RA Parkhill J.; RT "Genome evolution of Wolbachia strain wPip from the Culex pipiens RT group."; RL Mol. Biol. Evol. 25:1877-1887(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM999887; CAQ54712.1; -; Genomic_DNA. DR RefSeq; YP_001975370.1; NC_010981.1. DR STRING; 570417.WPa_0604; -. DR EnsemblBacteria; CAQ54712; CAQ54712; WP0604. DR GeneID; 6384633; -. DR KEGG; wpi:WPa_0604; -. DR PATRIC; 24026836; VBIWolEnd95846_0665. DR eggNOG; COG3702; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; WEND570417:GHSW-612-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 98 AA; 10967 MW; 78387A0B42E26374 CRC64; MSTGSIQTNQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INTNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIT // ID B3CRS8_ORITI Unreviewed; 95 AA. AC B3CRS8; DT 22-JUL-2008, integrated into UniProtKB/TrEMBL. DT 22-JUL-2008, sequence version 1. DT 14-MAY-2014, entry version 23. DE SubName: Full=Type IV secretion system protein VirB3; GN Name=virB3; OrderedLocusNames=OTT_0769; OS Orientia tsutsugamushi (strain Ikeda) (Rickettsia tsutsugamushi). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Orientia. OX NCBI_TaxID=334380; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Ikeda; RX PubMed=18508905; DOI=10.1093/dnares/dsn011; RA Nakayama K., Yamashita A., Kurokawa K., Morimoto T., Ogawa M., RA Fukuhara M., Urakami H., Ohnishi M., Uchiyama I., Ogura Y., Ooka T., RA Oshima K., Tamura A., Hattori M., Hayashi T.; RT "The whole-genome sequencing of the obligate intracellular bacterium RT Orientia tsutsugamushi revealed massive gene amplification during RT reductive genome evolution."; RL DNA Res. 15:185-199(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP008981; BAG40227.1; -; Genomic_DNA. DR RefSeq; YP_001937461.1; NC_010793.1. DR STRING; 334380.OTT_0769; -. DR EnsemblBacteria; BAG40227; BAG40227; OTT_0769. DR GeneID; 6337982; -. DR KEGG; ott:OTT_0769; -. DR PATRIC; 22827682; VBIOriTsu129072_0871. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; OTSU334380:GC7O-778-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10782 MW; BF2E4AA904F5DBD5 CRC64; MLGKLEADPL FLGLTRPPMI FGVSLSYALL NIMLSTMYLT VASNFYVVPV SLVVHGVGYL LCFKEPRFME IYLMRAQKFN KCPNRLYYGA NSYGI // ID B3G1W8_PSEAI Unreviewed; 89 AA. AC B3G1W8; DT 22-JUL-2008, integrated into UniProtKB/TrEMBL. DT 22-JUL-2008, sequence version 1. DT 16-NOV-2011, entry version 5. DE SubName: Full=Type IV secretory pathway protein; GN Name=trbD; ORFNames=PACL_0242; OS Pseudomonas aeruginosa. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. OX NCBI_TaxID=287; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=PACS171b; RX PubMed=18445516; DOI=10.1016/j.ygeno.2008.02.005; RA Hayden H.S., Gillett W., Saenphimmachak C., Lim R., Zhou Y., RA Jacobs M.A., Chang J., Rohmer L., D'Argenio D.A., Palmieri A., RA Levy R., Haugen E., Wong G.K., Brittnacher M.J., Burns J.L., RA Miller S.I., Olson M.V., Kaul R.; RT "Large-insert genome analysis technology detects structural variation RT in Pseudomonas aeruginosa clinical strains from cystic fibrosis RT patients."; RL Genomics 91:530-537(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EU595746; ACD39030.1; -; Genomic_DNA. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 89 AA; 9501 MW; A709424889CEDFCE CRC64; MSTATDLPGF EVPLHRSLTE PILLGGAPRT VAIANGTLAA AVGLGLQLWI PGVVMWIVGH SLAVWGARVD PQFMQVFARH IKHKPLLDA // ID B3Q2G7_RHIE6 Unreviewed; 112 AA. AC B3Q2G7; DT 02-SEP-2008, integrated into UniProtKB/TrEMBL. DT 02-SEP-2008, sequence version 1. DT 14-MAY-2014, entry version 25. DE SubName: Full=Transport secretion system IV protein, VirB3; GN Name=virB3b; OrderedLocusNames=RHECIAT_PB0000160; OS Rhizobium etli (strain CIAT 652). OG Plasmid pB. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium. OX NCBI_TaxID=491916; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CIAT 652; PLASMID=pB; RA Gonzalez V., Acosta J.L., Santamaria R.I., Bustos P., RA Hernandez-Gonzalez I.L., Fernandez J.L., Diaz R., Flores M., Mora J., RA Palacios R., Davila G.; RT "Genome diversity and DNA divergence of Rhizobium etli."; RL Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001076; ACE93873.1; -; Genomic_DNA. DR RefSeq; YP_001984423.1; NC_010996.1. DR STRING; 491916.RHECIAT_PB0000160; -. DR EnsemblBacteria; ACE93873; ACE93873; RHECIAT_PB0000160. DR GeneID; 6402664; -. DR KEGG; rec:RHECIAT_PB0000160; -. DR PATRIC; 23102645; VBIRhiEtl120572_4533. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; HDHNMFR; -. DR OrthoDB; EOG6VMTNS; -. DR BioCyc; RETL491916:GH4T-5565-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 112 AA; 12502 MW; A42F66341BC64E32 CRC64; MASIPILEDD TLFLACTRPA MIAGVTMEAM GVNIMLTTIL YITAGSIAYA LVGIVFHVLF RALVKHDHNM FRILIAWIET RGRSRNAAYW GGATLSPLAL IRRYDERDLS FV // ID B3Q3W9_RHIE6 Unreviewed; 112 AA. AC B3Q3W9; DT 02-SEP-2008, integrated into UniProtKB/TrEMBL. DT 02-SEP-2008, sequence version 1. DT 14-MAY-2014, entry version 27. DE SubName: Full=Transport secretion system IV protein, VirB3; GN Name=virB3c; OrderedLocusNames=RHECIAT_PC0000909; OS Rhizobium etli (strain CIAT 652). OG Plasmid pC. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium. OX NCBI_TaxID=491916; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CIAT 652; PLASMID=pC; RA Gonzalez V., Acosta J.L., Santamaria R.I., Bustos P., RA Hernandez-Gonzalez I.L., Fernandez J.L., Diaz R., Flores M., Mora J., RA Palacios R., Davila G.; RT "Genome diversity and DNA divergence of Rhizobium etli."; RL Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001077; ACE94979.1; -; Genomic_DNA. DR RefSeq; YP_001985529.1; NC_010997.1. DR STRING; 491916.RHECIAT_PC0000909; -. DR EnsemblBacteria; ACE94979; ACE94979; RHECIAT_PC0000909. DR GeneID; 6403796; -. DR KEGG; rec:RHECIAT_PC0000909; -. DR PATRIC; 23104872; VBIRhiEtl120572_5646. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; TIGIAMH; -. DR OrthoDB; EOG6VMTNS; -. DR BioCyc; RETL491916:GH4T-5327-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 112 AA; 12534 MW; AF4469A17A1FAE09 CRC64; MVSIQSLEDD TLFLACTRPA MIAGVTMEAM GVNIMLTTIL YITAGSIAYA LVGIVFHVLF RALVKHDHNR FRILIAWIET RGRSRNSAYW GGSTLSPLTL TRRYDERDLS LG // ID B3X753_SHIDY Unreviewed; 903 AA. AC B3X753; DT 23-SEP-2008, integrated into UniProtKB/TrEMBL. DT 23-SEP-2008, sequence version 1. DT 16-APR-2014, entry version 9. DE SubName: Full=TriC protein; GN ORFNames=Sd1012_3439; OS Shigella dysenteriae 1012. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Shigella. OX NCBI_TaxID=358708; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=1012; RA Rasko D.A., Rosovitz M.J., Brinkley C., Myers G.S.A., Sheshadri R., RA Cer R.Z., Jiang L., Ravel J.; RL Submitted (DEC-2005) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=1012; RA Rasko D., Rosovitz M., Myers G., Seshadri R., Cer R., Jiang L., RA Ravel J., Fricke W.F., Sebastian Y.; RL Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAMJ02000071; EDX32661.1; -; Genomic_DNA. DR EnsemblBacteria; EDX32661; EDX32661; Sd1012_3439. DR PATRIC; 28583387; VBIShiDys19375_5244. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 903 AA; 102571 MW; A322EF347AC7A2BF CRC64; MYVGVPVVPL TVVAGALFLA GVYISKLIWL AIPVAVFILR MITKQDDHIF NLYFLKLKML GNSVCNRFFG ARAFLSGQYE AVEIDEFINA MKLNERITTG KYIPYSSHVD KNIVKTKNGD YVATWQLMGI NFESISAEML ETIDSQVATL VRSFSGLPVS FYNHSCRASF YDAFTTKSGN KYADIISDCY YGSMKKNKFK GNTLYFTLIY RPDGRVEKLE KRKKSIKEKK DDINIHVKRM NEMINTFSGA LDKFTCKLLG MYEENGKVFS SQLSFYNYLL TGKLQKIRVT DSPVYNVLGG VDVFFNHDTG QICRIDGNKF FRSIEIKDFC SETASGVFDV LQYSDADYII THSYTSMSKS EALSTIKRAE KQLKSTEDDA VTQLQELEKA KNDIVSGDIS FGYYHFTLMV MADSIRELDE SVSKITADFT DLGIIPALST MSLPAAYFAQ LPAVFHLRPR LSPVSNVNFV ELASFHNFYQ GKRDKNCWTE AVAILKTPSK QAYYLNLHNS VLFKDERGEK NLANTKVIGT AGSGKTMFLS YLACSLQKYN NPETFADSAK NKKLTCVFLD KDRGAELCIR MLGGEYYTVK SGEPTGWNPF ALEATKRNRI FVKQLMEILC TRNGERLSTR ERLLISESVD AVMDFPPGEM REYGITRMLE HLMQRDDRDE QENGIILRLS QWANGQAHGW VFDNAKDTFN IQHVNNFGID GTEFLDDPMV CAPITFYLLY RITQLLDGRR LVIFLDEFWK WLQDEAFSDF VYNKLKTIRK LNGLVIPATQ SPDEILKNKI SRAVVEVCST SIYLANPDAD YNDYVEGLKL TPEEFNIVKN LDPMSRQFLI KKSSLKKGDG KSFSALATLD LSGLGGYLKI LSASADNLEI FESIYHEGME PDDWVPEYLE RAI // ID B4EIR7_BURCJ Unreviewed; 112 AA. AC B4EIR7; DT 23-SEP-2008, integrated into UniProtKB/TrEMBL. DT 23-SEP-2008, sequence version 1. DT 14-MAY-2014, entry version 23. DE SubName: Full=Putative type IV secretion system protein VirB3; GN ORFNames=BCAM0326; OS Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 OS / NCTC 13227 / J2315 / CF5610) (Burkholderia cepacia (strain J2315)). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia; Burkholderia cepacia complex. OX NCBI_TaxID=216591; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / RC CF5610; RX PubMed=18931103; DOI=10.1128/JB.01230-08; RA Holden M.T., Seth-Smith H.M., Crossman L.C., Sebaihia M., RA Bentley S.D., Cerdeno-Tarraga A.M., Thomson N.R., Bason N., RA Quail M.A., Sharp S., Cherevach I., Churcher C., Goodhead I., RA Hauser H., Holroyd N., Mungall K., Scott P., Walker D., White B., RA Rose H., Iversen P., Mil-Homens D., Rocha E.P., Fialho A.M., RA Baldwin A., Dowson C., Barrell B.G., Govan J.R., Vandamme P., RA Hart C.A., Mahenthiralingam E., Parkhill J.; RT "The genome of Burkholderia cenocepacia J2315, an epidemic pathogen of RT cystic fibrosis patients."; RL J. Bacteriol. 191:261-277(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM747721; CAR54185.1; -; Genomic_DNA. DR RefSeq; YP_002232955.1; NC_011001.1. DR STRING; 216591.BCAM0326; -. DR GeneID; 6928115; -. DR KEGG; bcj:BCAM0326; -. DR PATRIC; 19079780; VBIBurCen118154_4009. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; FWGASSY; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BCEN216591:GJI4-3948-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 112 AA; 12525 MW; EBA81BFD5122381B CRC64; MNTELIVDTL SDPVFKGCTR PAMLWGVPLV PLLTVGGGML IPAIWVLMAS AALGVAIALL IVPVFATMRM ITRQDDQRLA QRMLRAKMRL HQRNRRFWGA HAYAPIRFKA RG // ID B4RAB8_PHEZH Unreviewed; 89 AA. AC B4RAB8; DT 23-SEP-2008, integrated into UniProtKB/TrEMBL. DT 23-SEP-2008, sequence version 1. DT 14-MAY-2014, entry version 26. DE SubName: Full=Conjugal transfer protein; GN Name=trbD; OrderedLocusNames=PHZ_c1514; OS Phenylobacterium zucineum (strain HLK1). OC Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; OC Caulobacteraceae; Phenylobacterium. OX NCBI_TaxID=450851; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=HLK1; RX PubMed=18700039; DOI=10.1186/1471-2164-9-386; RA Luo Y., Xu X., Ding Z., Liu Z., Zhang B., Yan Z., Sun J., Hu S., RA Hu X.; RT "Complete genome of Phenylobacterium zucineum - a novel facultative RT intracellular bacterium isolated from human erythroleukemia cell line RT K562."; RL BMC Genomics 9:386-386(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000747; ACG77925.1; -; Genomic_DNA. DR RefSeq; YP_002130354.1; NC_011144.1. DR STRING; 450851.PHZ_c1514; -. DR EnsemblBacteria; ACG77925; ACG77925; PHZ_c1514. DR GeneID; 6791021; -. DR KEGG; pzu:PHZ_c1514; -. DR PATRIC; 22925912; VBIPheZuc44517_2034. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; WAIGHIA; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; PZUC450851:GHUG-1535-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 89 AA; 9620 MW; 34FDCD6A4C0AB1FC CRC64; MQQTPTPPGF EAPVHRALTE PVLLAGAPRA FAIVNGTLAA AIGLGLRLWI AGLALWLIGH AFAVWAAKRD PHFVEVVRRH VRIPPYLGI // ID B4RFU6_PHEZH Unreviewed; 112 AA. AC B4RFU6; DT 23-SEP-2008, integrated into UniProtKB/TrEMBL. DT 23-SEP-2008, sequence version 1. DT 14-MAY-2014, entry version 25. DE SubName: Full=Type IV secretory pathway, VirB3 component; GN Name=virB3; OrderedLocusNames=PHZ_c2349; OS Phenylobacterium zucineum (strain HLK1). OC Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; OC Caulobacteraceae; Phenylobacterium. OX NCBI_TaxID=450851; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=HLK1; RX PubMed=18700039; DOI=10.1186/1471-2164-9-386; RA Luo Y., Xu X., Ding Z., Liu Z., Zhang B., Yan Z., Sun J., Hu S., RA Hu X.; RT "Complete genome of Phenylobacterium zucineum - a novel facultative RT intracellular bacterium isolated from human erythroleukemia cell line RT K562."; RL BMC Genomics 9:386-386(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000747; ACG78759.1; -; Genomic_DNA. DR RefSeq; YP_002131188.1; NC_011144.1. DR STRING; 450851.PHZ_c2349; -. DR EnsemblBacteria; ACG78759; ACG78759; PHZ_c2349. DR GeneID; 6791870; -. DR KEGG; pzu:PHZ_c2349; -. DR PATRIC; 22927812; VBIPheZuc44517_2970. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; TIGIAMH; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; PZUC450851:GHUG-2384-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 112 AA; 12152 MW; 78F707DC5CA3296A CRC64; MRNAERLTED PLFLACTRPA LFLGVPMEAV GANLIVSATA FLAGGSLAWL LVAPALHLVF QAICKSDPNA FRVLYLFIET KGRARNGRLW GGSSPTPLPL RRRFATAEVT RG // ID B4RHX7_PHEZH Unreviewed; 111 AA. AC B4RHX7; DT 23-SEP-2008, integrated into UniProtKB/TrEMBL. DT 23-SEP-2008, sequence version 1. DT 14-MAY-2014, entry version 24. DE SubName: Full=VirB3 type IV secretion protein; GN Name=virB3; OrderedLocusNames=PHZ_p0009; OS Phenylobacterium zucineum (strain HLK1). OG Plasmid pHLK1. OC Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; OC Caulobacteraceae; Phenylobacterium. OX NCBI_TaxID=450851; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=HLK1; RX PubMed=18700039; DOI=10.1186/1471-2164-9-386; RA Luo Y., Xu X., Ding Z., Liu Z., Zhang B., Yan Z., Sun J., Hu S., RA Hu X.; RT "Complete genome of Phenylobacterium zucineum - a novel facultative RT intracellular bacterium isolated from human erythroleukemia cell line RT K562."; RL BMC Genomics 9:386-386(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000748; ACG79952.1; -; Genomic_DNA. DR RefSeq; YP_002128527.1; NC_011143.1. DR STRING; 450851.PHZ_p0009; -. DR EnsemblBacteria; ACG79952; ACG79952; PHZ_p0009. DR GeneID; 6788640; -. DR KEGG; pzu:PHZ_p0009; -. DR PATRIC; 22921817; VBIPheZuc44517_0008. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; HDHNMFR; -. DR OrthoDB; EOG6VMTNS; -. DR BioCyc; PZUC450851:GHUG-3588-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 111 AA; 12362 MW; 376902A364B5F118 CRC64; MPDEPLTEDM LFLACTRPAM LLGVPLEAMS VNMILTGLIF LAGGTPLYLL SGVVLHVLFR AIVKNDHNAF RVLFIWFDTK ARARNGGWWG GSSIAPLPVR RRYRPEEVAH G // ID B4S3J7_PROA2 Unreviewed; 83 AA. AC B4S3J7; DT 23-SEP-2008, integrated into UniProtKB/TrEMBL. DT 23-SEP-2008, sequence version 1. DT 14-MAY-2014, entry version 30. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Paes_1718; OS Prosthecochloris aestuarii (strain DSM 271 / SK 413). OC Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; OC Prosthecochloris. OX NCBI_TaxID=290512; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 271 / SK 413; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., RA Land M., Hauser L., Kyrpides N., Anderson I., Liu Z., Li T., Zhao F., RA Overmann J., Bryant D.A., Richardson P.; RT "Complete sequence of chromosome of Prosthecochloris aestuarii DSM RT 271."; RL Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001108; ACF46736.1; -; Genomic_DNA. DR RefSeq; YP_002016383.1; NC_011059.1. DR STRING; 290512.Paes_1718; -. DR EnsemblBacteria; ACF46736; ACF46736; Paes_1718. DR GeneID; 6458387; -. DR KEGG; paa:Paes_1718; -. DR PATRIC; 23043326; VBIProAes37017_1830. DR eggNOG; NOG265556; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; GHFLAVW; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; PAES290512:GHUT-1764-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 83 AA; 9309 MW; 92DDE0A2B761221F CRC64; MIEGYEVPVH RSLTDVILLG GVPRTLAFLL WTTAAAFGFG LHQLWVVPVG IVFHLVFAAA ARRDPFFFEV FVRALKAPKR MEP // ID B4S9L2_PROA2 Unreviewed; 83 AA. AC B4S9L2; DT 23-SEP-2008, integrated into UniProtKB/TrEMBL. DT 23-SEP-2008, sequence version 1. DT 14-MAY-2014, entry version 29. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Paes_2348; OS Prosthecochloris aestuarii (strain DSM 271 / SK 413). OG Plasmid pPAES01. OC Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; OC Prosthecochloris. OX NCBI_TaxID=290512; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 271 / SK 413; PLASMID=pPAES01; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., RA Land M., Hauser L., Kyrpides N., Anderson I., Liu Z., Li T., Zhao F., RA Overmann J., Bryant D.A., Richardson P.; RT "Complete sequence of plasmid of Prosthecochloris aestuarii DSM 271."; RL Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001109; ACF47339.1; -; Genomic_DNA. DR RefSeq; YP_002019693.1; NC_011061.1. DR STRING; 290512.Paes_2348; -. DR EnsemblBacteria; ACF47339; ACF47339; Paes_2348. DR GeneID; 6459031; -. DR KEGG; paa:Paes_2348; -. DR PATRIC; 23044651; VBIProAes37017_2488. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; WIPGLVV; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; PAES290512:GHUT-2398-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 83 AA; 9150 MW; BEC4C96E709CD0F1 CRC64; MSEEYSVPVH RSLAEVILIG GLPRTVAILL WTTAGAAGFG MQQLWVLPVA IVLHVVLAMT AKRDPHFFDV FVRALKSPKR LDP // ID B4SNC0_STRM5 Unreviewed; 102 AA. AC B4SNC0; DT 23-SEP-2008, integrated into UniProtKB/TrEMBL. DT 23-SEP-2008, sequence version 1. DT 14-MAY-2014, entry version 25. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Smal_2442; OS Stenotrophomonas maltophilia (strain R551-3). OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Stenotrophomonas; OC Stenotrophomonas maltophilia group. OX NCBI_TaxID=391008; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=R551-3; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., RA Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Mikhailova N., Taghavi S., Monchy S., Newman L., Vangronsveld J., RA van der Lelie D., Richardson P.; RT "Complete sequence of Stenotrophomonas maltophilia R551-3."; RL Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001111; ACF52145.1; -; Genomic_DNA. DR RefSeq; YP_002028828.1; NC_011071.1. DR STRING; 391008.Smal_2442; -. DR EnsemblBacteria; ACF52145; ACF52145; Smal_2442. DR GeneID; 6476932; -. DR KEGG; smt:Smal_2442; -. DR PATRIC; 23709854; VBISteMal40512_2472. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; MAKRDEM; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; SMAL391008:GH1H-2503-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 102 AA; 12118 MW; 2D6AF52CD2E352A6 CRC64; MHKNVVFRGC TRPAMFLGVP YLPFFMVAGG LLLLSMYTNF WFLLTIPVAV FIMRHMAKRD EMIFRLLGLR LMFKLKVRNV QEHDGMWVLN PNHYRNKPAR MD // ID B4TM64_SALSV Unreviewed; 916 AA. AC B4TM64; DT 23-SEP-2008, integrated into UniProtKB/TrEMBL. DT 23-SEP-2008, sequence version 1. DT 14-MAY-2014, entry version 38. DE SubName: Full=TriC protein; GN OrderedLocusNames=SeSA_B0108; OS Salmonella schwarzengrund (strain CVM19633). OG Plasmid pCVM19633_110. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella. OX NCBI_TaxID=439843; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CVM19633; RA Ravel J., Fricke W.F., White D., McDermott P., Mammel M., Rosovitz M., RA Leclerc J., Cebula T., Sebastian Y.; RT "Complete genome of Salmonella schwarzengrund strain CVM19633."; RL Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001125; ACF88543.1; -; Genomic_DNA. DR RefSeq; YP_002112984.1; NC_011092.1. DR STRING; 439843.SeSA_B0108; -. DR EnsemblBacteria; ACF88543; ACF88543; SeSA_B0108. DR PATRIC; 32368641; VBISalEnt87589_0099. DR eggNOG; COG3451; -. DR HOGENOM; HOG000119263; -. DR OMA; FIAMRAM; -. DR OrthoDB; EOG6HMX9P; -. DR BioCyc; SENT439843:GHHR-4852-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR003593; AAA+_ATPase. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SMART; SM00382; AAA; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 916 AA; 105115 MW; FF3840F26454AAFB CRC64; MTILNKALTR PAALWGVPLV PLLFTLCILT LAAVWSRFYW LLLLLIPAFI ELRRLAKEDI HFFDLKLLAF KTRGNRAATR HFGTKALVAN QYDAIDVTEF IKHMRLNESI PLSRYLPWSS HLHEQVVKNK KGDFVSTWEI GGIIFECEDE HYLATLDMQL NNVIRSFEGL PVTFYTHLVS DEFTDTLECE SGIPFSDEIA RLFYASREGK PFYQRRLFFT VCFNPHTGIE RATMKQKSLG ERKTLLDNAL QVMQEHRQAI GTALSRYAAR PLGTYEENGH VFSSQLAFYN FLITGRWQKV RVTRTPFYDV LGGTDIFPST DIGQVSHTDG QSYFRGLEIK DYSTETITGL YDSLLYARCR YLFTQSYTCM GKDEARGCIR TIEKRLKSAE DDAISQQEDL KVARDMLQSG IISFGKYHQT LIVSAPTSEQ VIRDTNTLAD TLKDLGFIMT LSRESLSAAY LAQLPGVYHL RPRLVPVSSL NYAEMVSFHN FHPHKRDGNA WGEAIAVVPT PSGGCQYVNL HNSQADVDEF SEKPPGNTML LGSTGTGKST LLMMFQHLMQ KYRRPESFAP GATKKRFTSV VFDKDRSAEM SIRLQGGSYF RFRSGEKTGL NPFALAPTKR NRNFLKKLMR MMCTRDGKPL DPRDEERLSE AVDTIMLDYP PELRRNGITR MLEVLHEAPT KDARMNGLRI RLQQWAQGGE FGWVFDNDVD TFDIDNIDNF GIDGTEFLND KDVRSPLTFY LLYRVTSLLD GRRLVIFMDE FWKWLQDPEF SKFALDMLKV IRKLNGIFFP ATQSPEEMCK HEISAAIIEQ CSTRIFMANQ QAKEYDYVDM LRVPKAVYDI VTTLDPYARQ MVIMKSPLRR GDVRPYIAQI TLDLSGLGRY TKLLSASADN LKIFDEIWQE GMKPEDWKDE MLRRAV // ID B4W824_9CAUL Unreviewed; 95 AA. AC B4W824; DT 23-SEP-2008, integrated into UniProtKB/TrEMBL. DT 23-SEP-2008, sequence version 1. DT 03-APR-2013, entry version 7. DE SubName: Full=Putative uncharacterized protein; GN ORFNames=BBAL3_924; OS Brevundimonas sp. BAL3. OC Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; OC Caulobacteraceae; Brevundimonas. OX NCBI_TaxID=391600; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=BAL3; RA Hagstrom A., Ferriera S., Johnson J., Kravitz S., Beeson K., RA Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.; RL Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS989898; EDX79767.1; -; Genomic_DNA. DR EnsemblBacteria; EDX79767; EDX79767; BBAL3_924. DR PATRIC; 29028252; VBIBreSp110930_1627. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 95 AA; 10680 MW; 2A1C78F7497032B9 CRC64; MGQTSQILLD RRPDGYELPV AQALAEPVLM AGMPRDYAIL MGTIALMLGL ALRIWWLGLL WWAIAHAIGL YAARTDRRFF DVLRRHLALP GHLDG // ID B4YK32_9BURK Unreviewed; 143 AA. AC B4YK32; DT 23-SEP-2008, integrated into UniProtKB/TrEMBL. DT 23-SEP-2008, sequence version 1. DT 13-NOV-2013, entry version 6. DE SubName: Full=TagB3; GN Name=tagB3; OS Advenella mimigardefordensis. OG Plasmid pBTK445. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Alcaligenaceae. OX NCBI_TaxID=302406; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=WGT; PLASMID=pBTK445; RX PubMed=19411426; DOI=10.1128/AEM.02521-08; RA Dam B., Ghosh W., Das Gupta S.K.; RT "Conjugative Type 4 secretion system of a novel large plasmid from the RT chemoautotroph Tetrathiobacter kashmirensis and construction of RT shuttle vectors for Alcaligenaceae."; RL Appl. Environ. Microbiol. 75:4362-4373(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EU585932; ACD43629.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 143 AA; 16255 MW; 165B465E0F6D42C0 CRC64; MQDDKQYEKK GYPTFNALGR AALVLGIPVI PLALVMGGSL ALTMLLMSVL KGKALLFMLI PIPVVIFMKT VSSNDDQALK IIGYELMCWF YRRNAAIFNG TTTILATHFG RNLNDYQRFV EQHTEKTDLR RYVPAENIPT YHR // ID B5CJW6_SALET Unreviewed; 916 AA. AC B5CJW6; DT 14-OCT-2008, integrated into UniProtKB/TrEMBL. DT 14-OCT-2008, sequence version 1. DT 16-APR-2014, entry version 18. DE SubName: Full=TriC protein; GN ORFNames=SeSB_B0057; OS Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella. OX NCBI_TaxID=454165; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=SL480; RX PubMed=21602358; DOI=10.1128/JB.00297-11; RA Fricke W.F., Mammel M.K., McDermott P.F., Tartera C., White D.G., RA Leclerc J.E., Ravel J., Cebula T.A.; RT "Comparative genomics of 28 Salmonella enterica isolates: evidence for RT CRISPR-mediated adaptive sublineage evolution."; RL J. Bacteriol. 193:3556-3568(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ABEJ01000032; EDY27212.1; -; Genomic_DNA. DR EnsemblBacteria; EDY27212; EDY27212; SeSB_B0057. DR PATRIC; 28007471; VBISalEnt97326_4447. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR003593; AAA+_ATPase. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SMART; SM00382; AAA; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 916 AA; 105115 MW; FF3840F26454AAFB CRC64; MTILNKALTR PAALWGVPLV PLLFTLCILT LAAVWSRFYW LLLLLIPAFI ELRRLAKEDI HFFDLKLLAF KTRGNRAATR HFGTKALVAN QYDAIDVTEF IKHMRLNESI PLSRYLPWSS HLHEQVVKNK KGDFVSTWEI GGIIFECEDE HYLATLDMQL NNVIRSFEGL PVTFYTHLVS DEFTDTLECE SGIPFSDEIA RLFYASREGK PFYQRRLFFT VCFNPHTGIE RATMKQKSLG ERKTLLDNAL QVMQEHRQAI GTALSRYAAR PLGTYEENGH VFSSQLAFYN FLITGRWQKV RVTRTPFYDV LGGTDIFPST DIGQVSHTDG QSYFRGLEIK DYSTETITGL YDSLLYARCR YLFTQSYTCM GKDEARGCIR TIEKRLKSAE DDAISQQEDL KVARDMLQSG IISFGKYHQT LIVSAPTSEQ VIRDTNTLAD TLKDLGFIMT LSRESLSAAY LAQLPGVYHL RPRLVPVSSL NYAEMVSFHN FHPHKRDGNA WGEAIAVVPT PSGGCQYVNL HNSQADVDEF SEKPPGNTML LGSTGTGKST LLMMFQHLMQ KYRRPESFAP GATKKRFTSV VFDKDRSAEM SIRLQGGSYF RFRSGEKTGL NPFALAPTKR NRNFLKKLMR MMCTRDGKPL DPRDEERLSE AVDTIMLDYP PELRRNGITR MLEVLHEAPT KDARMNGLRI RLQQWAQGGE FGWVFDNDVD TFDIDNIDNF GIDGTEFLND KDVRSPLTFY LLYRVTSLLD GRRLVIFMDE FWKWLQDPEF SKFALDMLKV IRKLNGIFFP ATQSPEEMCK HEISAAIIEQ CSTRIFMANQ QAKEYDYVDM LRVPKAVYDI VTTLDPYARQ MVIMKSPLRR GDVRPYIAQI TLDLSGLGRY TKLLSASADN LKIFDEIWQE GMKPEDWKDE MLRRAV // ID B5EKP2_ACIF5 Unreviewed; 125 AA. AC B5EKP2; DT 14-OCT-2008, integrated into UniProtKB/TrEMBL. DT 14-OCT-2008, sequence version 1. DT 14-MAY-2014, entry version 21. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=Lferr_0246; OS Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum OS ferrooxidans (ATCC 53993)). OC Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; OC Acidithiobacillaceae; Acidithiobacillus. OX NCBI_TaxID=380394; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 53993; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., RA Detter J.C., Han C., Kuske C.R., Larimer F., Land M., Hauser L., RA Kyrpides N., Lykidis A., Borole A.P.; RT "Complete sequence of Acidithiobacillus ferrooxidans ATCC 53993."; RL Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001132; ACH82504.1; -; Genomic_DNA. DR RefSeq; YP_002218711.1; NC_011206.1. DR STRING; 380394.Lferr_0246; -. DR EnsemblBacteria; ACH82504; ACH82504; Lferr_0246. DR GeneID; 6876196; -. DR KEGG; afe:Lferr_0246; -. DR PATRIC; 20658020; VBIAciFer6930_0236. DR eggNOG; bactNOG97194; -. DR HOGENOM; HOG000072892; -. DR KO; K03198; -. DR OrthoDB; EOG6N6849; -. DR BioCyc; AFER380394:GHE0-247-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 125 AA; 13643 MW; 84FA7083E51F45F4 CRC64; MAAELTRRLP LHPSLTRPML VAGGEREATF ALWFVCLSIP VLVSLWFIPV GLIVGGVGQS FLRTLAKHDP QSFGVVRRHW SQQAVYLGGA SAYAPVKYKA PKEQTQSAAS GGLLKALSKL MRKKK // ID B5ERQ1_ACIF5 Unreviewed; 125 AA. AC B5ERQ1; DT 14-OCT-2008, integrated into UniProtKB/TrEMBL. DT 14-OCT-2008, sequence version 1. DT 14-MAY-2014, entry version 24. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=Lferr_1338; OS Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum OS ferrooxidans (ATCC 53993)). OC Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; OC Acidithiobacillaceae; Acidithiobacillus. OX NCBI_TaxID=380394; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 53993; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., RA Detter J.C., Han C., Kuske C.R., Larimer F., Land M., Hauser L., RA Kyrpides N., Lykidis A., Borole A.P.; RT "Complete sequence of Acidithiobacillus ferrooxidans ATCC 53993."; RL Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001132; ACH83572.1; -; Genomic_DNA. DR RefSeq; YP_002219779.1; NC_011206.1. DR STRING; 380394.Lferr_1338; -. DR EnsemblBacteria; ACH83572; ACH83572; Lferr_1338. DR GeneID; 6877312; -. DR KEGG; afe:Lferr_1338; -. DR PATRIC; 20660270; VBIAciFer6930_1339. DR eggNOG; bactNOG97194; -. DR HOGENOM; HOG000072892; -. DR KO; K03198; -. DR OMA; QYKAPKE; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; AFER380394:GHE0-1363-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 125 AA; 13611 MW; FAF6BC60769D0F53 CRC64; MAAEHTRRLP LHPSLTKPML VAGGEREATF ALWFVCLSIP VLVSLWFIPV GLIVGGVGQS FLRTLAKHDP QSFGVVRRHW SQQSVYLGGA SAYAPVQYKA PKEQTQSAAS GGVLKALANL MRKKK // ID B5FGZ7_SALDC Unreviewed; 876 AA. AC B5FGZ7; DT 14-OCT-2008, integrated into UniProtKB/TrEMBL. DT 14-OCT-2008, sequence version 1. DT 14-MAY-2014, entry version 33. DE SubName: Full=Pilx4 protein; GN OrderedLocusNames=SeD_B0102; OS Salmonella dublin (strain CT_02021853). OG Plasmid pCT02021853_74. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella. OX NCBI_TaxID=439851; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CT_02021853; RA Ravel J., Fricke W.F., White D., McDermott P., Mammel M., Rosovitz M., RA Leclerc J., Cebula T., Sebastian Y.; RT "Complete genome of Salmonella dublin strain CT_02021853."; RL Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001143; ACH73562.1; -; Genomic_DNA. DR RefSeq; YP_002213932.1; NC_011204.1. DR STRING; 439851.SeD_B0102; -. DR EnsemblBacteria; ACH73562; ACH73562; SeD_B0102. DR PATRIC; 18488194; VBISalEnt111443_0075. DR eggNOG; COG3451; -. DR HOGENOM; HOG000119263; -. DR OMA; FIAMRAM; -. DR OrthoDB; EOG6HMX9P; -. DR BioCyc; SENT439851:GH2Z-5052-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 876 AA; 100541 MW; 3DC7195088DCD2CC CRC64; MYALILPGWY AIRRVTQFDE RFFDLLYLRT LVKGHPLSNK RFSAVHYAGS QYDEVDISKV DNFMKLKDQS SVEELIPYSS HITDNIIVTK NRDLLATWQI DGAYFECVDS EDLSILTDQL NTLIRSFEGK SVTLYPHRIR CKKDVRPVFN SKIPFVNRVM NDYYESFPQS EFFENKLFLT ICFKPFTTED KVTHFFSRSK KQKDIFKEPV NEMNEICDRL NTYLSRFHSR RLGLYEDHGV VYSDQLSLFQ YLLSGRWQKV RVSSSPFYTY LGGKDLFFGN DAGQITASDH ARYFRCIEIK DYFQETDAGI LDALMYLPVE YVVTSSFTAM DKQSAIKALD DQIDKLEMTD DAAKSLLADL KVGLDMVSSG YISFGKSHQT LVVFADSPER LVKDTNIVTS TLEDLGLIVT YSTLSLGAAY FAQLPGNYTL RPRLSTLSSL NFAEMESFHN FFSGKEKGNT WGEKLITLRG SGNDIYHLNY HMTTEHQNFF GKNPTLGNTE ILGTSNVGKT VLLMTKAFAA QQFGTPESFP ANRKLKKLTT VFFDKDRAGE VGIRAMGGSY YRVKEGEPTG WNPAALPPTK RNIAFMKDLV RLLCTLNSEP LDDYQNSLIS DAVERLMQRS DRSYPISKLR PLIQEPDDTE TKRHGLKARL KPWTQGEEFG WVFDNREDTF DVDNLDVFGI DGTEFLDNKV LASAASFYLI YRVTMLADGR RLLIYMDEFW QWINNEAFRD FVYNKLKTGR KLDMVLVVAT QSPDELIKSP IAAAVREQCA THIYLANPKA KRSEYVDGLQ VRELYFDKIK AIDPLSRQFL VVKNPQRKGE SDDFAAFARL ELGKAAYYLP VLSASKPQLE LFDEIWKEGM KPEEWLDTYL EQANLI // ID B5P957_SALET Unreviewed; 917 AA. AC B5P957; DT 04-NOV-2008, integrated into UniProtKB/TrEMBL. DT 04-NOV-2008, sequence version 1. DT 16-APR-2014, entry version 12. DE SubName: Full=CagE, TrbE, VirB family, component of type IV transporter system; GN ORFNames=SeHB_A4802; OS Salmonella enterica subsp. enterica serovar Heidelberg str. SL486. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella. OX NCBI_TaxID=454164; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=SL486; RX PubMed=21602358; DOI=10.1128/JB.00297-11; RA Fricke W.F., Mammel M.K., McDermott P.F., Tartera C., White D.G., RA Leclerc J.E., Ravel J., Cebula T.A.; RT "Comparative genomics of 28 Salmonella enterica isolates: evidence for RT CRISPR-mediated adaptive sublineage evolution."; RL J. Bacteriol. 193:3556-3568(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ABEL01000021; EDZ23053.1; -; Genomic_DNA. DR EnsemblBacteria; EDZ23053; EDZ23053; SeHB_A4802. DR PATRIC; 27949282; VBISalEnt60298_4335. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 917 AA; 105059 MW; C156E0687752760E CRC64; MSTLFKGLTR PALIRGLGVP LYPFLGMCII CVLLGVWIHE AMYALILPGW YAIRRVTQFD ERFFDLLYLR TLVKGHPLSN KRFSAVHYAG SQYDEVDISK VDNFMKLKDQ SSVEELIPYS SHITDNIIVT KNRDLLATWQ IDGAYFECVD SEDLSILTDQ LNTLIRSFEG KSVTLYPHRI RCKKDVRPVF NSKIPFVNRV MNDYYESFPQ SEFFENKLFL TICFKPFTTE DKVTHFFSRS KKQKDIFKEP VNEMNEICDR LNTYLSRFHS RRLGLYEDHG VVYSDQLSLF QYLLSGRWQK VRVSSSPFYT YLGGKDLFFG NDAGQITASD HARYFRCIEI KDYFQETDAG ILDALMYLPV EYVVTSSFTA MDKQSAIKAL DDQIDKLEMT DDAAKSLLAD LKVGLDMVSS GYISFGKSHQ TLVVFADSPE RLVKDTNIVT STLEDLGLIV TYSTLSLGAA YFAQLPGNYT LRPRLSILSS LNFAEMESFH NFFSGKEKGN TWGEKLITLR GSGNDIYHLN YHMTTEHQNF FGKNPTLGHT EILGTSNVGK TVLLMTKAFA AQQFGTPESF PANRKLKKLT TVFFDKDRAG EVGIRAMGGS YYRVKEGEPT GWNPAALPPT KRNIAFMKDL VRLLCTLNSE PLDDYQNSLI SDAVERLMQR SDRSYPISKL RPLIQEPDDT ETKRHGLKAR LKPWTQGEEF GWVFDNREDT FDVDNLDVFG IDGTEFLDNK VLASAASFYL IYRVTMLADG RRLLIYMDEF WQWINNEAFR DFVYNKLKTG RKLDMVLVVA TQSPDELIKS PIAAAVREQC ATHIYLANPK AKRSEYVDGL QVRELYFDKI KAIDPLSRQF LVVKNPQRKG ESDDFAAFAR LELGKAAYYL PVLSASKPQL ELFDEIWKEG MKPEEWLDTY LEQANLI // ID B5TTE4_9BACT Unreviewed; 108 AA. AC B5TTE4; DT 04-NOV-2008, integrated into UniProtKB/TrEMBL. DT 04-NOV-2008, sequence version 1. DT 13-NOV-2013, entry version 7. DE SubName: Full=TraD; GN Name=traD; ORFNames=V216_05; OS uncultured bacterium HHV216. OG Plasmid pHHV216. OC Bacteria; environmental samples. OX NCBI_TaxID=558687; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pHHV216; RX PubMed=19055690; DOI=10.1111/j.1462-2920.2008.01819.x; RA Heuer H., Kopmann C., Binh C.T., Top E.M., Smalla K.; RT "Spreading antibiotic resistance through spread manure: RT characteristics of a novel plasmid type with low %G+C content."; RL Environ. Microbiol. 11:937-949(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ012880; ACI02863.1; -; Genomic_DNA. DR RefSeq; YP_006960685.1; NC_019217.1. DR GeneID; 13917462; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 108 AA; 12582 MW; 8F3DE2A9AFBE50CC CRC64; MSNFSDPIFR GCTRPAMLFG VPMLPFLLVT GVAILLAGWS FYLLSAYVTL FIAAIYVPIY FWMRAITKVD DQRLKQVLMR WRIRGKQIQN HQKWGAISFS PLKLKKRK // ID B5TTJ8_9BACT Unreviewed; 108 AA. AC B5TTJ8; DT 04-NOV-2008, integrated into UniProtKB/TrEMBL. DT 04-NOV-2008, sequence version 1. DT 13-NOV-2013, entry version 7. DE SubName: Full=TraD; GN Name=traD; ORFNames=1107_15; OS uncultured bacterium HH1107. OG Plasmid pHH1107. OC Bacteria; environmental samples. OX NCBI_TaxID=558688; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pHH1107; RX PubMed=19055690; DOI=10.1111/j.1462-2920.2008.01819.x; RA Heuer H., Kopmann C., Binh C.T., Top E.M., Smalla K.; RT "Spreading antibiotic resistance through spread manure: RT characteristics of a novel plasmid type with low %G+C content."; RL Environ. Microbiol. 11:937-949(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ012881; ACI02917.1; -; Genomic_DNA. DR RefSeq; YP_006962101.1; NC_019299.1. DR GeneID; 13918513; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 108 AA; 12582 MW; 8F3DE2A9AFBE50CC CRC64; MSNFSDPIFR GCTRPAMLFG VPMLPFLLVT GVAILLAGWS FYLLSAYVTL FIAAIYVPIY FWMRAITKVD DQRLKQVLMR WRIRGKQIQN HQKWGAISFS PLKLKKRK // ID B5TTQ1_9BACT Unreviewed; 108 AA. AC B5TTQ1; DT 04-NOV-2008, integrated into UniProtKB/TrEMBL. DT 04-NOV-2008, sequence version 1. DT 13-NOV-2013, entry version 7. DE SubName: Full=TraD; GN Name=traD; ORFNames=V35_13; OS uncultured bacterium HHV35. OG Plasmid pHHV35. OC Bacteria; environmental samples. OX NCBI_TaxID=558689; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pHHV35; RX PubMed=19055690; DOI=10.1111/j.1462-2920.2008.01819.x; RA Heuer H., Kopmann C., Binh C.T., Top E.M., Smalla K.; RT "Spreading antibiotic resistance through spread manure: RT characteristics of a novel plasmid type with low %G+C content."; RL Environ. Microbiol. 11:937-949(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ012882; ACI02970.1; -; Genomic_DNA. DR RefSeq; YP_006960739.1; NC_019218.1. DR GeneID; 13917517; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 108 AA; 12582 MW; 8F3DE2A9AFBE50CC CRC64; MSNFSDPIFR GCTRPAMLFG VPMLPFLLVT GVAILLAGWS FYLLSAYVTL FIAAIYVPIY FWMRAITKVD DQRLKQVLMR WRIRGKQIQN HQKWGAISFS PLKLKKRK // ID B5XPN7_KLEP3 Unreviewed; 915 AA. AC B5XPN7; DT 25-NOV-2008, integrated into UniProtKB/TrEMBL. DT 25-NOV-2008, sequence version 1. DT 14-MAY-2014, entry version 31. DE SubName: Full=Type IV secretion/conjugal transfer ATPase, VirB4 family; GN OrderedLocusNames=KPK_1783; OS Klebsiella pneumoniae (strain 342). OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Klebsiella. OX NCBI_TaxID=507522; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=342; RX PubMed=18654632; DOI=10.1371/journal.pgen.1000141; RA Fouts D.E., Tyler H.L., DeBoy R.T., Daugherty S., Ren Q., Badger J.H., RA Durkin A.S., Huot H., Shrivastava S., Kothari S., Dodson R.J., RA Mohamoud Y., Khouri H., Roesch L.F., Krogfelt K.A., Struve C., RA Triplett E.W., Methe B.A.; RT "Complete genome sequence of the N2-fixing broad host range endophyte RT Klebsiella pneumoniae 342 and virulence predictions verified in RT mice."; RL PLoS Genet. 4:E1000141-E1000141(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000964; ACI09642.1; -; Genomic_DNA. DR RefSeq; YP_002237630.1; NC_011283.1. DR STRING; 507522.KPK_1783; -. DR EnsemblBacteria; ACI09642; ACI09642; KPK_1783. DR GeneID; 6937275; -. DR KEGG; kpe:KPK_1783; -. DR PATRIC; 20437078; VBIKlePne121904_1923. DR eggNOG; COG3451; -. DR HOGENOM; HOG000119263; -. DR KO; K03199; -. DR OMA; RYFRIRT; -. DR OrthoDB; EOG6HMX9P; -. DR BioCyc; KPNE507522:GI0B-1784-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 915 AA; 104352 MW; 17799E34A094F6CE CRC64; MATLNKALTR PAAIMGIPLV PFVLVSGAIV LLAVYVSYYL AVLLIPAWAE MKNKARKDIH YFSLLWLAFK TRGRLFTNTH FGANALLANQ YDNVDVSEFI QKMKLSERIT LDKYIPYSSH IHPYVIRNRH RDFVATWELG GTVFECEDEH HLTLMATHLN NVIRSYEGLP LTFYIHRLRE KYHDVFEACS GIPFSDEVTR RYYQPVKEKP FWRHRLFFTV CYAPFSQIEK KTMKAQPHGK RLAALDDALK IMLEYREALE SSLSRYMAMP LGIYEENGRV YSSQVAFFHR LITGQWQKVA VTRSPFYETL STPDVFFTTD TGECQTVSGS RFFRSLEIKD YSPETHTGML DALLYAESEY VLTQSFTCMA RDEAQHHIRL AEKRLNSTDD DATSQREELI VLRDLLQSGH VSCGKFHFSL LISSDSAGQV VKDTNVLAQP FADLGIMTTL STLSLPAAYL AQLPGVYTLR PRLVAVSSQN FADMACLHNF HPHKRSGNPW REAVAILTSP GGGGYYLNLH DSQAGRDDTG EKTPGNTAII GKTGSGKTLL MTIMQQLMQK YRNPASFAPS ATIKRLTTVY FDKDRAAEMA IRQMGGRYFR IRTGEPTGFN PFALEPTRRN ISFIKRLVRM LCRRNGKPLD PRDEERISAA VDTIMLDYPP EYRRYGITRL LEVLPEPPTT DARTNGLRIR LKQWAQGGEF GWVFDNEADT FTISDVDNFG IDGTEFLDDD DIRGPVTFYL LYRVTSLLDG RRLVMFMDEF WRWLADVEFS RFSLNMLKVI RKLNGIFVPA TQSPDEIVRH PIAPAIIEQC GTQIFLANPK ASYADYVEKM KVPESVYDTV RNLDPGEHYM VILKTPLQAG ETRPFVAMAK MDLSGLGKLT RLLSGSEDNL KIFDAIYQDG MRPDEWKETF LERAI // ID B5Z4X0_ECO5E Unreviewed; 116 AA. AC B5Z4X0; DT 25-NOV-2008, integrated into UniProtKB/TrEMBL. DT 25-NOV-2008, sequence version 1. DT 14-MAY-2014, entry version 25. DE SubName: Full=Conjugal transfer protein TraD; GN OrderedLocusNames=ECH74115_A0011; OS Escherichia coli O157:H7 (strain EC4115 / EHEC). OG Plasmid pEC4115. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=444450; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=EC4115 / EHEC; PLASMID=pEC4115; RX PubMed=22135463; DOI=10.1073/pnas.1107176108; RA Eppinger M., Mammel M.K., Leclerc J.E., Ravel J., Cebula T.A.; RT "Genomic anatomy of Escherichia coli O157:H7 outbreaks."; RL Proc. Natl. Acad. Sci. U.S.A. 108:20142-20147(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001165; ACI39845.1; -; Genomic_DNA. DR RefSeq; YP_002268521.1; NC_011351.1. DR STRING; 444450.ECH74115_A0011; -. DR EnsemblBacteria; ACI39845; ACI39845; ECH74115_A0011. DR GeneID; 6966509; -. DR KEGG; ecf:ECH74115_A0011; -. DR eggNOG; NOG148097; -. DR HOGENOM; HOG000063015; -. DR KO; K03198; -. DR OMA; ICENDPN; -. DR OrthoDB; EOG67X20P; -. DR BioCyc; ECOL444450:GHOB-6022-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 116 AA; 13012 MW; 384DA58C2C0BB2FC CRC64; MSACAIQELM MNDTEKPKVV FLSYNGLNRP AMIRGVPLML FLSVGFLAVF GGFGCMFMWG ISGLIFPALC FLFLFIVRII CENDPNALSV MNLQLKGYFL KVMHRDSIIG FSSVER // ID B5ZFJ9_GLUDA Unreviewed; 91 AA. AC B5ZFJ9; DT 25-NOV-2008, integrated into UniProtKB/TrEMBL. DT 25-NOV-2008, sequence version 1. DT 14-MAY-2014, entry version 20. DE SubName: Full=Putative conjugal transfer protein TrbD; GN OrderedLocusNames=Gdia_0964; OS Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / OS PAl5). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Acetobacteraceae; Gluconacetobacter. OX NCBI_TaxID=272568; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 49037 / DSM 5601 / PAl5; RX PubMed=21304715; DOI=10.4056/sigs.972221; RA Giongo A., Tyler H.L., Zipperer U.N., Triplett E.W.; RT "Two genome sequences of the same bacterial strain, Gluconacetobacter RT diazotrophicus PAl 5, suggest a new standard in genome sequence RT submission."; RL Stand. Genomic Sci. 2:309-317(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001189; ACI50748.1; -; Genomic_DNA. DR RefSeq; YP_002275363.1; NC_011365.1. DR STRING; 272568.GDI_0132; -. DR EnsemblBacteria; ACI50748; ACI50748; Gdia_0964. DR GeneID; 6974361; -. DR KEGG; gdj:Gdia_0964; -. DR PATRIC; 22050308; VBIGluDia203729_0967. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 91 AA; 9837 MW; CA3F1E935592FAE1 CRC64; MAGYDDDAVP GFHVPVHRSL TDPILLGGAP RAVAIANGTL AAAIALGLRL WLIGAVFWIV GHGLAVWGAK RDPFFIEVGR RHLRYPAWLR A // ID B5ZFZ2_GLUDA Unreviewed; 88 AA. AC B5ZFZ2; DT 25-NOV-2008, integrated into UniProtKB/TrEMBL. DT 25-NOV-2008, sequence version 1. DT 14-MAY-2014, entry version 20. DE SubName: Full=Putative conjugal transfer protein TrbD; GN OrderedLocusNames=Gdia_1011; OS Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / OS PAl5). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Acetobacteraceae; Gluconacetobacter. OX NCBI_TaxID=272568; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 49037 / DSM 5601 / PAl5; RX PubMed=21304715; DOI=10.4056/sigs.972221; RA Giongo A., Tyler H.L., Zipperer U.N., Triplett E.W.; RT "Two genome sequences of the same bacterial strain, Gluconacetobacter RT diazotrophicus PAl 5, suggest a new standard in genome sequence RT submission."; RL Stand. Genomic Sci. 2:309-317(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001189; ACI50794.1; -; Genomic_DNA. DR RefSeq; YP_002275409.1; NC_011365.1. DR STRING; 272568.GDI_1017; -. DR EnsemblBacteria; ACI50794; ACI50794; Gdia_1011. DR GeneID; 6974408; -. DR KEGG; gdj:Gdia_1011; -. DR PATRIC; 22050390; VBIGluDia203729_1008. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 88 AA; 9429 MW; 51358E5DF3EDC260 CRC64; MEPDSIPGFT APVHRALIEP ILLGGAPRTV AIVNGTLAAA IGLGLRLWIA GGLFWLVGHF AAVWAAKRDP AFVDVVRRHL RYPTHLVG // ID B5ZHT0_GLUDA Unreviewed; 91 AA. AC B5ZHT0; DT 25-NOV-2008, integrated into UniProtKB/TrEMBL. DT 25-NOV-2008, sequence version 1. DT 14-MAY-2014, entry version 20. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Gdia_2826; OS Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / OS PAl5). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Acetobacteraceae; Gluconacetobacter. OX NCBI_TaxID=272568; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 49037 / DSM 5601 / PAl5; RX PubMed=21304715; DOI=10.4056/sigs.972221; RA Giongo A., Tyler H.L., Zipperer U.N., Triplett E.W.; RT "Two genome sequences of the same bacterial strain, Gluconacetobacter RT diazotrophicus PAl 5, suggest a new standard in genome sequence RT submission."; RL Stand. Genomic Sci. 2:309-317(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001189; ACI52558.1; -; Genomic_DNA. DR RefSeq; YP_002277173.1; NC_011365.1. DR EnsemblBacteria; ACI52558; ACI52558; Gdia_2826. DR GeneID; 6976257; -. DR KEGG; gdj:Gdia_2826; -. DR PATRIC; 22054052; VBIGluDia203729_2802. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 91 AA; 9607 MW; E6A7A367BE488EB0 CRC64; MAAIVDPDVP GFFAPVHRAL TDPILMGGAP RTVAIANGTL AAAIALGLRL WIPGALIWAV GHAAAVWAAK RDPQFVDVVR RHLRYPAHLG V // ID B6A598_RHILW Unreviewed; 108 AA. AC B6A598; DT 25-NOV-2008, integrated into UniProtKB/TrEMBL. DT 25-NOV-2008, sequence version 1. DT 13-NOV-2013, entry version 18. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Rleg2_6205; OS Rhizobium leguminosarum bv. trifolii (strain WSM2304). OG Plasmid pRLG203. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium. OX NCBI_TaxID=395492; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=WSM2304; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., RA Lang D., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., RA Yates R., Ardley J., Tiwari R.P., O'Hara G., Howieson J., Brau L., RA Reeve W.; RT "Complete sequence of plasmid 3 of Rhizobium leguminosarum bv. RT trifolii WSM2304."; RL Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001195; ACI59581.1; -; Genomic_DNA. DR RefSeq; YP_002283973.1; NC_011370.1. DR STRING; 395492.Rleg2_6205; -. DR EnsemblBacteria; ACI59581; ACI59581; Rleg2_6205. DR GeneID; 6983278; -. DR KEGG; rlt:Rleg2_6205; -. DR PATRIC; 23133321; VBIRhiLeg95088_6450. DR KO; K03198; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; RLEG395492:GJB3-6272-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 108 AA; 11873 MW; D2A0F3AB44D08E5D CRC64; MAGSPSTADG GDDYIECHPV ILALTRPPTV MGIPYTYFLA ECFVSLMVFM ILGSIIWFPV SFVILHTILY VLTVKLDLWF FDIVGRLSLC GINPLGRRLG GGIRTYGA // ID B6AP95_9BACT Unreviewed; 104 AA. AC B6AP95; DT 25-NOV-2008, integrated into UniProtKB/TrEMBL. DT 25-NOV-2008, sequence version 1. DT 09-FEB-2010, entry version 5. DE SubName: Full=Putative conjugal transfer protein (TrbD); GN ORFNames=CGL2_08831003; OS Leptospirillum sp. Group II '5-way CG'. OC Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum. OX NCBI_TaxID=419541; RN [1] RP NUCLEOTIDE SEQUENCE. RX PubMed=14961025; DOI=10.1038/nature02340; RA Tyson G.W., Chapman J., Hugenholtz P., Allen E.E., Ram R.J., RA Richardson P.M., Solovyev V.V., Rubin E.M., Rokhsar D.S., RA Banfield J.F.; RT "Community structure and metabolism through reconstruction of RT microbial genomes from the environment."; RL Nature 428:37-43(2004). RN [2] RP NUCLEOTIDE SEQUENCE. RX PubMed=18651792; DOI=10.1371/journal.pbio.0060177; RA Simmons S.L., Dibartolo G., Denef V.J., Goltsman D.S., Thelen M.P., RA Banfield J.F.; RT "Population genomic analysis of strain variation in Leptospirillum RT group II bacteria involved in acid mine drainage formation."; RL PLoS Biol. 6:E177-E177(2008). RN [3] RP NUCLEOTIDE SEQUENCE. RG US DOE Joint Genome Institute (JGI-PGF); RA DiBartolo G., Denef V.J., Aliaga Goltsman D.S., Simmons S.L., RA Banfield J.F., Lucas S.L., Copeland A., Glavina del Rio T., Dalin E., RA Tice H., Bruce D., Goodwin L., Pitluck S.; RL Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS995260; EDZ39081.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 104 AA; 11644 MW; 6A83B6A9EBA87628 CRC64; MASRRTVPIH QSLVKPLLLA GGDRELVLFN VVLMAGTLFM MGLSVFSVSL TSLAGGLTHI GLVRMAKTDP QMRDVYLVFR KYRTFYPARP DARVKEKQKH RGAL // ID B6JA73_OLICO Unreviewed; 93 AA. AC B6JA73; DT 16-DEC-2008, integrated into UniProtKB/TrEMBL. DT 16-DEC-2008, sequence version 1. DT 14-MAY-2014, entry version 22. DE SubName: Full=Conjugal transfer protein TrbB; GN OrderedLocusNames=OCAR_4190; OS Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Oligotropha. OX NCBI_TaxID=504832; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 49405 / DSM 1227 / OM5 [Mississippi]; RX PubMed=18539730; DOI=10.1128/JB.00614-08; RA Paul D., Bridges S., Burgess S.C., Dandass Y., Lawrence M.L.; RT "Genome sequence of the chemolithoautotrophic bacterium Oligotropha RT carboxidovorans OM5T."; RL J. Bacteriol. 190:5531-5532(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001196; ACI91339.1; -; Genomic_DNA. DR RefSeq; YP_002287204.1; NC_011386.1. DR STRING; 504832.OCAR_4190; -. DR EnsemblBacteria; ACI91339; ACI91339; OCAR_4190. DR GeneID; 6992947; -. DR KEGG; oca:OCAR_4190; -. DR PATRIC; 22802373; VBIOliCar134280_0177. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; ALTEHIM; -. DR OrthoDB; EOG64BQ98; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9908 MW; 4084810B8403B50C CRC64; MTAGLEQLAE VPGFTVPVHR ALTEHIMLGG APRSIAIMNG TLAGAVGLGL RLWLVGLAIW AIGHFAAVWA AKRDPLFVEV GRRHLRIPGH LSV // ID B6JHP4_OLICO Unreviewed; 87 AA. AC B6JHP4; DT 16-DEC-2008, integrated into UniProtKB/TrEMBL. DT 16-DEC-2008, sequence version 1. DT 14-MAY-2014, entry version 27. DE SubName: Full=Conjugal transfer protein; DE SubName: Full=Putative conjugal transfer protein TrbD; GN Name=trbD; OrderedLocusNames=OCA5_c16200, OCAR_6428; OS Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Oligotropha. OX NCBI_TaxID=504832; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 49405 / DSM 1227 / OM5 [Mississippi], and OM5; RX PubMed=18539730; DOI=10.1128/JB.00614-08; RA Paul D., Bridges S., Burgess S.C., Dandass Y., Lawrence M.L.; RT "Genome sequence of the chemolithoautotrophic bacterium Oligotropha RT carboxidovorans OM5T."; RL J. Bacteriol. 190:5531-5532(2008). RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 49405 / DSM 1227 / OM5, and OM5; RX PubMed=21742883; DOI=10.1128/JB.05619-11; RA Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., RA Meyer O.; RT "Complete genome sequences of the chemolithoautotrophic Oligotropha RT carboxidovorans strains OM4 and OM5."; RL J. Bacteriol. 193:5043-5043(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001196; ACI93541.1; -; Genomic_DNA. DR EMBL; CP002826; AEI06334.1; -; Genomic_DNA. DR RefSeq; YP_002289406.1; NC_011386.1. DR RefSeq; YP_004632575.1; NC_015684.1. DR STRING; 504832.OCAR_6428; -. DR EnsemblBacteria; ACI93541; ACI93541; OCAR_6428. DR EnsemblBacteria; AEI06334; AEI06334; OCA5_c16200. DR GeneID; 10846752; -. DR GeneID; 6990316; -. DR KEGG; oca:OCAR_6428; -. DR KEGG; ocg:OCA5_c16200; -. DR PATRIC; 22806687; VBIOliCar134280_2294. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; PGLVLWI; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; OCAR504832:GJPZ-1620-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 87 AA; 9426 MW; 519E7FB3131E049B CRC64; MEEDVRGFFA PVHRALTEPI LLGGAPRTVA IANGTLAGAV GLGLRLWIAG LVIWAIGHFA AIWAAKRDAQ FVDVGRRHLR YPAHMDV // ID B6JJW2_OLICO Unreviewed; 93 AA. AC B6JJW2; DT 16-DEC-2008, integrated into UniProtKB/TrEMBL. DT 16-DEC-2008, sequence version 1. DT 14-MAY-2014, entry version 28. DE SubName: Full=Conjugal transfer protein TrbB; DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=OCA5_c05370, OCAR_7606; OS Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Oligotropha. OX NCBI_TaxID=504832; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 49405 / DSM 1227 / OM5 [Mississippi], and OM5; RX PubMed=18539730; DOI=10.1128/JB.00614-08; RA Paul D., Bridges S., Burgess S.C., Dandass Y., Lawrence M.L.; RT "Genome sequence of the chemolithoautotrophic bacterium Oligotropha RT carboxidovorans OM5T."; RL J. Bacteriol. 190:5531-5532(2008). RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 49405 / DSM 1227 / OM5, and OM5; RX PubMed=21742883; DOI=10.1128/JB.05619-11; RA Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., RA Meyer O.; RT "Complete genome sequences of the chemolithoautotrophic Oligotropha RT carboxidovorans strains OM4 and OM5."; RL J. Bacteriol. 193:5043-5043(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001196; ACI94706.1; -; Genomic_DNA. DR EMBL; CP002826; AEI05261.1; -; Genomic_DNA. DR RefSeq; YP_002290571.1; NC_011386.1. DR RefSeq; YP_004631502.1; NC_015684.1. DR STRING; 504832.OCAR_7606; -. DR EnsemblBacteria; ACI94706; ACI94706; OCAR_7606. DR EnsemblBacteria; AEI05261; AEI05261; OCA5_c05370. DR GeneID; 10845669; -. DR GeneID; 6990109; -. DR KEGG; oca:OCAR_7606; -. DR KEGG; ocg:OCA5_c05370; -. DR PATRIC; 22808991; VBIOliCar134280_3438. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; WAIGHIA; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; OCAR504832:GJPZ-537-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9964 MW; D021A3BB705B3030 CRC64; MATAFEQLDA VPGYSIPVHR ALTEHILLGG APRSIAILNG TLAGAVGLGL RLWLVGLLIW AIGHFAAVWA AKRDPLFVEV GRRHLRIPGH LSV // ID B6JK42_OLICO Unreviewed; 98 AA. AC B6JK42; DT 16-DEC-2008, integrated into UniProtKB/TrEMBL. DT 16-DEC-2008, sequence version 1. DT 14-MAY-2014, entry version 28. DE SubName: Full=Conjugal transfer protein; DE SubName: Full=Type IV secretion protein VirB3; GN Name=virB3; OrderedLocusNames=OCA5_pOC16701200, OCAR_7694; OS Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5). OG Plasmid pOC167. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Oligotropha. OX NCBI_TaxID=504832; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 49405 / DSM 1227 / OM5 [Mississippi], and OM5; RX PubMed=18539730; DOI=10.1128/JB.00614-08; RA Paul D., Bridges S., Burgess S.C., Dandass Y., Lawrence M.L.; RT "Genome sequence of the chemolithoautotrophic bacterium Oligotropha RT carboxidovorans OM5T."; RL J. Bacteriol. 190:5531-5532(2008). RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 49405 / DSM 1227 / OM5, OM5, and pOC167; PLASMID=pOC167; RX PubMed=21742883; DOI=10.1128/JB.05619-11; RA Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., RA Meyer O.; RT "Complete genome sequences of the chemolithoautotrophic Oligotropha RT carboxidovorans strains OM4 and OM5."; RL J. Bacteriol. 193:5043-5043(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001196; ACI94792.1; -; Genomic_DNA. DR EMBL; CP002828; AEI08316.1; -; Genomic_DNA. DR RefSeq; YP_002290657.1; NC_011386.1. DR RefSeq; YP_004634433.1; NC_015685.1. DR STRING; 504832.OCAR_7694; -. DR EnsemblBacteria; ACI94792; ACI94792; OCAR_7694. DR EnsemblBacteria; AEI08316; AEI08316; OCA5_pOC16701200. DR GeneID; 10848653; -. DR GeneID; 6990359; -. DR KEGG; oca:OCAR_7694; -. DR KEGG; ocg:OCA5_pOC16701200; -. DR PATRIC; 22809173; VBIOliCar134280_3529. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; VPYMAVV; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; OCAR504832:GJPZ-3520-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 98 AA; 11165 MW; 344E1E529BC013F1 CRC64; MTENELEDPL ITPLVKALTR APTLMGVPYM YFMFNGVVSS VCFLISHNLF MLLVAIPLHL FGFVMTLRDD RIFEILFVKS TKCPPRSRAF WAADSYSA // ID B6UYU0_KLEPN Unreviewed; 105 AA. AC B6UYU0; DT 16-DEC-2008, integrated into UniProtKB/TrEMBL. DT 16-DEC-2008, sequence version 1. DT 14-MAY-2014, entry version 16. DE SubName: Full=Conjugal transfer protein; DE SubName: Full=Conjugal transfer protein TraA; DE SubName: Full=TraA; DE SubName: Full=TraA,Inner membrane protein forms channel for type IV secretion of T-DNA complex, VirB3; DE SubName: Full=Uncharacterized protein; GN Name=traA; ORFNames=pkp469IL_0150, pkp53il_00155; OS Klebsiella pneumoniae. OG Plasmid 12, Plasmid pBK31551, Plasmid pIMP-HZ1, Plasmid pK18An, OG Plasmid pK45-67VIM, Plasmid pKP53IL, and Plasmid pkp469IL. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Klebsiella. OX NCBI_TaxID=573; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=12; PLASMID=12; RX PubMed=19258268; DOI=10.1128/AAC.01355-08; RA Gootz T.D., Lescoe M.K., Dib-Hajj F., Dougherty B.A., He W., RA Della-Latta P., Huard R.C.; RT "Genetic organization of transposase regions surrounding blaKPC RT carbapenemase genes on plasmids from Klebsiella strains isolated in a RT New York City hospital."; RL Antimicrob. Agents Chemother. 53:1998-2004(2009). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=K18An; PLASMID=pK18An; RA Le V.; RL Submitted (OCT-2012) to the EMBL/GenBank/DDBJ databases. RN [3] RP NUCLEOTIDE SEQUENCE. RC STRAIN=BK31551; PLASMID=pBK31551; RX PubMed=23114770; DOI=10.1128/AAC.01648-12; RA Chen L., Chavda K.D., Fraimow H.S., Mediavilla J.R., Melano R.G., RA Jacobs M.R., Bonomo R.A., Kreiswirth B.N.; RT "Complete Nucleotide Sequences of blaKPC-4- and blaKPC-5-Harboring RT IncN and IncX Plasmids from Klebsiella pneumoniae Strains Isolated in RT New Jersey."; RL Antimicrob. Agents Chemother. 57:269-276(2013). RN [4] RP NUCLEOTIDE SEQUENCE. RC STRAIN=CRE1; PLASMID=pIMP-HZ1; RX PubMed=23274671; DOI=10.1128/AAC.02298-12; RA Lo W.U., Cheung Y.Y., Lai E., Lung D., Que T.L., Ho P.L.; RT "Complete sequence of an IncN plasmid, pIMP-HZ1, carrying blaIMP-4 in RT a Klebsiella pneumoniae strain associated with medical travel to RT China."; RL Antimicrob. Agents Chemother. 57:1561-1562(2013). RN [5] RP NUCLEOTIDE SEQUENCE. RC STRAIN=K18An; PLASMID=pK18An; RA Le T.M.V., Nguyen T.K.N., Campbell J.I., Schultsz C., RA Cerdeno-Tarraga A.M., Thomson N.R., Farrar J.J., Baker S.; RT "Annotation of 3 multi-drug resistance qnrS1 harbouring plasmids and a RT widespread of qnrS1-containing transposons circulating in RT Enterobacteriaceae in Ho Chi Minh City, Vietnam."; RL Submitted (JAN-2013) to the EMBL/GenBank/DDBJ databases. RN [6] RP NUCLEOTIDE SEQUENCE. RC STRAIN=K45-67; PLASMID=pK45-67VIM; RA Naseer U.; RL Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases. RN [7] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pKP53IL; RA Chmelnitsky I., Shklyar M., Leavitt A., Sadovsky E., Navon-Venezia S., RA Edgar R., Carmeli Y.; RT "K. pneumoniae clinical isolate blaKPC-2-carrying plasmid."; RL Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases. RN [8] RP NUCLEOTIDE SEQUENCE. RC STRAIN=K45-67; PLASMID=pK45-67VIM; RA Cantas L.C., Samuelsen O.S., Naseer U.N., Sundsfjord A.S., Sorum H.S.; RT "Impact of the host and medical treatment on the transfer of a blaVIM- RT 1 IncN plasmid in an in vivo zebrafish gut model."; RL Submitted (JUN-2013) to the EMBL/GenBank/DDBJ databases. RN [9] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pkp469IL; RA Chmelnitsky I., Shklyar M., Leavitt A., Sadovsky E., Navon-Venezia S., RA Edgar R., Carmeli Y.; RT "KPC-2 encoding plasmids from Enterobacteriaceae in Israel."; RL Submitted (JUN-2013) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223605; ACI63064.1; -; Genomic_DNA. DR EMBL; JX457479; AFU34709.1; -; Genomic_DNA. DR EMBL; JX193301; AFZ77124.1; -; Genomic_DNA. DR EMBL; KF017315; AGN11800.1; -; Genomic_DNA. DR EMBL; KF181259; AGP03296.1; -; Genomic_DNA. DR EMBL; HF545435; CCN80119.1; -; Genomic_DNA. DR EMBL; HF955507; CDF32032.1; -; Genomic_DNA. DR RefSeq; YP_002287006.1; NC_011385.1. DR RefSeq; YP_006959567.1; NC_019166.1. DR RefSeq; YP_007195385.1; NC_019888.1. DR RefSeq; YP_007349686.1; NC_020088.1. DR RefSeq; YP_008076071.1; NC_021356.1. DR RefSeq; YP_008145000.1; NC_021622.1. DR GeneID; 13914240; -. DR GeneID; 14411251; -. DR GeneID; 15152970; -. DR GeneID; 15799371; -. DR GeneID; 16185089; -. DR GeneID; 6994027; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 105 AA; 12264 MW; BD45A3DAAC64DAF5 CRC64; MFVDGKRPLF KGATRLPRAL GVPRNVAMMI FMISASLFMI IHMWAILVFV FLWIPSAALT KYDDRMFRIM GLWLKTKFSN WFDSPFKQWG GSSYSSVDYK RKGLK // ID B6UZ49_KLEPN Unreviewed; 78 AA. AC B6UZ49; DT 16-DEC-2008, integrated into UniProtKB/TrEMBL. DT 16-DEC-2008, sequence version 1. DT 14-MAY-2014, entry version 10. DE SubName: Full=TraA; DE SubName: Full=TraA conjugal transfer protein; GN Name=traA; OS Klebsiella pneumoniae. OG Plasmid 9, and Plasmid pKPI-6. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Klebsiella. OX NCBI_TaxID=573; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=9; PLASMID=9; RX PubMed=19258268; DOI=10.1128/AAC.01355-08; RA Gootz T.D., Lescoe M.K., Dib-Hajj F., Dougherty B.A., He W., RA Della-Latta P., Huard R.C.; RT "Genetic organization of transposase regions surrounding blaKPC RT carbapenemase genes on plasmids from Klebsiella strains isolated in a RT New York City hospital."; RL Antimicrob. Agents Chemother. 53:1998-2004(2009). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=A26; PLASMID=pKPI-6; RX PubMed=22078906; DOI=10.1016/j.diagmicrobio.2011.09.019; RA Shigemoto N., Kuwahara R., Kayama S., Shimizu W., Onodera M., RA Yokozaki M., Hisatsune J., Kato F., Ohge H., Sugai M.; RT "Emergence in Japan of an imipenem-susceptible, meropenem-resistant RT Klebsiella pneumoniae carrying blaIMP-6."; RL Diagn. Microbiol. Infect. Dis. 72:109-112(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223607; ACI63172.1; -; Genomic_DNA. DR EMBL; AB616660; BAM29010.1; -; Genomic_DNA. DR RefSeq; YP_002286911.1; NC_011383.1. DR GeneID; 6993931; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 78 AA; 9314 MW; AAF5D48150B7D081 CRC64; MMIFMISASL FMIIHMWAIL VFVFLWIPSA ALTKYDDRMF RIMGLWLKTK FSNWFDSPFK QWGGSSYSSV DYKRKGLK // ID B6Y8Y4_9RICK Unreviewed; 98 AA. AC B6Y8Y4; DT 20-JAN-2009, integrated into UniProtKB/TrEMBL. DT 20-JAN-2009, sequence version 1. DT 19-MAR-2014, entry version 7. DE SubName: Full=Type IV secretion system protein VirB3, putative; GN ORFNames=C1A_187; OS Wolbachia endosymbiont of Culex quinquefasciatus JHB. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=569881; RN [1] RP NUCLEOTIDE SEQUENCE. RX PubMed=19114486; DOI=10.1128/JB.01731-08; RA Salzberg S.L., Puiu D., Sommer D.D., Nene V., Lee N.H.; RT "Genome sequence of the Wolbachia endosymbiont of Culex RT quinquefasciatus JHB."; RL J. Bacteriol. 191:1725-1725(2009). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ABZA01000003; EEB55597.1; -; Genomic_DNA. DR EnsemblBacteria; EEB55597; EEB55597; C1A_187. DR PATRIC; 25682103; VBIWolEnd42581_0243. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10967 MW; 78387A0B42E26374 CRC64; MSTGSIQTNQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INTNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIT // ID B7JAX6_ACIF2 Unreviewed; 125 AA. AC B7JAX6; DT 10-FEB-2009, integrated into UniProtKB/TrEMBL. DT 10-FEB-2009, sequence version 1. DT 14-MAY-2014, entry version 25. DE SubName: Full=Conjugal transfer protein TrbD, putative; GN OrderedLocusNames=AFE_1637; OS Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB OS 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)). OC Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; OC Acidithiobacillaceae; Acidithiobacillus. OX NCBI_TaxID=243159; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 23270 / DSM 14882 / NCIB 8455; RX PubMed=19077236; DOI=10.1186/1471-2164-9-597; RA Valdes J., Pedroso I., Quatrini R., Dodson R.J., Tettelin H., RA Blake R.II., Eisen J.A., Holmes D.S.; RT "Acidithiobacillus ferrooxidans metabolism: from genome sequence to RT industrial applications."; RL BMC Genomics 9:597-597(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001219; ACK77989.1; -; Genomic_DNA. DR RefSeq; YP_002426059.1; NC_011761.1. DR STRING; 243159.AFE_1637; -. DR EnsemblBacteria; ACK77989; ACK77989; AFE_1637. DR GeneID; 7134931; -. DR KEGG; afr:AFE_1637; -. DR PATRIC; 20654445; VBIAciFer29821_1494. DR eggNOG; proNOG22541; -. DR HOGENOM; HOG000072892; -. DR KO; K03198; -. DR OMA; QYKAPKE; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; AFER243159:GH3S-1633-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 125 AA; 13597 MW; FAF1CC60769D0F53 CRC64; MAAEHTRRLP LHPSLTKPML VAGGEREATF ALWFVCLSIP VLVSLWFIPV GLIVGGVGQS FLRTLAKHDP QSFGVVRRHW SQQSVYLGGA SAYAPVQYKA PKEQTQSAAS GGVLKALANL MRKNK // ID B7LJD0_ECOLU Unreviewed; 917 AA. AC B7LJD0; DT 10-FEB-2009, integrated into UniProtKB/TrEMBL. DT 10-FEB-2009, sequence version 1. DT 14-MAY-2014, entry version 28. DE SubName: Full=Putative Pilx3-4/VirB3-4 protein, putative conjugal transfer protein; GN OrderedLocusNames=p2ECUMN_0030; OS Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC). OG Plasmid p2ESCUM. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=585056; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=UMN026 / ExPEC; RX PubMed=19165319; DOI=10.1371/journal.pgen.1000344; RA Touchon M., Hoede C., Tenaillon O., Barbe V., Baeriswyl S., Bidet P., RA Bingen E., Bonacorsi S., Bouchier C., Bouvet O., Calteau A., RA Chiapello H., Clermont O., Cruveiller S., Danchin A., Diard M., RA Dossat C., Karoui M.E., Frapy E., Garry L., Ghigo J.M., Gilles A.M., RA Johnson J., Le Bouguenec C., Lescat M., Mangenot S., RA Martinez-Jehanne V., Matic I., Nassif X., Oztas S., Petit M.A., RA Pichon C., Rouy Z., Ruf C.S., Schneider D., Tourret J., Vacherie B., RA Vallenet D., Medigue C., Rocha E.P.C., Denamur E.; RT "Organised genome dynamics in the Escherichia coli species results in RT highly diverse adaptive paths."; RL PLoS Genet. 5:E1000344-E1000344(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CU928149; CAQ87548.1; -; Genomic_DNA. DR RefSeq; YP_002381212.1; NC_011739.1. DR GeneID; 7169442; -. DR KEGG; eum:p2ECUMN_0030; -. DR PATRIC; 18438868; VBIEscCol32010_0029. DR eggNOG; COG3451; -. DR HOGENOM; HOG000119263; -. DR KO; K03199; -. DR OMA; ESNRFVF; -. DR OrthoDB; EOG6HMX9P; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 917 AA; 104959 MW; E005E95196112CA1 CRC64; MSTLFKGLTR PALIRGLGVP LFPFLGMCII CVLLGVWIHE AMYALILPGW YAIRRVTQFD ERFFDLLYLR TLVKGHPLSN KRFSAVHYAG SQYDEVDISK VDNFMKLKDQ SSVEELIPYS SHITDNIIVT KNRDLLATWQ IDGAYFECVD SEDLSILTDQ LNTLIRSFEG KSVTLYPHRI RCKKGVRPVF NSKIPFVNRV MNDYYESFPQ SEFFENKLFL TICFKPFTTE DKVTHFFSRS KKQKDIFKEP VNEMNEICDR LNTYLSRFHS RRLGLYEDHG VVYSDQLSLF QYLLSGRWQK VRVSSSPFYT YLGGKDLFFG NDAGQITASD HARYFRCIEI KDYFQETDAG ILDALMYLPV EYVVTSSFTA MDKQSAIKAL DDQIDKLEMT DDAAKSLLAD LKVGLDMVSS GYISFGKSHQ TLVVFADSPE RLVKDTNIVT STLEDLGLIV TYSTLSLGAA YFAQLPGNYT LRPRLSTLSS LNFAEMESFH NFFSGKEKGN TWGEKLITLR GSGNDIYHLN YHMTTEHQNF FGKNPTLGHT EILGTSNVGK TVLLMTKAFA AQQFGTPESF PANRKLKKLT TVFFDKDRAG EVGIRAMGGS YYRVKEGEPT GWNPAALPPT KRNIAFMKDL VRLLCTLNSE PLDDYQNSLI SDAVERLMQR SDRSYPVSKL RPLIQEPDDT ETKRHGLKAR LKPWTQGEEF GWVFDNREDT FDVDNLDVFG IDGTEFLDNK VLASAASFYL IYRVTMLADG RRLLIYMDEF WQWINNEAFR DFVYNKLKTG RKLDMVLVVA TQSPDELIKS PIAAAVREQC ATHIYLANPK AKRSEYVDGL QVRELYFDKI KAIDPLSRQF LVVKNPQRKG ESDDFAAFAR LELGKAAYYL PVLSASKPQL ELFDEIWKEG MKPEEWLDTY LEQANLI // ID B7MWI4_ECO81 Unreviewed; 912 AA. AC B7MWI4; DT 10-FEB-2009, integrated into UniProtKB/TrEMBL. DT 10-FEB-2009, sequence version 1. DT 14-MAY-2014, entry version 32. DE SubName: Full=Putative type IV secretory pathway VirB4 component; GN OrderedLocusNames=ECED1_2263; OS Escherichia coli O81 (strain ED1a). OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=585397; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ED1a; RX PubMed=19165319; DOI=10.1371/journal.pgen.1000344; RA Touchon M., Hoede C., Tenaillon O., Barbe V., Baeriswyl S., Bidet P., RA Bingen E., Bonacorsi S., Bouchier C., Bouvet O., Calteau A., RA Chiapello H., Clermont O., Cruveiller S., Danchin A., Diard M., RA Dossat C., Karoui M.E., Frapy E., Garry L., Ghigo J.M., Gilles A.M., RA Johnson J., Le Bouguenec C., Lescat M., Mangenot S., RA Martinez-Jehanne V., Matic I., Nassif X., Oztas S., Petit M.A., RA Pichon C., Rouy Z., Ruf C.S., Schneider D., Tourret J., Vacherie B., RA Vallenet D., Medigue C., Rocha E.P.C., Denamur E.; RT "Organised genome dynamics in the Escherichia coli species results in RT highly diverse adaptive paths."; RL PLoS Genet. 5:E1000344-E1000344(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CU928162; CAR08450.2; -; Genomic_DNA. DR RefSeq; YP_002398202.1; NC_011745.1. DR STRING; 585397.ECED1_2263; -. DR EnsemblBacteria; CAR08450; CAR08450; ECED1_2263. DR GeneID; 7140019; -. DR KEGG; ecq:ECED1_2263; -. DR PATRIC; 38488578; VBIEscCol8292_2289. DR eggNOG; COG3451; -. DR HOGENOM; HOG000119263; -. DR KO; K03199; -. DR OMA; FIAMRAM; -. DR OrthoDB; EOG6HMX9P; -. DR BioCyc; ECOL585397:GJCU-2294-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 912 AA; 103068 MW; 618CD458613EA287 CRC64; MAKLLKAMKR PAALWGVPMV PLLAVTGVTI IVAIWTSVAL LFLLPVQFLV MKSLTRNEPM RFNLIAVWLR AKGKPVANRL FGATTFMPVE HDDVDIKEFL DAMKLNQCAT IKKYIPYSSH IHQHVVRSPK SDLYCTWELM GTPFDCESDE SLQFGTNQLH GLIRSFEGMP VTFYIHNDRN TFTDNLHKDS GNPYADEVSR LYYASVGLFR RNRLFLTVCY RPFVSLEKAE RKRMKDSQKL KELDGALLEM LEIKSTLDTA LSRYGARPLG TFTEGNAVFS SQLAFYEYLL THQWRKVRVT RTPAYDVMGA AALFFSAESG QINHANGTQY FRGLEVKEFA EETATGMMDS LLYAPCDYVI TQSYTCMSRE EAKKAIKRTR RLLMSADDDA VSQRLDLDVA LDLLTSGKIA YGKHHFSIMV YSPSLESLVA DTNEISNALN NIGITPVPAE ISLSAAYMAQ LPGNYNLRPR KGELSSQNFV ELAALHNFYP GKRDKAPWGD AMALLRTPSG DGYYINLHNT LADKDEFNEK NPASTCILGT NGSGKTMLMT FFEIMQQKYG REDSFSPDAK TKRLTTVYLD KDRGAEMNIR ALGGRYYRVI SGESTGWNPF SLPATKRNIN FIKQLMKILC TRNGSTISPR DERRLSDAVN AVMNDEPQYR VYGITRMLEN LPEPATKEAQ ENGLSIRLSQ WAQGGEFGWV FDNESDTFDI SNCDNFGIDG TEFLDDASVC APISFYLLYR ITSLLDGRRL VIFMDEFWKW LRDPVFKDFA YNKLKTIRKL NGMLVVGTQS PAEIIKDDIA PAVIEQCGTQ ILAANPNADR AHYVDGMKFE PEVFDVVKGL DPQARQYVVV KNQFKRGDTK RFAARVTLDL SGIGRYTKVM SGDAPNLEIF ESIYREGMQP HEWLDTYLAK AL // ID B7NBY5_ECOLU Unreviewed; 912 AA. AC B7NBY5; DT 10-FEB-2009, integrated into UniProtKB/TrEMBL. DT 10-FEB-2009, sequence version 1. DT 14-MAY-2014, entry version 30. DE SubName: Full=Putative type IV secretory pathway VirB4 component; GN OrderedLocusNames=ECUMN_2286; OS Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC). OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=585056; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=UMN026 / ExPEC; RX PubMed=19165319; DOI=10.1371/journal.pgen.1000344; RA Touchon M., Hoede C., Tenaillon O., Barbe V., Baeriswyl S., Bidet P., RA Bingen E., Bonacorsi S., Bouchier C., Bouvet O., Calteau A., RA Chiapello H., Clermont O., Cruveiller S., Danchin A., Diard M., RA Dossat C., Karoui M.E., Frapy E., Garry L., Ghigo J.M., Gilles A.M., RA Johnson J., Le Bouguenec C., Lescat M., Mangenot S., RA Martinez-Jehanne V., Matic I., Nassif X., Oztas S., Petit M.A., RA Pichon C., Rouy Z., Ruf C.S., Schneider D., Tourret J., Vacherie B., RA Vallenet D., Medigue C., Rocha E.P.C., Denamur E.; RT "Organised genome dynamics in the Escherichia coli species results in RT highly diverse adaptive paths."; RL PLoS Genet. 5:E1000344-E1000344(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CU928163; CAR13475.1; -; Genomic_DNA. DR RefSeq; YP_002413004.1; NC_011751.1. DR STRING; 585056.ECUMN_2286; -. DR EnsemblBacteria; CAR13475; CAR13475; ECUMN_2286. DR GeneID; 7155077; -. DR KEGG; eum:ECUMN_2286; -. DR PATRIC; 18443835; VBIEscCol32010_2474. DR eggNOG; COG3451; -. DR HOGENOM; HOG000119263; -. DR KO; K03199; -. DR OMA; FSEETAT; -. DR OrthoDB; EOG6HMX9P; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 912 AA; 103120 MW; 064B76C193106205 CRC64; MAKLLKAMKR PAALWGVPMV PLLAVTGVTI IVAVWTSVAL LFLLPVEFLV MKSLTRNEPM RFNLIAVWLR VKGKPVANRL FGATTLMPVE HEAVDIKEFL DAMKLNQCAT IKKYIPYSSH IHQHVVRSPK SDLYCTWELM GTPFDCESDE SLQFGTNQLH GLIHSFEGMP VTFYIHNDRN TFTDNLHKDS GNPYADEVSR LYYASVGVFR RNRLFLTVCY RPFVSLEKAE RKRMKDSQKL KELDGALLEM LEIKSTLDTA LSRYGARPLG TFTEGSAVFS SQLAFYEYLL THQWRKVRVT RTPAYDVMGA AALFFSAESG QINHANGTQY FRGLEVKEFS EETATGMMDS LLYAPCDYVI TQSYTCMSRE EAKKAIKRTR RLLMSADDDA VSQRLDLDVA LDLLTSGKIA YGKHHFSIMV YSPSLENLVA DTNEISNALN NIGITPVPAE ISLSAAYMAQ LPGNYNLRPR KGELSSQNFV ELAALHNFYP GKRDKAPWGD AMALLRTPSG DGYYINLHNT LADKDEFNEK NPASTCILGT NGSGKTMLMT FFEIMQQKYG REDSFSPDAK TKRLTTVYLD KDRGAEMNIR ALGGRYYRVI SGESTGWNPF SLPATKRNIN FIKQLMKILC TRNGSTIFPR DERRLSDAVN AVMNDEPQYR VYGITRMLEN LPEPATKEAQ ENGLSIRLSQ WAQGGEFGWV FDNESDTFDI SNCDNFGIDG TEFLDDASVC APISFYLLYR ITSLLDGRRL VIFMDEFWKW LRDPVFKDFA YNKLKTIRKL NGMLVVGTQS PAEIIKDDIA PAVIEQCGTQ ILAANPNADR AHYVDDMKFE PEVFDVVKGL DPQARQYVVV KNQFKRGDTK RFAARVTLDL SGIGRYTKVM SGDAPNLEIF ESIYREGMQP HEWLDTYLAK AL // ID B7WYQ9_COMTE Unreviewed; 90 AA. AC B7WYQ9; DT 03-MAR-2009, integrated into UniProtKB/TrEMBL. DT 03-MAR-2009, sequence version 1. DT 19-FEB-2014, entry version 9. DE SubName: Full=Putative conjugal transfer TrbD transmembrane protein; GN ORFNames=CtesDRAFT_PD2966; OS Comamonas testosteroni KF-1. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Comamonas. OX NCBI_TaxID=399795; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=KF-1; RX PubMed=15240283; DOI=10.1128/AEM.70.7.4053-4063.2004; RA Schleheck D., Knepper T.P., Fischer K., Cook A.M.; RT "Mineralization of individual congeners of linear RT alkylbenzenesulfonate by defined pairs of heterotrophic bacteria."; RL Appl. Environ. Microbiol. 70:4053-4063(2004). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=KF-1; RG US DOE Joint Genome Institute (JGI-PGF); RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K.M., Lowry S., RA Sun H., Larimer F., Land M.L., Hauser L., Kjelleberg S., Cook A., RA Knepper T.P., Fischer K., Schleheck D., Richardson P.; RL Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAUJ02000001; EED68020.1; -; Genomic_DNA. DR EnsemblBacteria; EED68020; EED68020; CtesDRAFT_PD2966. DR PATRIC; 29057355; VBIComTes39478_2927. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Membrane; Transmembrane. SQ SEQUENCE 90 AA; 9559 MW; FBDC3DF96AC161E9 CRC64; MSAPDTFAAG FEVPLHRSLT EPILLGGAPR TVAIANGTLA AAVGLGLQLW IPGVVLWIVG HSLAMRGARV DPQFMAVFAR HIKHRPLLDV // ID B8GSW3_THISH Unreviewed; 90 AA. AC B8GSW3; DT 03-MAR-2009, integrated into UniProtKB/TrEMBL. DT 03-MAR-2009, sequence version 1. DT 14-MAY-2014, entry version 24. DE SubName: Full=Putative conjugal transfer TrbD transmembrane protein; GN OrderedLocusNames=Tgr7_1897; OS Thioalkalivibrio sp. (strain HL-EbGR7). OC Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; OC Ectothiorhodospiraceae; Thioalkalivibrio. OX NCBI_TaxID=396588; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=HL-EbGR7; RX PubMed=21475584; RA Muyzer G., Sorokin D.Y., Mavromatis K., Lapidus A., Clum A., RA Ivanova N., Pati A., d'Haeseleer P., Woyke T., Kyrpides N.C.; RT "Complete genome sequence of 'Thioalkalivibrio sulfidophilus' HL- RT EbGr7."; RL Stand. Genomic Sci. 4:23-35(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001339; ACL72978.1; -; Genomic_DNA. DR RefSeq; YP_002513965.1; NC_011901.1. DR STRING; 396588.Tgr7_1897; -. DR EnsemblBacteria; ACL72978; ACL72978; Tgr7_1897. DR GeneID; 7315227; -. DR KEGG; tgr:Tgr7_1897; -. DR PATRIC; 23963310; VBIThiSp19295_1892. DR eggNOG; COG5268; -. DR KO; K03198; -. DR OMA; WAIGHIA; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; TSUL396588:GH5B-1925-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 90 AA; 9543 MW; 5890B9346CA761ED CRC64; MSGPDTFAAG FEVPLHRSLT EPILLGGAPR TVAIANGTLA AAVGLGLQLW IPGVVLWIVG HSLAVWGARV DPQFMAVFAR HIKHRPLLDV // ID B8GZH6_CAUCN Unreviewed; 94 AA. AC B8GZH6; DT 03-MAR-2009, integrated into UniProtKB/TrEMBL. DT 03-MAR-2009, sequence version 1. DT 14-MAY-2014, entry version 24. DE SubName: Full=Type IV secretory pathway, VirB3 protein; GN OrderedLocusNames=CCNA_02500; OS Caulobacter crescentus (strain NA1000 / CB15N). OC Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; OC Caulobacteraceae; Caulobacter. OX NCBI_TaxID=565050; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NA1000 / CB15N; RX PubMed=20472802; DOI=10.1128/JB.00255-10; RA Marks M.E., Castro-Rojas C.M., Teiling C., Du L., Kapatral V., RA Walunas T.L., Crosson S.; RT "The genetic basis of laboratory adaptation in Caulobacter RT crescentus."; RL J. Bacteriol. 192:3678-3688(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001340; ACL95965.1; -; Genomic_DNA. DR RefSeq; YP_002517873.1; NC_011916.1. DR STRING; 190650.CC_2418; -. DR EnsemblBacteria; ACL95965; ACL95965; CCNA_02500. DR GeneID; 7330652; -. DR KEGG; ccs:CCNA_02500; -. DR PATRIC; 21309549; VBICauCre52860_2454. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; CAULONA1000:CCNA_02500-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 94 AA; 10558 MW; 442EFC2FDB9F4F52 CRC64; MSGPGSDPVF AALTRPQMVA GVTYSYAVFN LIVTMEAFLI SKSFWALLIA PLVHAVGYLG CLNEPRFFDL WITKVSRCPN IRNRGFWQAN SYRP // ID B8JFP3_ANAD2 Unreviewed; 116 AA. AC B8JFP3; DT 03-MAR-2009, integrated into UniProtKB/TrEMBL. DT 03-MAR-2009, sequence version 1. DT 14-MAY-2014, entry version 19. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=A2cp1_1136; OS Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258). OC Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; OC Cystobacterineae; Myxococcaceae; Anaeromyxobacter. OX NCBI_TaxID=455488; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=2CP-1 / ATCC BAA-258; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., RA Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., RA Ovchinnikova G., Beliaev A.S., Richardson P.; RT "Complete sequence of Anaeromyxobacter dehalogenans 2CP-1."; RL Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001359; ACL64481.1; -; Genomic_DNA. DR RefSeq; YP_002491547.1; NC_011891.1. DR STRING; 455488.A2cp1_1136; -. DR EnsemblBacteria; ACL64481; ACL64481; A2cp1_1136. DR GeneID; 7296533; -. DR KEGG; acp:A2cp1_1136; -. DR PATRIC; 20909118; VBIAnaDeh28364_1160. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; ADEH455488:GH35-1142-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 116 AA; 12847 MW; FAF5B753DC689A50 CRC64; MAARFPLFKG ATRVPTVAGV PLIPAVVLVI TVASATVLLG FSWLALLAPG WLLMAQVTRT DDRAFRILWL WAQTKVANRL RLGARRGVHD LWGASAYATS DRRFRSWEGR SSRWAG // ID B9BFI7_9BURK Unreviewed; 94 AA. AC B9BFI7; DT 24-MAR-2009, integrated into UniProtKB/TrEMBL. DT 24-MAR-2009, sequence version 1. DT 03-APR-2013, entry version 5. DE SubName: Full=Putative mating pair formation protein; GN ORFNames=BURMUCGD1_6629; OS Burkholderia multivorans CGD1. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia; Burkholderia cepacia complex. OX NCBI_TaxID=513051; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=CGD1; RX PubMed=23105085; DOI=10.1128/JB.01306-12; RA Varga J.J., Losada L., Zelazny A.M., Brinkac L., Harkins D., RA Radune D., Hostetler J., Sampaio E.P., Ronning C.M., Nierman W.C., RA Greenberg D.E., Holland S.M., Goldberg J.B.; RT "Draft Genome Sequence Determination for Cystic Fibrosis and Chronic RT Granulomatous Disease Burkholderia multivorans Isolates."; RL J. Bacteriol. 194:6356-6357(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACFB01000017; EED97300.1; -; Genomic_DNA. DR EnsemblBacteria; EED97300; EED97300; BURMUCGD1_6629. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 94 AA; 10884 MW; EC090649C5793F1C CRC64; MEPEVTEIPV GLVQPWMLWH CLAELFLGSW LLPAVIFLFW RNLWVLLLIP VFLIASYLIT ARDKFALAVW YESAGSAVRS RALNYWNGTK TYVP // ID B9BUE2_9BURK Unreviewed; 89 AA. AC B9BUE2; DT 24-MAR-2009, integrated into UniProtKB/TrEMBL. DT 24-MAR-2009, sequence version 1. DT 03-APR-2013, entry version 7. DE SubName: Full=Conjugal transfer protein; GN ORFNames=BURMUCGD2_3682; OS Burkholderia multivorans CGD2. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia; Burkholderia cepacia complex. OX NCBI_TaxID=513052; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=CGD2; RX PubMed=23105085; DOI=10.1128/JB.01306-12; RA Varga J.J., Losada L., Zelazny A.M., Brinkac L., Harkins D., RA Radune D., Hostetler J., Sampaio E.P., Ronning C.M., Nierman W.C., RA Greenberg D.E., Holland S.M., Goldberg J.B.; RT "Draft Genome Sequence Determination for Cystic Fibrosis and Chronic RT Granulomatous Disease Burkholderia multivorans Isolates."; RL J. Bacteriol. 194:6356-6357(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACFC01000009; EEE05439.1; -; Genomic_DNA. DR EnsemblBacteria; EEE05439; EEE05439; BURMUCGD2_3682. DR PATRIC; 27792166; VBIBurMul91169_4008. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 89 AA; 9553 MW; A050A7761CB3E50A CRC64; MSTAHDLPGF EVPLHRSLTE PILMGGAPRT VAIANGTLSG AVGLGLQLWI PGIALWIVGH SLAVWGARVD PQFMQVFARH LKHKPLLDV // ID B9CEN3_9BURK Unreviewed; 89 AA. AC B9CEN3; DT 24-MAR-2009, integrated into UniProtKB/TrEMBL. DT 24-MAR-2009, sequence version 1. DT 03-APR-2013, entry version 6. DE SubName: Full=Conjugal transfer protein; GN ORFNames=BURMUCGD2M_3670; OS Burkholderia multivorans CGD2M. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia; Burkholderia cepacia complex. OX NCBI_TaxID=513053; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=CGD2M; RA Holland S.M., Harkins D.M., Brinkac L.M., Hostetler J., Nierman W.C.; RL Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACFD01000007; EEE11711.1; -; Genomic_DNA. DR EnsemblBacteria; EEE11711; EEE11711; BURMUCGD2M_3670. DR PATRIC; 27805634; VBIBurMul35808_4460. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 89 AA; 9553 MW; A050A7761CB3E50A CRC64; MSTAHDLPGF EVPLHRSLTE PILMGGAPRT VAIANGTLSG AVGLGLQLWI PGIALWIVGH SLAVWGARVD PQFMQVFARH LKHKPLLDV // ID B9JE69_AGRRK Unreviewed; 112 AA. AC B9JE69; DT 24-MAR-2009, integrated into UniProtKB/TrEMBL. DT 24-MAR-2009, sequence version 1. DT 14-MAY-2014, entry version 25. DE SubName: Full=Type IV secretion protein AvhB3; GN Name=avhB3; OrderedLocusNames=Arad_4792; OS Agrobacterium radiobacter (strain K84 / ATCC BAA-868). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=311403; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=K84 / ATCC BAA-868; RX PubMed=19251847; DOI=10.1128/JB.01779-08; RA Slater S.C., Goldman B.S., Goodner B., Setubal J.C., Farrand S.K., RA Nester E.W., Burr T.J., Banta L., Dickerman A.W., Paulsen I., RA Otten L., Suen G., Welch R., Almeida N.F., Arnold F., Burton O.T., RA Du Z., Ewing A., Godsy E., Heisel S., Houmiel K.L., Jhaveri J., Lu J., RA Miller N.M., Norton S., Chen Q., Phoolcharoen W., Ohlin V., RA Ondrusek D., Pride N., Stricklin S.L., Sun J., Wheeler C., Wilson L., RA Zhu H., Wood D.W.; RT "Genome sequences of three Agrobacterium biovars help elucidate the RT evolution of multichromosome genomes in bacteria."; RL J. Bacteriol. 191:2501-2511(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000628; ACM28415.1; -; Genomic_DNA. DR RefSeq; YP_002546348.1; NC_011985.1. DR STRING; 311403.Arad_4792; -. DR EnsemblBacteria; ACM28415; ACM28415; Arad_4792. DR GeneID; 7369660; -. DR KEGG; ara:Arad_4792; -. DR PATRIC; 20808356; VBIAgrRad129173_6244. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; HDHNMFR; -. DR OrthoDB; EOG6VMTNS; -. DR BioCyc; ARAD311403:GHU8-3727-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 112 AA; 12671 MW; 093E4EA8CA2959A0 CRC64; MVEKVSLEED TLFLACTRPA MIAGVTMEAM GVNIMLTTIL YIIAGSIAYG LVGVVFHFIF RSLVKHDHNM FRILIAWIET RGRSRNGTYW SGSSLTPLRL VRHYDERDLG HA // ID B9JPG7_AGRRK Unreviewed; 99 AA. AC B9JPG7; DT 24-MAR-2009, integrated into UniProtKB/TrEMBL. DT 24-MAR-2009, sequence version 1. DT 14-MAY-2014, entry version 28. DE SubName: Full=Conjugal transfer protein; GN Name=trbD; OrderedLocusNames=Arad_14178; OS Agrobacterium radiobacter (strain K84 / ATCC BAA-868). OG Plasmid pAtK84b. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=311403; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=K84 / ATCC BAA-868; PLASMID=pAtK84b; RX PubMed=19251847; DOI=10.1128/JB.01779-08; RA Slater S.C., Goldman B.S., Goodner B., Setubal J.C., Farrand S.K., RA Nester E.W., Burr T.J., Banta L., Dickerman A.W., Paulsen I., RA Otten L., Suen G., Welch R., Almeida N.F., Arnold F., Burton O.T., RA Du Z., Ewing A., Godsy E., Heisel S., Houmiel K.L., Jhaveri J., Lu J., RA Miller N.M., Norton S., Chen Q., Phoolcharoen W., Ohlin V., RA Ondrusek D., Pride N., Stricklin S.L., Sun J., Wheeler C., Wilson L., RA Zhu H., Wood D.W.; RT "Genome sequences of three Agrobacterium biovars help elucidate the RT evolution of multichromosome genomes in bacteria."; RL J. Bacteriol. 191:2501-2511(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000630; ACM31036.1; -; Genomic_DNA. DR RefSeq; YP_002551330.1; NC_011990.1. DR STRING; 311403.Arad_14178; -. DR EnsemblBacteria; ACM31036; ACM31036; Arad_14178. DR GeneID; 7381724; -. DR KEGG; ara:Arad_14178; -. DR PATRIC; 20809528; VBIAgrRad129173_6828. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; EREDCES; -. DR OrthoDB; EOG6N6849; -. DR BioCyc; ARAD311403:GHU8-6732-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 99 AA; 11258 MW; 98098371E16E5A78 CRC64; MAEPGSNLAR SRIHRALSRP NLLMGADREL VLLTGLAAVI LIFVVLTWYA ALFGLAIWLV AVAALRMMAK ADPLMRRVYL RHVSYRSIYR TTSTPWRKF // ID B9JPR9_AGRRK Unreviewed; 98 AA. AC B9JPR9; DT 24-MAR-2009, integrated into UniProtKB/TrEMBL. DT 24-MAR-2009, sequence version 1. DT 11-DEC-2013, entry version 24. DE SubName: Full=Type IV secretion protein; GN OrderedLocusNames=Arad_12063; OS Agrobacterium radiobacter (strain K84 / ATCC BAA-868). OG Plasmid pAtK84c. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=311403; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=K84 / ATCC BAA-868; PLASMID=pAtK84c; RX PubMed=19251847; DOI=10.1128/JB.01779-08; RA Slater S.C., Goldman B.S., Goodner B., Setubal J.C., Farrand S.K., RA Nester E.W., Burr T.J., Banta L., Dickerman A.W., Paulsen I., RA Otten L., Suen G., Welch R., Almeida N.F., Arnold F., Burton O.T., RA Du Z., Ewing A., Godsy E., Heisel S., Houmiel K.L., Jhaveri J., Lu J., RA Miller N.M., Norton S., Chen Q., Phoolcharoen W., Ohlin V., RA Ondrusek D., Pride N., Stricklin S.L., Sun J., Wheeler C., Wilson L., RA Zhu H., Wood D.W.; RT "Genome sequences of three Agrobacterium biovars help elucidate the RT evolution of multichromosome genomes in bacteria."; RL J. Bacteriol. 191:2501-2511(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000631; ACM31138.1; -; Genomic_DNA. DR RefSeq; YP_002546602.1; NC_011987.1. DR STRING; 311403.Arad_12063; -. DR EnsemblBacteria; ACM31138; ACM31138; Arad_12063. DR GeneID; 7379620; -. DR KEGG; ara:Arad_12063; -. DR PATRIC; 20808687; VBIAgrRad129173_6407. DR eggNOG; NOG148097; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; VPYMAVV; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; ARAD311403:GHU8-6284-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 98 AA; 11076 MW; F52468CDC77E9186 CRC64; MSEAQAKAEV APLVLGLTRP RMFWGVPIGL FVGELMIVVM TFLNTKNLAM FLLFLPLHAA AYVITVRDPH LPNVVRVRIA KCPWTKNRHF WGGNSYEP // ID B9K3B1_AGRVS Unreviewed; 99 AA. AC B9K3B1; DT 24-MAR-2009, integrated into UniProtKB/TrEMBL. DT 24-MAR-2009, sequence version 1. DT 14-MAY-2014, entry version 27. DE SubName: Full=Conjugal transfer protein; GN Name=trbD; OrderedLocusNames=Avi_9658; OS Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis OS (strain S4)). OG Plasmid pAtS4b. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium. OX NCBI_TaxID=311402; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=S4 / ATCC BAA-846; PLASMID=pAtS4b; RX PubMed=19251847; DOI=10.1128/JB.01779-08; RA Slater S.C., Goldman B.S., Goodner B., Setubal J.C., Farrand S.K., RA Nester E.W., Burr T.J., Banta L., Dickerman A.W., Paulsen I., RA Otten L., Suen G., Welch R., Almeida N.F., Arnold F., Burton O.T., RA Du Z., Ewing A., Godsy E., Heisel S., Houmiel K.L., Jhaveri J., Lu J., RA Miller N.M., Norton S., Chen Q., Phoolcharoen W., Ohlin V., RA Ondrusek D., Pride N., Stricklin S.L., Sun J., Wheeler C., Wilson L., RA Zhu H., Wood D.W.; RT "Genome sequences of three Agrobacterium biovars help elucidate the RT evolution of multichromosome genomes in bacteria."; RL J. Bacteriol. 191:2501-2511(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000635; ACM39359.1; -; Genomic_DNA. DR RefSeq; YP_002551485.1; NC_011991.1. DR STRING; 311402.Avi_9658; -. DR EnsemblBacteria; ACM39359; ACM39359; Avi_9658. DR GeneID; 7381871; -. DR KEGG; avi:Avi_9658; -. DR PATRIC; 20832441; VBIAgrVit37146_5857. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR OMA; TRAANFD; -. DR OrthoDB; EOG6FZ4KH; -. DR BioCyc; AVIT311402:GH2Y-5473-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 99 AA; 11343 MW; B2C71AD731F29886 CRC64; MAEGTSRLDR VRIHRALSRP ALLFGADREL VLMTGLTAVI LIFVVLTLVS AAVGFIIWIV VVGLLRMMAK ADPLMRQVYL RHMKYRSHYR PTSSPWRKH // ID B9K3U0_AGRVS Unreviewed; 99 AA. AC B9K3U0; DT 24-MAR-2009, integrated into UniProtKB/TrEMBL. DT 24-MAR-2009, sequence version 1. DT 14-MAY-2014, entry version 27. DE SubName: Full=Conjugal transfer protein; GN Name=trbD; OrderedLocusNames=Avi_9267; OS Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis OS (strain S4)). OG Plasmid pAtS4c. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium. OX NCBI_TaxID=311402; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=S4 / ATCC BAA-846; PLASMID=pAtS4c; RX PubMed=19251847; DOI=10.1128/JB.01779-08; RA Slater S.C., Goldman B.S., Goodner B., Setubal J.C., Farrand S.K., RA Nester E.W., Burr T.J., Banta L., Dickerman A.W., Paulsen I., RA Otten L., Suen G., Welch R., Almeida N.F., Arnold F., Burton O.T., RA Du Z., Ewing A., Godsy E., Heisel S., Houmiel K.L., Jhaveri J., Lu J., RA Miller N.M., Norton S., Chen Q., Phoolcharoen W., Ohlin V., RA Ondrusek D., Pride N., Stricklin S.L., Sun J., Wheeler C., Wilson L., RA Zhu H., Wood D.W.; RT "Genome sequences of three Agrobacterium biovars help elucidate the RT evolution of multichromosome genomes in bacteria."; RL J. Bacteriol. 191:2501-2511(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000636; ACM39538.1; -; Genomic_DNA. DR RefSeq; YP_002542723.1; NC_011984.1. DR STRING; 311402.Avi_9267; -. DR EnsemblBacteria; ACM39538; ACM39538; Avi_9267. DR GeneID; 7367863; -. DR KEGG; avi:Avi_9267; -. DR PATRIC; 20822641; VBIAgrVit37146_1025. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; LRMMAKS; -. DR OrthoDB; EOG6N6849; -. DR BioCyc; AVIT311402:GH2Y-5365-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 99 AA; 11256 MW; B52EEC5951738DD0 CRC64; MAEPGSNLSR SRVHRALSRP NLLMGADREL VLLTGLAAVI LIFVVLTWYA ALFGVAIWLI AVAALRMMAK ADPLMRRVYL RHVSYRSLYR PTSTPWRKF // ID B9K416_AGRVS Unreviewed; 108 AA. AC B9K416; DT 24-MAR-2009, integrated into UniProtKB/TrEMBL. DT 24-MAR-2009, sequence version 1. DT 14-MAY-2014, entry version 25. DE SubName: Full=VirB3; GN Name=virB3; OrderedLocusNames=Avi_8225; OS Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis OS (strain S4)). OG Plasmid pTiS4. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium. OX NCBI_TaxID=311402; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=S4 / ATCC BAA-846; PLASMID=pTiS4; RX PubMed=19251847; DOI=10.1128/JB.01779-08; RA Slater S.C., Goldman B.S., Goodner B., Setubal J.C., Farrand S.K., RA Nester E.W., Burr T.J., Banta L., Dickerman A.W., Paulsen I., RA Otten L., Suen G., Welch R., Almeida N.F., Arnold F., Burton O.T., RA Du Z., Ewing A., Godsy E., Heisel S., Houmiel K.L., Jhaveri J., Lu J., RA Miller N.M., Norton S., Chen Q., Phoolcharoen W., Ohlin V., RA Ondrusek D., Pride N., Stricklin S.L., Sun J., Wheeler C., Wilson L., RA Zhu H., Wood D.W.; RT "Genome sequences of three Agrobacterium biovars help elucidate the RT evolution of multichromosome genomes in bacteria."; RL J. Bacteriol. 191:2501-2511(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000637; ACM39670.1; -; Genomic_DNA. DR RefSeq; YP_002540110.1; NC_011982.1. DR STRING; 311402.Avi_8225; -. DR EnsemblBacteria; ACM39670; ACM39670; Avi_8225. DR GeneID; 7365115; -. DR KEGG; avi:Avi_8225; -. DR PATRIC; 20822078; VBIAgrVit37146_0744. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; RDYNAAS; -. DR OrthoDB; EOG6HJ293; -. DR BioCyc; AVIT311402:GH2Y-5085-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 108 AA; 11687 MW; A467CA58D7A98F14 CRC64; MIKDLEEATL YLAATRPALF FGVPLTLAGV FMMLAGFLIV IVQNPLYEIV LLPLWLGARL VVERDYNAAS VVLLFLQTAG RSVDGHTWGG ASVSPNPIRV ASRGRGMT // ID B9K488_AGRVS Unreviewed; 99 AA. AC B9K488; DT 24-MAR-2009, integrated into UniProtKB/TrEMBL. DT 24-MAR-2009, sequence version 1. DT 14-MAY-2014, entry version 26. DE SubName: Full=Conjugal transfer protein; GN Name=trbD; OrderedLocusNames=Avi_8332; OS Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis OS (strain S4)). OG Plasmid pTiS4. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium. OX NCBI_TaxID=311402; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=S4 / ATCC BAA-846; PLASMID=pTiS4; RX PubMed=19251847; DOI=10.1128/JB.01779-08; RA Slater S.C., Goldman B.S., Goodner B., Setubal J.C., Farrand S.K., RA Nester E.W., Burr T.J., Banta L., Dickerman A.W., Paulsen I., RA Otten L., Suen G., Welch R., Almeida N.F., Arnold F., Burton O.T., RA Du Z., Ewing A., Godsy E., Heisel S., Houmiel K.L., Jhaveri J., Lu J., RA Miller N.M., Norton S., Chen Q., Phoolcharoen W., Ohlin V., RA Ondrusek D., Pride N., Stricklin S.L., Sun J., Wheeler C., Wilson L., RA Zhu H., Wood D.W.; RT "Genome sequences of three Agrobacterium biovars help elucidate the RT evolution of multichromosome genomes in bacteria."; RL J. Bacteriol. 191:2501-2511(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000637; ACM39742.1; -; Genomic_DNA. DR RefSeq; YP_002540182.1; NC_011982.1. DR STRING; 311402.Avi_8332; -. DR EnsemblBacteria; ACM39742; ACM39742; Avi_8332. DR GeneID; 7365280; -. DR KEGG; avi:Avi_8332; -. DR PATRIC; 20822236; VBIAgrVit37146_0823. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; AKSDPYM; -. DR OrthoDB; EOG6N6849; -. DR BioCyc; AVIT311402:GH2Y-5168-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 99 AA; 11264 MW; B0AEB0E25060EA5C CRC64; MADAGSNLIR SRVHRALSRP NLLMGADREL VLLTALVAVI LIFVVLTWYA ALFGIAIWLV AVGALRMMAK ADPLMRRVYI RHISYKTFYR ATSSPWRKF // ID B9KGH4_CAMLR Unreviewed; 924 AA. AC B9KGH4; DT 24-MAR-2009, integrated into UniProtKB/TrEMBL. DT 24-MAR-2009, sequence version 1. DT 14-MAY-2014, entry version 29. DE SubName: Full=Secretion/conjugal transfer ATPase VirB3/4; GN OrderedLocusNames=Cla_a009; OS Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060). OG Plasmid megaplasmid pCL2100. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=306263; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=RM2100 / D67 / ATCC BAA-1060; PLASMID=megaplasmid pCL2100; RX PubMed=18713059; DOI=10.1089/fpd.2008.0101; RA Miller W.G., Wang G., Binnewies T.T., Parker C.T.; RT "The complete genome sequence and analysis of the human pathogen RT Campylobacter lari."; RL Foodborne Pathog. Dis. 5:371-386(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000933; ACM64881.1; -; Genomic_DNA. DR RefSeq; YP_002576133.1; NC_012040.1. DR ProteinModelPortal; B9KGH4; -. DR STRING; 306263.Cla_a009; -. DR EnsemblBacteria; ACM64881; ACM64881; Cla_a009. DR GeneID; 7409785; -. DR KEGG; cla:Cla_a009; -. DR PATRIC; 20063674; VBICamLar15090_1563. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119263; -. DR KO; K03199; -. DR OrthoDB; EOG6HMX9P; -. DR BioCyc; CLAR306263:GH7X-1580-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 924 AA; 107022 MW; 0484DBE0F452AB3D CRC64; MNNYFDPLFK GLTRPALLFG VPLVPFIINI LGFILIAVYT QQFFLLIFGV ISYFIMKAMT KKDEQMFRLF FLKTKFISNF LSRKYHKAKT FNSVSYKRLP TNNDFPKLSI FPLHAEPSLE KLIPYSSLLT DSIVITKEHM LISTFFIEGI EFECESDENL IFKKNLLNMM IMSFSNEPIA FYFHNVRFKL HEFLDSHFEN SFLKEIDEKY HKSFDKKSFQ QNSLYLTLVY KPLKSNIDLK TFNKLNYKSK AKEISNFVLK FQEYLGKLEA NIKDFKPKIL SVYKKNNIKY SEQLEFYNYL IGGKFNPVVV CDTPIYQYLT GTLKNIQFNH DMIQLNYNDD TKRFARIIEI KDYSNETFSG ILDSLMYLDV DYTITQTFVP LSKYDSKSAL NKQINQLISS EDDGVSQIEQ LNLALDNLIS NVISFGNYHF NICVFGDSID ECKKNTNKVI TSLNSLGFTS TLANIALPAS YFSQFPSNFA IRPRVHMISS LNFSSLVALH NFLMGKKEKN CWGDAVTILK TPNKQPYFLN FHKSDGKNKD EFGDLNLANT LILGQSGGGK TVFMNFIINQ MIKYANKDSF PANIPEDKKK FTAVFLDKDK GALGNILCAG GRYISIKNGK PTGFNPFMVE TNEENLRFLK QLIKLCVTRN GEILNTKEEK QINEAVNTLM FQFEISERKY PISLLLENIT DDFNDNNSLK SRLSLFQKGK QFGWVFDNEY DNLDFPDDIN LFGIDGTEFL DEKDVSALIS YFILWRVMNL ADGRRLCIDI DEAWKWLEND IVAEEVKNKF KTIRKQNGFL RLATQSIEDF LKLKIANTLV EQSATKIFLP NPLAKEDEYL RLGLSKDEFL IVKNFAPHKR QFLVKRQDEA VVCSLDLSSL GKENLKILST GTSYIEKIEN IFNQENKTLE EKINELKTFY KEEQ // ID B9KIY8_ANAMF Unreviewed; 105 AA. AC B9KIY8; DT 24-MAR-2009, integrated into UniProtKB/TrEMBL. DT 24-MAR-2009, sequence version 1. DT 14-MAY-2014, entry version 19. DE SubName: Full=VirB3; GN Name=virB3; OrderedLocusNames=AMF_607; OS Anaplasma marginale (strain Florida). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Anaplasma. OX NCBI_TaxID=320483; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Florida; RX PubMed=19134224; DOI=10.1186/1471-2164-10-16; RA Dark M.J., Herndon D.R., Kappmeyer L.S., Gonzales M.P., Nordeen E., RA Palmer G.H., Knowles D.P.Jr., Brayton K.A.; RT "Conservation in the face of diversity: multistrain analysis of an RT intracellular bacterium."; RL BMC Genomics 10:16-16(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001079; ACM49450.1; -; Genomic_DNA. DR RefSeq; YP_002563706.1; NC_012026.1. DR STRING; 320483.AMF_607; -. DR EnsemblBacteria; ACM49450; ACM49450; AMF_607. DR GeneID; 7398048; -. DR KEGG; amf:AMF_607; -. DR PATRIC; 20945134; VBIAnaMar82315_0700. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; AMAR320483:GIWE-584-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 105 AA; 11799 MW; B9ED9DA863AA3C83 CRC64; MPVFGGVMSS GSVKTDQLFK GLTRPTMLFG VSYTFAILNF MISIMLFMYS NDFRVLLVLA PGMHAIGFAA SAKDPLFMDL FVIKMQKCSK CLNRFYHNAN SYDVM // ID B9MH78_ACIET Unreviewed; 90 AA. AC B9MH78; DT 24-MAR-2009, integrated into UniProtKB/TrEMBL. DT 24-MAR-2009, sequence version 1. DT 14-MAY-2014, entry version 27. DE SubName: Full=Putative conjugal transfer TrbD transmembrane protein; GN OrderedLocusNames=Dtpsy_1318; OS Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Acidovorax. OX NCBI_TaxID=535289; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=TPSY; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., RA Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., RA Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., RA Mikhailova N., Coates J.D.; RT "Complete sequence of Diaphorobacter sp. TPSY."; RL Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001392; ACM32783.1; -; Genomic_DNA. DR RefSeq; YP_002552783.1; NC_011992.1. DR STRING; 535289.Dtpsy_1318; -. DR EnsemblBacteria; ACM32783; ACM32783; Dtpsy_1318. DR GeneID; 7382407; -. DR KEGG; dia:Dtpsy_1318; -. DR PATRIC; 21779715; VBIDiaSp55748_1349. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR OMA; AVWATKR; -. DR OrthoDB; EOG6N6849; -. DR BioCyc; AEBR535289:GHOO-1342-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 90 AA; 9635 MW; E426C5A628CAAB4B CRC64; MSAPDTFAAG FEVPLRRSLT EPILLGGAPR TVAIANGTLA ATVGLGLQLW IPGVVLWIVG HSLAVWGARV DPQFMQVFAR HIKHKPLLDV // ID B9MIJ1_ACIET Unreviewed; 90 AA. AC B9MIJ1; DT 24-MAR-2009, integrated into UniProtKB/TrEMBL. DT 24-MAR-2009, sequence version 1. DT 14-MAY-2014, entry version 26. DE SubName: Full=Putative conjugal transfer TrbD transmembrane protein; GN OrderedLocusNames=Dtpsy_3504; OS Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Acidovorax. OX NCBI_TaxID=535289; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=TPSY; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., RA Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., RA Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., RA Mikhailova N., Coates J.D.; RT "Complete sequence of Diaphorobacter sp. TPSY."; RL Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001392; ACM34929.1; -; Genomic_DNA. DR RefSeq; YP_002554929.1; NC_011992.1. DR STRING; 535289.Dtpsy_3504; -. DR EnsemblBacteria; ACM34929; ACM34929; Dtpsy_3504. DR GeneID; 7382038; -. DR KEGG; dia:Dtpsy_3504; -. DR PATRIC; 21784199; VBIDiaSp55748_3554. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; PGLVLWI; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; AEBR535289:GHOO-3569-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 90 AA; 9575 MW; 588A089F6CA761ED CRC64; MSGPDTFAAG FEVPLHRSLT EPILLGGAPR TVAIANGTLA AAVGLGLQLW IPGVVLWIVG HSLAMWGARV DPQFMAVFAR HIKHRPLLDV // ID B9NXT5_9RHOB Unreviewed; 92 AA. AC B9NXT5; DT 24-MAR-2009, integrated into UniProtKB/TrEMBL. DT 24-MAR-2009, sequence version 1. DT 03-APR-2013, entry version 6. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=RKLH11_4281; OS Rhodobacteraceae bacterium KLH11. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae. OX NCBI_TaxID=467661; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=KLH11; RA Hill R., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G., RA Rogers Y.-H., Friedman R., Frazier M., Venter J.C.; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS999534; EEE35109.1; -; Genomic_DNA. DR EnsemblBacteria; EEE35109; EEE35109; RKLH11_4281. DR PATRIC; 28451903; VBIRhoBac95025_4101. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 92 AA; 10348 MW; 45FA45CBE9C58CAD CRC64; MARSSKLYRG LSRSAEWGGL PALYLIVIAG ATSAAIYWLG VTPAIVTGFV FYTALRLFYE WEPAFFRILF VTLSRTPRTP NRKHHGGDFY SA // ID B9QRE7_9RHOB Unreviewed; 77 AA. AC B9QRE7; DT 24-MAR-2009, integrated into UniProtKB/TrEMBL. DT 24-MAR-2009, sequence version 1. DT 03-APR-2013, entry version 7. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=SADFL11_22; OS Labrenzia alexandrii DFL-11. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Labrenzia. OX NCBI_TaxID=244592; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DFL-11; RA Wagner-Dobler I., Ferriera S., Johnson J., Kravitz S., Beeson K., RA Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.; RL Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EQ973119; EEE48128.1; -; Genomic_DNA. DR EnsemblBacteria; EEE48128; EEE48128; SADFL11_22. DR PATRIC; 30172770; VBILabAle118631_0034. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 77 AA; 8804 MW; ACD9BA2D9708DDF8 CRC64; MFGADRELVL VTGLASVILI FVILKPYAAV LGVAIWIVVV GVLRMMAKVD PLMRAVYLRH VKYCTYYRPT STPWRKY // ID C0F8D5_9RICK Unreviewed; 98 AA. AC C0F8D5; DT 05-MAY-2009, integrated into UniProtKB/TrEMBL. DT 05-MAY-2009, sequence version 1. DT 19-MAR-2014, entry version 8. DE SubName: Full=Type IV secretion system protein VirB3; GN Name=virB3; ORFNames=WUni_000990; OS Wolbachia endosymbiont of Muscidifurax uniraptor. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=77037; RN [1] RP NUCLEOTIDE SEQUENCE. RX PubMed=19307581; DOI=10.1073/pnas.0810753106; RA Klasson L., Westberg J., Sapountzis P., Naslund K., Lutnaes Y., RA Darby A.C., Veneti Z., Chen L., Braig H.R., Garrett R., Bourtzis K., RA Andersson S.G.; RT "The mosaic genome structure of the Wolbachia wRi strain infecting RT Drosophila simulans."; RL Proc. Natl. Acad. Sci. U.S.A. 106:5725-5730(2009). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACFP01000057; EEH12521.1; -; Genomic_DNA. DR EnsemblBacteria; EEH12521; EEH12521; WUni_000990. DR PATRIC; 25690954; VBIWolEnd74720_0050. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10942 MW; 1342D243F61C69DB CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INSNDLRVIL LMLPGMHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIA // ID C0G926_9RHIZ Unreviewed; 128 AA. AC C0G926; DT 05-MAY-2009, integrated into UniProtKB/TrEMBL. DT 05-MAY-2009, sequence version 1. DT 03-APR-2013, entry version 5. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=BCETI_6000380; OS Brucella ceti str. Cudo. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=595497; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Cudo; RA Setubal J.C., Boyle S., Crasta O.R., Gillespie J.J., Kenyon R.W., RA Lu J., Mane S., Nagrani S., Shallom J.M., Shallom S., Shukla M., RA Snyder E.E., Sobral B.W., Wattam A.R., Will R., Williams K., Yoo H., RA Bruce D.H., Detter C., Munk C., Brettin T.S., Ficht T.; RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACJD01000006; EEH13440.1; -; Genomic_DNA. DR EnsemblBacteria; EEH13440; EEH13440; BCETI_6000380. DR PATRIC; 35213351; VBIBruCet28239_2443. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 128 AA; 14325 MW; 3ACAC4A8D323E77D CRC64; MPLTCLGKGT QIMTTAPQES NARSAGYRGD PIFKGCTRPA MLFGVPVIPL VIVGGSIVLL SVWISMFILP LIVPIVLVMR QITQTDDQMF RLLGLKAQFR LIHFNRTGRF WRASAYSPIA FTKRKRES // ID C0MPL2_BORPT Unreviewed; 104 AA. AC C0MPL2; DT 05-MAY-2009, integrated into UniProtKB/TrEMBL. DT 05-MAY-2009, sequence version 1. DT 11-DEC-2013, entry version 13. DE SubName: Full=Putative uncharacterized protein; OS Bordetella pertussis. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Alcaligenaceae; Bordetella. OX NCBI_TaxID=520; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=B1831, B1834, and B1920; RA Mooi F.R., van Loo I.H.M., van Gent M., He Q., Bart M.J., RA Heuvelman K.J., de Greeff S.C., Diavatopoulos D., Teunis P., RA Nagelkerke N., Mertsola J.; RT "Bordetella pertussis Strains with Increased Toxin Production RT Associated with Pertussis Resurgence."; RL Emerg. Infect. Dis. 15:1206-1213(2009). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=B1917; RX PubMed=19751581; DOI=10.3201/eid1508.081511; RA Mooi F.R., van Loo I.H.M., van Gent M., He Q., Bart M.J., RA Heuvelman K.J., de Greeff S.C., Diavatopoulos D., Teunis P., RA Nagelkerke N., Mertsola J.; RT "Bordetella pertussis strains with increased toxin production RT associated with pertussis resurgence."; RL Emerg. Infect. Dis. 15:1206-1213(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FN252333; CAX52282.1; -; Genomic_DNA. DR EMBL; FN252334; CAX52291.1; -; Genomic_DNA. DR EMBL; FN252335; CAX52300.1; -; Genomic_DNA. DR EMBL; FN252336; CAX52309.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 104 AA; 12312 MW; 581DD0CA8173B4B4 CRC64; MRDPLFKGCT RPAMLMGVPA TPLAVCSGTI ALLGIWFSIA FLALFPVALL AMRIMIRRDD QQFRLIWLYL RMRWLSRDRT HAFWQSTVYA PLRYAERRRR LRKP // ID C0R3S1_WOLWR Unreviewed; 98 AA. AC C0R3S1; DT 05-MAY-2009, integrated into UniProtKB/TrEMBL. DT 05-MAY-2009, sequence version 1. DT 14-MAY-2014, entry version 27. DE SubName: Full=Type IV secretion system protein VirB3; GN Name=virB3; OrderedLocusNames=WRi_008240; OS Wolbachia sp. subsp. Drosophila simulans (strain wRi). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=66084; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=wRi; RX PubMed=19307581; DOI=10.1073/pnas.0810753106; RA Klasson L., Westberg J., Sapountzis P., Naslund K., Lutnaes Y., RA Darby A.C., Veneti Z., Chen L., Braig H.R., Garrett R., Bourtzis K., RA Andersson S.G.; RT "The mosaic genome structure of the Wolbachia wRi strain infecting RT Drosophila simulans."; RL Proc. Natl. Acad. Sci. U.S.A. 106:5725-5730(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001391; ACN95563.1; -; Genomic_DNA. DR RefSeq; YP_002727354.1; NC_012416.1. DR STRING; 66084.WRi_008240; -. DR EnsemblBacteria; ACN95563; ACN95563; WRi_008240. DR GeneID; 7669551; -. DR KEGG; wri:WRi_008240; -. DR PATRIC; 24035869; VBIWolSp98304_0936. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; WSP66084:GHAN-776-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 98 AA; 10924 MW; 1342D706E24869DB CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INSNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIA // ID C0RK19_BRUMB Unreviewed; 116 AA. AC C0RK19; DT 05-MAY-2009, integrated into UniProtKB/TrEMBL. DT 05-MAY-2009, sequence version 1. DT 14-MAY-2014, entry version 21. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=BMEA_B0071; OS Brucella melitensis biotype 2 (strain ATCC 23457). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=546272; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 23457; RA Setubal J.C., Boyle S., Crasta O.R., Gillespie J.J., Kenyon R.W., RA Lu J., Mane S., Nagrani S., Shallom J.M., Shallom S., Shukla M., RA Snyder E.E., Sobral B.W., Wattam A.R., Will R., Williams K., Yoo H., RA Munk C., Tapia R., Han C., Detter J.C., Bruce D., Brettin T.S.; RT "Brucella melitensis ATCC 23457 whole genome shotgun sequencing RT project."; RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001489; ACO01952.1; -; Genomic_DNA. DR RefSeq; YP_002733906.1; NC_012442.1. DR ProteinModelPortal; C0RK19; -. DR STRING; 546272.BMEA_B0071; -. DR EnsemblBacteria; ACO01952; ACO01952; BMEA_B0071. DR GeneID; 7670593; -. DR KEGG; bmi:BMEA_B0071; -. DR PATRIC; 17840454; VBIBruMel14466_2336. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; FWGASSY; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BMEL546272:GJOX-2255-MONOMER; -. DR PRO; PR:C0RK19; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID C1DR59_AZOVD Unreviewed; 94 AA. AC C1DR59; DT 26-MAY-2009, integrated into UniProtKB/TrEMBL. DT 26-MAY-2009, sequence version 1. DT 14-MAY-2014, entry version 24. DE SubName: Full=P-type conjugative transfer protein TrbD; GN Name=trbD; OrderedLocusNames=Avin_35700; OS Azotobacter vinelandii (strain DJ / ATCC BAA-1303). OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Azotobacter. OX NCBI_TaxID=322710; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DJ / ATCC BAA-1303; RX PubMed=19429624; DOI=10.1128/JB.00504-09; RA Setubal J.C., dos Santos P., Goldman B.S., Ertesvag H., Espin G., RA Rubio L.M., Valla S., Almeida N.F., Balasubramanian D., Cromes L., RA Curatti L., Du Z., Godsy E., Goodner B., Hellner-Burris K., RA Hernandez J.A., Houmiel K., Imperial J., Kennedy C., Larson T.J., RA Latreille P., Ligon L.S., Lu J., Maerk M., Miller N.M., Norton S., RA O'Carroll I.P., Paulsen I., Raulfs E.C., Roemer R., Rosser J., RA Segura D., Slater S., Stricklin S.L., Studholme D.J., Sun J., RA Viana C.J., Wallin E., Wang B., Wheeler C., Zhu H., Dean D.R., RA Dixon R., Wood D.; RT "Genome sequence of Azotobacter vinelandii, an obligate aerobe RT specialized to support diverse anaerobic metabolic processes."; RL J. Bacteriol. 191:4534-4545(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001157; ACO79717.1; -; Genomic_DNA. DR RefSeq; YP_002800692.1; NC_012560.1. DR STRING; 322710.Avin_35700; -. DR EnsemblBacteria; ACO79717; ACO79717; Avin_35700. DR GeneID; 7762464; -. DR KEGG; avn:Avin_35700; -. DR PATRIC; 21033226; VBIAzoVin72790_3358. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; WAIGHIA; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; AVIN322710:GJ0M-3577-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 94 AA; 9938 MW; B7C9FBE3EA4FBFD0 CRC64; MSAANEGAPG FAPGFEIPLH RSLTEPILLG GAPRTVAIAN GTLAAAVGLG LQLWIPGVVL WIVGHSLAVW GARVDPQFMQ VFARHIKHRP LLDV // ID C1F4R2_ACIC5 Unreviewed; 99 AA. AC C1F4R2; DT 26-MAY-2009, integrated into UniProtKB/TrEMBL. DT 26-MAY-2009, sequence version 1. DT 16-APR-2014, entry version 16. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=ACP_1183; OS Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670). OC Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; OC Acidobacterium. OX NCBI_TaxID=240015; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 51196 / DSM 11244 / JCM 7670; RX PubMed=19201974; DOI=10.1128/AEM.02294-08; RA Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., RA Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., RA Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., RA Creasy T., Daugherty S.C., Davidsen T.M., DeBoy R.T., Detter J.C., RA Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., RA Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., RA Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., RA Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., RA Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R.; RT "Three genomes from the phylum Acidobacteria provide insight into the RT lifestyles of these microorganisms in soils."; RL Appl. Environ. Microbiol. 75:2046-2056(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001472; ACO32719.1; -; Genomic_DNA. DR RefSeq; YP_002754281.1; NC_012483.1. DR STRING; 240015.ACP_1183; -. DR EnsemblBacteria; ACO32719; ACO32719; ACP_1183. DR GeneID; 7699983; -. DR KEGG; aca:ACP_1183; -. DR PATRIC; 20665705; VBIAciCap40988_1144. DR BioCyc; ACAP240015:GKF4-1158-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 99 AA; 11328 MW; C806A00C1FDD2F77 CRC64; MQANTTNRRR NRVYKSLHKP LTYLGVERTL FFLVCVTAVG AFNLFNSLLA GIAVFAGGFA FGHWVTNMDP AFLRILARSE RYKTRYDPAK HTIPHVEVR // ID C1F577_ACIC5 Unreviewed; 87 AA. AC C1F577; DT 26-MAY-2009, integrated into UniProtKB/TrEMBL. DT 26-MAY-2009, sequence version 1. DT 14-MAY-2014, entry version 18. DE SubName: Full=Transporter, type IV (Conjugal DNA-protein transfer or VirB) secretory pathway (IVSP) family; GN OrderedLocusNames=ACP_3166; OS Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670). OC Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; OC Acidobacterium. OX NCBI_TaxID=240015; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 51196 / DSM 11244 / JCM 7670; RX PubMed=19201974; DOI=10.1128/AEM.02294-08; RA Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., RA Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., RA Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., RA Creasy T., Daugherty S.C., Davidsen T.M., DeBoy R.T., Detter J.C., RA Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., RA Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., RA Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., RA Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., RA Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R.; RT "Three genomes from the phylum Acidobacteria provide insight into the RT lifestyles of these microorganisms in soils."; RL Appl. Environ. Microbiol. 75:2046-2056(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001472; ACO31864.1; -; Genomic_DNA. DR RefSeq; YP_002756172.1; NC_012483.1. DR STRING; 240015.ACP_3166; -. DR EnsemblBacteria; ACO31864; ACO31864; ACP_3166. DR GeneID; 7698682; -. DR KEGG; aca:ACP_3166; -. DR PATRIC; 20669547; VBIAciCap40988_3031. DR HOGENOM; HOG000100485; -. DR BioCyc; ACAP240015:GKF4-3111-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 87 AA; 9921 MW; 53DD98619B4DD8E8 CRC64; MTRRGEQLPI NQALNRPRAK LGLDLSAWMA IVFVCVTVFL VGFRLVAMIA FPTLAAGAWL IVRKHPKMFE LWGLSLSQKS YYDPRKD // ID C1F5S8_ACIC5 Unreviewed; 87 AA. AC C1F5S8; DT 26-MAY-2009, integrated into UniProtKB/TrEMBL. DT 26-MAY-2009, sequence version 1. DT 14-MAY-2014, entry version 18. DE SubName: Full=Transporter, type IV (Conjugal DNA-protein transfer or VirB) secretory pathway (IVSP) family; GN OrderedLocusNames=ACP_3262; OS Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670). OC Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; OC Acidobacterium. OX NCBI_TaxID=240015; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 51196 / DSM 11244 / JCM 7670; RX PubMed=19201974; DOI=10.1128/AEM.02294-08; RA Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., RA Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., RA Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., RA Creasy T., Daugherty S.C., Davidsen T.M., DeBoy R.T., Detter J.C., RA Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., RA Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., RA Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., RA Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., RA Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R.; RT "Three genomes from the phylum Acidobacteria provide insight into the RT lifestyles of these microorganisms in soils."; RL Appl. Environ. Microbiol. 75:2046-2056(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001472; ACO34330.1; -; Genomic_DNA. DR RefSeq; YP_002756263.1; NC_012483.1. DR STRING; 240015.ACP_3262; -. DR EnsemblBacteria; ACO34330; ACO34330; ACP_3262. DR GeneID; 7699513; -. DR KEGG; aca:ACP_3262; -. DR PATRIC; 20669725; VBIAciCap40988_3120. DR HOGENOM; HOG000100485; -. DR BioCyc; ACAP240015:GKF4-3209-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 87 AA; 9956 MW; 7552F97A54E90AA8 CRC64; MTRRGEPLPI NQALNRPRAK LGLDLSAWMT ILFVCVAVFL VGFRLVALLA FPTLAVSAWL IVRKHPKMFQ LWGLSLSQKS YYDPRKQ // ID C1MEW5_9ENTR Unreviewed; 90 AA. AC C1MEW5; DT 26-MAY-2009, integrated into UniProtKB/TrEMBL. DT 26-MAY-2009, sequence version 1. DT 13-NOV-2013, entry version 10. DE SubName: Full=Uncharacterized protein; GN ORFNames=CSAG_04203; OS Citrobacter sp. 30_2. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Citrobacter. OX NCBI_TaxID=469595; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=30_2; RG The Broad Institute Genome Sequencing Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Ambrose C., Strauss J., RA Allen-Vercoe E., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., RA Haas B., Abouelleil A., Alvarado L., Arachchi H.M., Berlin A., RA Brown A., Chapman S.B., Chen Z., Dunbar C., Freedman E., Gearin G., RA Goldberg J., Griggs A., Gujja S., Heiman D., Howarth C., Larson L., RA Lui A., MacDonald P.J.P., Montmayeur A., Murphy C., Neiman D., RA Pearson M., Priest M., Roberts A., Saif S., Shea T., Shenoy N., RA Sisk P., Stolte C., Sykes S., Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Citrobacter sp. 30_2."; RL Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACDJ02000016; EEH95849.1; -; Genomic_DNA. DR EnsemblBacteria; EEH95849; EEH95849; CSAG_04203. DR PATRIC; 27103702; VBICitSp98337_3980. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 90 AA; 9529 MW; 5F97CE3469A231B8 CRC64; MSGPDSFAAG FEVPLHRSLT EPILLGGAPR TVAIANGTLA AAVGLGLQLW IPGVVLWIVG HSLAVWGARV DPQFMAVFAR HIKHRPLLDV // ID C3KFT9_PSEFL Unreviewed; 97 AA. AC C3KFT9; DT 16-JUN-2009, integrated into UniProtKB/TrEMBL. DT 16-JUN-2009, sequence version 1. DT 14-MAY-2014, entry version 7. DE SubName: Full=Type IV secretion VirB3-like protein; GN Name=mpfB; OS Pseudomonas fluorescens. OG Plasmid pNAH20. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. OX NCBI_TaxID=294; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=PC20; PLASMID=pNAH20; RX PubMed=10719200; DOI=10.1111/j.1574-6941.2000.tb00684.x; RA Heinaru E., Truu J., Stottmeister U., Heinaru A.; RT "Three types of phenol and p-cresol catabolism in phenol- and p- RT cresol-degrading bacteria isolated from river water continuously RT polluted with phenolic compounds."; RL FEMS Microbiol. Ecol. 31:195-205(2000). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=PC20; PLASMID=pNAH20; RA Heinaru E., Vedler E., Jutkina J., Lehiste M., Heinaru A.; RT "Conjugal transfer and mobilization capacity of the completely RT sequenced naphthalene plasmid pNAH20 from multiplasmid strain RT Pseudomonas fluorescens PC20."; RL Submitted (MAY-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AY887963; ACQ63557.1; -; Genomic_DNA. DR RefSeq; YP_002887490.1; NC_012674.1. DR GeneID; 7871558; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 97 AA; 10850 MW; 4F3BA949339DD437 CRC64; MAEQDPDEGE VLVVAMARPS MVGPFTLSSI LISLITPVLA ALLLRSLYVL VTMPILFAAA YWICSKDVYL FGVLRAAFKL RASRLRKLWG YRSYAPR // ID C3KQX2_RHISN Unreviewed; 112 AA. AC C3KQX2; DT 16-JUN-2009, integrated into UniProtKB/TrEMBL. DT 16-JUN-2009, sequence version 1. DT 14-MAY-2014, entry version 26. DE SubName: Full=VirB3 type IV secretion protein; GN Name=virB3; OrderedLocusNames=NGR_b10270; OS Rhizobium sp. (strain NGR234). OG Plasmid sym pNGR234b. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. OX NCBI_TaxID=394; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NGR234; RX PubMed=14702322; DOI=10.1128/JB.186.2.535-542.2004; RA Streit W.R., Schmitz R.A., Perret X., Staehelin C., Deakin W.J., RA Raasch C., Liesegang H., Broughton W.J.; RT "An evolutionary hot spot: the pNGR234b replicon of Rhizobium sp. RT strain NGR234."; RL J. Bacteriol. 186:535-542(2004). RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NGR234; RX PubMed=19376903; DOI=10.1128/AEM.00515-09; RA Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., RA Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roser A., RA Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., RA Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.; RT "Rhizobium sp. strain NGR234 possesses a remarkable number of RT secretion systems."; RL Appl. Environ. Microbiol. 75:4035-4045(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000874; ACP22480.1; -; Genomic_DNA. DR RefSeq; YP_002823233.1; NC_012586.1. DR STRING; 394.NGR_b10270; -. DR EnsemblBacteria; ACP22480; ACP22480; NGR_b10270. DR GeneID; 7788766; -. DR KEGG; rhi:NGR_b10270; -. DR PATRIC; 32303602; VBIRhiSp122450_1435. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; HDHNMFR; -. DR OrthoDB; EOG6VMTNS; -. DR BioCyc; SFRE394:GBYN-4721-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 112 AA; 12326 MW; 688D892DDCB4D8CB CRC64; MAPEISLEED TLFLACTRPA MVAGVTMEAM GVNLMATTLL FIVAGSIAYA LVGVVLHFCF RSLVKHDHNM FRIVAAWTET RGRTRNGVAW GGSTVTPLKL VRRYDERDLG LV // ID C3PME1_RICAE Unreviewed; 95 AA. AC C3PME1; DT 16-JUN-2009, integrated into UniProtKB/TrEMBL. DT 16-JUN-2009, sequence version 1. DT 14-MAY-2014, entry version 23. DE SubName: Full=VirB3; GN Name=virB3; OrderedLocusNames=RAF_ORF0128; OS Rickettsia africae (strain ESF-5). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=347255; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ESF-5; RX PubMed=19379498; DOI=10.1186/1471-2164-10-166; RA Fournier P.E., El Karkouri K., Leroy Q., Robert C., Giumelli B., RA Renesto P., Socolovschi C., Parola P., Audic S., Raoult D.; RT "Analysis of the Rickettsia africae genome reveals that virulence RT acquisition in Rickettsia species may be explained by genome RT reduction."; RL BMC Genomics 10:166-166(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001612; ACP53101.1; -; Genomic_DNA. DR RefSeq; YP_002844844.1; NC_012633.1. DR STRING; 347255.RAF_ORF0128; -. DR EnsemblBacteria; ACP53101; ACP53101; RAF_ORF0128. DR GeneID; 7815380; -. DR KEGG; raf:RAF_ORF0128; -. DR PATRIC; 17872014; VBIRicAfr6986_0153. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; RAFR347255:GJCT-123-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10750 MW; 7253E0673CBA777C CRC64; MAGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID C3QJR2_9BACE Unreviewed; 98 AA. AC C3QJR2; DT 16-JUN-2009, integrated into UniProtKB/TrEMBL. DT 16-JUN-2009, sequence version 1. DT 18-SEP-2013, entry version 8. DE SubName: Full=Uncharacterized protein; GN ORFNames=BSAG_03910; OS Bacteroides sp. D1. OC Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; OC Bacteroides. OX NCBI_TaxID=556258; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=D1; RG The Broad Institute Genome Sequencing Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Strauss J., Sibley C., RA White A., Allen-Vercoe E., Young S.K., Zeng Q., Gargeya S., RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M., RA Berlin A., Brown A., Chapman S.B., Chen Z., Dunbar C., Freedman E., RA Gearin G., Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., RA Howarth C., Larson L., Lui A., MacDonald P.J.P., Mehta T., RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Bacteroides sp. D1."; RL Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACAB02000057; EEO52196.1; -; Genomic_DNA. DR EnsemblBacteria; EEO52196; EEO52196; BSAG_03910. DR PATRIC; 30552100; VBIBacSp27461_3827. PE 4: Predicted; SQ SEQUENCE 98 AA; 11036 MW; B18F7EC3843A9493 CRC64; MNGKEEHYPD YPLFKGLQRP LEFMGIQGRY IYWAAATIGI AIVGFIIAYC MAGFVLALIV LSVTVTSGVG LILFKQRKGL HSKRLERGVF IYAYSKKM // ID C3WQ26_FUSNV Unreviewed; 88 AA. AC C3WQ26; DT 16-JUN-2009, integrated into UniProtKB/TrEMBL. DT 16-JUN-2009, sequence version 1. DT 18-SEP-2013, entry version 6. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=FSCG_01017; OS Fusobacterium nucleatum subsp. vincentii 4_1_13. OC Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; OC Fusobacterium. OX NCBI_TaxID=469606; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=4_1_13; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Allen-Vercoe E., RA Strauss J., Ambrose C., Lander E., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Fusobacterium sp. 4_1_13."; RL Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG657999; EEO40304.1; -; Genomic_DNA. DR EnsemblBacteria; EEO40304; EEO40304; FSCG_01017. DR PATRIC; 30297428; VBIFusSp49854_0513. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 88 AA; 10167 MW; DEACF94C4660364D CRC64; MEEDIEELAV PVCQGLIKPL TIAGVSREAM ILNVGVGTGF VIAVRAWYML PFFFLTHYLL YIACKKDPMV IKIFIKKYIR QKNYFYEG // ID C3WQT9_FUSNV Unreviewed; 95 AA. AC C3WQT9; DT 16-JUN-2009, integrated into UniProtKB/TrEMBL. DT 16-JUN-2009, sequence version 1. DT 18-SEP-2013, entry version 6. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=FSCG_01280; OS Fusobacterium nucleatum subsp. vincentii 4_1_13. OC Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; OC Fusobacterium. OX NCBI_TaxID=469606; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=4_1_13; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Allen-Vercoe E., RA Strauss J., Ambrose C., Lander E., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Fusobacterium sp. 4_1_13."; RL Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG657999; EEO40567.1; -; Genomic_DNA. DR EnsemblBacteria; EEO40567; EEO40567; FSCG_01280. DR PATRIC; 30297966; VBIFusSp49854_0782. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 95 AA; 11181 MW; 4EB081627CE053A7 CRC64; MSNQVNEKNE HINFKIPIYQ SLTKDIMIAG IPLTFALLLF AGMFFSMMIL HNLIFFLIFL VIYFLLFLII KLSKKFDSKI LDILARISLK PYIDY // ID C3WRM6_FUSNV Unreviewed; 97 AA. AC C3WRM6; DT 16-JUN-2009, integrated into UniProtKB/TrEMBL. DT 16-JUN-2009, sequence version 1. DT 18-SEP-2013, entry version 6. DE SubName: Full=Uncharacterized protein; GN ORFNames=FSCG_00028; OS Fusobacterium nucleatum subsp. vincentii 4_1_13. OC Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; OC Fusobacterium. OX NCBI_TaxID=469606; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=4_1_13; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Allen-Vercoe E., RA Strauss J., Ambrose C., Lander E., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Fusobacterium sp. 4_1_13."; RL Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG657999; EEO39315.1; -; Genomic_DNA. DR EnsemblBacteria; EEO39315; EEO39315; FSCG_00028. DR PATRIC; 30295412; VBIFusSp49854_0028. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 97 AA; 11377 MW; 39ACA95835918E5F CRC64; MLHRKGVEKM EEELDGFQVP VCQGLVKPIT ILGISREAMI LNVATAAIFV LSLRLYYLFW VFFITHYLLF RACKKDPEVI NIFLKKYIRQ LDYYGEG // ID C3WX75_FUSNU Unreviewed; 88 AA. AC C3WX75; DT 16-JUN-2009, integrated into UniProtKB/TrEMBL. DT 16-JUN-2009, sequence version 1. DT 16-APR-2014, entry version 7. DE SubName: Full=Uncharacterized protein; GN ORFNames=FSDG_01151; OS Fusobacterium nucleatum subsp. animalis 7_1. OC Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; OC Fusobacterium. OX NCBI_TaxID=457405; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=7_1; RG The Broad Institute Genome Sequencing Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Strauss J., Ambrose C.E., RA Allen-Vercoe E., Walker B., Young S.K., Zeng Q., Gargeya S., RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M., RA Berlin A.M., Chapman S.B., Goldberg J., Griggs A., Gujja S., RA Hansen M., Howarth C., Imamovic A., Larimer J., McCowen C., RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., RA Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J., RA Nusbaum C., Birren B.; RT "The Genome Sequence of Fusobacterium sp. 7_1."; RL Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP007062; EEO42592.1; -; Genomic_DNA. DR EnsemblBacteria; EEO42592; EEO42592; FSDG_01151. DR PATRIC; 30302157; VBIFusSp38687_0990. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 88 AA; 10297 MW; 430E7EB70002BEBD CRC64; MEEELDGFQV PVCQGLVKPI TILGISREAM ILNVATAAIF VLSLRLYYLF WVFFITHYLL FRACKKDPEV INIFLKKYIR QLDYYGEG // ID C3WYD6_FUSNU Unreviewed; 86 AA. AC C3WYD6; DT 16-JUN-2009, integrated into UniProtKB/TrEMBL. DT 16-JUN-2009, sequence version 1. DT 16-APR-2014, entry version 7. DE SubName: Full=Uncharacterized protein; GN ORFNames=FSDG_01451; OS Fusobacterium nucleatum subsp. animalis 7_1. OC Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; OC Fusobacterium. OX NCBI_TaxID=457405; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=7_1; RG The Broad Institute Genome Sequencing Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Strauss J., Ambrose C.E., RA Allen-Vercoe E., Walker B., Young S.K., Zeng Q., Gargeya S., RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M., RA Berlin A.M., Chapman S.B., Goldberg J., Griggs A., Gujja S., RA Hansen M., Howarth C., Imamovic A., Larimer J., McCowen C., RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., RA Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J., RA Nusbaum C., Birren B.; RT "The Genome Sequence of Fusobacterium sp. 7_1."; RL Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP007062; EEO42892.1; -; Genomic_DNA. DR EnsemblBacteria; EEO42892; EEO42892; FSDG_01451. DR PATRIC; 30302802; VBIFusSp38687_1471. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 86 AA; 9970 MW; DEA3D07395176B4E CRC64; MNDNYKIPVP KFLVKELTFW GLPYNLAVLM GGVMVLSAIV LKSIPIFIIF FIIYISLVIL IKVNPKFDPK IVEIISKMTF KKYINY // ID C3XP71_9HELI Unreviewed; 922 AA. AC C3XP71; DT 16-JUN-2009, integrated into UniProtKB/TrEMBL. DT 16-JUN-2009, sequence version 1. DT 16-APR-2014, entry version 10. DE SubName: Full=Type IV secretion/conjugal transfer ATPase, VirB4 family; GN ORFNames=HWAG_01602; OS Helicobacter winghamensis ATCC BAA-430. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Helicobacteraceae; Helicobacter. OX NCBI_TaxID=556267; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC BAA-430; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Fox J.G., Shen Z., RA Charoenlap N., Schauer D.B., Lander E., Galagan J., Nusbaum C., RA Birren B.; RT "The Genome Sequence of Helicobacter winghamensis ATCC BAA-430."; RL Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG661978; EEO26810.1; -; Genomic_DNA. DR EnsemblBacteria; EEO26810; EEO26810; HWAG_01602. DR PATRIC; 27530127; VBIHelWin108846_1674. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 922 AA; 106247 MW; 20F2FAA9D6D1523F CRC64; MQKNPLFKGL TRPPMIFGVP MTPLVIAMGG ILLLAFYSQN IFLIAFAIPV FFIMKAMTKR DDFIFRLMFL KMRFFSNPAS KNYYKVKTYS TNSYRQMPKN SNFPKISVFG LNAEPSFEKL IPFSSLISDS VVITKDYFLM TTWEVGGISF EAEEDDELDM KNDLLNMLFK SFANEPVSFY FHNCRYSIED KLTSKFNNAF LEEIDKKYYE SFKQGTLRKN SLYLTLIFNP LKIKIEKTTF LKSSFESKRK AISLFLIKFS EFTDRLEANI KDFNPKRLKT YLKDDKTYSK QLEFYNYLLG GKINPVRVLK APIHQYLNGN LQNIQFGHET IQINSNDGVK RFARCIEIKD YTNETFSGIL DILMYLDIEY IITQSFSPIP RIDAKSAISR QKKQLIATED DGFSQVEQID EALDQLTNGE ISFGKYHFSI LVYGDSLKEC KDNANQVITK MNELGFAVTL ANIALSATFF SQLPSNFAIR PRINLISSLN YSSLIALHNF SMGKRDKNCW GDAVSILKTP NKQPYYFNFH QNSGVNKNDF GELFLANTLI LGQSGGGKTV FMNFIVNQML KYANKDTFPD DIPQENRKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVEST QENIRQLQTL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEREERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEFDN LDFPDEINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENDIV QEEVKNKFKT IRKQNGFLRL ATQSVEDFLK LKNATTLIEQ SATMVFLPNP KAKEEEYVKG IGLSYDEYMI IKGFKPSKRQ FLIKRQDEKV ICTLDLSSLG NENLKILSTG TAHIDTIEKI FAQNHKSLDE KVAELKEFYR NS // ID C4GHE3_9NEIS Unreviewed; 149 AA. AC C4GHE3; DT 07-JUL-2009, integrated into UniProtKB/TrEMBL. DT 07-JUL-2009, sequence version 1. DT 18-SEP-2013, entry version 7. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=GCWU000324_00276; OS Kingella oralis ATCC 51147. OC Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; OC Neisseriaceae; Kingella. OX NCBI_TaxID=629741; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 51147; RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., RA Courtney L., Fronick C., Harrison M., Strong C., Farmer C., RA Delahaunty K., Markovic C., Hall O., Minx P., Tomlinson C., RA Mitreva M., Nelson J., Hou S., Wollam A., Pepin K.H., Johnson M., RA Bhonagiri V., Nash W.E., Warren W., Chinwalla A., Mardis E.R., RA Wilson R.K.; RL Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACJW02000002; EEP68381.1; -; Genomic_DNA. DR EnsemblBacteria; EEP68381; EEP68381; GCWU000324_00276. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 149 AA; 17196 MW; B95C677DD77325A8 CRC64; MKTMPDYQED IHTEYPTYNG MNRPAMLAGA PLMPLIICFF ILMFIGMIAQ QFIGSSALLI VGLILPIYFG LKTISENDDQ AIRIYALEAK WLLRRILSGA RLGTFTLHAG KYGRHREDYE NYQRLLEQNT QSNGKLRRLH AKNLPTRYQ // ID C4IU74_BRUAO Unreviewed; 128 AA. AC C4IU74; DT 07-JUL-2009, integrated into UniProtKB/TrEMBL. DT 07-JUL-2009, sequence version 1. DT 03-APR-2013, entry version 6. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=BAAA_7000070; OS Brucella abortus str. 2308 A. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=641140; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=2308 A; RA Setubal J.C., Boyle S., Crasta O.R., Gillespie J.J., Kenyon R.W., RA Lu J., Mane S., Nagrani S., Shallom J.M., Shallom S., Shukla M., RA Snyder E.E., Sobral B.W., Wattam A.R., Will R., Williams K., Yoo H., RA Munk C., Tapia R., Green L., Rogers Y., Detter J.C., Bruce D., RA Brettin T.S.; RL Submitted (MAY-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACOR01000007; EEP61617.1; -; Genomic_DNA. DR EnsemblBacteria; EEP61617; EEP61617; BAAA_7000070. DR PATRIC; 35206043; VBIBruAbo135566_2346. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 128 AA; 14325 MW; 3ACAC4A8D323E77D CRC64; MPLTCLGKGT QIMTTAPQES NARSAGYRGD PIFKGCTRPA MLFGVPVIPL VIVGGSIVLL SVWISMFILP LIVPIVLVMR QITQTDDQMF RLLGLKAQFR LIHFNRTGRF WRASAYSPIA FTKRKRES // ID C4K1C1_RICPU Unreviewed; 95 AA. AC C4K1C1; DT 07-JUL-2009, integrated into UniProtKB/TrEMBL. DT 07-JUL-2009, sequence version 1. DT 14-MAY-2014, entry version 23. DE SubName: Full=Type IV secretion system protein VirB3; GN OrderedLocusNames=RPR_02820; OS Rickettsia peacockii (strain Rustic). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=562019; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Rustic; RX PubMed=20027221; DOI=10.1371/journal.pone.0008361; RA Felsheim R.F., Kurtti T.J., Munderloh U.G.; RT "Genome sequence of the endosymbiont Rickettsia peacockii and RT comparison with virulent Rickettsia rickettsii: identification of RT virulence factors."; RL PLoS ONE 4:E8361-E8361(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001227; ACR47372.1; -; Genomic_DNA. DR RefSeq; YP_002916420.1; NC_012730.1. DR STRING; 562019.RPR_02820; -. DR EnsemblBacteria; ACR47372; ACR47372; RPR_02820. DR GeneID; 7942858; -. DR KEGG; rpk:RPR_02820; -. DR PATRIC; 17898659; VBIRicPea48268_0551. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; RPEA562019:GJD7-370-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10750 MW; 7253E0673CBA777C CRC64; MAGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID C4KSG4_BURPE Unreviewed; 89 AA. AC C4KSG4; DT 07-JUL-2009, integrated into UniProtKB/TrEMBL. DT 07-JUL-2009, sequence version 1. DT 14-MAY-2014, entry version 19. DE SubName: Full=Conjugal transfer protein; GN ORFNames=GBP346_A0972; OS Burkholderia pseudomallei MSHR346. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia; pseudomallei group. OX NCBI_TaxID=536230; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MSHR346; RA Harkins D.M., Brinkac L.M., Rogers Y.C., Detter J.C., Munk A.C., RA Bruce D.C., Keim P., Sims D.R., Brettin T.S.; RL Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001408; ACQ99064.1; -; Genomic_DNA. DR RefSeq; YP_002895696.1; NC_012695.1. DR STRING; 536230.GBP346_A0972; -. DR EnsemblBacteria; ACQ99064; ACQ99064; GBP346_A0972. DR GeneID; 7887785; -. DR KEGG; bpr:GBP346_A0972; -. DR PATRIC; 32571126; VBIBurPse130472_0902. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; BPSE536230:GHVQ-971-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 89 AA; 9408 MW; 2C13463541DEDFFA CRC64; MSTAGDLPGF EVPLHRALTE PILLGGAPRT VAITNGTLAA AVGLGLQMWV PGLVLWVAGH SLAVWGARVD PQFLPVFARH LKHKPLLDV // ID C4WLA6_9RHIZ Unreviewed; 113 AA. AC C4WLA6; DT 28-JUL-2009, integrated into UniProtKB/TrEMBL. DT 28-JUL-2009, sequence version 1. DT 03-APR-2013, entry version 6. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN ORFNames=OINT_2000050; OS Ochrobactrum intermedium LMG 3301. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Ochrobactrum. OX NCBI_TaxID=641118; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=LMG 3301; RA Setubal J.C., Boyle S., Crasta O.R., Gillespie J.J., Kenyon R.W., RA Lu J., Mane S., Nagrani S., Shallom J.M., Shallom S., Shukla M., RA Snyder E.E., Sobral B.W., Wattam A.R., Will R., Williams K., Yoo H., RA Munk C., Tapia R., Green L., Rogers Y., Detter J.C., Bruce D., RA Brettin T.S., Tsolis R.; RL Submitted (MAY-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACQA01000002; EEQ92928.1; -; Genomic_DNA. DR EnsemblBacteria; EEQ92928; EEQ92928; OINT_2000050. DR PATRIC; 28509541; VBIOchInt64846_2632. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 113 AA; 12537 MW; 176EFBE0F148C308 CRC64; MSISKPVLEE DTLFIACTRP AMFAGVTMEA MGMNVIATTI FYLAAGSVVY ALVGVVFHCI FRALVRHDHN MFRIAVAWVE TRGRSRNTSL WGGGSITPLR LSRRFDERDL GLA // ID C4XAQ6_KLEPN Unreviewed; 912 AA. AC C4XAQ6; DT 28-JUL-2009, integrated into UniProtKB/TrEMBL. DT 28-JUL-2009, sequence version 1. DT 14-MAY-2014, entry version 21. DE SubName: Full=Type IV secretory pathway VirB3-4 component; GN Name=virB3-4; ORFNames=KP1_3628; OS Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Klebsiella. OX NCBI_TaxID=484021; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NTUH-K2044; RA Wu K.M., Tsai S.F.; RL Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NTUH-K2044; RX PubMed=19447910; DOI=10.1128/JB.00315-09; RA Wu K.-M., Li L.-H., Yan J.-J., Tsao N., Liao T.-L., Tsai H.-C., RA Fung C.-P., Chen H.-J., Liu Y.-M., Wang J.-T., Fang C.-T., RA Chang S.-C., Shu H.-Y., Liu T.-T., Chen Y.-T., Shiau Y.-R., RA Lauderdale T.-L., Su I.-J., Kirby R., Tsai S.-F.; RT "Genome sequencing and comparative analysis of Klebsiella pneumoniae RT NTUH-K2044, a strain causing liver abscess and meningitis."; RL J. Bacteriol. 191:4492-4501(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP006725; BAH64214.1; -; Genomic_DNA. DR RefSeq; YP_002920281.1; NC_012731.1. DR ProteinModelPortal; C4XAQ6; -. DR EnsemblBacteria; BAH64214; BAH64214; KP1_3628. DR GeneID; 7948864; -. DR KEGG; kpu:KP1_3628; -. DR PATRIC; 20450747; VBIKlePne21779_3173. DR eggNOG; COG3451; -. DR KO; K03199; -. DR BioCyc; KPNE484021:GCWL-3376-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 912 AA; 102965 MW; FBED93BA5CDFEFEF CRC64; MAKLLKAMKR PAALWGVPMV PLLAVTGVTI IVAVWTSVAL LFLLPVEFLV MKSLTRNEPM RFNLIAVWLR VKGKPVANRL FGATTLMPVE HEAVDIKEFI DAMKLNQCAT IKKYIPYSSH IHQHVVRSPK SDLYCTWELM GTPFDCESDE SLQFGTNQLH GLIHSFEGMP VTFYIHNDRN TFTDNLHKDS GNPYADEVSR LYYASVGVFR RNRLFLTVCY RPFVSLEKAE RKRMKDSQKL KELDGALLEM LEIKSTLDTA LSRYGARPLG TFTEGSAVFS SQLAFYEYLL THQWRKVRVT RTPAYDVMGA AALFFSAESG QINHANGTQY FRGLEVKEFS EETATGMMDS LLYAPCDYVI TQSYTCMSRE EAKKAIKRTR RLLMSADDDA VSQRLDLDVA LDLLASGKIA YGKHHFSIMV YSPSLESLVA DTNEISNALN NIGITPVPAE ISLSAAYMAQ LPGNYNLRPR KGELSSQNFV ELAALHNFYP GKRDKAPWGD AMALLRTPSG DGYYINLHNT LADKDEFNEK NPASTCILGT NGSGKTMLMT FFEIMQQKYG REDSFSPDAK TKRLTTVYLD KDRGAEMNIR ALGGRYYRVI SGESTGWNPF SLPATKRNIN FIKQLMKILC TRNGSTISPR DERRLSDAVN AVMNDEPQYR VYGITRMLEN LPEPATKEAQ ENGLSIRLSQ WAQGGEFGWV FDNESDTFDI SNCDNFGIDG TEFLDDASVC APISFYLLYR ITSLLDGRRL VIFMDEFWKW LRDPVFKDFA YNKLKTIRKL NGMLVVGTQS PAEIIKDDIA PAVIEQCGTQ ILAANPNADR AHYVDGMKFE LEVFDVVKGL DPQSRQYVVV KNQFKRGDTK RFAARITLDL SGIGRHTKVM SGDAPNLEIF ESIYREGMQP HEWLDTYLAK AL // ID C4YYS4_9RICK Unreviewed; 95 AA. AC C4YYS4; DT 28-JUL-2009, integrated into UniProtKB/TrEMBL. DT 28-JUL-2009, sequence version 1. DT 22-JAN-2014, entry version 8. DE SubName: Full=Channel protein; GN ORFNames=REIS_0598; OS Rickettsia endosymbiont of Ixodes scapularis. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=444612; RN [1] RP NUCLEOTIDE SEQUENCE. RA Joardar V., Hostetler J., Durkin A.S., Gillespie J.J., Williams K.P., RA Daugherty S., Sakamoto J., Shukla M., Ferriera S., Shetty J., RA Schobel S., Steiner S.C., Sobral B.W.S., Hill C.A., Nene V., Caler E.; RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM000770; EER21454.1; -; Genomic_DNA. DR EnsemblBacteria; EER21454; EER21454; REIS_0598. DR PATRIC; 17810676; VBIRicEnd40569_0627. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10718 MW; B383E06051635FDE CRC64; MAGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFV AAALHLVAYI ICFKEPRFIE LYLNKISRTS QCPNKFYYGA NSYNI // ID C5D060_VARPS Unreviewed; 122 AA. AC C5D060; DT 28-JUL-2009, integrated into UniProtKB/TrEMBL. DT 28-JUL-2009, sequence version 1. DT 13-NOV-2013, entry version 19. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Vapar_5815; OS Variovorax paradoxus (strain S110). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Variovorax. OX NCBI_TaxID=543728; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=S110; RX PubMed=21183664; DOI=10.1128/JB.00925-10; RA Han J.I., Choi H.K., Lee S.W., Orwin P.M., Kim J., Laroe S.L., RA Kim T.G., O'Neil J., Leadbetter J.R., Lee S.Y., Hur C.G., Spain J.C., RA Ovchinnikova G., Goodwin L., Han C.; RT "Complete genome sequence of the metabolically versatile plant growth- RT promoting endophyte, Variovorax paradoxus S110."; RL J. Bacteriol. 193:1183-1190(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001636; ACS22404.1; -; Genomic_DNA. DR RefSeq; YP_002947670.1; NC_012792.1. DR STRING; 543728.Vapar_5815; -. DR EnsemblBacteria; ACS22404; ACS22404; Vapar_5815. DR GeneID; 7974936; -. DR KEGG; vap:Vapar_5815; -. DR PATRIC; 24012114; VBIVarPar36677_5818. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; VPAR543728:GHLL-5872-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 122 AA; 14007 MW; 057F9113D27992A2 CRC64; MSRNQGIAAN PLFVGMTRPS MVWGVTYSAM MFNIVVTTES FIVTKSLAWL LAFVPIHGVL YLVCLYEPRF FDLLQLWGRT RLPAMLGGNL RFWRANSYSP LALDMPDWRG HRRMRTPPVT LV // ID C5F2J0_9HELI Unreviewed; 95 AA. AC C5F2J0; DT 28-JUL-2009, integrated into UniProtKB/TrEMBL. DT 28-JUL-2009, sequence version 1. DT 18-SEP-2013, entry version 8. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=HPMG_01941; OS Helicobacter pullorum MIT 98-5489. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Helicobacteraceae; Helicobacter. OX NCBI_TaxID=537972; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MIT 98-5489; RG The Broad Institute Genome Sequencing Platform; RA Fox J.G., Shen Z., Charoenlap N., Schauer D.B., Ward D., Mehta T., RA Young S., Jaffe D., Gnerre S., Berlin A., Heiman D., Hepburn T., RA Shea T., Sykes S., Alvarado L., Kodira C., Borodovsky M., Lander E., RA Galagan J., Nusbaum C., Birren B.; RT "Annotation of Helicobacter pullorum strain MIT 98-5489."; RL Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS990448; EEQ64484.1; -; Genomic_DNA. DR EnsemblBacteria; EEQ64484; EEQ64484; HPMG_01941. DR PATRIC; 27519279; VBIHelPul71015_1955. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 95 AA; 10856 MW; A6067037D6080B82 CRC64; MEELQKIDIY SALNKPNLIF GADRELMLIT GLISFALIFT GATLITSVIG IALFFVCGLL LRLMAKSDPL MRQIFIRQNK YKKFYYPQST PFSKD // ID C5NND9_PHODP Unreviewed; 103 AA. AC C5NND9; DT 01-SEP-2009, integrated into UniProtKB/TrEMBL. DT 01-SEP-2009, sequence version 1. DT 14-MAY-2014, entry version 11. DE SubName: Full=TrbD mating pair formation protein; GN Name=TrbD; OS Photobacterium damsela subsp. piscicida (Pasteurella piscicida). OG Plasmid pP9014. OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; OC Vibrionaceae; Photobacterium. OX NCBI_TaxID=38294; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=P9014; PLASMID=pP9014; RA del Castillo C.S., Jang H.B., Hikima J., Jung T.S., Morii H., RA Hirano I., Kondo H., Kurosaka C., Aoki T.; RT "Comparative analysis and distribution of pP9014, a novel drug RT resistance IncP-1 plasmid from Photobacterium damselae subsp. RT piscicida."; RL Int. J. Antimicrob. Agents 42:10-18(2013). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AB453229; BAH83607.1; -; Genomic_DNA. DR RefSeq; YP_003023956.1; NC_012919.1. DR GeneID; 8130852; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11812 MW; 12BC6B21DA174B5A CRC64; MALRTIPIRR AGNRANLFMG GDRELVMFSG LLAAALIFSA QEIRATVFGI CLWWGALFVC RLMAKSDPKL RHVYLRHRIY KAYYPARSTP FRENTSGQGK QYK // ID C5TJS4_NEIFL Unreviewed; 66 AA. AC C5TJS4; DT 01-SEP-2009, integrated into UniProtKB/TrEMBL. DT 01-SEP-2009, sequence version 1. DT 18-SEP-2013, entry version 5. DE SubName: Full=Uncharacterized protein; GN ORFNames=NEIFL0001_1046; OS Neisseria flavescens SK114. OC Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; OC Neisseriaceae; Neisseria. OX NCBI_TaxID=596320; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=SK114; RA Shrivastava S., Sebastian Y., Madupu R., Durkin A.S., Torralba M., RA Methe B., Sutton G.G., Strausberg R.L., Nelson K.E.; RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACQV01000009; EER57286.1; -; Genomic_DNA. DR EnsemblBacteria; EER57286; EER57286; NEIFL0001_1046. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 66 AA; 8250 MW; 1918E33C6466FE1A CRC64; MYFNLFFLLT IPFIILIMRQ MAKRDDMIFR FLGLRLKFRL KARNREEFPD TWCFSPNEYR NNPPKQ // ID C6AAG9_BARGA Unreviewed; 107 AA. AC C6AAG9; DT 01-SEP-2009, integrated into UniProtKB/TrEMBL. DT 01-SEP-2009, sequence version 1. DT 14-MAY-2014, entry version 21. DE SubName: Full=VblB3 protein; GN Name=vblB3; OrderedLocusNames=Bgr_17980; OS Bartonella grahamii (strain as4aup). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=634504; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=as4aup; RX PubMed=19578403; DOI=10.1371/journal.pgen.1000546; RA Berglund E.C., Frank A.C., Calteau A., Vinnere Pettersson O., RA Granberg F., Eriksson A.S., Naslund K., Holmberg M., Lindroos H., RA Andersson S.G.; RT "Run-off replication of host-adaptability genes is associated with RT gene transfer agents in the genome of mouse-infecting Bartonella RT grahamii."; RL PLoS Genet. 5:E1000546-E1000546(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001562; ACS51908.1; -; Genomic_DNA. DR RefSeq; YP_002972600.1; NC_012846.1. DR STRING; 634504.Bgr_17980; -. DR EnsemblBacteria; ACS51908; ACS51908; Bgr_17980. DR GeneID; 7998762; -. DR KEGG; bgr:Bgr_17980; -. DR PATRIC; 20543065; VBIBarGra67450_1949. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; BGRA634504:GJI6-1791-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 107 AA; 12219 MW; 0E9802D4B83A4563 CRC64; MKEHDKLTED TLFLACTRPA MIAGVTVEAM GLNAIGTMML FIMTGNIFLI TFGVMLHFIF KEILKHDHNK FRILLTWQKT SIFARNSSLW GGGSISPLRL IRNYEEL // ID C6AAS1_BARGA Unreviewed; 102 AA. AC C6AAS1; DT 01-SEP-2009, integrated into UniProtKB/TrEMBL. DT 01-SEP-2009, sequence version 1. DT 14-MAY-2014, entry version 22. DE SubName: Full=TrwM protein; GN Name=trwM; OrderedLocusNames=Bgr_19170; OS Bartonella grahamii (strain as4aup). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=634504; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=as4aup; RX PubMed=19578403; DOI=10.1371/journal.pgen.1000546; RA Berglund E.C., Frank A.C., Calteau A., Vinnere Pettersson O., RA Granberg F., Eriksson A.S., Naslund K., Holmberg M., Lindroos H., RA Andersson S.G.; RT "Run-off replication of host-adaptability genes is associated with RT gene transfer agents in the genome of mouse-infecting Bartonella RT grahamii."; RL PLoS Genet. 5:E1000546-E1000546(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001562; ACS52010.1; -; Genomic_DNA. DR RefSeq; YP_002972702.1; NC_012846.1. DR STRING; 634504.Bgr_19170; -. DR EnsemblBacteria; ACS52010; ACS52010; Bgr_19170. DR GeneID; 7998880; -. DR KEGG; bgr:Bgr_19170; -. DR PATRIC; 20543363; VBIBarGra67450_2098. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; FWGASSY; -. DR BioCyc; BGRA634504:GJI6-1909-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 102 AA; 12035 MW; 86114B841EE9C3A1 CRC64; MKSQEQKEFP LFKGATRVPT IWGVPMMPFI VMVMGVAVIA MTVSIFLWII APPLWFIMVQ ITKNDDKAFR IWWLWIDTKF RNRNKGFWGA SSYSPSDYSK RR // ID C6AER4_BARGA Unreviewed; 102 AA. AC C6AER4; DT 01-SEP-2009, integrated into UniProtKB/TrEMBL. DT 01-SEP-2009, sequence version 1. DT 14-MAY-2014, entry version 23. DE SubName: Full=VirB3 protein; GN Name=virB3; OrderedLocusNames=Bgr_14820; OS Bartonella grahamii (strain as4aup). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=634504; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=as4aup; RX PubMed=19578403; DOI=10.1371/journal.pgen.1000546; RA Berglund E.C., Frank A.C., Calteau A., Vinnere Pettersson O., RA Granberg F., Eriksson A.S., Naslund K., Holmberg M., Lindroos H., RA Andersson S.G.; RT "Run-off replication of host-adaptability genes is associated with RT gene transfer agents in the genome of mouse-infecting Bartonella RT grahamii."; RL PLoS Genet. 5:E1000546-E1000546(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001562; ACS51669.1; -; Genomic_DNA. DR RefSeq; YP_002972358.1; NC_012846.1. DR STRING; 634504.Bgr_14820; -. DR EnsemblBacteria; ACS51669; ACS51669; Bgr_14820. DR GeneID; 7998449; -. DR KEGG; bgr:Bgr_14820; -. DR PATRIC; 20542218; VBIBarGra67450_1542. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; HDHNMFR; -. DR OrthoDB; EOG6VMTNS; -. DR BioCyc; BGRA634504:GJI6-1478-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 102 AA; 11603 MW; 8092D5DA92CB0866 CRC64; MNEDTLFLAC TRPSMFAGVT MEAMALNVMA TSVLFILTSD FTMIGFGIGM HFILREVTKH DHNQFRVLFA WLNTRGKQKN LNRWGGGSTS PLRLIRTYKE LS // ID C6AF11_BARGA Unreviewed; 107 AA. AC C6AF11; DT 01-SEP-2009, integrated into UniProtKB/TrEMBL. DT 01-SEP-2009, sequence version 1. DT 14-MAY-2014, entry version 23. DE SubName: Full=VblB3 protein; GN Name=vblB3; OrderedLocusNames=Bgr_p00070; OS Bartonella grahamii (strain as4aup). OG Plasmid pBGR3. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=634504; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=as4aup; PLASMID=pBGR3; RX PubMed=19578403; DOI=10.1371/journal.pgen.1000546; RA Berglund E.C., Frank A.C., Calteau A., Vinnere Pettersson O., RA Granberg F., Eriksson A.S., Naslund K., Holmberg M., Lindroos H., RA Andersson S.G.; RT "Run-off replication of host-adaptability genes is associated with RT gene transfer agents in the genome of mouse-infecting Bartonella RT grahamii."; RL PLoS Genet. 5:E1000546-E1000546(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001563; ACS52137.1; -; Genomic_DNA. DR RefSeq; YP_002972814.1; NC_012847.1. DR STRING; 634504.Bgr_p00070; -. DR EnsemblBacteria; ACS52137; ACS52137; Bgr_p00070. DR GeneID; 7999006; -. DR KEGG; bgr:Bgr_p00070; -. DR PATRIC; 20543630; VBIBarGra67450_2230. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; TIGIAMH; -. DR OrthoDB; EOG6VMTNS; -. DR BioCyc; BGRA634504:GJI6-2030-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 107 AA; 12124 MW; 638C12DA6E0254A1 CRC64; MKEHDKLTED TLFLACTRPA MIAGVTVEAM GLNAIGTMIL FIMTGNIFLV TIGIAMHFIF KEILKHDHNK FRILLTWQKT SIFARNSSLW GGGSISPLRL IRNYEEL // ID C6B8R3_RHILS Unreviewed; 99 AA. AC C6B8R3; DT 01-SEP-2009, integrated into UniProtKB/TrEMBL. DT 01-SEP-2009, sequence version 1. DT 14-MAY-2014, entry version 26. DE SubName: Full=Conjugal transfer TrbD family protein; GN OrderedLocusNames=Rleg_5484; OS Rhizobium leguminosarum bv. trifolii (strain WSM1325). OG Plasmid pR132503. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium. OX NCBI_TaxID=395491; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=WSM1325; PLASMID=pR132503; RX PubMed=21304718; RA Reeve W., O'Hara G., Chain P., Ardley J., Brau L., Nandesena K., RA Tiwari R., Copeland A., Nolan M., Han C., Brettin T., Land M., RA Ovchinikova G., Ivanova N., Mavromatis K., Markowitz V., Kyrpides N., RA Melino V., Denton M., Yates R., Howieson J.; RT "Complete genome sequence of Rhizobium leguminosarum bv. trifolii RT strain WSM1325, an effective microsymbiont of annual Mediterranean RT clovers."; RL Stand. Genomic Sci. 2:347-356(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001625; ACS60301.1; -; Genomic_DNA. DR RefSeq; YP_002978852.1; NC_012853.1. DR STRING; 395491.Rleg_5484; -. DR EnsemblBacteria; ACS60301; ACS60301; Rleg_5484. DR GeneID; 8016793; -. DR KEGG; rlg:Rleg_5484; -. DR PATRIC; 23117615; VBIRhiLeg48398_5833. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; LRMMAKS; -. DR OrthoDB; EOG6N6849; -. DR BioCyc; RLEG395491:GHX2-6206-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 99 AA; 11245 MW; B66A8A8287C51706 CRC64; MAVEATTLQR NPIHRALSRP NLLMGADREL VLITGLAAII LIFVVLTIYS ALFGAALWTV IVAALRMMAK ADPLMRRVYI RHMAYRPSYR ATSSPWRRY // ID C6BQD4_RALP1 Unreviewed; 106 AA. AC C6BQD4; DT 01-SEP-2009, integrated into UniProtKB/TrEMBL. DT 01-SEP-2009, sequence version 1. DT 14-MAY-2014, entry version 23. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Rpic12D_4746; OS Ralstonia pickettii (strain 12D). OG Plasmid pRp12D01. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Ralstonia. OX NCBI_TaxID=428406; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=12D; PLASMID=pRp12D01; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Meincke L., RA Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., RA Kyrpides N., Ovchinnikova G., Marsh T., Richardson P.; RT "Complete sequence plasmid 1 of Ralstonia pickettii 12D."; RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001646; ACS65981.1; -; Genomic_DNA. DR RefSeq; YP_002979635.1; NC_012855.1. DR STRING; 428406.Rpic12D_4746; -. DR EnsemblBacteria; ACS65981; ACS65981; Rpic12D_4746. DR GeneID; 8017321; -. DR KEGG; rpf:Rpic12D_4746; -. DR PATRIC; 20238498; VBIRalPic57998_0370. DR eggNOG; NOG278684; -. DR KO; K03198; -. DR OMA; KRDENIY; -. DR OrthoDB; EOG63NMRB; -. DR BioCyc; RPIC428406:GH9Y-4815-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 106 AA; 12655 MW; 3EB6E25DCAD101E3 CRC64; MDYEPRTTVI HPSLMRVQTI GGVERRLAIV HISIAVAMLG VWRIWLYLPV FVLLHLFLVW LTKRDENIYQ IYTQYSKQSD IYDPWVRIDR KSKIKRPHGF GRDILC // ID C6BRD3_RALP1 Unreviewed; 118 AA. AC C6BRD3; DT 01-SEP-2009, integrated into UniProtKB/TrEMBL. DT 01-SEP-2009, sequence version 1. DT 14-MAY-2014, entry version 22. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Rpic12D_5419; OS Ralstonia pickettii (strain 12D). OG Plasmid pRp12D03. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Ralstonia. OX NCBI_TaxID=428406; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=12D; PLASMID=pRp12D03; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Meincke L., RA Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., RA Kyrpides N., Ovchinnikova G., Marsh T., Richardson P.; RT "Complete sequence plasmid 3 of Ralstonia pickettii 12D."; RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001648; ACS66641.1; -; Genomic_DNA. DR RefSeq; YP_002978450.1; NC_012851.1. DR STRING; 428406.Rpic12D_5419; -. DR EnsemblBacteria; ACS66641; ACS66641; Rpic12D_5419. DR GeneID; 8015991; -. DR KEGG; rpf:Rpic12D_5419; -. DR PATRIC; 20238321; VBIRalPic57998_0282. DR HOGENOM; HOG000001532; -. DR KO; K03198; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; RPIC428406:GH9Y-5488-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 118 AA; 13220 MW; 86CC05FD3A06FF0B CRC64; MTTAIEAGTP AADTPADSLS VPIRKTMLEK FLMGGIDRKL CAGELAILIF TAVGLRNPWV LLALPPTHLI LWLATKRDPD QFNCYLRYSK QGDFYEPRPM LRQTRNARPK GFARGELC // ID C6BT65_DESAD Unreviewed; 99 AA. AC C6BT65; DT 01-SEP-2009, integrated into UniProtKB/TrEMBL. DT 01-SEP-2009, sequence version 1. DT 13-NOV-2013, entry version 20. DE SubName: Full=Conjugal transfer TrbD family protein; GN OrderedLocusNames=Desal_1707; OS Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / OS VKM B-1763). OC Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; OC Desulfovibrionaceae; Desulfovibrio. OX NCBI_TaxID=526222; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., RA Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., RA Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., RA Anderson I., Wall J.D., Arkin A.P., Dehal P., Chivian D., Giles B., RA Hazen T.C.; RT "Complete sequence of Desulfovibrio salexigens DSM 2638."; RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001649; ACS79769.1; -; Genomic_DNA. DR RefSeq; YP_002991308.1; NC_012881.1. DR STRING; 526222.Desal_1707; -. DR EnsemblBacteria; ACS79769; ACS79769; Desal_1707. DR GeneID; 8092553; -. DR KEGG; dsa:Desal_1707; -. DR PATRIC; 21758909; VBIDesSal121003_1716. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; LRMMAKS; -. DR OrthoDB; EOG6FZ4KH; -. DR BioCyc; DSAL526222:GHES-1733-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 99 AA; 11336 MW; 86484FA80CEFAD5A CRC64; MSLSQELLVR TVVIHRSLHR HTLVLGAERE LVMSSALISF ILVVVGKDLV SAGAALFFWI TSVILLRMMA KEDPQMSQVW LRRNAYQTIY PAKSTPWRR // ID C6CEZ4_DICZE Unreviewed; 915 AA. AC C6CEZ4; DT 01-SEP-2009, integrated into UniProtKB/TrEMBL. DT 01-SEP-2009, sequence version 1. DT 14-MAY-2014, entry version 26. DE SubName: Full=CagE TrbE VirB component of type IV transporter system; GN OrderedLocusNames=Dd1591_1487; OS Dickeya zeae (strain Ech1591). OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Dickeya. OX NCBI_TaxID=561229; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Ech1591; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., RA Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., RA Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., RA Ovchinnikova G., Balakrishnan V., Glasner J., Perna N.T.; RT "Complete sequence of Dickeya zeae Ech1591."; RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001655; ACT06345.1; -; Genomic_DNA. DR RefSeq; YP_003003824.1; NC_012912.1. DR STRING; 561229.Dd1591_1487; -. DR EnsemblBacteria; ACT06345; ACT06345; Dd1591_1487. DR GeneID; 8117362; -. DR KEGG; dze:Dd1591_1487; -. DR PATRIC; 21798930; VBIDicZea111179_1522. DR eggNOG; COG3451; -. DR HOGENOM; HOG000119263; -. DR KO; K03199; -. DR OMA; RYFRIRT; -. DR OrthoDB; EOG6HMX9P; -. DR BioCyc; DZEA561229:GJ85-1532-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 915 AA; 103298 MW; 0F7BACC55B871D13 CRC64; MTTLNKALTR PAAIMGIPIV PFVLVSGAIV LLSVYVSYYL TLLLIPAWLE MRAKARADIH YFGLLWLAFK TRGRFGTNRH FGATAMLANQ YDAVDISEFT DKMKLNARIT LDKYIPYSSH LHPHVIRNRH GDFVASWELG GTLFECEDEH HLTLMTSHLN NLIRAYEGLP VTFYIHRIRE TYQDAFEATS GIPFSDEVAA RYYRALNAKP LWRHRLFFTV CYAPFSALEK KAMKTQPAGK RQAALDEALK VMLEYHAALG SALSRYMATP LGTYEEKGRV YSSQLAFYHR LITGQWQPVA VTRSPFYLTL STPDVFFTTD TAECQTVGGS RFFRSLEIKD YSPETATGLL DALLYAESEY VLTQSFTCMA RDEAQHHIRL AEKRLNATDD DALSQREELV VLRDLLQSGH VSCGKYHFSL LVSSASADQV VRETHALAQP FTDLGIMTSL STLSLPAAYL AQLPGMYPFR PRLVVVSSQN YADLGSLHNF HPHKRSGNPW GDAIAILTSP GGGGYYLNLH DSQVGRDDFN EKTPGNTAII GKTGSGKTLL MTMMQHLMQK YRHPATFSAA APGKRLTTVY FDKDRAAEMS IRQMGGRYFR IRTGTPAGFN PFSLAPTRRN ISFIKQLVRM LCRRNGKPLD PRDEARISAA VDTLMQDYPP ELRRYGITRL LEVLPEPPTR EARTNGLRIR LKQWAQGGEF GWIFDNAEDS FNIGESDNIG IDGTEFLDDD DIRGPITFYL LFRVTSLLDG RRLVMFMDEF WKWLADVEFS RFSLNMLKVI RKLNGIFIPA TQSPDEIVRH PIAPAIIEQC STQIFLANPK ASRADYVEKM NVPDSVYDTV RRLDPGEHYM VIMKTPLRAG ETRPFVALAR MDLSGIGNLT TILSGSEDNL KRFDALYQEG MSPQDWKAAF LEQAI // ID C6DZ89_GEOSM Unreviewed; 84 AA. AC C6DZ89; DT 01-SEP-2009, integrated into UniProtKB/TrEMBL. DT 01-SEP-2009, sequence version 1. DT 14-MAY-2014, entry version 21. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=GM21_2349; OS Geobacter sp. (strain M21). OC Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; OC Geobacteraceae; Geobacter. OX NCBI_TaxID=443144; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=M21; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., RA Tice H., Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., RA Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., RA Ovchinnikova G., Lovley D.; RT "Complete sequence of Geobacter sp. M21."; RL Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001661; ACT18397.1; -; Genomic_DNA. DR RefSeq; YP_003022155.1; NC_012918.1. DR STRING; 443144.GM21_2349; -. DR EnsemblBacteria; ACT18397; ACT18397; GM21_2349. DR GeneID; 8137690; -. DR KEGG; gem:GM21_2349; -. DR PATRIC; 22019142; VBIGeoSp56140_2294. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; WAIGHIA; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; GSP443144:GHKM-2391-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 84 AA; 9151 MW; EED6AD81C4AADB15 CRC64; MAREGYEIPI HRSLIQPILI GGVPRTIALI NGTLVAALGL GLHSLLAVPV GLVIHFLALA ATRADPEFLS CFRRHVRQKN IYTV // ID C6HTX6_9BACT Unreviewed; 102 AA. AC C6HTX6; DT 01-SEP-2009, integrated into UniProtKB/TrEMBL. DT 01-SEP-2009, sequence version 1. DT 09-FEB-2010, entry version 4. DE SubName: Full=Probable conjugal transfer protein (TrbD); GN ORFNames=UBAL3_44810041; OS Leptospirillum ferrodiazotrophum. OC Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum. OX NCBI_TaxID=412449; RN [1] RP NUCLEOTIDE SEQUENCE. RX PubMed=19429552; DOI=10.1128/AEM.02943-08; RA Goltsman D.S., Denef V.J., Singer S.W., VerBerkmoes N.C., Lefsrud M., RA Mueller R.S., Dick G.J., Sun C.L., Wheeler K.E., Zemla A., Baker B.J., RA Hauser L., Land M., Shah M.B., Thelen M.P., Hettich R.L., RA Banfield J.F.; RT "Community genomic and proteomic analyses of chemoautotrophic iron- RT oxidizing "Leptospirillum rubarum" (Group II) and "Leptospirillum RT ferrodiazotrophum" (Group III) bacteria in acid mine drainage RT biofilms."; RL Appl. Environ. Microbiol. 75:4599-4615(2009). RN [2] RP NUCLEOTIDE SEQUENCE. RA Goltsman D.S.A., Denef V.J., Singer S.W., Verberkmoes N.C., RA Lefsrud M., Mueller R., Dick G.J., Sun C., Wheeler K., Zemla A., RA Baker B.J., Hauser L., Land M., Shah M.B., Thelen M.P., Hettich R.L., RA Banfield J.F.; RL Submitted (MAY-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG693852; EES53904.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 102 AA; 11262 MW; 8F1AAEF987427182 CRC64; MAAREVPIHQ SLVKPLLLAG GDRELVLMNI VGQAGALFMM GLSVFSIALV SVLGGVLHVA LVVMGKKDPL MREAWMVYRT FRIFYPARSE CRVKPPKIRK GL // ID C6L117_9BACT Unreviewed; 93 AA. AC C6L117; DT 22-SEP-2009, integrated into UniProtKB/TrEMBL. DT 22-SEP-2009, sequence version 1. DT 21-MAR-2012, entry version 5. DE SubName: Full=Conjugal transfer protein TrbD; OS uncultured bacterium. OC Bacteria; environmental samples. OX NCBI_TaxID=77133; RN [1] RP NUCLEOTIDE SEQUENCE. RA Suenaga H., Ohnuki T., Miyazaki K.; RT "Functional screening of a metagenomic library for genes involved in RT microbial degradation of aromatic compounds."; RL Environ. Microbiol. 9:2289-2297(2007). RN [2] RP NUCLEOTIDE SEQUENCE. RA Suenaga H., Koyama Y., Miyakoshi M., Miyazaki R., Yano H., Sota M., RA Ohtsubo Y., Tsuda M., Miyazaki K.; RT "Novel organization of aromatic degradation pathway genes in a RT microbial community as revealed by metagenomic analysis."; RL ISME J. 0:0-0(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AB471767; BAH90436.1; -; Genomic_DNA. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 93 AA; 9731 MW; 8D136A3CC95EBF45 CRC64; MAVSFEALDA VPGFAVPVHR ALTEPILLGG APRSVAILNG TLAGAVGLGL QLWLAGILIW AVGHIAAVWA AKRDPLFVEV ARRHLRIPGH LSV // ID C6M7B9_NEISI Unreviewed; 143 AA. AC C6M7B9; DT 22-SEP-2009, integrated into UniProtKB/TrEMBL. DT 22-SEP-2009, sequence version 1. DT 18-SEP-2013, entry version 5. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=NEISICOT_02426; OS Neisseria sicca ATCC 29256. OC Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; OC Neisseriaceae; Neisseria. OX NCBI_TaxID=547045; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 29256; RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., RA Courtney L., Fronick C., Harrison M., Strong C., Farmer C., RA Delahaunty K., Markovic C., Hall O., Minx P., Tomlinson C., RA Mitreva M., Nelson J., Hou S., Wollam A., Pepin K.H., Johnson M., RA Bhonagiri V., Nash W.E., Warren W., Chinwalla A., Mardis E.R., RA Wilson R.K.; RL Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACKO02000015; EET43842.1; -; Genomic_DNA. DR EnsemblBacteria; EET43842; EET43842; NEISICOT_02426. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 143 AA; 16281 MW; 2852B2F803D47EFD CRC64; MNGLPEINID TEYSSYEGLS RVAMLAGVPI IPGFIILVVF MATAMFLMPV YGLKAFGIFL LALPCIYFLR MLTKRDDQAL RILGLEIYWW FVRRKSNLFG DTLTITATKF GRDRDDYIRF IKEETEEAAA AAKLFSESQS ARC // ID C6NYB9_9GAMM Unreviewed; 123 AA. AC C6NYB9; DT 22-SEP-2009, integrated into UniProtKB/TrEMBL. DT 22-SEP-2009, sequence version 1. DT 19-MAR-2014, entry version 8. DE SubName: Full=Uncharacterized protein; GN ORFNames=ACA_0798; OS Acidithiobacillus caldus ATCC 51756. OC Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; OC Acidithiobacillaceae; Acidithiobacillus. OX NCBI_TaxID=637389; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 51756; RX PubMed=19617360; DOI=10.1128/JB.00843-09; RA Valdes J., Quatrini R., Hallberg K., Dopson M., Valenzuela P.D., RA Holmes D.S.; RT "Draft genome sequence of the extremely acidophilic bacterium RT Acidithiobacillus caldus ATCC 51756 reveals metabolic versatility in RT the genus Acidithiobacillus."; RL J. Bacteriol. 191:5877-5878(2009). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACVD01000120; EET26046.1; -; Genomic_DNA. DR EnsemblBacteria; EET26046; EET26046; ACA_0798. DR PATRIC; 24328994; VBIAciCal31047_2582. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 123 AA; 13602 MW; BAF6CAA530E25817 CRC64; MYQSLVRPHL LMGAERQATL LNAGFAMLVY FFTMSLPGIV VAVVLFSITQ AVLQHLAKND AQMIAIVQRS RKYQPFYGDG ASLDAPYRDV PQFHPVAPTT KLLSWFTRTG KAKTTNQGAK AEA // ID C6V5Y2_NEORI Unreviewed; 98 AA. AC C6V5Y2; DT 22-SEP-2009, integrated into UniProtKB/TrEMBL. DT 22-SEP-2009, sequence version 1. DT 14-MAY-2014, entry version 19. DE SubName: Full=Type IV secretion system protein VirB3; GN OrderedLocusNames=NRI_0832; OS Neorickettsia risticii (strain Illinois). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Neorickettsia. OX NCBI_TaxID=434131; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Illinois; RX PubMed=19661282; DOI=10.1093/nar/gkp642; RA Lin M., Zhang C., Gibson K., Rikihisa Y.; RT "Analysis of complete genome sequence of Neorickettsia risticii: RT causative agent of Potomac horse fever."; RL Nucleic Acids Res. 37:6076-6091(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001431; ACT69796.1; -; Genomic_DNA. DR RefSeq; YP_003082036.1; NC_013009.1. DR STRING; 434131.NRI_0832; -. DR EnsemblBacteria; ACT69796; ACT69796; NRI_0832. DR GeneID; 8220885; -. DR KEGG; nri:NRI_0832; -. DR PATRIC; 22679920; VBINeoRis104330_0777. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; NRIS434131:GJCC-832-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 98 AA; 11177 MW; 0E92F0F19BE1A28B CRC64; MGVGSLGLDP LFKGLTRPAM FLGVSFTFSA MNLIISLLAY ILTKNLFILL FFMPTIHGIG YLICFNEPLF LELFLVRNQK CMRCKNRAYH NANSYDVF // ID C6XES3_METSD Unreviewed; 109 AA. AC C6XES3; DT 22-SEP-2009, integrated into UniProtKB/TrEMBL. DT 22-SEP-2009, sequence version 1. DT 13-NOV-2013, entry version 18. DE SubName: Full=Conjugal transfer protein; GN OrderedLocusNames=Msip34_2906; OS Methylovorus sp. (strain SIP3-4) (Methylotenera sp. (strain SIP3-4)). OG Plasmid pMsip01. OC Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; OC Methylophilaceae; Methylovorus. OX NCBI_TaxID=582744; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=SIP3-4; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., RA Bruce D., Goodwin L., Pitluck S., Clum A., Larimer F., Land M., RA Hauser L., Kyrpides N., Mikhailova N., Kayluzhnaya M., RA Chistoserdova L.; RT "Complete sequence of plasmid 1 of Methylovorus sp. SIP3-4."; RL Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001675; ACT52130.1; -; Genomic_DNA. DR RefSeq; YP_003052657.1; NC_012970.1. DR STRING; 582744.Msip34_2906; -. DR EnsemblBacteria; ACT52130; ACT52130; Msip34_2906. DR GeneID; 8174769; -. DR KEGG; mei:Msip34_2906; -. DR eggNOG; COG5268; -. DR KO; K03198; -. DR OrthoDB; EOG64N9S2; -. DR BioCyc; MGLU582744:GHXQ-2949-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 109 AA; 12538 MW; C41635B5053193D9 CRC64; MSNQLHTSKI RSSLIRPLGW MGGERLLVLF ALLLSIYFAF IYSLTVGLWQ AAVVSLSIWG ISMAVLTRMG KHDMQMLKVY WRHRKYKTFY PAKGRLNSPV REMGPFSGK // ID C6XNW3_HIRBI Unreviewed; 84 AA. AC C6XNW3; DT 22-SEP-2009, integrated into UniProtKB/TrEMBL. DT 22-SEP-2009, sequence version 1. DT 14-MAY-2014, entry version 25. DE SubName: Full=Conjugal transfer protein; GN OrderedLocusNames=Hbal_0665; OS Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Hyphomonadaceae; Hirschia. OX NCBI_TaxID=582402; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 49814 / DSM 5838 / IFAM 1418; RX PubMed=21705585; DOI=10.1128/JB.05453-11; RG US DOE Joint Genome Institute; RA Brown P.J., Kysela D.T., Buechlein A., Hemmerich C., Brun Y.V.; RT "Genome sequences of eight morphologically diverse RT alphaproteobacteria."; RL J. Bacteriol. 193:4567-4568(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001678; ACT58366.1; -; Genomic_DNA. DR RefSeq; YP_003059063.1; NC_012982.1. DR STRING; 582402.Hbal_0665; -. DR EnsemblBacteria; ACT58366; ACT58366; Hbal_0665. DR GeneID; 8184249; -. DR KEGG; hba:Hbal_0665; -. DR PATRIC; 22129294; VBIHirBal9878_0685. DR eggNOG; NOG265556; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; AVWATKR; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; HBAL582402:GHMV-676-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 84 AA; 8952 MW; 251B626A023B0E48 CRC64; MVDGYEIPLH RSLAEPILMG GAPRGAAIAI GTLAAALALG LRLWIPGLLL WMIGHSTAVF MAKSDPDFMT VASRSARHKE HLSC // ID C7LGS2_BRUMC Unreviewed; 116 AA. AC C7LGS2; DT 13-OCT-2009, integrated into UniProtKB/TrEMBL. DT 13-OCT-2009, sequence version 1. DT 14-MAY-2014, entry version 22. DE SubName: Full=Type IV secretion system protein VirB3; GN Name=virB3; OrderedLocusNames=BMI_II69; OS Brucella microti (strain CCM 4915). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=568815; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CCM 4915; RX PubMed=19653890; DOI=10.1186/1471-2164-10-352; RA Audic S., Lescot M., Claverie J.M., Scholz H.C.; RT "Brucella microti: the genome sequence of an emerging pathogen."; RL BMC Genomics 10:352-352(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001579; ACU49210.1; -; Genomic_DNA. DR RefSeq; YP_003104872.1; NC_013118.1. DR ProteinModelPortal; C7LGS2; -. DR STRING; 568815.BMI_II69; -. DR EnsemblBacteria; ACU49210; ACU49210; BMI_II69. DR GeneID; 8317845; -. DR KEGG; bmr:BMI_II69; -. DR PATRIC; 17802634; VBIBruMic92249_0065. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; FWGASSY; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BMIC568815:GJUE-2271-MONOMER; -. DR PRO; PR:C7LGS2; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID C7N9N8_LEPBD Unreviewed; 79 AA. AC C7N9N8; DT 13-OCT-2009, integrated into UniProtKB/TrEMBL. DT 13-OCT-2009, sequence version 1. DT 19-FEB-2014, entry version 18. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=Lebu_0967; OS Leptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC OS 10249). OC Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; OC Leptotrichia. OX NCBI_TaxID=523794; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249; RX PubMed=21304648; DOI=10.4056/sigs.1854; RA Ivanova N., Gronow S., Lapidus A., Copeland A., Glavina Del Rio T., RA Nolan M., Lucas S., Chen F., Tice H., Cheng J.F., Saunders E., RA Bruce D., Goodwin L., Brettin T., Detter J.C., Han C., Pitluck S., RA Mikhailova N., Pati A., Mavrommatis K., Chen A., Palaniappan K., RA Land M., Hauser L., Chang Y.J., Jeffries C.D., Chain P., Rohde C., RA Goker M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., RA Kyrpides N.C., Klenk H.P.; RT "Complete genome sequence of Leptotrichia buccalis type strain (C- RT 1013-b)."; RL Stand. Genomic Sci. 1:126-132(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001685; ACV38869.1; -; Genomic_DNA. DR RefSeq; YP_003163860.1; NC_013192.1. DR STRING; 523794.Lebu_0967; -. DR EnsemblBacteria; ACV38869; ACV38869; Lebu_0967. DR GeneID; 8407672; -. DR KEGG; lba:Lebu_0967; -. DR PATRIC; 22401250; VBILepBuc70646_0985. DR OrthoDB; EOG6DJZC4; -. DR BioCyc; LBUC523794:GHCR-993-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 79 AA; 9346 MW; B413A409D8FC5CEE CRC64; MKLKVYKSLL DVKMIMGLPY KIFISLVLFT GIIFLIFRHW IIFIPAGTIY ILCAVMSVRD SMTLELIMEH YKTERYLNP // ID C7RW42_ACCPU Unreviewed; 103 AA. AC C7RW42; DT 13-OCT-2009, integrated into UniProtKB/TrEMBL. DT 13-OCT-2009, sequence version 1. DT 14-MAY-2014, entry version 22. DE SubName: Full=Uncharacterized protein; DE Flags: Precursor; GN OrderedLocusNames=CAP2UW1_4730; OS Accumulibacter phosphatis (strain UW-1). OG Plasmid pAph01. OC Bacteria; Proteobacteria; Betaproteobacteria; OC Candidatus Accumulibacter. OX NCBI_TaxID=522306; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=UW-1; PLASMID=pAph01; RG US DOE Joint Genome Institute; RA Martin H.G., Ivanova N., Kunin V., Warnecke F., Barry K., He S., RA Salamov A., Szeto E., Dalin E., Pangilinan J.L., Lapidus A., Lowry S., RA Kyrpides N.C., McMahon K.D., Hugenholtz P.; RT "Complete sequence of plasmid1 of Candidatus Accumulibacter phosphatis RT clade IIA str. UW-1."; RL Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001716; ACV37852.1; -; Genomic_DNA. DR RefSeq; YP_003165299.1; NC_013193.1. DR STRING; 522306.CAP2UW1_4730; -. DR EnsemblBacteria; ACV37852; ACV37852; CAP2UW1_4730. DR GeneID; 8402091; -. DR KEGG; app:CAP2UW1_4730; -. DR PATRIC; 21255947; VBICanAcc132554_0247. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OrthoDB; EOG6N6849; -. DR BioCyc; APHO522306:GHXL-4679-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 103 AA; 11995 MW; 224B0C6583D44223 CRC64; MALRKIPIRR AGNRDNLFMG GDRELVMFSG LLAFALVFSA QELRATVVGL LLWFGALYAL RIMAKADPRM RHVYLRHRRY KPYYPARSTP FRDNTTSQGK QYQ // ID C7T5B3_PSEPU Unreviewed; 103 AA. AC C7T5B3; DT 13-OCT-2009, integrated into UniProtKB/TrEMBL. DT 13-OCT-2009, sequence version 1. DT 14-MAY-2014, entry version 9. DE SubName: Full=TrbD; GN Name=trbD; OS Pseudomonas putida (Arthrobacter siderocapsulatus). OG Plasmid pW2. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. OX NCBI_TaxID=303; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=W2; PLASMID=pW2; RA Jia L., Li J., Wang X.; RT "Degradation of BPA by Pseudomonas putida W2 and sequencing and RT analysis of the corresponding plasmid."; RL Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ948173; ACU65312.1; -; Genomic_DNA. DR RefSeq; YP_003162680.1; NC_013176.1. DR GeneID; 8382013; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11802 MW; 8F4CEDEE6B161847 CRC64; MALRAIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QEVRATVFGI ALWFGALFAL RLMAKADPKL RHVYLRHRRY KPYYPARSTP FRDNTPSQGK QYK // ID C7XQ01_FUSNV Unreviewed; 88 AA. AC C7XQ01; DT 13-OCT-2009, integrated into UniProtKB/TrEMBL. DT 11-DEC-2013, sequence version 2. DT 19-FEB-2014, entry version 9. DE SubName: Full=Uncharacterized protein; GN ORFNames=HMPREF0946_00967; OS Fusobacterium nucleatum subsp. vincentii 3_1_36A2. OC Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; OC Fusobacterium. OX NCBI_TaxID=469604; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=3_1_36A2; RG The Broad Institute Genome Sequencing Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Strauss J., White A., RA Allen-Vercoe E., Walker B., Young S.K., Zeng Q., Gargeya S., RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M., RA Berlin A.M., Chapman S.B., Goldberg J., Griggs A., Gujja S., RA Hansen M., Howarth C., Imamovic A., Larimer J., McCowen C., RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., RA Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J., RA Nusbaum C., Birren B.; RT "The Genome Sequence of Fusobacterium sp. 3_1_36A2."; RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003700; EEU32894.2; -; Genomic_DNA. DR RefSeq; YP_008477258.1; NC_022196.1. DR EnsemblBacteria; EEU32894; EEU32894; HMPREF0946_00967. DR GeneID; 16728223; -. DR KEGG; fnc:HMPREF0946_00967; -. DR PATRIC; 30288987; VBIFusSp42159_0242. DR KO; K03198; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 88 AA; 10152 MW; 9B9FC59722203B20 CRC64; MEENIEELAV PVCQGLIKPL TIAGVSREAM ILNVGVGTAF VIAVRAWYML PFFFLTHYLL YIACKKDPMV IKIFIKKYIK QKNYFYEG // ID C8S1Y8_9RHOB Unreviewed; 88 AA. AC C8S1Y8; DT 03-NOV-2009, integrated into UniProtKB/TrEMBL. DT 03-NOV-2009, sequence version 1. DT 19-FEB-2014, entry version 6. DE SubName: Full=Uncharacterized protein; GN ORFNames=Rsw2DRAFT_2066; OS Rhodobacter sp. SW2. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Rhodobacter. OX NCBI_TaxID=371731; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=SW2; RG US DOE Joint Genome Institute (JGI-PGF); RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., RA Bruce D., Goodwin L., Pitluck S., Larimer F., Land M.L., Hauser L., RA Emerson D.; RT "The draft genome of Rhodobacter sp. SW2."; RL Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACYY01000012; EEW25086.1; -; Genomic_DNA. DR EnsemblBacteria; EEW25086; EEW25086; Rsw2DRAFT_2066. DR PATRIC; 28440866; VBIRhoSp55960_2089. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 88 AA; 9927 MW; 7211010F346E9ADC CRC64; MEKSAVILGL SRQAKFLGLP MPYAMAVGAM TVLPFILFKP VWWFLTAPIW YGLARFATKL NPNGHHVFAV MMQVTPMAIL RKGRRHVS // ID C8WDW2_ZYMMN Unreviewed; 93 AA. AC C8WDW2; DT 03-NOV-2009, integrated into UniProtKB/TrEMBL. DT 03-NOV-2009, sequence version 1. DT 13-NOV-2013, entry version 19. DE SubName: Full=Conjugal transfer protein TrbB; GN OrderedLocusNames=Za10_1358; OS Zymomonas mobilis subsp. mobilis (strain NCIB 11163). OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Zymomonas. OX NCBI_TaxID=622759; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NCIB 11163; RX PubMed=19767433; DOI=10.1128/JB.01084-09; RA Kouvelis V.N., Saunders E., Brettin T.S., Bruce D., Detter C., Han C., RA Typas M.A., Pappas K.M.; RT "Complete genome sequence of the ethanol producer Zymomonas mobilis RT NCIMB 11163."; RL J. Bacteriol. 191:7140-7141(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001722; ACV75898.1; -; Genomic_DNA. DR RefSeq; YP_003226482.1; NC_013355.1. DR STRING; 622759.Za10_1358; -. DR EnsemblBacteria; ACV75898; ACV75898; Za10_1358. DR GeneID; 8472482; -. DR KEGG; zmn:Za10_1358; -. DR PATRIC; 24155998; VBIZymMob135463_1501. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; ZMOB622759:GI1C-1502-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9828 MW; 26DA91599CA93F23 CRC64; MAGGLEQLDA VPGFSIPVHR ALTEHILLGG APRSIAIVNG TLAGAVGLGL RLWLVGIAIW AVGHFLAVWA AKRDPLFVEV GRRHLRIPGH LSV // ID C9D4T1_9RHOB Unreviewed; 67 AA. AC C9D4T1; DT 03-NOV-2009, integrated into UniProtKB/TrEMBL. DT 03-NOV-2009, sequence version 1. DT 03-APR-2013, entry version 5. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN ORFNames=SCH4B_4810; OS Silicibacter sp. TrichCH4B. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Ruegeria. OX NCBI_TaxID=644076; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=TrichCH4B; RA Barbeau K., Mann E., Ferriera S., Johnson J., Kravitz S., Beeson K., RA Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.; RL Submitted (MAY-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG703521; EEW56487.1; -; Genomic_DNA. DR EnsemblBacteria; EEW56487; EEW56487; SCH4B_4810. DR PATRIC; 28610734; VBISilSp32447_4454. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 67 AA; 7545 MW; CD3C3E4031401D34 CRC64; MVLATGVVLP FIWTKSMVFF LIGLVAYPIL WFVADREPHF FEVLRVSYGS VRPTKNRSLH GGDSFGA // ID C9LWN4_SELS3 Unreviewed; 89 AA. AC C9LWN4; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 16-OCT-2013, entry version 14. DE SubName: Full=Type IV secretory pathway VirB3 family protein; DE SubName: Full=Uncharacterized protein; GN ORFNames=Selsp_0647, SELSPUOL_01889; OS Selenomonas sputigena (strain ATCC 35185 / DSM 20758 / VPI D19B-28). OC Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; OC Selenomonas. OX NCBI_TaxID=546271; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 35185; RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., RA Courtney L., Fronick C., Harrison M., Strong C., Farmer C., RA Delahaunty K., Markovic C., Hall O., Minx P., Tomlinson C., RA Mitreva M., Nelson J., Hou S., Wollam A., Pepin K.H., Johnson M., RA Bhonagiri V., Nash W.E., Warren W., Chinwalla A., Mardis E.R., RA Wilson R.K.; RL Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 35185, and ATCC 35185 / DSM 20758 / VPI D19B-28; RG US DOE Joint Genome Institute (JGI-PGF); RA Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S., RA Peters L., Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G., RA Teshima H., Detter J.C., Tapia R., Han C., Land M., Hauser L., RA Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Gronow S., RA Wellnitz S., Schneider S., Klenk H.-P., Eisen J.A.; RT "The complete genome of Selenomonas sputigena DSM 20758."; RL Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002637; AEB99616.1; -; Genomic_DNA. DR EMBL; ACKP02000044; EEX76782.1; -; Genomic_DNA. DR RefSeq; YP_004413076.1; NC_015437.1. DR EnsemblBacteria; AEB99616; AEB99616; Selsp_0647. DR EnsemblBacteria; EEX76782; EEX76782; SELSPUOL_01889. DR GeneID; 10496859; -. DR KEGG; ssg:Selsp_0647; -. DR PATRIC; 54550698; VBISelSpu203744_0657. DR KO; K03198; -. DR BioCyc; SSPU546271:GCBU-658-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 89 AA; 10646 MW; D19E3D16E4320BF1 CRC64; MEANREVPEG YEVPIHRALV QPLYWMGVPR NIFIGEIVFA VLGGLIFKTF TVIFITVAAH YLFRYLGQQD AQFHEVFWYS RLHKNYYYR // ID C9M9C3_9BACT Unreviewed; 104 AA. AC C9M9C3; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 03-APR-2013, entry version 5. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=GCWU000246_01604; OS Jonquetella anthropi E3_33 E1. OC Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; OC Jonquetella. OX NCBI_TaxID=645512; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=E3_33 E1; RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., RA Courtney L., Fronick C., Harrison M., Strong C., Farmer C., RA Delahaunty K., Markovic C., Hall O., Minx P., Tomlinson C., RA Mitreva M., Nelson J., Hou S., Wollam A., Pepin K.H., Johnson M., RA Bhonagiri V., Nash W.E., Warren W., Chinwalla A., Mardis E.R., RA Wilson R.K.; RL Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACOO02000035; EEX47767.1; -; Genomic_DNA. DR EnsemblBacteria; EEX47767; EEX47767; GCWU000246_01604. DR PATRIC; 27569107; VBIJonAnt83004_1176. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 104 AA; 11653 MW; 20B9CD66DE0EC8BC CRC64; MDLELEERAL RVAPIHKSLI RPQLIFGCDR VLFILSLLLT ILLIFPGGLG AGNYINVVLG IAFFIIAQRI LVVLAKAEPS SVSIFRRSIR YRGFYPATAL VERK // ID C9R3N2_AGGAD Unreviewed; 245 AA. AC C9R3N2; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 13-NOV-2013, entry version 16. DE SubName: Full=Type IV secretion system protein VirB4; GN OrderedLocusNames=D11S_1031; OS Aggregatibacter actinomycetemcomitans serotype C (strain D11S-1) OS (Actinobacillus actinomycetemcomitans). OC Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; OC Pasteurellaceae; Aggregatibacter. OX NCBI_TaxID=668336; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=D11S-1; RX PubMed=19820097; DOI=10.1128/JB.01203-09; RA Chen C., Kittichotirat W., Si Y., Bumgarner R.; RT "Genome sequence of Aggregatibacter actinomycetemcomitans serotype c RT strain D11S-1."; RL J. Bacteriol. 191:7378-7379(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001733; ACX82418.1; -; Genomic_DNA. DR RefSeq; YP_003255637.1; NC_013416.1. DR STRING; 668336.D11S_1031; -. DR EnsemblBacteria; ACX82418; ACX82418; D11S_1031. DR GeneID; 8536750; -. DR KEGG; aat:D11S_1031; -. DR PATRIC; 31912824; VBIAggAct139153_0968. DR eggNOG; COG3451; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; AACT668336:GJBF-1030-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 245 AA; 28486 MW; 9DE41FFFB9C7ABBE CRC64; MNRDPLFKAL TRPAMFLGVP LTPFFLTFAS FLLFAIYTKI YYFIFFLPAF GALRLISSYD EKIFQLYGIR MWLMPARLKA AKFKRLFGGN YYTGSNFARN IYRKKPISDK GDYTMLDLEK AISLEKIIPY SSQIDEDVIL TKDGIFTTTF EVEGISYETR GDDELDRFKL SLNILIRSLA QDNISIYVNS VRRFSDLKSD NQFDNGFAKD INEKYVTSFS KSDFMENNLF FTVALKPYRG LIKSM // ID C9SZR5_9RHIZ Unreviewed; 116 AA. AC C9SZR5; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 03-APR-2013, entry version 5. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BAIG_00150; OS Brucella ceti M644/93/1. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=520459; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=M644/93/1; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Whatmore A.M., RA Perrett L.L., O'Callaghan D., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Brucella ceti M644/93/1."; RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS999669; EEX95762.1; -; Genomic_DNA. DR EnsemblBacteria; EEX95762; EEX95762; BAIG_00150. DR PATRIC; 24220916; VBIBruCet111375_0586. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13109 MW; 0589856E0D86BDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGNIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID C9T911_9RHIZ Unreviewed; 116 AA. AC C9T911; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 03-APR-2013, entry version 5. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BAJG_00153; OS Brucella ceti M13/05/1. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=520460; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=M13/05/1; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Whatmore A.M., RA Perrett L.L., O'Callaghan D., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Brucella ceti M13/05/1."; RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS999686; EEX88365.1; -; Genomic_DNA. DR EnsemblBacteria; EEX88365; EEX88365; BAJG_00153. DR PATRIC; 24207030; VBIBruCet83544_1094. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13109 MW; 0589856E0D86BDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGNIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID C9TI42_9RHIZ Unreviewed; 116 AA. AC C9TI42; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 13-NOV-2013, entry version 6. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BAGG_00979; OS Brucella pinnipedialis M163/99/10. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=520463; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=M163/99/10; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Whatmore A.M., RA Perrett L.L., O'Callaghan D., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Brucella pinnipedialis M163/99/10."; RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS999750; EEY06342.1; -; Genomic_DNA. DR ProteinModelPortal; C9TI42; -. DR EnsemblBacteria; EEY06342; EEY06342; BAGG_00979. DR PATRIC; 24257793; VBIBruPin128057_0053. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID C9U089_BRUPB Unreviewed; 116 AA. AC C9U089; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 16-APR-2014, entry version 12. DE SubName: Full=Type IV secretion system protein VirB3; DE SubName: Full=Type IV secretion system protein virB3; GN Name=virB3; OrderedLocusNames=BPI_II69; ORFNames=BAHG_02036; OS Brucella pinnipedialis (strain NCTC 12890 / BCCN 94-73 / B2/94). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=520461; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=B2/94; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Whatmore A.M., RA Perrett L.L., O'Callaghan D., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Brucella pinnipedialis B2/94."; RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=B2/94; RA Zygmunt M., Clockaert A.; RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases. RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=B2/94, and NCTC 12890 / BCCN 94-73 / B2/94; RX PubMed=21745361; DOI=10.1186/1471-2148-11-200; RA Audic S., Lescot M., Claverie J.M., Cloeckaert A., Zygmunt M.S.; RT "The genome sequence of Brucella pinnipedialis B2/94 sheds light on RT the evolutionary history of the genus Brucella."; RL BMC Evol. Biol. 11:200-200(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002079; AEK55529.1; -; Genomic_DNA. DR EMBL; DS999851; EEY01660.1; -; Genomic_DNA. DR RefSeq; YP_004757297.1; NC_015858.1. DR EnsemblBacteria; AEK55529; AEK55529; BPI_II69. DR EnsemblBacteria; EEY01660; EEY01660; BAHG_02036. DR GeneID; 10995284; -. DR KEGG; bpp:BPI_II69; -. DR PATRIC; 24254699; VBIBruPin17457_2938. DR KO; K03198; -. DR BioCyc; BPIN520461:GJF0-2309-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID C9U7Y8_BRUAO Unreviewed; 116 AA. AC C9U7Y8; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 13-NOV-2013, entry version 9. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BAAG_00962; OS Brucella abortus bv. 6 str. 870. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=520454; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=870; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Whatmore A.M., RA Perrett L.L., O'Callaghan D., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Brucella abortus bv. 6 str. 870."; RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS999869; EEX64039.1; -; Genomic_DNA. DR ProteinModelPortal; C9U7Y8; -. DR EnsemblBacteria; EEX64039; EEX64039; BAAG_00962. DR PATRIC; 24192482; VBIBruAbo118911_2526. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID C9UHU3_BRUAO Unreviewed; 116 AA. AC C9UHU3; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 13-NOV-2013, entry version 9. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BABG_00148; OS Brucella abortus bv. 4 str. 292. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=520452; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=292; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Whatmore A.M., RA Perrett L.L., O'Callaghan D., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Brucella abortus bv. 4 str. 292."; RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS999881; EEX56778.1; -; Genomic_DNA. DR ProteinModelPortal; C9UHU3; -. DR EnsemblBacteria; EEX56778; EEX56778; BABG_00148. DR PATRIC; 24183732; VBIBruAbo93713_2408. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID C9USI8_BRUAO Unreviewed; 116 AA. AC C9USI8; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 13-NOV-2013, entry version 9. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BACG_00153; OS Brucella abortus bv. 3 str. Tulya. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=520451; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Tulya; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Whatmore A.M., RA Perrett L.L., O'Callaghan D., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Brucella abortus bv. 3 str. Tulya."; RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS999893; EEX84044.1; -; Genomic_DNA. DR ProteinModelPortal; C9USI8; -. DR EnsemblBacteria; EEX84044; EEX84044; BACG_00153. DR PATRIC; 24176630; VBIBruAbo20544_2808. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID C9V0T9_BRUAO Unreviewed; 88 AA. AC C9V0T9; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 03-APR-2013, entry version 6. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BADG_02044; OS Brucella abortus bv. 2 str. 86/8/59. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=520450; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=86/8/59; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Whatmore A.M., RA Perrett L.L., O'Callaghan D., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Brucella abortus bv. 2 str. 86/8/59."; RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS999911; EEX60006.1; -; Genomic_DNA. DR EnsemblBacteria; EEX60006; EEX60006; BADG_02044. DR PATRIC; 24169406; VBIBruAbo60950_3477. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 88 AA; 10116 MW; 85B4A89B345A8CDF CRC64; MLFGVPVIPL VIVGGSIVLL SVWISMFILP LIVPIVLVMR QITQTDDQMF RLLGLKAQFR LIHFNRTGRF WRASAYSPIA FTKRKRES // ID C9V742_BRUNE Unreviewed; 116 AA. AC C9V742; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 13-NOV-2013, entry version 6. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BANG_02865; OS Brucella neotomae 5K33. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=520456; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=5K33; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Whatmore A.M., RA Perrett L.L., O'Callaghan D., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Brucella neotomae 5K33."; RL Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EQ999575; EEY03134.1; -; Genomic_DNA. DR ProteinModelPortal; C9V742; -. DR EnsemblBacteria; EEY03134; EEY03134; BANG_02865. DR PATRIC; 24243813; VBIBruNeo114381_0592. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID C9VDX4_9RHIZ Unreviewed; 116 AA. AC C9VDX4; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 13-NOV-2013, entry version 6. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BAQG_01993; OS Brucella ceti B1/94. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=520457; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=B1/94; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Whatmore A.M., RA Perrett L.L., O'Callaghan D., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Brucella ceti B1/94."; RL Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EQ999619; EEX85176.1; -; Genomic_DNA. DR ProteinModelPortal; C9VDX4; -. DR EnsemblBacteria; EEX85176; EEX85176; BAQG_01993. DR PATRIC; 24200110; VBIBruCet113143_0481. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID C9VNS3_BRUAO Unreviewed; 116 AA. AC C9VNS3; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 13-NOV-2013, entry version 9. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BARG_00946; OS Brucella abortus bv. 9 str. C68. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=520455; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=C68; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Whatmore A.M., RA Perrett L.L., O'Callaghan D., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Brucella abortus bv. 9 str. C68."; RL Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EQ999630; EEX79516.1; -; Genomic_DNA. DR ProteinModelPortal; C9VNS3; -. DR EnsemblBacteria; EEX79516; EEX79516; BARG_00946. DR PATRIC; 24194875; VBIBruAbo122389_0264. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID C9W983_9RICK Unreviewed; 98 AA. AC C9W983; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Aleochara bilineata. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=502348; RN [1] RP NUCLEOTIDE SEQUENCE. RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223232; ACO52098.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10942 MW; 1342D243F61C69DB CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INSNDLRVIL LMLPGMHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIA // ID C9W984_9RICK Unreviewed; 98 AA. AC C9W984; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Delia radicum. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=502352; RN [1] RP NUCLEOTIDE SEQUENCE. RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223233; ACO52099.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10928 MW; 1355D92E57CC69DB CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INSNDLRVVL LMLPGMHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIA // ID C9W985_9RICK Unreviewed; 98 AA. AC C9W985; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Drosophila simulans. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=77038; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=WAu; RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223234; ACO52100.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10952 MW; 1342D706E24876CB CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INSNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GVNSYDIA // ID C9W986_9RICK Unreviewed; 98 AA. AC C9W986; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Drosophila yakuba. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=260915; RN [1] RP NUCLEOTIDE SEQUENCE. RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223235; ACO52101.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10950 MW; 135EBB76FE3869CE CRC64; MSTGSIQTDQ LFKGLTRPPM LFGVSYMFAI LNVLICMLIF INSNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIA // ID C9W987_9RICK Unreviewed; 98 AA. AC C9W987; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Pachycrepoideus dubius. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=502355; RN [1] RP NUCLEOTIDE SEQUENCE. RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223236; ACO52102.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10942 MW; 1342D243F61C69DB CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INSNDLRVIL LMLPGMHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIA // ID C9W988_9RICK Unreviewed; 98 AA. AC C9W988; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Armadillidium album. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=118715; RN [1] RP NUCLEOTIDE SEQUENCE. RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223237; ACO52103.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10982 MW; 7832D001E65869DE CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INTNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANTYDIT // ID C9W989_9RICK Unreviewed; 98 AA. AC C9W989; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Armadillidium nasatum. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=118716; RN [1] RP NUCLEOTIDE SEQUENCE. RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223238; ACO52104.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10982 MW; 7832D001E65869DE CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INTNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANTYDIT // ID C9W992_9RICK Unreviewed; 98 AA. AC C9W992; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Chaetophiloscia elongata. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=118727; RN [1] RP NUCLEOTIDE SEQUENCE. RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223241; ACO52107.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10982 MW; 7832D001E65869DE CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INTNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANTYDIT // ID C9W993_9RICK Unreviewed; 98 AA. AC C9W993; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Cylisticus convexus. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=118728; RN [1] RP NUCLEOTIDE SEQUENCE. RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223242; ACO52108.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10968 MW; 7832D001E24869DE CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INTNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIT // ID C9W994_9RICK Unreviewed; 98 AA. AC C9W994; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Drosophila sechellia. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=375925; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=WSn; RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223243; ACO52109.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10967 MW; 78387A0B42E26374 CRC64; MSTGSIQTNQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INTNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIT // ID C9W995_9RICK Unreviewed; 98 AA. AC C9W995; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Helleria brevicornis. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=118725; RN [1] RP NUCLEOTIDE SEQUENCE. RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223244; ACO52110.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10968 MW; 7832D001E24869DE CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INTNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIT // ID C9W996_9RICK Unreviewed; 98 AA. AC C9W996; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Ligia oceanica. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=118726; RN [1] RP NUCLEOTIDE SEQUENCE. RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223245; ACO52111.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10968 MW; 7832D001E24869DE CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INTNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIT // ID C9W997_9RICK Unreviewed; 98 AA. AC C9W997; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Oniscus asellus. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=118717; RN [1] RP NUCLEOTIDE SEQUENCE. RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223246; ACO52112.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10968 MW; 7832D001E24869DE CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INTNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIT // ID C9W998_9RICK Unreviewed; 98 AA. AC C9W998; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Philoscia muscorum. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=502357; RN [1] RP NUCLEOTIDE SEQUENCE. RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223247; ACO52113.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10982 MW; 7832D001E65869DE CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INTNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANTYDIT // ID C9W999_9RICK Unreviewed; 98 AA. AC C9W999; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Porcellio dilatatus petiti. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=322706; RN [1] RP NUCLEOTIDE SEQUENCE. RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223248; ACO52114.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10982 MW; 7832D001E65869DE CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INTNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANTYDIT // ID C9W9A0_9RICK Unreviewed; 98 AA. AC C9W9A0; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Porcellio dispar. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=632085; RN [1] RP NUCLEOTIDE SEQUENCE. RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223249; ACO52115.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10968 MW; 7832D001E24869DE CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INTNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIT // ID C9W9A1_9RICK Unreviewed; 98 AA. AC C9W9A1; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Porcellio scaber. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=118723; RN [1] RP NUCLEOTIDE SEQUENCE. RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223250; ACO52116.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10968 MW; 7832D001E24869DE CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INTNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIT // ID C9W9A2_9RICK Unreviewed; 98 AA. AC C9W9A2; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Porcellio variabilis. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=632086; RN [1] RP NUCLEOTIDE SEQUENCE. RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223251; ACO52117.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10968 MW; 7832D001E24869DE CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INTNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIT // ID C9W9A3_9RICK Unreviewed; 98 AA. AC C9W9A3; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Porcellionides pruinosus. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=194495; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=WPruIII; RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223252; ACO52118.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10967 MW; 78387A0B42E26374 CRC64; MSTGSIQTNQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INTNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIT // ID C9W9A4_9RICK Unreviewed; 98 AA. AC C9W9A4; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Sphaeroma hookeri. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=118718; RN [1] RP NUCLEOTIDE SEQUENCE. RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223253; ACO52119.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10967 MW; 78387A0B42E26374 CRC64; MSTGSIQTNQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INTNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIT // ID C9W9A5_9RICK Unreviewed; 98 AA. AC C9W9A5; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Sphaeroma rugicauda. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=118719; RN [1] RP NUCLEOTIDE SEQUENCE. RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223254; ACO52120.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10968 MW; 7832D001E24869DE CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INTNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIT // ID C9W9A6_9RICK Unreviewed; 98 AA. AC C9W9A6; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Dysdera erythrina. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=118731; RN [1] RP NUCLEOTIDE SEQUENCE. RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223255; ACO52121.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10924 MW; 1342D706E24869DB CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INSNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIA // ID C9W9A7_9RICK Unreviewed; 98 AA. AC C9W9A7; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Musca domestica. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=632088; RN [1] RP NUCLEOTIDE SEQUENCE. RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223256; ACO52122.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10906 MW; 12F36706E24968DB CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICLLIF INSNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIA // ID C9W9A8_9RICK Unreviewed; 98 AA. AC C9W9A8; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 08-MAR-2011, entry version 4. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Segestria florentina. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=502360; RN [1] RP NUCLEOTIDE SEQUENCE. RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ223257; ACO52123.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10964 MW; 8822C01F02A665B3 CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INTNDLRVIL LVLPGIHGLG YIVSAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIT // ID C9Y5P9_CROTZ Unreviewed; 907 AA. AC C9Y5P9; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 16-APR-2014, entry version 24. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=Ctu_2p00210; OS Cronobacter turicensis (strain DSM 18703 / LMG 23827 / z3032). OG Plasmid pCTU2. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Cronobacter. OX NCBI_TaxID=693216; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 18703 / LMG 23827 / z3032; RA Tischler P., Lehner A., Rattei T., Stephan R.; RT "The complete genome sequence of Cronobacter turicensis."; RL Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FN543095; CBA34694.1; -; Genomic_DNA. DR RefSeq; YP_003212733.1; NC_013284.1. DR STRING; 413502.Ctu_2p00210; -. DR EnsemblBacteria; CBA34694; CBA34694; Ctu_2p00210. DR GeneID; 8458399; -. DR KEGG; ctu:Ctu_2p00210; -. DR PATRIC; 20409139; VBICroTur2449_4117. DR HOGENOM; HOG000119263; -. DR KO; K03199; -. DR OMA; FIAMRAM; -. DR OrthoDB; EOG6HMX9P; -. DR BioCyc; CTUR693216:GI0P-4551-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 907 AA; 102787 MW; CE19ECF0ED269600 CRC64; MKRPAALWGV PMVPLLGVTG VTIIVAIWTS VSLLLLLPVE FLVMKSLTRN EPMRFNLIAV WLRARGKPVA NRLFGATTFM PVEHEPVDIT EFIDAMKLNQ SATIRKYIPY SSHIHPNVIR SPKSDLYCTW EVMGTPFDCE SEETLQIGTN QLHGLIRSFE GLPVTFYVHN IREQFTDSLH KESGNPYADK ISELYYASLK DAPFRRNRLF ITVCFRPFVG LEKAERKRMK DTEKLKELDG ALQEMLEIKS TLDTAFSRYG ARSLGTFTEG KAVYSSQLAF YEYLLTHQWR RVRVTRTPAY DVMGAAALFF SAESGQINHV SGTSYFRGLE VKEFSEETGT GMMDSLLYAP CDYVITQSYT CMSREEAKKA IKRTRRLLMS SDDDAISQRL DLDVALDLLT SGKIAYGKHH FSIMVHSPTL DSLVADTNEI SNALNNIGIT PVPAEISLSA AYMAQLPGNY NLRPRKGELS SQNFVELAAL HNFYPGKRDR APWGDAMALL RTPSGDGYYL NLHNTLADKD EFDEKNPAST CILGTNGSGK TMLMTFLENM QQKYRRADSF SPDARTKRLT TVYLDKDRGA EMNIRALGGR YYRVISGERT GWNPFSLPAT KRNINFIKQL MKILCTRNGS TITPRDEQRL SVAVDAVMSN EPEYRLFGIT RLRENLPEPA TKEAQENGLD IRLSQWAQGG EFGWVFDNES DTFDISNCDN FGIDGTEFLD DANVCAPISF YLLYRITSLL DGRRLVIYMD EFWKWLRDPV FKDFAYNKLK TIRKLNGFLV VGTQSPHEII KDDIAPAVIE QCGTQILAAN PSADRSHYVD GMKFEPEVFD VVKGLDPQAR QYVVVKNQFR RGDTKRFAAR VTLDLSGIGR YTKVMSGDAP NLEIFESIYR EGMQPHEWLD TYMAKAL // ID D0AAY7_9RHIZ Unreviewed; 102 AA. AC D0AAY7; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 05-OCT-2010, entry version 4. DE SubName: Full=TrwM component of type IV secretion system; GN Name=trwM; OS Bartonella birtlesii. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=111504; RN [1] RP NUCLEOTIDE SEQUENCE. RX PubMed=20548954; DOI=10.1371/journal.ppat.1000946; RA Vayssier-Taussat M., Le Rhun D., Deng H.K., Biville F., Cescau S., RA Danchin A., Marignac G., Lenaour E., Boulouis H.J., Mavris M., RA Arnaud L., Yang H., Wang J., Quebatte M., Engel P., Saenz H., RA Dehio C.; RT "The Trw type IV secretion system of Bartonella mediates host-specific RT adhesion to erythrocytes."; RL PLoS Pathog. 6:e1000946-e1000946(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FN555106; CBG76048.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 102 AA; 12117 MW; AB4A2E6D097B64E7 CRC64; MKPQQHEAFP LFKGATRVPT VWGVPMMPFI VMVISVAVVA MMINIFLWVI APPLWFIMIQ ITKNDDKAFR IWWLWIDTKL RNRNKSFWGA SSYSPSDYRK RR // ID D0AVD7_BRUAO Unreviewed; 88 AA. AC D0AVD7; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 03-APR-2013, entry version 6. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BAUG_0140; OS Brucella abortus NCTC 8038. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=575591; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NCTC 8038; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Sangari F.J., RA Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Brucella abortus NCTC 8038."; RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG703762; EEW81407.1; -; Genomic_DNA. DR EnsemblBacteria; EEW81407; EEW81407; BAUG_0140. DR PATRIC; 24157556; VBIBruAbo97623_0160. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 88 AA; 10116 MW; 85B4A89B345A8CDF CRC64; MLFGVPVIPL VIVGGSIVLL SVWISMFILP LIVPIVLVMR QITQTDDQMF RLLGLKAQFR LIHFNRTGRF WRASAYSPIA FTKRKRES // ID D0B5R9_BRUME Unreviewed; 88 AA. AC D0B5R9; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 03-APR-2013, entry version 9. DE SubName: Full=Type IV secretory pathway; GN ORFNames=BAWG_1440; OS Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=224914; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=16M; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Whatmore A.M., RA Perrett L.L., O'Callaghan D., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Brucella melitensis bv. 1 str. 16M."; RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG703779; EEW86961.1; -; Genomic_DNA. DR EnsemblBacteria; EEW86961; EEW86961; BAWG_1440. DR PATRIC; 17798621; VBIBruMel146950_1654. DR eggNOG; COG3702; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 88 AA; 10116 MW; 85B4A89B345A8CDF CRC64; MLFGVPVIPL VIVGGSIVLL SVWISMFILP LIVPIVLVMR QITQTDDQMF RLLGLKAQFR LIHFNRTGRF WRASAYSPIA FTKRKRES // ID D0BI71_BRUSS Unreviewed; 88 AA. AC D0BI71; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 03-APR-2013, entry version 6. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BAVG_2709; OS Brucella suis bv. 4 str. 40. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=520488; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=40; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Whatmore A.M., RA Perrett L.L., O'Callaghan D., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Brucella suis bv. 4 str. 40."; RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG703794; EEW90339.1; -; Genomic_DNA. DR EnsemblBacteria; EEW90339; EEW90339; BAVG_2709. DR PATRIC; 24296403; VBIBruSui38587_2227. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 88 AA; 10116 MW; 85B4A89B345A8CDF CRC64; MLFGVPVIPL VIVGGSIVLL SVWISMFILP LIVPIVLVMR QITQTDDQMF RLLGLKAQFR LIHFNRTGRF WRASAYSPIA FTKRKRES // ID D0BTC8_FUSNU Unreviewed; 88 AA. AC D0BTC8; DT 24-NOV-2009, integrated into UniProtKB/TrEMBL. DT 24-NOV-2009, sequence version 1. DT 13-NOV-2013, entry version 7. DE SubName: Full=Uncharacterized protein; GN ORFNames=HMPREF0406_01512; OS Fusobacterium nucleatum subsp. animalis 3_1_33. OC Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; OC Fusobacterium. OX NCBI_TaxID=469603; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=3_1_33; RG The Broad Institute Genome Sequencing Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Strauss J., Ambrose C.E., RA Allen-Vercoe E., Walker B., Young S.K., Zeng Q., Gargeya S., RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M., RA Berlin A.M., Chapman S.B., Goldberg J., Griggs A., Gujja S., RA Hansen M., Howarth C., Imamovic A., Larimer J., McCowen C., RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., RA Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J., RA Nusbaum C., Birren B.; RT "The Genome Sequence of Fusobacterium sp. 3_1_33."; RL Submitted (JUN-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACQE02000003; EEW94473.1; -; Genomic_DNA. DR EnsemblBacteria; EEW94473; EEW94473; HMPREF0406_01512. DR PATRIC; 30285680; VBIFusSp21658_1542. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 88 AA; 10297 MW; 430E7EB70002BEBD CRC64; MEEELDGFQV PVCQGLVKPI TILGISREAM ILNVATAAIF VLSLRLYYLF WVFFITHYLL FRACKKDPEV INIFLKKYIR QLDYYGEG // ID D0G947_BRUML Unreviewed; 128 AA. AC D0G947; DT 15-DEC-2009, integrated into UniProtKB/TrEMBL. DT 15-DEC-2009, sequence version 1. DT 03-APR-2013, entry version 5. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BASG_00683; OS Brucella melitensis bv. 2 str. 63/9. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=520465; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=63/9; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Whatmore A.M., RA Perrett L.L., O'Callaghan D., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Brucella melitensis bv. 2 str. 63/9."; RL Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACEM01000001; EEZ15865.1; -; Genomic_DNA. DR EnsemblBacteria; EEZ15865; EEZ15865; BASG_00683. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 128 AA; 14325 MW; 3ACAC4A8D323E77D CRC64; MPLTCLGKGT QIMTTAPQES NARSAGYRGD PIFKGCTRPA MLFGVPVIPL VIVGGSIVLL SVWISMFILP LIVPIVLVMR QITQTDDQMF RLLGLKAQFR LIHFNRTGRF WRASAYSPIA FTKRKRES // ID D0L173_HALNC Unreviewed; 98 AA. AC D0L173; DT 15-DEC-2009, integrated into UniProtKB/TrEMBL. DT 15-DEC-2009, sequence version 1. DT 14-MAY-2014, entry version 19. DE SubName: Full=Conjugal transfer TrbD family protein; GN OrderedLocusNames=Hneap_1618; OS Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus OS neapolitanus). OC Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; OC Halothiobacillaceae; Halothiobacillus. OX NCBI_TaxID=555778; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 23641 / c2; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., RA Bruce D., Goodwin L., Pitluck S., Davenport K., Brettin T., RA Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., RA Kyrpides N., Mikhailova N., Kerfeld C., Cannon G., Heinhort S.; RT "Complete sequence of Halothiobacillus neapolitanus c2."; RL Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001801; ACX96446.1; -; Genomic_DNA. DR RefSeq; YP_003263493.1; NC_013422.1. DR STRING; 555778.Hneap_1618; -. DR EnsemblBacteria; ACX96446; ACX96446; Hneap_1618. DR GeneID; 8534776; -. DR KEGG; hna:Hneap_1618; -. DR PATRIC; 32207160; VBIHalNea120669_1645. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; AKSDPYM; -. DR OrthoDB; EOG6FZ4KH; -. DR BioCyc; HNEA555778:GIVV-1664-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 98 AA; 10919 MW; 8A65FB28B8CC5391 CRC64; MSEENAHRTI PIHTSFNRAH LLLGAERELT LLTVLIVALV VASGMNPLSF GVGALLWVIM LGIVIRMAKA DTMLSKVYFK HVKYRAYYPA KSGAYTRN // ID D0P5F7_BRUSS Unreviewed; 116 AA. AC D0P5F7; DT 15-DEC-2009, integrated into UniProtKB/TrEMBL. DT 15-DEC-2009, sequence version 1. DT 03-APR-2013, entry version 6. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BAEG_02052; OS Brucella suis bv. 5 str. 513. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=520489; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=513; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Whatmore A.M., RA Perrett L.L., O'Callaghan D., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Brucella suis bv. 5 str. 513."; RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS999712; EEY27511.1; -; Genomic_DNA. DR EnsemblBacteria; EEY27511; EEY27511; BAEG_02052. DR PATRIC; 24297541; VBIBruSui73489_0981. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13066 MW; 1FBAAC617EAFA899 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVPVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID D0PEE2_BRUSS Unreviewed; 88 AA. AC D0PEE2; DT 15-DEC-2009, integrated into UniProtKB/TrEMBL. DT 15-DEC-2009, sequence version 1. DT 03-APR-2013, entry version 5. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BAFG_00149; OS Brucella suis bv. 3 str. 686. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=520487; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=686; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Whatmore A.M., RA Perrett L.L., O'Callaghan D., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Brucella suis bv. 3 str. 686."; RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS999731; EEY30753.1; -; Genomic_DNA. DR EnsemblBacteria; EEY30753; EEY30753; BAFG_00149. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 88 AA; 10116 MW; 85B4A89B345A8CDF CRC64; MLFGVPVIPL VIVGGSIVLL SVWISMFILP LIVPIVLVMR QITQTDDQMF RLLGLKAQFR LIHFNRTGRF WRASAYSPIA FTKRKRES // ID D0QMP8_ECOLX Unreviewed; 917 AA. AC D0QMP8; DT 15-DEC-2009, integrated into UniProtKB/TrEMBL. DT 15-DEC-2009, sequence version 1. DT 16-APR-2014, entry version 10. DE SubName: Full=PilX3-4; DE SubName: Full=Putative conjugal transfer protein; GN Name=pilX3-4; Synonyms=pilX4; ORFNames=pMAS2027_44; OS Escherichia coli. OG Plasmid pMAS2027, and Plasmid pSYM1. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=562; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MS2027; PLASMID=pMAS2027; RX PubMed=19717626; DOI=10.1128/AEM.00974-09; RA Ong C.L., Beatson S.A., McEwan A.G., Schembri M.A.; RT "Conjugative plasmid transfer and adhesion dynamics in an Escherichia RT coli biofilm."; RL Appl. Environ. Microbiol. 75:6783-6791(2009). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MS2027; PLASMID=pMAS2027; RA Ong C.-L.Y., Beatson S.A., McEwan A.G., Schembri M.A.; RL Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases. RN [3] RP NUCLEOTIDE SEQUENCE. RC STRAIN=G3/10; PLASMID=pSYM1; RA Zschuettig A., Zimmermann K., Goesmann A., Blom J., Gunzer F.; RL Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases. RN [4] RP NUCLEOTIDE SEQUENCE. RC STRAIN=G3/10; PLASMID=pSYM1; RX PubMed=22479389; DOI=10.1371/journal.pone.0033351; RA Zschuttig A., Zimmermann K., Blom J., Goesmann A., Pohlmann C., RA Gunzer F.; RT "Identification and Characterization of Microcin S, a New RT Antibacterial Peptide Produced by Probiotic Escherichia coli G3/10."; RL PLoS ONE 7:E33351-E33351(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FJ666132; ACV89911.1; -; Genomic_DNA. DR EMBL; JN887338; AFH37388.1; -; Genomic_DNA. DR RefSeq; YP_003292204.1; NC_013503.1. DR RefSeq; YP_006954566.1; NC_019013.1. DR GeneID; 13907157; -. DR GeneID; 8569632; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 917 AA; 104993 MW; D64A038DAAA97CED CRC64; MSTLFKGLTR PALIRGLGVP LYPFLGMCII CVLLGVWIHE AMYALILPGW YAIRRVTQFD ERFFDLLYLR TLVKGHSLSN KRFSAVHYAG SQYDEVDISK VDNFMKLKDQ SSVEELIPYS SHITDNIIVT KNRDLLATWQ IDGAYFECVD SEDLSILTDQ LNTLIRSFEG KSVTLYPHRI RCKKDVRPVF NSKIPFVNRV MNDYYESFPQ SEFFENKLFL TICFKPFTTE DKVTHFFSRG KKQKDIFKEP VNEMNEICDR LNTYLSRFHS RRLGLYEDHG VVYSDQLSLF QYLLSGRWQK VRVSSSPFYT YLGGKDLFFG NDAGQITASD HARYFRCIEI KDYFQETDAG ILDALMYLPV EYVVTSSFTA MDKQSAIKAL DDQIDKLEMT DDAAKSLLAD LKVGLDMVSS GYISFGKSHQ TLVVFADSPE RLVKDTNIVT STLEDLGLIV TYSTLSLGAA YFAQLPGNYT LRPRLSTLSS LNFAEMESFH NFFSGKEKGN TWGEKLITLR GSGNDIYHLN YHMTTEHQNF FGKNPTLGHT EILGTSNVGK TVLLMTKAFA AQQFGTPESF PANRKLKKLT TVFFDKDRAG EVGIRAMGGS YYRVKEGEPT GWNPAALPPT KRNIAFMKDL VRLLCTLNSE PLDDYQNSLI SDAVERLMQR SDRSYPISKL RPLIQEPDDT ETKRHGLKAR LKPWTQGEEF GWVFDNREDT FDVDNLDVFG IDGTEFLDNK VLASAASFYL IYRVTMLADG RRLLIYMDEF WQWINNEAFR DFVYNKLKTG RKLDMVLVVA TQSPDELIKS PIAAAVREQC ATHIYLANPK AKRSEYVDGL QVRELYFDKI KAIDPLSRQF LVVKNPQRKG ESDDFAAFAR LELGKAAYYL PVLSASKPQL ELFDDIWKEG MKPEEWLDTY LEQANLI // ID D0RCP5_9RHIZ Unreviewed; 116 AA. AC D0RCP5; DT 15-DEC-2009, integrated into UniProtKB/TrEMBL. DT 15-DEC-2009, sequence version 1. DT 13-NOV-2013, entry version 6. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BATG_00148; OS Brucella sp. F5/99. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=437701; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=F5/99; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Whatmore A.M., RA Perrett L.L., O'Callaghan D., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Brucella sp. F5/99."; RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG663472; EEY24280.1; -; Genomic_DNA. DR ProteinModelPortal; D0RCP5; -. DR EnsemblBacteria; EEY24280; EEY24280; BATG_00148. DR PATRIC; 24276553; VBIBruSp65954_0155. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID D0T000_ACILW Unreviewed; 108 AA. AC D0T000; DT 15-DEC-2009, integrated into UniProtKB/TrEMBL. DT 15-DEC-2009, sequence version 1. DT 18-SEP-2013, entry version 6. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=HMPREF0017_02874; OS Acinetobacter lwoffii SH145. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Moraxellaceae; Acinetobacter. OX NCBI_TaxID=575588; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=SH145; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Feldgarden M., Earl A., Young S.K., Zeng Q., Koehrsen M., RA Alvarado L., Berlin A., Bochicchio J., Borenstein D., Chapman S., RA Chen Z., Engels R., Freedman E., Gellesch M., Goldberg J., Griggs A., RA Gujja S., Heilman E., Heiman D., Hepburn T., Howarth C., Jen D., RA Larson L., Lewis B., Mehta T., Park D., Pearson M., Roberts A., RA Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., Thomson T., RA Walk T., White J., Yandava C., Seifert H., Haas B., Nusbaum C., RA Birren B.; RT "The Genome Sequence of Acinetobacter lwoffii strain SH145."; RL Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG705071; EEY88464.1; -; Genomic_DNA. DR EnsemblBacteria; EEY88464; EEY88464; HMPREF0017_02874. DR PATRIC; 35618185; VBIAciLwo61775_2841. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 108 AA; 12529 MW; 8B049B4181D31A20 CRC64; MSIAQLAKLR VENMSELRHT GINRSLHRPN LMAGGERIPV LLVGLITFAL IAAIKTLPSI VIGIILWFVS MYFLRRMAKF DPYASEIYRR QLKQQKIYQP KSRPFRTE // ID D0TSN4_9BACE Unreviewed; 98 AA. AC D0TSN4; DT 15-DEC-2009, integrated into UniProtKB/TrEMBL. DT 15-DEC-2009, sequence version 1. DT 18-SEP-2013, entry version 7. DE SubName: Full=Uncharacterized protein; GN ORFNames=HMPREF0102_02172; OS Bacteroides sp. 2_1_22. OC Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; OC Bacteroides. OX NCBI_TaxID=469588; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=2_1_22; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Feldgarden M., Earl A., Young S.K., Zeng Q., Koehrsen M., RA Alvarado L., Berlin A., Bochicchio J., Borenstein D., Chapman S., RA Chen Z., Engels R., Freedman E., Gellesch M., Goldberg J., Griggs A., RA Gujja S., Heilman E., Heiman D., Hepburn T., Howarth C., Jen D., RA Larson L., Lewis B., Mehta T., Park D., Pearson M., Roberts A., RA Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., Thomson T., RA Walk T., White J., Yandava C., McDonald J., Allen-Vercoe E., RA Strauss J., Ambrose C., Haas B., Nusbaum C., Birren B.; RT "The Genome Sequence of Bacteroides sp. strain 2_1_22."; RL Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG705175; EEZ03110.1; -; Genomic_DNA. DR EnsemblBacteria; EEZ03110; EEZ03110; HMPREF0102_02172. DR PATRIC; 35638156; VBIBacSp133744_2156. PE 4: Predicted; SQ SEQUENCE 98 AA; 11036 MW; B18F7EC3843A9493 CRC64; MNGKEEHYPD YPLFKGLQRP LEFMGIQGRY IYWAAATIGI AIVGFIIAYC MAGFVLALIV LSVTVTSGVG LILFKQRKGL HSKRLERGVF IYAYSKKM // ID D0UIP4_AGGAD Unreviewed; 927 AA. AC D0UIP4; DT 15-DEC-2009, integrated into UniProtKB/TrEMBL. DT 15-DEC-2009, sequence version 1. DT 16-APR-2014, entry version 21. DE SubName: Full=ATPase; GN ORFNames=D11S_2282; OS Aggregatibacter actinomycetemcomitans serotype C (strain D11S-1) OS (Actinobacillus actinomycetemcomitans). OG Plasmid S25. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; OC Pasteurellaceae; Aggregatibacter. OX NCBI_TaxID=668336; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=D11S-1; PLASMID=S25; RX PubMed=19820097; DOI=10.1128/JB.01203-09; RA Chen C., Kittichotirat W., Si Y., Bumgarner R.; RT "Genome sequence of Aggregatibacter actinomycetemcomitans serotype c RT strain D11S-1."; RL J. Bacteriol. 191:7378-7379(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GQ866234; ACX80355.1; -; Genomic_DNA. DR RefSeq; YP_003264489.1; NC_013438.1. DR EnsemblBacteria; ACX80355; ACX80355; D11S_2282. DR GeneID; 8537963; -. DR KEGG; aat:D11S_2282; -. DR HOGENOM; HOG000119263; -. DR KO; K03199; -. DR BioCyc; AACT668336:GJBF-2279-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR003593; AAA+_ATPase. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SMART; SM00382; AAA; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 927 AA; 105848 MW; A4052FAD0B279E52 CRC64; MISKDPLFKA LTRPAMFLGV PLVPFFMAFA VCILFAIYTE VRYFIFFFPL FGVLRLITKI DEKIFQLYGI KRYLIGLRIR ASGFKKLFYG TYYTSQDFSK ERVKKTSVSD KGDYTVLDLE KAIPLKKIIP YSSLISEDVV LSKDGIYSAT WEIEGISYET RNDEDIDRYK NSLNTLIRSL ATENISIYTH NARLFSTLKS NHTFKDGFAK DVNDTYVQSF KDIDFMENSL FFTICYNPKK GLDKINKKAQ SKDERLEDIE LNLQHFNEIA NRVGNALDKF GANRLTTYEK YDVMYSQQLE FYNFILTGNY QPVRVLNYPI YSYLGNVDMI MAKDTAEINV NGKLSYVRGI EIKDWVQDTH AGFLDSLIGL NCRYILTQSF SIVPKTEALT LIDRQLKQLR STEDDGISQQ DALLLAKDEL VSGNVCFGDH HFTLMLYADS LKEVQKISTE AFDKLSDLGF IVSLSNIALD EAYLSQLPCN FKFRPRVSMI SSKNFVGLNS LHNNPVGKAT NNCWGNAITL LKTNTNTPFY FNFHQTRLGR NDFGDMHLGH TAILGKSGTG KTVLATFLLS QCTAFSNPDT FPKNSLNKKF TAIYLDKDYG AEIAVRAMGG KYNRLKNGQP TGFNPFMLEK NEPNITFLNN FIALLATSDG STLSTKDKED INFAVRAVMD LDKEYRAEGI SRLLENIQKD VENENSLERR LRIWKKGGIY GWVFDNETDS LSFNEYDIYG FDGTEVLDNP AVINPLAFYL LFRVQQILDG RRVVVFLDEF WKWLQSDSFS EFAYDGLKTM RKKNGFIVPI TQSPDEIIKS KIARAIIEQV ETFIFLPNSK ADYHEYTHEF KVSEKEYSII KNLEDDSRMF LVKKGSENDS RGNTVVAKLD LSALDRGSMK VLSGSADNVA ILDKIVSEVG ENPQDWLPIF KAEMMNN // ID D1AUA8_ANACI Unreviewed; 98 AA. AC D1AUA8; DT 19-JAN-2010, integrated into UniProtKB/TrEMBL. DT 19-JAN-2010, sequence version 1. DT 16-APR-2014, entry version 18. DE SubName: Full=Type IV secretion system protein VirB3; GN Name=virB3; OrderedLocusNames=ACIS_00521; OS Anaplasma centrale (strain Israel) (Anaplasma marginale subsp. OS centrale (strain Israel)). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Anaplasma. OX NCBI_TaxID=574556; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Israel; RX PubMed=19854912; DOI=10.1128/JB.01330-09; RA Herndon D.R., Palmer G.H., Shkap V., Knowles D.P.Jr., Brayton K.A.; RT "Complete genome sequence of Anaplasma marginale subsp. centrale."; RL J. Bacteriol. 192:379-380(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001759; ACZ49136.1; -; Genomic_DNA. DR RefSeq; YP_003328450.1; NC_013532.1. DR EnsemblBacteria; ACZ49136; ACZ49136; ACIS_00521. DR GeneID; 8651475; -. DR KEGG; acn:ACIS_00521; -. DR PATRIC; 31927337; VBIAnaCen103588_0503. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; ACEN574556:GHF2-433-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 98 AA; 11141 MW; 1C30BCF8F3562BDE CRC64; MSSGSVKTDQ LFKGLTRPTM LFGVSYTFAI LNFMISIMIF MYSNDFRVLL LLAPGMHAIG FAASSKDPLF MDLFVIKMQK CSKCLNRFYH NANSYDVM // ID D1AV73_STRM9 Unreviewed; 80 AA. AC D1AV73; DT 19-JAN-2010, integrated into UniProtKB/TrEMBL. DT 19-JAN-2010, sequence version 1. DT 13-NOV-2013, entry version 19. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=Smon_1178; OS Streptobacillus moniliformis (strain ATCC 14647 / DSM 12112 / NCTC OS 10651 / 9901). OC Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; OC Streptobacillus. OX NCBI_TaxID=519441; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 14647 / DSM 12112 / NCTC 10651 / 9901; RX DOI=10.4056/sigs.48727; RA Nolan M., Gronow S., Lapidus A., Ivanova N., Copeland A., Lucas S., RA Glavina Del Rio T., Chen F., Tice H., Pitluck S., Cheng J.F., Sims D., RA Meincke L., Bruce D., Goodwin L., Brettin T., Han C., Detter J.C., RA Pati A., Mavromatis K., Mikhailova N., Chen A., Palaniappan K., RA Land M., Hauser L., Chang Y.J., Jeffries C.D., Rohde M., Sproer C., RA Goker M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., RA Kyrpides N.C., Klenk H.P.; RT "Complete genome sequence of Streptobacillus moniliformis type strain RT (9901T)."; RL Stand. Genomic Sci. 1:300-307(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001779; ACZ01633.1; -; Genomic_DNA. DR RefSeq; YP_003306510.1; NC_013515.1. DR EnsemblBacteria; ACZ01633; ACZ01633; Smon_1178. DR GeneID; 8600910; -. DR KEGG; smf:Smon_1178; -. DR PATRIC; 32452145; VBIStrMon53754_1180. DR HOGENOM; HOG000109913; -. DR KO; K03198; -. DR OrthoDB; EOG6DJZC4; -. DR BioCyc; SMON519441:GHY8-1216-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 80 AA; 9274 MW; A5099FFB2794B906 CRC64; MKKLPVYKGI MENKTSFGIP LSAFMYLGVF ALLLYIFLKT FLIIIPVAIL FIVLKIVSRK DSKFLNVFFI NLFHGNFYGF // ID D1AYH6_STRM9 Unreviewed; 80 AA. AC D1AYH6; DT 19-JAN-2010, integrated into UniProtKB/TrEMBL. DT 19-JAN-2010, sequence version 1. DT 13-NOV-2013, entry version 18. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=Smon_0885; OS Streptobacillus moniliformis (strain ATCC 14647 / DSM 12112 / NCTC OS 10651 / 9901). OC Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; OC Streptobacillus. OX NCBI_TaxID=519441; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 14647 / DSM 12112 / NCTC 10651 / 9901; RX DOI=10.4056/sigs.48727; RA Nolan M., Gronow S., Lapidus A., Ivanova N., Copeland A., Lucas S., RA Glavina Del Rio T., Chen F., Tice H., Pitluck S., Cheng J.F., Sims D., RA Meincke L., Bruce D., Goodwin L., Brettin T., Han C., Detter J.C., RA Pati A., Mavromatis K., Mikhailova N., Chen A., Palaniappan K., RA Land M., Hauser L., Chang Y.J., Jeffries C.D., Rohde M., Sproer C., RA Goker M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., RA Kyrpides N.C., Klenk H.P.; RT "Complete genome sequence of Streptobacillus moniliformis type strain RT (9901T)."; RL Stand. Genomic Sci. 1:300-307(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001779; ACZ01352.1; -; Genomic_DNA. DR RefSeq; YP_003306229.1; NC_013515.1. DR EnsemblBacteria; ACZ01352; ACZ01352; Smon_0885. DR GeneID; 8600609; -. DR KEGG; smf:Smon_0885; -. DR PATRIC; 32451549; VBIStrMon53754_0888. DR HOGENOM; HOG000109913; -. DR OrthoDB; EOG6DJZC4; -. DR BioCyc; SMON519441:GHY8-915-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 80 AA; 9335 MW; A26BE807571B11E2 CRC64; MTKIPVYKGL MENKTAFGVP ISVYTYLLGF GFILYILLKT FLIIIPLIIL FISLKMVSRK DAKFLSIFFI NIFYSKFYGF // ID D1D242_9RHIZ Unreviewed; 116 AA. AC D1D242; DT 19-JAN-2010, integrated into UniProtKB/TrEMBL. DT 19-JAN-2010, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BAKG_02599; OS Brucella sp. 83/13. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=520449; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=83/13; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Whatmore A.M., RA Perrett L.L., O'Callaghan D., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Brucella sp. 83/13."; RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DS999661; EEZ34585.1; -; Genomic_DNA. DR EnsemblBacteria; EEZ34585; EEZ34585; BAKG_02599. DR PATRIC; 24275964; VBIBruSp75385_3080. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13068 MW; 1FA20F7423934E0B CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TKTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPVAFT KRKRES // ID D1EBW8_NEIGO Unreviewed; 94 AA. AC D1EBW8; DT 19-JAN-2010, integrated into UniProtKB/TrEMBL. DT 19-JAN-2010, sequence version 1. DT 13-NOV-2013, entry version 4. DE SubName: Full=Conjugal transfer protein; GN ORFNames=NGKG_04023; OS Neisseria gonorrhoeae SK-92-679. OG Plasmid unnamed. OC Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; OC Neisseriaceae; Neisseria. OX NCBI_TaxID=528359; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=SK-92-679; PLASMID=unnamed; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Whittington W., RA Seifert H., Lander E., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Neisseria gonorrhoeae strain SK-92-679."; RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EQ973077; EEZ58038.1; -; Genomic_DNA. DR EnsemblBacteria; EEZ58038; EEZ58038; NGKG_04023. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 94 AA; 11013 MW; ED410390C1646323 CRC64; MANRPNLFWG GDREMVQVSL LITFVLVVAA QNTYAFVIGL VFWFFALYAL RKLAKYDPLL RFVGLRSITK YKRFYPPHST PFRNNTSTQG NRYK // ID D1EJK9_9RHIZ Unreviewed; 116 AA. AC D1EJK9; DT 19-JAN-2010, integrated into UniProtKB/TrEMBL. DT 19-JAN-2010, sequence version 1. DT 13-NOV-2013, entry version 5. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BALG_02867; OS Brucella pinnipedialis M292/94/1. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=520462; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=M292/94/1; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Whatmore A.M., RA Perrett L.L., O'Callaghan D., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Brucella pinnipedialis M292/94/1."; RL Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EQ999534; EEZ29514.1; -; Genomic_DNA. DR ProteinModelPortal; D1EJK9; -. DR EnsemblBacteria; EEZ29514; EEZ29514; BALG_02867. DR PATRIC; 24265000; VBIBruPin74143_0783. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID D1ESZ9_BRUML Unreviewed; 116 AA. AC D1ESZ9; DT 19-JAN-2010, integrated into UniProtKB/TrEMBL. DT 19-JAN-2010, sequence version 1. DT 13-NOV-2013, entry version 7. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BAMG_01425; OS Brucella melitensis bv. 1 str. Rev.1. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=520464; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Rev.1; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Whatmore A.M., RA Perrett L.L., O'Callaghan D., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Brucella melitensis bv. 1 str. Rev.1."; RL Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EQ999555; EEZ12788.1; -; Genomic_DNA. DR ProteinModelPortal; D1ESZ9; -. DR EnsemblBacteria; EEZ12788; EEZ12788; BAMG_01425. DR PATRIC; 24227931; VBIBruMel106018_0175. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID D1F1Y2_BRUML Unreviewed; 116 AA. AC D1F1Y2; DT 19-JAN-2010, integrated into UniProtKB/TrEMBL. DT 19-JAN-2010, sequence version 1. DT 13-NOV-2013, entry version 7. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BAOG_02265; OS Brucella melitensis bv. 3 str. Ether. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=520466; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Ether; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Whatmore A.M., RA Perrett L.L., O'Callaghan D., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Brucella melitensis bv. 3 str. Ether."; RL Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EQ999588; EEZ10372.1; -; Genomic_DNA. DR ProteinModelPortal; D1F1Y2; -. DR EnsemblBacteria; EEZ10372; EEZ10372; BAOG_02265. DR PATRIC; 24236770; VBIBruMel115656_0645. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID D1FDT8_9RHIZ Unreviewed; 116 AA. AC D1FDT8; DT 19-JAN-2010, integrated into UniProtKB/TrEMBL. DT 19-JAN-2010, sequence version 1. DT 13-NOV-2013, entry version 5. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BAPG_02511; OS Brucella ceti M490/95/1. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=520458; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=M490/95/1; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Whatmore A.M., RA Perrett L.L., O'Callaghan D., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Brucella ceti M490/95/1."; RL Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EQ999599; EEZ07176.1; -; Genomic_DNA. DR ProteinModelPortal; D1FDT8; -. DR EnsemblBacteria; EEZ07176; EEZ07176; BAPG_02511. DR PATRIC; 24215810; VBIBruCet48569_0916. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID D1LZG2_RHILV Unreviewed; 108 AA. AC D1LZG2; DT 19-JAN-2010, integrated into UniProtKB/TrEMBL. DT 19-JAN-2010, sequence version 1. DT 13-NOV-2013, entry version 6. DE SubName: Full=TrbD; GN Name=trbD; OS Rhizobium leguminosarum bv. viciae. OG Plasmid pRleVF39b. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium. OX NCBI_TaxID=387; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=VF39; PLASMID=pRleVF39b; RX PubMed=23144250; DOI=10.1128/JB.01234-12; RA Ding H., Yip C.B., Hynes M.F.; RT "Genetic Characterization of a Novel Rhizobial Plasmid Conjugation RT System in Rhizobium leguminosarum bv. viciae Strain VF39SM."; RL J. Bacteriol. 195:328-339(2013). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HQ711365; ACY71076.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 108 AA; 11934 MW; 2C7D10524F6EE67A CRC64; MAGSVNTADG GDEYIECHPV ILALTRPPTV MGIPYTYFLA ECFLSLMVFM ILGSILWFPV SFVILHSILY VLTVKLDLWF FEIVGRLSMC GVNPLGRRLG GGIRTYGA // ID D1P800_9ENTR Unreviewed; 923 AA. AC D1P800; DT 09-FEB-2010, integrated into UniProtKB/TrEMBL. DT 09-FEB-2010, sequence version 1. DT 16-APR-2014, entry version 9. DE SubName: Full=Type IV secretion/conjugal transfer ATPase, VirB4 family; GN ORFNames=PROVRUST_08381; OS Providencia rustigianii DSM 4541. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Providencia. OX NCBI_TaxID=500637; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DSM 4541; RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., RA Courtney L., Fronick C., Harrison M., Strong C., Farmer C., RA Delahaunty K., Markovic C., Hall O., Minx P., Tomlinson C., RA Mitreva M., Nelson J., Hou S., Wollam A., Pepin K.H., Johnson M., RA Bhonagiri V., Nash W.E., Warren W., Chinwalla A., Mardis E.R., RA Wilson R.K.; RL Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ABXV02000074; EFB70443.1; -; Genomic_DNA. DR EnsemblBacteria; EFB70443; EFB70443; PROVRUST_08381. DR PATRIC; 36131343; VBIProRus116159_7194. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 923 AA; 105398 MW; 17525431B51F2096 CRC64; MSTVFKGLTR PALIRGLGVP LYPFLIMCVF CVLLGVWIHD AFYFLIIVGV FVIKKIMKID ERYFELVYLR YLVMGNPISN QKYQAVHVGG NDYDRVDLSD VENFMKLSDQ ASLEKLIPYS SHVTDDLVLS QNRDLIATFE LSGGYFECVS ENDLAMMVDQ LNTLIRSFEG KPVTFYTHRI RNKKIVSTEF NSPVPFANRV MKAYYQSLTQ SDFYQNRLFL TVCFKPFSLE EKVAEFLSSK KKNKQKGKSV LDEPINEMNE ICARFNTYLS RYKARRLGVY TESDRVFSSQ LSFYQYLLSG QWQPVRVTSS PFYTYLGGKD IFFGGDAGQI SISNPMRYFR IIEIKDFFQE TEAGIFDSLM YMPVEYTLTT SFTPLGKRDA IKKLDDQREK LEMTDDAAKS QITDLEVAVD MVSSGYLSMG HSHLTLCVFA DNPDELVKNT NMVTDALQNL GLIISYSTLS LGAAFFSQLP GNYTLRPRLS ILSSLNYAEM ECFHNFFTGK EKGNTWGNSL ITLKGSGNDI YHLNYHMTTE YQDYFGKNPT LGHSEILGTS NAGKTVLMMM QACALQQFGA ENSFPPNSKI KKQTTVFFDK DRAGEVAIRA MGGDYYKVKL GEPTGWNPFA MPATKRNLIF LKDLVRILCT LNSEKGLTDY QNKLISDAVE RLMQREDRSF GISKLIPLIM EERTAETQRD GLKIRLQAWQ QGGEFGWVFD NATDDFDISD KTIFGIDGTE FLDDAILSQV VPFYLIHKIT LLADGRRLTL YFDEFWQWLK NLLTATMVYN KLKTGRKLNM VIIFATQSPD ELLKSPLISA LREQLATHIY LSNKNSTKKE YVDGLQVKEL YYDKIRNIDP LSRQFLIVKN PQRKGDSQDF AAFASLDLGG AAYYLPILSA SAEQLEIFDE IYQDGMTPDE WIDIYLDRAN RAA // ID D1RHP8_LEGLO Unreviewed; 100 AA. AC D1RHP8; DT 09-FEB-2010, integrated into UniProtKB/TrEMBL. DT 09-FEB-2010, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Legionella vir-like protein LvhB3; GN Name=lvhB3; ORFNames=LLB_1136; OS Legionella longbeachae D-4968. OC Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; OC Legionellaceae; Legionella. OX NCBI_TaxID=638315; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=D-4968; RA Kozak N.A., Buss M., Frace M., Govil D., Lucas C.E., Travis T., RA Olsen-Rasmussen M., Benson R.F., Fields B.S.; RT "The Genomic Sequence of the Soil-Dwelling Opportunistic Pathogen RT Legionella longbeachae."; RL J. Bacteriol. 0:0-0(2010). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACZG01000001; EEZ95954.1; -; Genomic_DNA. DR EnsemblBacteria; EEZ95954; EEZ95954; LLB_1136. DR PATRIC; 35981173; VBILegLon24077_1106. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 100 AA; 11558 MW; 08B4E172950A4AEC CRC64; MSNQNPATLY HHPVYGALTR CAMTGGVTFE YHSINLMIAV CVFIAMGNLL YGLVFLPLHA YGWLVCRNDT SYFTIIYKRW NLCPPMPNQK FWGVRTYEPF // ID D2BWU3_DICD5 Unreviewed; 915 AA. AC D2BWU3; DT 09-FEB-2010, integrated into UniProtKB/TrEMBL. DT 09-FEB-2010, sequence version 1. DT 16-APR-2014, entry version 19. DE SubName: Full=CagE, TrbE, VirB component of type IV transporter system, conserved region; GN OrderedLocusNames=Dd586_1459; OS Dickeya dadantii (strain Ech586). OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Dickeya. OX NCBI_TaxID=590409; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Ech586; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., RA Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., RA Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., RA Mikhailova N., Balakrishnan V., Glasner J., Perna N.T.; RT "Complete sequence of Dickeya dadantii Ech586."; RL Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001836; ACZ76327.1; -; Genomic_DNA. DR RefSeq; YP_003333032.1; NC_013592.1. DR EnsemblBacteria; ACZ76327; ACZ76327; Dd586_1459. DR GeneID; 8660390; -. DR KEGG; ddc:Dd586_1459; -. DR PATRIC; 32069615; VBIDicDad110536_1465. DR HOGENOM; HOG000119263; -. DR KO; K03199; -. DR OrthoDB; EOG6HMX9P; -. DR BioCyc; DDAD590409:GHDW-1497-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 915 AA; 103276 MW; 327E3641FA3E9C66 CRC64; MTTLNKALTR PAAIMGIPLV PFVLVSGAIV LLSVYTRYYL ALLLIPAWLE MRAKARADIH YFGLLWLAFK TRGRFATNRH FGATAMLASR YDAVDISEFT DKMKLNARIT LDKYIPYSSH LHPHVIRNRH GDFVASWELG GTVFESEDEH HLTLMTSHLN NLIRAYEGLP VTFYIHRIRE TYQDAFEATS GIPFSDEVAT RYYRALNAKP LWRHRLFFTV CYAPFSALEK KAMKTQPAGK RQAALDQALK IMLEHHAALG SALSRYMATP LGTYEEKGRV YSSQLAFYHR LITGQWQPVA VTRSPFYLTL STPDVFFTTD TAECQTVGGS RFFRSLEIKD YSPETAAGLL DALLYAESEY VLTQSFTCMA RDEAQHHIRL AEKRLNATDD DALSQREELV VLRDLLQSGH VSCGKYHFSL LVSSASAEQV VRETHALAQP FTDLGIMTSL STLSLPAAYL AQLPGMYTFR PRLVVVSSQN YADLGSLHNF HPHKRSGNPW GDAIAILTSP GGGGYYLNLH DSQVGRDDFN EKTPGNTAII GKTGSGKTLL MTMMQHLMQK YRHPATFSAA TPGKRLTTVY FDKDRAAEMS IRQMGGRYFR IRTGTPAGFN PFSLAPTRRN ISFIKQLVRM LCRRNGKPLD PRDEARISAA VDTLMQDYPP ELRRYGITRL LEVLPEPPTR EARTNGLRIR LKQWAQGGEF GWIFDNAEDS FNIGESDNIG IDGTEFLDDD DIRGPITFYL LFRVTSLLDG RRLVMFMDEF WKWLADVEFS KFSLNMLKVI RKLNGIFIPA TQSPDEIVRH PIAPAIIEQC STQIFLANPK ASRADYVEKV NVPDSVYDTV RRLDPGEHYM VIVKTPLRAG ETRPFVALAR MDLSGLGNLT TLLSGSEDNL KRFDALYQEG MSPHDWKAAF LEQAI // ID D2C3C7_DICD5 Unreviewed; 914 AA. AC D2C3C7; DT 09-FEB-2010, integrated into UniProtKB/TrEMBL. DT 09-FEB-2010, sequence version 1. DT 16-APR-2014, entry version 19. DE SubName: Full=CagE, TrbE, VirB component of type IV transporter system, conserved region; GN OrderedLocusNames=Dd586_2666; OS Dickeya dadantii (strain Ech586). OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Dickeya. OX NCBI_TaxID=590409; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Ech586; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., RA Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., RA Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., RA Mikhailova N., Balakrishnan V., Glasner J., Perna N.T.; RT "Complete sequence of Dickeya dadantii Ech586."; RL Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001836; ACZ77508.1; -; Genomic_DNA. DR RefSeq; YP_003334213.1; NC_013592.1. DR EnsemblBacteria; ACZ77508; ACZ77508; Dd586_2666. DR GeneID; 8661611; -. DR KEGG; ddc:Dd586_2666; -. DR PATRIC; 32072068; VBIDicDad110536_2678. DR HOGENOM; HOG000119263; -. DR KO; K03199; -. DR OrthoDB; EOG6HMX9P; -. DR BioCyc; DDAD590409:GHDW-2718-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 914 AA; 103481 MW; BD3DCAEB4E43DC82 CRC64; MAKLLKAMKR PAALWGVPMV PLLGVTGITI IAAVWTSVAF LALLPVEFLV MKSVTRNEPM RFSLIAVWLR ARGKPAANRL FGATVFMPVK HDAVDITEFL NAMKLNQCAT LRKYIPYSSH IHQHVVRSPH SDLYCTWELT GTPFDCESEE TLNIDRNQLH GLIRSFEGMP VTFYIHNVRE PFTDSLHKTS DNPYADEISR LYYASLAADP FRRNRLFLTV CYRPFVSLEK AGRRRMNDGK KLKELDAALR EMLEIKESLD TALSRYAARP LGTFTEDHAV FSSQLSFYEY LLTHQWRRVR VTRAPAYSMM GSAALFFSGE SGQINHASGT QYFRGLEVKE FPEETATGMM DSLLYAPCDY IITQSYTCMS REEARKAIKR TRRLLMSSDD DAVSQRLDLD VALDLLTSGK IAYGKHHFSI MVFSRSLDSL VADTSEISNA LNNLGITPVP AALSLSAAYM AQLPGNYHLR PRKGELSSQN FVELAALHNF YPGKRDNAPW GDAMALLRTP SGDGYYLNLH NTLADKDEFN EKNPASTCIL GTNGSGKTML MTFLENMQQK YGRTDSFSPD AKTKRLTTVY LDKDRGAEMN IRALGGRYYR ITHGDPTGWN PFSLLPTKRN ISFISQLMKL LCTRNGATIT PRDERRLNDA VMAVMSNEPQ YRIYGITRLL ENLPEPATRE AQENGLSIRL SQWAQGGEFG WVFDNASDTF DISRCDNFGI DGTEFLDDAN VCAPISFYLL YRITTLLDGR RLVIFMDEFW KWLRDPIFKD FAYNRLKTIR KLNGMLVVGT QSPAEIIRDE IAPAVIEQCG TQILAANPSA DRAHYVDGMK FEPEVFDVVK NLDPQARQYV VVKNQFRRGD TKRFAARVTL DLSGVGRYTR VMSGSADNLE IFDSLYREGM QPHEWLEPYL AQAL // ID D2ET43_9BACE Unreviewed; 98 AA. AC D2ET43; DT 09-FEB-2010, integrated into UniProtKB/TrEMBL. DT 09-FEB-2010, sequence version 1. DT 18-SEP-2013, entry version 5. DE SubName: Full=Uncharacterized protein; GN ORFNames=HMPREF0969_00315; OS Bacteroides sp. D20. OC Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; OC Bacteroides. OX NCBI_TaxID=585543; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=D20; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Feldgarden M., Earl A., Young S.K., Zeng Q., Koehrsen M., RA Alvarado L., Berlin A., Bochicchio J., Borenstein D., Chapman S., RA Chen Z., Engels R., Freedman E., Gellesch M., Goldberg J., Griggs A., RA Gujja S., Heilman E., Heiman D., Hepburn T., Howarth C., Jen D., RA Larson L., Lewis B., Mehta T., Park D., Pearson M., Roberts A., RA Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., Thomson T., RA Walk T., White J., Yandava C., Allen-Vercoe E., Strauss J., Sibley C., RA White A., Ambrose C., Haas B., Nusbaum C., Birren B.; RT "The Genome Sequence of Bacteroides sp. strain D20."; RL Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG730105; EFA21120.1; -; Genomic_DNA. DR EnsemblBacteria; EFA21120; EFA21120; HMPREF0969_00315. DR PATRIC; 35661209; VBIBacSp64485_0836. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 11064 MW; C6FDE626A7E0FBF5 CRC64; MKSREEQYPD YPLFKGLQRP LEFMGIQGRY IYWAAATIGI AIVGFIISYC LAGFVLALIV LAVAITVGAG LILFKQRKGL HSKRQERGVF IYAYSKKM // ID D2MXK1_CAMJU Unreviewed; 902 AA. AC D2MXK1; DT 02-MAR-2010, integrated into UniProtKB/TrEMBL. DT 02-MAR-2010, sequence version 1. DT 16-APR-2014, entry version 12. DE SubName: Full=Uncharacterized protein; GN ORFNames=C414_000160011; OS Campylobacter jejuni subsp. jejuni 414. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=683083; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=414; RX PubMed=21418497; DOI=10.1111/j.1462-2920.2011.02461.x; RA Hepworth P.J., Ashelford K.E., Hinds J., Gould K.A., Witney A.A., RA Williams N.J., Leatherbarrow H., French N.P., Birtles R.J., RA Mendonca C., Dorrell N., Wren B.W., Wigley P., Hall N., Winstanley C.; RT "Genomic variations define divergence of water/wildlife-associated RT Campylobacter jejuni niche specialists from common clonal complexes."; RL Environ. Microbiol. 13:1549-1560(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADGM01000010; EFC32941.1; -; Genomic_DNA. DR EnsemblBacteria; EFC32941; EFC32941; C414_000160011. DR PATRIC; 36494036; VBICamJej144577_1353. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 902 AA; 103816 MW; B299085716C86CA0 CRC64; MTPFVIAMGS IILVAFYSQN IFLVGFSIPV FFIMKAMTKK DDFIFRLMFL KMRFFSNPAS KNYYKAKTYS TNSYRQMPPN SNFPKISVFG LNAEPNFEKL IPFSSLINDS VVITKDYLLM TTWEIGGISF EAEDDDELDI KNDLLNMLFK SFANEPISFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLKKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSK QLEFYNYLLG GKFNPIRVLP SPIDQYLNGN LQNIQFGHDT IQFNQNDSTK RFARCIEIKD YTNETFAGIL DILMYLDVEY TITQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVEQID EALDQLTNGE ISFGKYHFSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN FSSLIALHNF SMGKRDKNCW GDAVSILKTP NKQPYYFNFH QSSGVNKNDF GELFLANTLI LGQSGGGKTV FMNFIVDQMM KYASKDTFPD DIPEENKKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVEST QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDN LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSVEDFLK LKNATTLIEQ SATMVFLPNP KAKEEEYVKG VGLSYDEYMI IKGFNPAKRQ FLIKRQDEKV ICTLDLSSLG NENLKILSTG TAHIDTIEKI FSQENKSLDE KVLELKEFYK NS // ID D2TVB3_CITRI Unreviewed; 915 AA. AC D2TVB3; DT 02-MAR-2010, integrated into UniProtKB/TrEMBL. DT 02-MAR-2010, sequence version 1. DT 16-APR-2014, entry version 21. DE SubName: Full=Putative conjugal transfer protein TriC; GN Name=triC; OrderedLocusNames=ROD_p2481; OS Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype OS 4280). OG Plasmid pCROD2. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Citrobacter. OX NCBI_TaxID=637910; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ICC168; PLASMID=pCROD2; RX PubMed=19897651; DOI=10.1128/JB.01144-09; RA Petty N.K., Bulgin R., Crepin V.F., Cerdeno-Tarraga A.M., RA Schroeder G.N., Quail M.A., Lennard N., Corton C., Barron A., RA Clark L., Toribio A.L., Parkhill J., Dougan G., Frankel G., RA Thomson N.R.; RT "The Citrobacter rodentium genome sequence reveals convergent RT evolution with human pathogenic Escherichia coli."; RL J. Bacteriol. 192:525-538(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FN543504; CBG91869.1; -; Genomic_DNA. DR RefSeq; YP_003368547.1; NC_013718.1. DR EnsemblBacteria; CBG91869; CBG91869; ROD_p2481. DR GeneID; 8695081; -. DR KEGG; cro:ROD_p2481; -. DR PATRIC; 32033874; VBICitRod33214_4877. DR HOGENOM; HOG000119263; -. DR KO; K03199; -. DR OMA; FIAMRAM; -. DR BioCyc; CROD637910:GJIG-5240-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 915 AA; 103922 MW; 4184E5D3DBE3A606 CRC64; MSTLYKAMTR PAMYVGVPVV PLTVVAGALF LAGVYISKLI WLAIPVAVFI LRMITKQDDH IFNLYFLKLK MLGNSVCNRF FGARAFLSGQ YEAVEIDEFI NAMKLNERIT TGKYIPYSSH VDKNIVKTKN GDYVATWQLM GINFESISAE MLETIDSQVA TLVRSFSGLP VSFYNHSCRA SFYDAFTTKS GNKYADIISD CYYGSMKKNK FKGNTLYFTL IYRPDGRVEK LEKRKKSIKE KKDDINIHVK RMNEMINTFS GALDKFTCKL LGMYEENGKV FSSQLSFYNY LLTGKLQKIR VTDSPVYNVL GGVDVFFNHD TGQICRIDGN KFFRSIEIKD FCSETASGVF DVLQYSDADY IITHSYTSMS KSEALSTIKR AEKQLKSTED DAVTQLQELE KAKNDIVSGD ISFGYYHFTL MVMADSIREL DESVSKITAD FTDLGIIPAL STMSLPAAYF AQLPAVFHLR PRLSPVSNVN FVELASFHNF YQGKRDKNCW TEAVAILKTP SKQAYYLNLH NSVLFKDERG EKNLANTKVI GTAGSGKTMF LSYLACSLQK YNNPETFADS AKNKKLTCVF LDKDRGAELC IRMLGGEYYT VKSGEPTGWN PFALEATKRN RIFVKQLMEI LCTRNGERLS TRERLLISES VDAVMDFPPG EMREYGITRM LEHLMQRDDR DEQENGIILR LSQWANGQAH GWVFDNAKDT FNIQHVNNFG IDGTEFLDDP MVCAPITFYL LYRITQLLDG RRLVIFLDEF WKWLQDEAFS DFVYNKLKTI RKLNGLVIPA TQSPDEILKN KISRAVVEVC STSIYLANPD ADYNDYVEGL KLTPEEFNIV KNLDPMSRQF LIKKSSLKKG DGKSFSALAT LDLSGLGGYL KILSASADNL EIFESIYHEG MEPDDWVPEY LERAI // ID D2UE00_XANAP Unreviewed; 103 AA. AC D2UE00; DT 02-MAR-2010, integrated into UniProtKB/TrEMBL. DT 02-MAR-2010, sequence version 1. DT 11-DEC-2013, entry version 19. DE SubName: Full=Probable type iv secretion system protein virb3; GN Name=virB3; OrderedLocusNames=XALC_1836; OS Xanthomonas albilineans (strain GPE PC73 / CFBP 7063). OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=380358; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=GPE PC73 / CFBP 7063; RA Pieretti I., Royer M., Barbe V., Carrere S., Koebnik R., RA Cociancich S., Couloux A., Darrasse A., Gouzy J., Jacques M.A., RA Lauber E., Manceau C., Mangenot S., Poussier S., Segurens B., RA Szurek B., Verdier V., Arlat M., Rott P.; RT "The complete genome sequence of Xanthomonas albilineans provides new RT insights into the reductive genome evolution of the xylem-limited RT Xanthomonadaceae."; RL BMC Genomics 10:616-616(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FP565176; CBA16326.1; -; Genomic_DNA. DR RefSeq; YP_003376317.1; NC_013722.1. DR GeneID; 8703386; -. DR KEGG; xal:XALc_1836; -. DR PATRIC; 32546125; VBIXanAlb89132_1794. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR BioCyc; XALB29447:GJN1-1831-MONOMER; -. DR BioCyc; XALB380358:GLMQ-1831-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 103 AA; 12333 MW; 5323C994372ECAD4 CRC64; MHKNVLFRGC TRPAMFFGVP YIPFFIGAGG GFLMGVYFDM RFLLLIPVIV FVMQQMTKRD EMIFRMLGLR WMFRMRVRNQ QRYSGMWVFS PNEYRKDAPG TKR // ID D2ZSY4_NEIMU Unreviewed; 133 AA. AC D2ZSY4; DT 23-MAR-2010, integrated into UniProtKB/TrEMBL. DT 23-MAR-2010, sequence version 1. DT 18-SEP-2013, entry version 4. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=NEIMUCOT_03717; OS Neisseria mucosa ATCC 25996. OC Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; OC Neisseriaceae; Neisseria. OX NCBI_TaxID=546266; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 25996; RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., RA Courtney L., Fronick C., Harrison M., Strong C., Farmer C., RA Delahaunty K., Markovic C., Hall O., Minx P., Tomlinson C., RA Mitreva M., Nelson J., Hou S., Wollam A., Pepin K.H., Johnson M., RA Bhonagiri V., Nash W.E., Warren W., Chinwalla A., Mardis E.R., RA Wilson R.K.; RL Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACDX02000001; EFC89917.1; -; Genomic_DNA. DR EnsemblBacteria; EFC89917; EFC89917; NEIMUCOT_03717. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 133 AA; 15217 MW; B47C76031BA3E933 CRC64; MGNNDFIDVD TDLPSYKALE REATFLGMPM VPVVMSIGLP LLITMMLLPF FQAKAFLLLL FPLPVLAFIY TQTQQDDKAL RIIGLSTLSV LRRRNYRLFG KTNTVLGSKY GRQRDDYKRF FEQDSKAATR SGR // ID D3GML5_9ENTR Unreviewed; 912 AA. AC D3GML5; DT 23-MAR-2010, integrated into UniProtKB/TrEMBL. DT 23-MAR-2010, sequence version 1. DT 16-APR-2014, entry version 7. DE SubName: Full=Putative Pilx3-4/VirB3-4-like protein; GN Name=virB3-4-like2; OS Enterobacter hormaechei. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex. OX NCBI_TaxID=158836; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=05-545; RA Paauw A., Leverstein-van Hall M.A., Verhoef J., Fluit A.C.; RT "Evolution in Quantum Leaps: Multiple Combinatorial Transfers of HPI RT and Other Genetic Modules in Enterobacteriaceae."; RL PLoS ONE 5:e8662-e8662(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FN297818; CAX65502.1; -; Genomic_DNA. DR ProteinModelPortal; D3GML5; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 912 AA; 103084 MW; 095C183866793052 CRC64; MAKLLKAMKR PAALWGVPMV PLLAVTGVTI IVAIWTSVAL LFLLPVQFLV MKSLTRNEPM RFNLIAVWLR AKGKPVANRL FGATTFMPVE HDDVDIKEFL DAMKLNQCAT IKKYIPYSSH IHQHVVRSPK SDLYCTWELM GTPFDCESDE SLQFGTNQLH GLIRSFEGMP VTFYIHNDRN TFTDNLHKDS GNPYADEVSR LYYASVGLFR RNRLFLTVCY RPFVSLEKAE RKRMKDSQKL KELDGALLEM LEIKSTLDTA LSRYGARPLG TFTEGNAVFS SQLAFYEYLL THQWRKVRVT RTPAYDVMGA AALFFSAESG QINHANGTQY FRGLEVKEFS EETATGMMDS LLYAPCDYVI TQSYTCMSRE EAKKAIKRTR RLLMSADDDA VSQRLDLDVA LDLLTSGKIA YGKHHFSIMV YSPSLESLVA DTNEISNALN NIGITPVPAE ISLSAAYMAQ LPGNYNLRPR KGELSSQNFV ELAALHNFYP GKRDKAPWGD AMALLRTPSG DGYYINLHNT LADKDEFNEK NPASTCILGT NGSGKTMLMT FFEIMQQKYG REDSFSPDAK TKRLTTVYLD KDRGAEMNIR ALGGRYYRVI SGESTGWNPF SLPATKRNIN FIKQLMKILC TRNGSTISPR DERRLSDAVN AVMNDEPQYR VYGITRMLEN LPEPATKEAQ ENGLSIRLSQ WAQGGEFGWV FDNESDTFDI SNCDNFGIDG TEFLDDASVC APISFYLLYR ITSLLDGRRL VIFMDEFWKW LRDPVFKDFA YNKLKTIRKL NGMLVVGTQS PAEIIKDDIA PAVIEQCGTQ ILAANPNADR AHYVDGMKFE PEVFDVVKGL DPQARQYVVV KNQFKRGDTK RFAARVTLDL SGIGRYTKVM SGDAPNLEIF ESIYREGMQP HEWLDTYLAK AL // ID D3HLJ7_LEGLN Unreviewed; 99 AA. AC D3HLJ7; DT 23-MAR-2010, integrated into UniProtKB/TrEMBL. DT 23-MAR-2010, sequence version 1. DT 14-MAY-2014, entry version 20. DE SubName: Full=Conjugal transfer protein trbD; GN Name=trbD; OrderedLocusNames=LLO_2878; OS Legionella longbeachae serogroup 1 (strain NSW150). OC Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; OC Legionellaceae; Legionella. OX NCBI_TaxID=661367; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NSW150; RX PubMed=20174605; DOI=10.1371/journal.pgen.1000851; RA Cazalet C., Gomez-Valero L., Rusniok C., Lomma M., Dervins-Ravault D., RA Newton H.J., Sansom F.M., Jarraud S., Zidane N., Ma L., Bouchier C., RA Etienne J., Hartland E.L., Buchrieser C.; RT "Analysis of the Legionella longbeachae genome and transcriptome RT uncovers unique strategies to cause Legionnaires' disease."; RL PLoS Genet. 6:E1000851-E1000851(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FN650140; CBJ13317.1; -; Genomic_DNA. DR RefSeq; YP_003456346.1; NC_013861.1. DR EnsemblBacteria; CBJ13317; CBJ13317; LLO_2878. DR GeneID; 8801457; -. DR KEGG; llo:LLO_2878; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; AKSDPYM; -. DR BioCyc; LLON661367:GJAR-3097-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 99 AA; 11440 MW; 09D89424BEC76EE3 CRC64; MSLRSIPIRR CGNRPSLFMG GDRELVMFSG LLSAVLIFAA QDWLAAFAGL VIWFLSLKGL RLMAKSDPYM RAIYLRQRHY QVYYSARSTP FKVNKRGYQ // ID D3SGR4_THISK Unreviewed; 112 AA. AC D3SGR4; DT 20-APR-2010, integrated into UniProtKB/TrEMBL. DT 20-APR-2010, sequence version 1. DT 11-DEC-2013, entry version 15. DE SubName: Full=Uncharacterized protein; GN ORFNames=TK90_2820; OS Thioalkalivibrio sp. (strain K90mix). OG Plasmid pTK9001. OC Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; OC Ectothiorhodospiraceae; Thioalkalivibrio. OX NCBI_TaxID=396595; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=K90mix; PLASMID=pTK9001; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., RA Pitluck S., Foster B., Sun H., Larimer F., Land M., Hauser L., RA Kyrpides N., Ivanova N., Sorokin D.Y., Muyzer G., Woyke T.; RT "Complete sequence of plasmid of Thioalkalivibrio sp. K90mix."; RL Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001906; ADC73305.1; -; Genomic_DNA. DR RefSeq; YP_003494772.1; NC_013930.1. DR EnsemblBacteria; ADC73305; ADC73305; TK90_2820. DR GeneID; 8829232; -. DR KEGG; tkm:TK90_2820; -. DR PATRIC; 32529140; VBIThiSp13812_2772. DR KO; K03198; -. DR BioCyc; TSP396595:GH8D-2876-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 112 AA; 13102 MW; 15DA3287FDF92540 CRC64; MEENEQVDAN GLRKTPVRPS LIEGKRIAGV EANMVIANVT ITLAAVLGLY WYWWIGLSWV THKLLKHIYK KDRDVRKVYI AYARQADRYE AWPRINQKHS HRPKGWGRGM LC // ID D4N5H2_9BACT Unreviewed; 103 AA. AC D4N5H2; DT 18-MAY-2010, integrated into UniProtKB/TrEMBL. DT 18-MAY-2010, sequence version 1. DT 13-NOV-2013, entry version 3. DE SubName: Full=TrbD mating pair formation protein; GN Name=trbD; OS uncultured bacterium pAKD4. OG Plasmid pAKD4. OC Bacteria; environmental samples. OX NCBI_TaxID=743682; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pAKD4; RX PubMed=20018208; DOI=10.1016/j.plasmid.2009.11.005; RA Sen D., Yano H., Suzuki H., Krol J.E., Rogers L., Brown C.J., RA Top E.M.; RT "Comparative genomics of pAKD4, the prototype IncP-1delta plasmid with RT a complete backbone."; RL Plasmid 63:98-107(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GQ983559; ADD63276.1; -; Genomic_DNA. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11889 MW; 5FE2187E39A54050 CRC64; MALRTIPIRR AGNRDNLFMG GDRELVMFSG LLAFALIFSA QELRATVIGL LLWFGALFAC RLMAKSDPKL RFVYLRHRKY KGYYPARSTP FRLNPNSQGK QYK // ID D4SY06_9XANT Unreviewed; 90 AA. AC D4SY06; DT 15-JUN-2010, integrated into UniProtKB/TrEMBL. DT 15-JUN-2010, sequence version 1. DT 19-FEB-2014, entry version 7. DE SubName: Full=Conjugal transfer trbd transmembrane protein; GN Name=trbD; ORFNames=XAUB_29835; OS Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=427081; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ICPB 11122; RX PubMed=20388224; DOI=10.1186/1471-2164-11-238; RA Moreira L.M., Almeida N.F.Jr., Potnis N., Digiampietri L.A., Adi S.S., RA Bortolossi J.C., da Silva A.C., da Silva A.M., de Moraes F.E., RA de Oliveira J.C., de Souza R.F., Fancincani A.P., Ferraz A.L., RA Ferro M.I., Furlan L.R., Gimenez D.F., Jones J.B., Kitajima E.W., RA Laia M.L., Leite R.P.Jr., Nishiyama M.Y., Rodrigues Neto J., RA Nociti L.A., Norman D.J., Ostroski E.H., Pereira H.A.Jr., RA Staskawicz B.J., Tezza R.I., Ferro J.A., Vinatzer B.A., Setubal J.C.; RT "Novel insights into the genomic basis of citrus canker based on the RT genome sequences of two strains of Xanthomonas fuscans subsp. RT aurantifolii."; RL BMC Genomics 11:238-238(2010). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACPX01000208; EFF42907.1; -; Genomic_DNA. DR EnsemblBacteria; EFF42907; EFF42907; XAUB_29835. DR PATRIC; 35674570; VBIXanFus92710_3169. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Membrane; Transmembrane. SQ SEQUENCE 90 AA; 9576 MW; 1E967F831F74A29F CRC64; MSGPDSFAAG FEVPLHRSLT EPLLMGGAPR TVAIANGTLA AAVGLGLQLW IPGVVLWIVG HSLAVWGARV DPQFMQVFAR HIKHKPLLDV // ID D4T0F3_9XANT Unreviewed; 99 AA. AC D4T0F3; DT 15-JUN-2010, integrated into UniProtKB/TrEMBL. DT 15-JUN-2010, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretion system protein VirB3; GN Name=virB3; ORFNames=XAUB_39595; OS Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=427081; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ICPB 11122; RX PubMed=20388224; DOI=10.1186/1471-2164-11-238; RA Moreira L.M., Almeida N.F.Jr., Potnis N., Digiampietri L.A., Adi S.S., RA Bortolossi J.C., da Silva A.C., da Silva A.M., de Moraes F.E., RA de Oliveira J.C., de Souza R.F., Fancincani A.P., Ferraz A.L., RA Ferro M.I., Furlan L.R., Gimenez D.F., Jones J.B., Kitajima E.W., RA Laia M.L., Leite R.P.Jr., Nishiyama M.Y., Rodrigues Neto J., RA Nociti L.A., Norman D.J., Ostroski E.H., Pereira H.A.Jr., RA Staskawicz B.J., Tezza R.I., Ferro J.A., Vinatzer B.A., Setubal J.C.; RT "Novel insights into the genomic basis of citrus canker based on the RT genome sequences of two strains of Xanthomonas fuscans subsp. RT aurantifolii."; RL BMC Genomics 11:238-238(2010). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACPX01000218; EFF42081.1; -; Genomic_DNA. DR EnsemblBacteria; EFF42081; EFF42081; XAUB_39595. DR PATRIC; 35676540; VBIXanFus92710_4143. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 99 AA; 11019 MW; 1135F9549F51C80C CRC64; MSAEEQFHDE GESLVAAMTR PTMVGGLTLA SLAMSFYFPG MAALITRSLW AAALIPVLLL ISYLVCLKDV YLFDIMSAAT HLKTCPNKRF WGCRRYAPR // ID D4T0I0_9XANT Unreviewed; 113 AA. AC D4T0I0; DT 15-JUN-2010, integrated into UniProtKB/TrEMBL. DT 15-JUN-2010, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=VirB3 protein; GN Name=virB3; ORFNames=XAUB_39870; OS Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=427081; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ICPB 11122; RX PubMed=20388224; DOI=10.1186/1471-2164-11-238; RA Moreira L.M., Almeida N.F.Jr., Potnis N., Digiampietri L.A., Adi S.S., RA Bortolossi J.C., da Silva A.C., da Silva A.M., de Moraes F.E., RA de Oliveira J.C., de Souza R.F., Fancincani A.P., Ferraz A.L., RA Ferro M.I., Furlan L.R., Gimenez D.F., Jones J.B., Kitajima E.W., RA Laia M.L., Leite R.P.Jr., Nishiyama M.Y., Rodrigues Neto J., RA Nociti L.A., Norman D.J., Ostroski E.H., Pereira H.A.Jr., RA Staskawicz B.J., Tezza R.I., Ferro J.A., Vinatzer B.A., Setubal J.C.; RT "Novel insights into the genomic basis of citrus canker based on the RT genome sequences of two strains of Xanthomonas fuscans subsp. RT aurantifolii."; RL BMC Genomics 11:238-238(2010). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACPX01000219; EFF42039.1; -; Genomic_DNA. DR EnsemblBacteria; EFF42039; EFF42039; XAUB_39870. DR PATRIC; 35676597; VBIXanFus92710_4171. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 113 AA; 12739 MW; 24A3EAE203C53649 CRC64; MATGSGSAGS RRATYTKDPL FKGCTRPAMI MGVPVVPFVI VGGSLMLVTI WTSIFCIVLV PVAIMVMRHI TKSDDQQFRL LWLKILFRLI NYNRNGSFWR SSAWSPVAFK KRK // ID D4TBJ9_9XANT Unreviewed; 99 AA. AC D4TBJ9; DT 15-JUN-2010, integrated into UniProtKB/TrEMBL. DT 15-JUN-2010, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretion system protein VirB3; GN Name=virB3; ORFNames=XAUC_37095; OS Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=427082; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ICPB 10535; RX PubMed=20388224; DOI=10.1186/1471-2164-11-238; RA Moreira L.M., Almeida N.F.Jr., Potnis N., Digiampietri L.A., Adi S.S., RA Bortolossi J.C., da Silva A.C., da Silva A.M., de Moraes F.E., RA de Oliveira J.C., de Souza R.F., Fancincani A.P., Ferraz A.L., RA Ferro M.I., Furlan L.R., Gimenez D.F., Jones J.B., Kitajima E.W., RA Laia M.L., Leite R.P.Jr., Nishiyama M.Y., Rodrigues Neto J., RA Nociti L.A., Norman D.J., Ostroski E.H., Pereira H.A.Jr., RA Staskawicz B.J., Tezza R.I., Ferro J.A., Vinatzer B.A., Setubal J.C.; RT "Novel insights into the genomic basis of citrus canker based on the RT genome sequences of two strains of Xanthomonas fuscans subsp. RT aurantifolii."; RL BMC Genomics 11:238-238(2010). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACPY01000250; EFF45932.1; -; Genomic_DNA. DR EnsemblBacteria; EFF45932; EFF45932; XAUC_37095. DR PATRIC; 35685938; VBIXanFus21887_4242. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 99 AA; 11019 MW; 1135F9549F51C80C CRC64; MSAEEQFHDE GESLVAAMTR PTMVGGLTLA SLAMSFYFPG MAALITRSLW AAALIPVLLL ISYLVCLKDV YLFDIMSAAT HLKTCPNKRF WGCRRYAPR // ID D4X458_9BURK Unreviewed; 110 AA. AC D4X458; DT 15-JUN-2010, integrated into UniProtKB/TrEMBL. DT 15-JUN-2010, sequence version 1. DT 18-SEP-2013, entry version 5. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=HMPREF0004_0255; OS Achromobacter piechaudii ATCC 43553. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Alcaligenaceae; Achromobacter. OX NCBI_TaxID=742159; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 43553; RA Muzny D., Qin X., Deng J., Jiang H., Liu Y., Qu J., Song X.-Z., RA Zhang L., Thornton R., Coyle M., Francisco L., Jackson L., Javaid M., RA Korchina V., Kovar C., Mata R., Mathew T., Ngo R., Nguyen L., RA Nguyen N., Okwuonu G., Ongeri F., Pham C., Simmons D., RA Wilczek-Boney K., Hale W., Jakkamsetti A., Pham P., Ruth R., RA San Lucas F., Warren J., Zhang J., Zhao Z., Zhou C., Zhu D., Lee S., RA Bess C., Blankenburg K., Forbes L., Fu Q., Gubbala S., Hirani K., RA Jayaseelan J.C., Lara F., Munidasa M., Palculict T., Patil S., RA Pu L.-L., Saada N., Tang L., Weissenberger G., Zhu Y., Hemphill L., RA Shang Y., Youmans B., Ayvaz T., Ross M., Santibanez J., Aqrawi P., RA Gross S., Joshi V., Fowler G., Nazareth L., Reid J., Worley K., RA Petrosino J., Highlander S., Gibbs R., Gibbs R.; RL Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADMS01000010; EFF78405.1; -; Genomic_DNA. DR EnsemblBacteria; EFF78405; EFF78405; HMPREF0004_0255. DR PATRIC; 36773726; VBIAchPie159143_4950. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 110 AA; 12970 MW; F7BC116179AA9811 CRC64; MEERDPVDEL EVEVDQALIE KRRIIGLDRR AAGAFLLLAP LVVLISRSFW MALIAIPMYL GIRYVMRKDP DKIDVYQAYK TQHDHYVPRA TRTQKRNKRP FGFGRDFPCY // ID D4YY68_SPHJU Unreviewed; 116 AA. AC D4YY68; DT 15-JUN-2010, integrated into UniProtKB/TrEMBL. DT 15-JUN-2010, sequence version 1. DT 11-DEC-2013, entry version 16. DE SubName: Full=Type IV secretory pathway VirB3 component; GN Name=virB3; OrderedLocusNames=SJA_C1-04660; OS Sphingobium japonicum (strain NBRC 101211 / UT26S). OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Sphingobium. OX NCBI_TaxID=452662; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NBRC 101211 / UT26S; RX PubMed=20817768; DOI=10.1128/JB.00961-10; RA Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A., RA Fukui S., Fujita N., Tsuda M.; RT "Complete genome sequence of the representative gamma- RT hexachlorocyclohexane-degrading bacterium Sphingobium japonicum RT UT26."; RL J. Bacteriol. 192:5852-5853(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP010803; BAI95300.1; -; Genomic_DNA. DR RefSeq; YP_003543912.1; NC_014006.1. DR EnsemblBacteria; BAI95300; BAI95300; SJA_C1-04660. DR GeneID; 8956829; -. DR KEGG; sjp:SJA_C1-04660; -. DR PATRIC; 35433333; VBISphJap147895_0478. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR BioCyc; SJAP452662:GHEL-477-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 116 AA; 12608 MW; 42CEE75B824477B6 CRC64; MKESAALDER LREETLFLAV TRPTMWLGVP LEASLPIALA ACLTLIVSGN PLYAGAIGGA CLAVARLIVR HDANAFRLLC LWTMTKARNR NRVWWGGSSY SPLPVAGLKR KGFARG // ID D4Z2J9_SPHJU Unreviewed; 93 AA. AC D4Z2J9; DT 15-JUN-2010, integrated into UniProtKB/TrEMBL. DT 15-JUN-2010, sequence version 1. DT 11-DEC-2013, entry version 16. DE SubName: Full=Type IV secretory pathway TrbD component; GN Name=trbD; OrderedLocusNames=SJA_C1-19970; OS Sphingobium japonicum (strain NBRC 101211 / UT26S). OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Sphingobium. OX NCBI_TaxID=452662; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NBRC 101211 / UT26S; RX PubMed=20817768; DOI=10.1128/JB.00961-10; RA Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A., RA Fukui S., Fujita N., Tsuda M.; RT "Complete genome sequence of the representative gamma- RT hexachlorocyclohexane-degrading bacterium Sphingobium japonicum RT UT26."; RL J. Bacteriol. 192:5852-5853(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP010803; BAI96831.1; -; Genomic_DNA. DR RefSeq; YP_003545443.1; NC_014006.1. DR EnsemblBacteria; BAI96831; BAI96831; SJA_C1-19970. DR GeneID; 8956830; -. DR KEGG; sjp:SJA_C1-19970; -. DR PATRIC; 35436174; VBISphJap147895_1876. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR BioCyc; SJAP452662:GHEL-2031-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9829 MW; 4C976EC0D3F4AD9A CRC64; MVGAVDQGNE VPGFTVPVHR ALTEPILLGG APRAIAILNG TLAGAVGLGL RLWLIGIAIW AIGHFAAVWA AKRDPLFVDV VRRHLRVPAH LTV // ID D4Z5C0_SPHJU Unreviewed; 86 AA. AC D4Z5C0; DT 15-JUN-2010, integrated into UniProtKB/TrEMBL. DT 15-JUN-2010, sequence version 1. DT 11-DEC-2013, entry version 16. DE SubName: Full=Conjugal transfer protein TrbD; GN Name=trbD; OrderedLocusNames=SJA_C1-29680; OS Sphingobium japonicum (strain NBRC 101211 / UT26S). OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Sphingobium. OX NCBI_TaxID=452662; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NBRC 101211 / UT26S; RX PubMed=20817768; DOI=10.1128/JB.00961-10; RA Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A., RA Fukui S., Fujita N., Tsuda M.; RT "Complete genome sequence of the representative gamma- RT hexachlorocyclohexane-degrading bacterium Sphingobium japonicum RT UT26."; RL J. Bacteriol. 192:5852-5853(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP010803; BAI97802.1; -; Genomic_DNA. DR RefSeq; YP_003546414.1; NC_014006.1. DR EnsemblBacteria; BAI97802; BAI97802; SJA_C1-29680. DR GeneID; 8956767; -. DR KEGG; sjp:SJA_C1-29680; -. DR PATRIC; 35438058; VBISphJap147895_2802. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR BioCyc; SJAP452662:GHEL-3020-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 86 AA; 9009 MW; CBC4E44C3911A4AC CRC64; MSAIEGFDVP IHASLASPIL LGGAPRGLSI LNGTLAAAIG LGLQIWLVGI AAWAIGHSIA VIATRRDPDF APVLLRHLRQ KGYWAC // ID D4Z946_SPHJU Unreviewed; 93 AA. AC D4Z946; DT 15-JUN-2010, integrated into UniProtKB/TrEMBL. DT 15-JUN-2010, sequence version 1. DT 11-DEC-2013, entry version 17. DE SubName: Full=Conjugal transfer protein TrbD; GN Name=trbD; OrderedLocusNames=SJA_P1-01760; OS Sphingobium japonicum (strain NBRC 101211 / UT26S). OG Plasmid pCHQ1. OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Sphingobium. OX NCBI_TaxID=452662; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NBRC 101211 / UT26S; PLASMID=pCHQ1; RX PubMed=20817768; DOI=10.1128/JB.00961-10; RA Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A., RA Fukui S., Fujita N., Tsuda M.; RT "Complete genome sequence of the representative gamma- RT hexachlorocyclohexane-degrading bacterium Sphingobium japonicum RT UT26."; RL J. Bacteriol. 192:5852-5853(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP010805; BAI99128.1; -; Genomic_DNA. DR RefSeq; YP_003547151.1; NC_014007.1. DR EnsemblBacteria; BAI99128; BAI99128; SJA_P1-01760. DR GeneID; 8957101; -. DR KEGG; sjp:SJA_P1-01760; -. DR PATRIC; 35439331; VBISphJap147895_3433. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR BioCyc; SJAP452662:GHEL-4361-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 93 AA; 9862 MW; A9F42B066793AC8D CRC64; MAGGADYVGE IPGFSVPVHR ALTEHILLGG APRSIAILNG TLAAALGLGL RLWLVGLALW AIGHFAAVWA AKRDPQFVDV GRRHLRIPAY LTV // ID D5AW21_RICPP Unreviewed; 95 AA. AC D5AW21; DT 15-JUN-2010, integrated into UniProtKB/TrEMBL. DT 15-JUN-2010, sequence version 1. DT 14-MAY-2014, entry version 11. DE SubName: Full=VirB3; GN Name=virB3; OrderedLocusNames=rpr22_CDS096; OS Rickettsia prowazekii (strain Rp22). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; typhus group. OX NCBI_TaxID=449216; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Rp22; RX PubMed=20368341; DOI=10.1101/gr.103564.109; RA Bechah Y., El Karkouri K., Mediannikov O., Leroy Q., Pelletier N., RA Robert C., Medigue C., Mege J.L., Raoult D.; RT "Genomic, proteomic, and transcriptomic analysis of virulent and RT avirulent Rickettsia prowazekii reveals its adaptive mutation RT capabilities."; RL Genome Res. 20:655-663(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001584; ADE29610.1; -; Genomic_DNA. DR RefSeq; YP_005998508.1; NC_017560.1. DR EnsemblBacteria; ADE29610; ADE29610; rpr22_CDS096. DR GeneID; 12587855; -. DR KEGG; rpq:rpr22_CDS096; -. DR PATRIC; 36792852; VBIRicPro89493_0100. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR BioCyc; RPRO449216:GLJI-103-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10786 MW; 5F0C444AFE267B3E CRC64; MSGTLASDLL FVGLTRPTMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AGALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID D5K9I1_NEIGO Unreviewed; 105 AA. AC D5K9I1; DT 15-JUN-2010, integrated into UniProtKB/TrEMBL. DT 15-JUN-2010, sequence version 1. DT 13-NOV-2013, entry version 4. DE SubName: Full=TrbD; OS Neisseria gonorrhoeae. OG Plasmid pEP5289. OC Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; OC Neisseriaceae; Neisseria. OX NCBI_TaxID=485; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=5289; PLASMID=pEP5289; RX PubMed=20376355; DOI=10.1371/journal.pone.0009962; RA Pachulec E., van der Does C.; RT "Conjugative plasmids of Neisseria gonorrhoeae."; RL PLoS ONE 5:E9962-E9962(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GU479466; ADF36653.1; -; Genomic_DNA. DR RefSeq; YP_003600452.1; NC_014105.1. DR GeneID; 9120702; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 105 AA; 12346 MW; 4105346EA1A8E0BB CRC64; MRAIRTIPIR RVANRPNLFW GGDREMVQVS LLITFVLVVA AQNTYAFVIG LVFWFFALYA LRKLAKYDPL LRFVGLRSIT KYKRFYPPHS TPFRNNTSTQ GNRYK // ID D5QDN3_KOMHA Unreviewed; 91 AA. AC D5QDN3; DT 13-JUL-2010, integrated into UniProtKB/TrEMBL. DT 13-JUL-2010, sequence version 1. DT 14-MAY-2014, entry version 8. DE SubName: Full=Putative conjugal transfer protein TrbD; GN ORFNames=GXY_06218; OS Gluconacetobacter hansenii ATCC 23769. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Acetobacteraceae; Komagataeibacter. OX NCBI_TaxID=714995; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 23769; RX PubMed=20543071; DOI=10.1128/JB.00588-10; RA Iyer P.R., Geib S.M., Catchmark J., Kao T.H., Tien M.; RT "Genome sequence of a cellulose-producing bacterium, Gluconacetobacter RT hansenii ATCC 23769."; RL J. Bacteriol. 192:4256-4257(2010). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADTV01000019; EFG84831.1; -; Genomic_DNA. DR EnsemblBacteria; EFG84831; EFG84831; GXY_06218. DR PATRIC; 38000195; VBIGluHan153203_0419. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 91 AA; 9966 MW; DCBCB7B73E5C4071 CRC64; MADYNDDAVP GFHVPVHRSL TDPILLGGAP RAVAIANGTL AAAIALGLRL WLIGAAFWIV GHTLAVWGAR RDPFFIEVGR RHLRYPAWLR V // ID D5QDY7_KOMHA Unreviewed; 88 AA. AC D5QDY7; DT 13-JUL-2010, integrated into UniProtKB/TrEMBL. DT 13-JUL-2010, sequence version 1. DT 14-MAY-2014, entry version 9. DE SubName: Full=Putative conjugal transfer protein TrbD; GN ORFNames=GXY_06750; OS Gluconacetobacter hansenii ATCC 23769. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Acetobacteraceae; Komagataeibacter. OX NCBI_TaxID=714995; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 23769; RX PubMed=20543071; DOI=10.1128/JB.00588-10; RA Iyer P.R., Geib S.M., Catchmark J., Kao T.H., Tien M.; RT "Genome sequence of a cellulose-producing bacterium, Gluconacetobacter RT hansenii ATCC 23769."; RL J. Bacteriol. 192:4256-4257(2010). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADTV01000023; EFG84778.1; -; Genomic_DNA. DR EnsemblBacteria; EFG84778; EFG84778; GXY_06750. DR PATRIC; 38000371; VBIGluHan153203_0632. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 88 AA; 9416 MW; F12F8A0AFE22E9B6 CRC64; MEPDSIPGFT APVHRALIEP ILLGGAPRTV AIVTGTLSAA IGLGLRLWIA GGIFWLVGHL AAVWAAKRDP AFVDVVRRHL RYPTHMVG // ID D5T6G8_LEGP2 Unreviewed; 99 AA. AC D5T6G8; DT 13-JUL-2010, integrated into UniProtKB/TrEMBL. DT 13-JUL-2010, sequence version 1. DT 01-MAY-2013, entry version 11. DE SubName: Full=Conjugal transfer protein trbD; GN Name=trbD; OrderedLocusNames=lpa_00226; OS Legionella pneumophila serogroup 1 (strain 2300/99 Alcoy). OC Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; OC Legionellaceae; Legionella. OX NCBI_TaxID=423212; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=2300/99 Alcoy; RX PubMed=20236513; DOI=10.1186/1471-2164-11-181; RA D'Auria G., Jimenez-Hernandez N., Peris-Bondia F., Moya A., RA Latorre A.; RT "Legionella pneumophila pangenome reveals strain-specific virulence RT factors."; RL BMC Genomics 11:181-181(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001828; ADG23408.1; -; Genomic_DNA. DR RefSeq; YP_003617360.1; NC_014125.1. DR EnsemblBacteria; ADG23408; ADG23408; lpa_00226. DR GeneID; 9127919; -. DR KEGG; lpa:lpa_00226; -. DR PATRIC; 38178084; VBILegPne70474_0176. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR BioCyc; LPNE423212:GHRR-165-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 99 AA; 11411 MW; F0F221859B8DF442 CRC64; MSLRTIPIRK CGNRPNLFLG GDRELVMFSG LLSAILVFAA QDWLAAIAGM VMWFLSLKGL RLMAKSDPFM RAIYLRQRSY QAYYAPRSTP FRENKRGYQ // ID D5T8U8_LEGP2 Unreviewed; 73 AA. AC D5T8U8; DT 13-JUL-2010, integrated into UniProtKB/TrEMBL. DT 13-JUL-2010, sequence version 1. DT 01-MAY-2013, entry version 11. DE SubName: Full=TrbD Conjugal transfer protein trbD; GN Name=trbD; OrderedLocusNames=lpa_00800; OS Legionella pneumophila serogroup 1 (strain 2300/99 Alcoy). OC Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; OC Legionellaceae; Legionella. OX NCBI_TaxID=423212; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=2300/99 Alcoy; RX PubMed=20236513; DOI=10.1186/1471-2164-11-181; RA D'Auria G., Jimenez-Hernandez N., Peris-Bondia F., Moya A., RA Latorre A.; RT "Legionella pneumophila pangenome reveals strain-specific virulence RT factors."; RL BMC Genomics 11:181-181(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001828; ADG23834.1; -; Genomic_DNA. DR RefSeq; YP_003617786.1; NC_014125.1. DR EnsemblBacteria; ADG23834; ADG23834; lpa_00800. DR GeneID; 9128354; -. DR KEGG; lpa:lpa_00800; -. DR PATRIC; 38179004; VBILegPne70474_0626. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR BioCyc; LPNE423212:GHRR-600-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 73 AA; 8525 MW; 59D02987F5513D6F CRC64; MFSGLLSAIL VFAAQDWLAA IAGIVMWFLS LKGLRLMAKS DPYMRAVYLR QRRYQAYYPA RSTPFRENKR GYQ // ID D5VKD3_CAUST Unreviewed; 88 AA. AC D5VKD3; DT 13-JUL-2010, integrated into UniProtKB/TrEMBL. DT 13-JUL-2010, sequence version 1. DT 16-OCT-2013, entry version 16. DE SubName: Full=Conjugal transfer protein TrbD; GN OrderedLocusNames=Cseg_2501; OS Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC OS 15250 / LMG 17158 / TK0059) (Mycoplana segnis). OC Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; OC Caulobacteraceae; Caulobacter. OX NCBI_TaxID=509190; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / RC TK0059; RX PubMed=21705585; DOI=10.1128/JB.05453-11; RG US DOE Joint Genome Institute; RA Brown P.J., Kysela D.T., Buechlein A., Hemmerich C., Brun Y.V.; RT "Genome sequences of eight morphologically diverse RT alphaproteobacteria."; RL J. Bacteriol. 193:4567-4568(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002008; ADG10956.1; -; Genomic_DNA. DR RefSeq; YP_003593574.1; NC_014100.1. DR EnsemblBacteria; ADG10956; ADG10956; Cseg_2501. DR GeneID; 9104009; -. DR KEGG; cse:Cseg_2501; -. DR PATRIC; 37205091; VBICauSeg118057_2546. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; HGLAVWA; -. DR BioCyc; CSEG509190:GHVG-2537-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 88 AA; 9344 MW; FD16F14FADCB60EA CRC64; MGADRAIGFA APVHRALTEP MLLAGAPRAI ALVNGTLAAA LGLGLRLWIV GLLVWLVGHG LAVWAARHDP QIVEVGRRHV RLPAYLEV // ID D5WN87_BURSC Unreviewed; 126 AA. AC D5WN87; DT 13-JUL-2010, integrated into UniProtKB/TrEMBL. DT 13-JUL-2010, sequence version 1. DT 13-NOV-2013, entry version 16. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=BC1002_6978; OS Burkholderia sp. (strain CCGE1002). OG Plasmid pBC201. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia. OX NCBI_TaxID=640511; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CCGE1002; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., RA Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., RA Hauser L., Kyrpides N., Ovchinnikova G., Martinez-Romero E., RA Hernandez M.A.R., Tiedje J.M., Woyke T.; RT "Complete sequence of plasmid 1 of Burkholderia sp. CCGE1002."; RL Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002016; ADG20766.1; -; Genomic_DNA. DR RefSeq; YP_003610277.1; NC_014120.1. DR EnsemblBacteria; ADG20766; ADG20766; BC1002_6978. DR GeneID; 9115104; -. DR KEGG; bge:BC1002_6978; -. DR PATRIC; 37222945; VBIBurSp41388_6995. DR HOGENOM; HOG000001532; -. DR KO; K03198; -. DR BioCyc; BSP640511:GJ7J-7071-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 126 AA; 14364 MW; C19AE168498D77AA CRC64; MGGSGEQAID TQHADPRDVT GEPDDPLAAR IRKTMLEQFL LLGIDRRWCI AEVAIVITFA AGMRNAWVLL AVLVTHQVLW LAVRRDPDQI RCYTRYSRQG DYYEPRQLLR QKVNARPKGF ARGLPC // ID D5WNT3_BURSC Unreviewed; 87 AA. AC D5WNT3; DT 13-JUL-2010, integrated into UniProtKB/TrEMBL. DT 13-JUL-2010, sequence version 1. DT 13-NOV-2013, entry version 16. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=BC1002_7222; OS Burkholderia sp. (strain CCGE1002). OG Plasmid pBC201. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia. OX NCBI_TaxID=640511; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CCGE1002; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., RA Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., RA Hauser L., Kyrpides N., Ovchinnikova G., Martinez-Romero E., RA Hernandez M.A.R., Tiedje J.M., Woyke T.; RT "Complete sequence of plasmid 1 of Burkholderia sp. CCGE1002."; RL Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002016; ADG20962.1; -; Genomic_DNA. DR RefSeq; YP_003610473.1; NC_014120.1. DR EnsemblBacteria; ADG20962; ADG20962; BC1002_7222. DR GeneID; 9115348; -. DR KEGG; bge:BC1002_7222; -. DR PATRIC; 37223351; VBIBurSp41388_7198. DR HOGENOM; HOG000263306; -. DR KO; K03198; -. DR BioCyc; BSP640511:GJ7J-7315-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 87 AA; 9979 MW; FF532B5E53AEB310 CRC64; MGGADRGLAI ANGTMTMLLC YTSMTPTFLV VGIAVHWLLR WKSAKDPWWK QVMLVYNRYA DVYEPLPTAK FSARFKRPYG FDQDLPC // ID D5X2K1_THIK1 Unreviewed; 99 AA. AC D5X2K1; DT 13-JUL-2010, integrated into UniProtKB/TrEMBL. DT 13-JUL-2010, sequence version 1. DT 29-MAY-2013, entry version 13. DE SubName: Full=Conjugal transfer TrbD family protein; GN OrderedLocusNames=Tint_1972; OS Thiomonas intermedia (strain K12) (Thiobacillus intermedius). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Thiomonas. OX NCBI_TaxID=75379; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=K12; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., RA Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., RA Hauser L., Kyrpides N., Ovchinnikova G., Kerfeld C.A., Cannon G.C., RA Heinhorst S., Woyke T.; RT "Complete sequence of Thiomonas intermedia K12."; RL Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002021; ADG31334.1; -; Genomic_DNA. DR RefSeq; YP_003643664.1; NC_014153.1. DR EnsemblBacteria; ADG31334; ADG31334; Tint_1972. DR GeneID; 9152706; -. DR KEGG; tin:Tint_1972; -. DR PATRIC; 38294499; VBIThiInt85915_2000. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR BioCyc; TINT75379:GH6C-2002-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 99 AA; 11107 MW; 6C5F889D309AC1FE CRC64; MNDTQTPIHD SLNRPILMMG GERQLVLLLA IVAGIFIFSL AKLWAALVGV TLWMVGQWAL SRAAAYDPIL SKTGSRLLKY RRYYPAQASP FAKDREVRS // ID D6BE80_FUSNU Unreviewed; 87 AA. AC D6BE80; DT 13-JUL-2010, integrated into UniProtKB/TrEMBL. DT 13-JUL-2010, sequence version 1. DT 18-SEP-2013, entry version 5. DE SubName: Full=Predicted protein; GN ORFNames=PSAG_00512; OS Fusobacterium nucleatum subsp. animalis D11. OC Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; OC Fusobacterium. OX NCBI_TaxID=556264; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=D11; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Zeng Q., Koehrsen M., Alvarado L., Berlin A., RA Borenstein D., Chen Z., Engels R., Freedman E., Gellesch M., RA Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., Howarth C., RA Jen D., Larson L., Lewis B., Mehta T., Park D., Pearson M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA Walk T., White J., Yandava C., Allen-Vercoe E., Strauss J., Sibley C., RA White A., Ambrose C., Lander E., Nusbaum C., Galagan J., Birren B.; RT "Annotation of Fusobacterium sp. D11."; RL Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EQ999804; EFD80477.2; -; Genomic_DNA. DR EnsemblBacteria; EFD80477; EFD80477; PSAG_00512. DR PATRIC; 28733246; VBIFusSp99290_0709. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 87 AA; 10143 MW; 70B6D5C23D0C09E9 CRC64; MEDLEELKIP VCQGLIKPLT IAGISREAMI LNVGFAASFV LAVRAWFMLP LFFFTHYLLY LACKKDPDVI KIFMKKYIKQ KNYFYEG // ID D6CK34_XANAP Unreviewed; 122 AA. AC D6CK34; DT 13-JUL-2010, integrated into UniProtKB/TrEMBL. DT 13-JUL-2010, sequence version 1. DT 19-FEB-2014, entry version 11. DE SubName: Full=Probable conjugal transfer protein; GN Name=virB3; OrderedLocusNames=XALr_3260; OS Xanthomonas albilineans (strain GPE PC73 / CFBP 7063). OG Plasmid plasmIII. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=380358; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=GPE PC73 / CFBP 7063; RA Pieretti I., Royer M., Barbe V., Carrere S., Koebnik R., RA Cociancich S., Couloux A., Darrasse A., Gouzy J., Jacques M.A., RA Lauber E., Manceau C., Mangenot S., Poussier S., Segurens B., RA Szurek B., Verdier V., Arlat M., Rott P.; RT "The complete genome sequence of Xanthomonas albilineans provides new RT insights into the reductive genome evolution of the xylem-limited RT Xanthomonadaceae."; RL BMC Genomics 10:616-616(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FP340277; CAZ15848.1; -; Genomic_DNA. DR RefSeq; YP_005994917.1; NC_017555.1. DR GeneID; 12586788; -. DR KEGG; xal:XALr_3260; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 122 AA; 14497 MW; 72CAB4B95FB9533B CRC64; MSKNNGIIVD TLFVGPTRPT MFWGVTWQAF VINIIVTMEA FIWTRDLRWL LLFVPIHGIC FLICMRDPRT FELLMQWGPT KGFAFFGNFP YWRAATFSPL ELHIPPKRSF FRRRKRKSRK AP // ID D6CK95_XANAP Unreviewed; 106 AA. AC D6CK95; DT 13-JUL-2010, integrated into UniProtKB/TrEMBL. DT 13-JUL-2010, sequence version 1. DT 19-FEB-2014, entry version 11. DE SubName: Full=Probable conjugal transfer protein; GN Name=traA; OrderedLocusNames=XALq_3227; OS Xanthomonas albilineans (strain GPE PC73 / CFBP 7063). OG Plasmid plasmII. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=380358; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=GPE PC73 / CFBP 7063; RA Pieretti I., Royer M., Barbe V., Carrere S., Koebnik R., RA Cociancich S., Couloux A., Darrasse A., Gouzy J., Jacques M.A., RA Lauber E., Manceau C., Mangenot S., Poussier S., Segurens B., RA Szurek B., Verdier V., Arlat M., Rott P.; RT "The complete genome sequence of Xanthomonas albilineans provides new RT insights into the reductive genome evolution of the xylem-limited RT Xanthomonadaceae."; RL BMC Genomics 10:616-616(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FP340278; CAZ15884.1; -; Genomic_DNA. DR RefSeq; YP_005994953.1; NC_017556.1. DR GeneID; 12586825; -. DR KEGG; xal:XALq_3227; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 106 AA; 11876 MW; 84232FB600CEDC12 CRC64; MPIGNSGRFP LFRGATRLPT FAGVPRTAFL ATFVTCATLF LTIHLWALAL FALAWFIEFC IAKHDDRIFR IIALAVRTKG LNSINSPFTK KWGGSSYSPV DYYEGR // ID D6CKB8_XANAP Unreviewed; 106 AA. AC D6CKB8; DT 13-JUL-2010, integrated into UniProtKB/TrEMBL. DT 13-JUL-2010, sequence version 1. DT 19-FEB-2014, entry version 11. DE SubName: Full=Probable conjugal transfer protein; GN Name=trwM; OrderedLocusNames=XALp_3188; OS Xanthomonas albilineans (strain GPE PC73 / CFBP 7063). OG Plasmid plasmI. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=380358; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=GPE PC73 / CFBP 7063; RA Pieretti I., Royer M., Barbe V., Carrere S., Koebnik R., RA Cociancich S., Couloux A., Darrasse A., Gouzy J., Jacques M.A., RA Lauber E., Manceau C., Mangenot S., Poussier S., Segurens B., RA Szurek B., Verdier V., Arlat M., Rott P.; RT "The complete genome sequence of Xanthomonas albilineans provides new RT insights into the reductive genome evolution of the xylem-limited RT Xanthomonadaceae."; RL BMC Genomics 10:616-616(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FP340279; CAZ15907.1; -; Genomic_DNA. DR RefSeq; YP_005994976.1; NC_017557.1. DR GeneID; 12586849; -. DR KEGG; xal:XALp_3188; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 106 AA; 12280 MW; A440843F826B9D0B CRC64; MNKPQQNAFP LFKGATRTPL FMGVPLLPLI FVVFLVFIPA ALVSIWCWAA LVPLYFTMRL IVKHDDRAFS IWGLWLDTSL RNRNKGFWKA SSYAPATYHK KDRHGR // ID D6CUJ6_THIA3 Unreviewed; 99 AA. AC D6CUJ6; DT 13-JUL-2010, integrated into UniProtKB/TrEMBL. DT 13-JUL-2010, sequence version 1. DT 14-MAY-2014, entry version 13. DE SubName: Full=Putative Type IV secretory pathway, TrbD component; GN OrderedLocusNames=THI_2326; OS Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Thiomonas. OX NCBI_TaxID=426114; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=3As; RA Genoscope - CEA; RL Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 22701 / CIP 110005 / 3As; RX PubMed=20195515; DOI=10.1371/journal.pgen.1000859; RA Arsene-Ploetze F., Koechler S., Marchal M., Coppee J.Y., Chandler M., RA Bonnefoy V., Brochier-Armanet C., Barakat M., Barbe V., RA Battaglia-Brunet F., Bruneel O., Bryan C.G., Cleiss-Arnold J., RA Cruveiller S., Erhardt M., Heinrich-Salmeron A., Hommais F., RA Joulian C., Krin E., Lieutaud A., Lievremont D., Michel C., Muller D., RA Ortet P., Proux C., Siguier P., Roche D., Rouy Z., Salvignol G., RA Slyemi D., Talla E., Weiss S., Weissenbach J., Medigue C., RA Bertin P.N.; RT "Structure, function, and evolution of the Thiomonas spp. genome."; RL PLoS Genet. 6:E1000859-E1000859(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FP475956; CAZ88965.1; -; Genomic_DNA. DR RefSeq; YP_003624777.1; NC_014145.1. DR EnsemblBacteria; CAZ88965; CAZ88965; THI_2326. DR GeneID; 13881129; -. DR KEGG; thi:THI_2326; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 99 AA; 11091 MW; B5F38854B286C56D CRC64; MNDTKSPIHD SLNRPILMMG GERQLVLLLA IIAGIFIFSL AKLWAAVIGI TLWMVGQWAL SRAAAYDPIL SKTGGRLLKY RRYYPAQASP FAKDREVRS // ID D6CVW5_THIA3 Unreviewed; 107 AA. AC D6CVW5; DT 13-JUL-2010, integrated into UniProtKB/TrEMBL. DT 13-JUL-2010, sequence version 1. DT 14-MAY-2014, entry version 13. DE SubName: Full=Type IV secretory pathway, VirB3 component; GN Name=virB3; OrderedLocusNames=THI_p0058; OS Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As). OG Plasmid pTHI. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Thiomonas. OX NCBI_TaxID=426114; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=3As; RA Genoscope - CEA; RL Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 22701 / CIP 110005 / 3As; RX PubMed=20195515; DOI=10.1371/journal.pgen.1000859; RA Arsene-Ploetze F., Koechler S., Marchal M., Coppee J.Y., Chandler M., RA Bonnefoy V., Brochier-Armanet C., Barakat M., Barbe V., RA Battaglia-Brunet F., Bruneel O., Bryan C.G., Cleiss-Arnold J., RA Cruveiller S., Erhardt M., Heinrich-Salmeron A., Hommais F., RA Joulian C., Krin E., Lieutaud A., Lievremont D., Michel C., Muller D., RA Ortet P., Proux C., Siguier P., Roche D., Rouy Z., Salvignol G., RA Slyemi D., Talla E., Weiss S., Weissenbach J., Medigue C., RA Bertin P.N.; RT "Structure, function, and evolution of the Thiomonas spp. genome."; RL PLoS Genet. 6:E1000859-E1000859(2010). RN [3] RP NUCLEOTIDE SEQUENCE. RC STRAIN=3As; RA Arsene-Ploetze F., Koechler S., Marchal M., Coppee J.-.Y., RA Chandler M., Bonnefoy V., Brochier-Armanet C., Barakat M., Barbe V., RA Battaglia-Brunet F., Bruneel O., Bryan C.G., Cleiss-Arnold J., RA Cruveiller S., Erhardt M., Heinrich-Salmeron A., Hommais F., RA Joulian C., Krin E., Lieutaud A., Lievremont D., Michel C., Muller D., RA Ortet P., Proux C., Siguier P., Roche D., Rouy Z., Salvignol G., RA Slyemi D., Talla E., Weiss S., Weissenbach J., Medigue C., RA Bertin P.N.; RT "Structure, function, and evolution of the Thiomonas spp. genome."; RL PLoS Genet. 6:0-0(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FP475957; CAZ90454.1; -; Genomic_DNA. DR RefSeq; YP_003622625.1; NC_014144.1. DR EnsemblBacteria; CAZ90454; CAZ90454; THI_p0058. DR GeneID; 9134656; -. DR KEGG; thi:THI_p0058; -. DR KO; K03198; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 107 AA; 11554 MW; 2EF6F3DBEBAD48C7 CRC64; MQDEELHTDP LFAGLTRPAT VAGVPLTAFV IEALIVIVAF LASKNIFTFL LAIPLHGALY ALSAKDGGIF HELMLAAQTN APVQNRSVWE GAASFSPVKQ RKPRKLL // ID D6LCU4_FUSNV Unreviewed; 88 AA. AC D6LCU4; DT 13-JUL-2010, integrated into UniProtKB/TrEMBL. DT 13-JUL-2010, sequence version 1. DT 16-APR-2014, entry version 6. DE SubName: Full=Uncharacterized protein; GN ORFNames=HMPREF0405_01289; OS Fusobacterium nucleatum subsp. vincentii 3_1_27. OC Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; OC Fusobacterium. OX NCBI_TaxID=469602; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=3_1_27; RG The Broad Institute Genome Sequencing Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Strauss J., Ambrose C.E., RA Allen-Vercoe E., Walker B., Young S.K., Zeng Q., Gargeya S., RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M., RA Berlin A.M., Chapman S.B., Goldberg J., Griggs A., Gujja S., RA Hansen M., Howarth C., Imamovic A., Larimer J., McCowen C., RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., RA Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J., RA Nusbaum C., Birren B.; RT "The Genome Sequence of Fusobacterium sp. 3_1_27."; RL Submitted (JAN-2014) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP007064; EFG35008.1; -; Genomic_DNA. DR EnsemblBacteria; EFG35008; EFG35008; HMPREF0405_01289. DR PATRIC; 36481161; VBIFusSp21485_1478. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 88 AA; 10297 MW; 430E7EB70002BEBD CRC64; MEEELDGFQV PVCQGLVKPI TILGISREAM ILNVATAAIF VLSLRLYYLF WVFFITHYLL FRACKKDPEV INIFLKKYIR QLDYYGEG // ID D6LR99_9RHIZ Unreviewed; 116 AA. AC D6LR99; DT 13-JUL-2010, integrated into UniProtKB/TrEMBL. DT 13-JUL-2010, sequence version 1. DT 11-DEC-2013, entry version 8. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BAZG_02037; OS Brucella sp. NVSL 07-0026. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=520448; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NVSL 07-0026; RG The Broad Institute Genome Sequencing Platform; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Ward D., Tsolis R., Young S., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A.M., Borenstein D., Chapman S.B., Chen Z., Engels R., RA Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., RA Heilman E.R., Heiman D.I., Hepburn T.A., Howarth C., Jen D., RA Larson L., Lewis B., Mehta T., Park D., Pearson M., Richards J., RA Roberts A., Saif S., Shea T.D., Shenoy N., Sisk P., Stolte C., RA Sykes S.N., Walk T., White J., Yandava C., Haas B., Henn M.R., RA Nusbaum C., Birren B.; RT "The Genome Sequence of Brucella sp. NVSL 07-0026."; RL Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG770511; EFG35749.2; -; Genomic_DNA. DR ProteinModelPortal; D6LR99; -. DR EnsemblBacteria; EFG35749; EFG35749; BAZG_02037. DR PATRIC; 35171639; VBIBruSp103899_2450. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID D6Q021_ANAMA Unreviewed; 98 AA. AC D6Q021; DT 13-JUL-2010, integrated into UniProtKB/TrEMBL. DT 13-JUL-2010, sequence version 1. DT 10-AUG-2010, entry version 2. DE SubName: Full=Virb3; OS Anaplasma marginale. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Anaplasma. OX NCBI_TaxID=770; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NE-Brazil; RA Guedes Junior D.S., Araujo F.R., Ramos C.A.N.; RT "Analysis of membrane protein genes in a Brazilian isolate of RT Anaplasma marginale."; RL Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GU991632; ADF87330.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 11111 MW; 3AF2270396562EC6 CRC64; MSSGSVKTDQ LFKGLTRPTM LFGVSYTFAI LNFMISIMLF MYSNDFRVLL VLAPGMHAIG FAASAKDPLF MDLFVIKMQK CSKCLNRFYH NANSYDVM // ID D6V0X2_9BRAD Unreviewed; 91 AA. AC D6V0X2; DT 10-AUG-2010, integrated into UniProtKB/TrEMBL. DT 10-AUG-2010, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN ORFNames=AfiDRAFT_1339; OS Afipia sp. 1NLS2. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Afipia. OX NCBI_TaxID=666684; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=1NLS2; RG US DOE Joint Genome Institute (JGI-PGF); RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., RA Pitluck S., Land M.L., Hauser L., Chang Y.-J., Jeffries C., Prakah O., RA Elkins J.G., Brown S.D., Palumbo A.V., Hemme C., Zhou J., Watson D.B., RA Jardine P.M., Kostka J.E., Green S.J., Woyke T.J.; RT "The draft genome of Afipia sp. 1NLS2."; RL Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADVZ01000001; EFI53352.1; -; Genomic_DNA. DR EnsemblBacteria; EFI53352; EFI53352; AfiDRAFT_1339. DR PATRIC; 38094623; VBIAfiSp150213_1334. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 91 AA; 9623 MW; 25A7A3752889D932 CRC64; MAAIVDPDVP GFFAPVHRAL TDPVLMGGAP RTVAIANGTL AAAIALGLRL WIPGALIWAV GHTAAVWAAK RDPQFVDVVR RHLRYPAHLG V // ID D6V4H6_9BRAD Unreviewed; 93 AA. AC D6V4H6; DT 10-AUG-2010, integrated into UniProtKB/TrEMBL. DT 10-AUG-2010, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Conjugal transfer protein TrbB; GN ORFNames=AfiDRAFT_0843; OS Afipia sp. 1NLS2. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Afipia. OX NCBI_TaxID=666684; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=1NLS2; RG US DOE Joint Genome Institute (JGI-PGF); RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., RA Pitluck S., Land M.L., Hauser L., Chang Y.-J., Jeffries C., Prakah O., RA Elkins J.G., Brown S.D., Palumbo A.V., Hemme C., Zhou J., Watson D.B., RA Jardine P.M., Kostka J.E., Green S.J., Woyke T.J.; RT "The draft genome of Afipia sp. 1NLS2."; RL Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADVZ01000001; EFI52856.1; -; Genomic_DNA. DR EnsemblBacteria; EFI52856; EFI52856; AfiDRAFT_0843. DR PATRIC; 38093625; VBIAfiSp150213_0839. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 93 AA; 9978 MW; 4471599FB45011B5 CRC64; MAVAFEQLDA VPGFTAPVHR ALTEHIMLGG APRSIAIMNS TLAGAVGLGL RLWLVGLVIW AIGHFAAVWA AKRDPLFVEV GRRHLRIPAF LAV // ID D6V511_9BRAD Unreviewed; 89 AA. AC D6V511; DT 10-AUG-2010, integrated into UniProtKB/TrEMBL. DT 10-AUG-2010, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Putative conjugal transfer protein TrbD; GN ORFNames=AfiDRAFT_1028; OS Afipia sp. 1NLS2. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Afipia. OX NCBI_TaxID=666684; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=1NLS2; RG US DOE Joint Genome Institute (JGI-PGF); RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., RA Pitluck S., Land M.L., Hauser L., Chang Y.-J., Jeffries C., Prakah O., RA Elkins J.G., Brown S.D., Palumbo A.V., Hemme C., Zhou J., Watson D.B., RA Jardine P.M., Kostka J.E., Green S.J., Woyke T.J.; RT "The draft genome of Afipia sp. 1NLS2."; RL Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADVZ01000001; EFI53041.1; -; Genomic_DNA. DR EnsemblBacteria; EFI53041; EFI53041; AfiDRAFT_1028. DR PATRIC; 38094005; VBIAfiSp150213_1028. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 89 AA; 9528 MW; 40D74133C9D26660 CRC64; MEQDALVTGF YAPVHRALTE PILLGGAPRA VAIVNGTLAA AVGLGLRLWI VGGAIWLIGH VAAVWAAKRD PAFVDVVRRH LRYPQHLVS // ID D7H5G1_BRUAO Unreviewed; 116 AA. AC D7H5G1; DT 10-AUG-2010, integrated into UniProtKB/TrEMBL. DT 10-AUG-2010, sequence version 1. DT 11-DEC-2013, entry version 10. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BAYG_02809; OS Brucella abortus bv. 5 str. B3196. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=520453; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=B3196; RG The Broad Institute Genome Sequencing Platform; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Ward D., Whatmore A.M., Perrett L.L., O'Callaghan D., Young S., RA Zeng Q., Koehrsen M., Alvarado L., Berlin A.M., Borenstein D., RA Chapman S.B., Chen Z., Engels R., Freedman E., Gellesch M., RA Goldberg J., Griggs A., Gujja S., Heilman E.R., Heiman D.I., RA Hepburn T.A., Howarth C., Jen D., Larson L., Lewis B., Mehta T., RA Park D., Pearson M., Richards J., Roberts A., Saif S., Shea T.D., RA Shenoy N., Sisk P., Stolte C., Sykes S.N., Walk T., White J., RA Yandava C., Haas B., Henn M.R., Nusbaum C., Birren B.; RT "The Genome Sequence of Brucella abortus bv. 5 str. B3196."; RL Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG774528; EFH33263.1; -; Genomic_DNA. DR ProteinModelPortal; D7H5G1; -. DR EnsemblBacteria; EFH33263; EFH33263; BAYG_02809. DR PATRIC; 37832181; VBIBruAbo58081_2853. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID D7JNS0_ECOLX Unreviewed; 912 AA. AC D7JNS0; DT 10-AUG-2010, integrated into UniProtKB/TrEMBL. DT 10-AUG-2010, sequence version 1. DT 16-APR-2014, entry version 10. DE SubName: Full=Type IV secretion/conjugal transfer ATPase; GN ORFNames=ECFG_00836; OS Escherichia coli FVEC1302. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=656379; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=FVEC1302; RG The Broad Institute Genome Sequencing Platform; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Feldgarden M., Gordon D.M., Johnson J.R., Johnston B.D., Young S., RA Zeng Q., Koehrsen M., Alvarado L., Berlin A.M., Borenstein D., RA Chapman S.B., Chen Z., Engels R., Freedman E., Gellesch M., RA Goldberg J., Griggs A., Gujja S., Heilman E.R., Heiman D.I., RA Hepburn T.A., Howarth C., Jen D., Larson L., Lewis B., Mehta T., RA Park D., Pearson M., Richards J., Roberts A., Saif S., Shea T.D., RA Shenoy N., Sisk P., Stolte C., Sykes S.N., Walk T., White J., RA Yandava C., Haas B., Henn M.R., Nusbaum C., Birren B.; RT "The Genome Sequence of Escherichia coli FVEC1302."; RL Submitted (JAN-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG774912; EFI20075.1; -; Genomic_DNA. DR EnsemblBacteria; EFI20075; EFI20075; ECFG_00836. DR PATRIC; 37838431; VBIEscCol146434_2480. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 912 AA; 103120 MW; 064B76C193106205 CRC64; MAKLLKAMKR PAALWGVPMV PLLAVTGVTI IVAVWTSVAL LFLLPVEFLV MKSLTRNEPM RFNLIAVWLR VKGKPVANRL FGATTLMPVE HEAVDIKEFL DAMKLNQCAT IKKYIPYSSH IHQHVVRSPK SDLYCTWELM GTPFDCESDE SLQFGTNQLH GLIHSFEGMP VTFYIHNDRN TFTDNLHKDS GNPYADEVSR LYYASVGVFR RNRLFLTVCY RPFVSLEKAE RKRMKDSQKL KELDGALLEM LEIKSTLDTA LSRYGARPLG TFTEGSAVFS SQLAFYEYLL THQWRKVRVT RTPAYDVMGA AALFFSAESG QINHANGTQY FRGLEVKEFS EETATGMMDS LLYAPCDYVI TQSYTCMSRE EAKKAIKRTR RLLMSADDDA VSQRLDLDVA LDLLTSGKIA YGKHHFSIMV YSPSLENLVA DTNEISNALN NIGITPVPAE ISLSAAYMAQ LPGNYNLRPR KGELSSQNFV ELAALHNFYP GKRDKAPWGD AMALLRTPSG DGYYINLHNT LADKDEFNEK NPASTCILGT NGSGKTMLMT FFEIMQQKYG REDSFSPDAK TKRLTTVYLD KDRGAEMNIR ALGGRYYRVI SGESTGWNPF SLPATKRNIN FIKQLMKILC TRNGSTIFPR DERRLSDAVN AVMNDEPQYR VYGITRMLEN LPEPATKEAQ ENGLSIRLSQ WAQGGEFGWV FDNESDTFDI SNCDNFGIDG TEFLDDASVC APISFYLLYR ITSLLDGRRL VIFMDEFWKW LRDPVFKDFA YNKLKTIRKL NGMLVVGTQS PAEIIKDDIA PAVIEQCGTQ ILAANPNADR AHYVDDMKFE PEVFDVVKGL DPQARQYVVV KNQFKRGDTK RFAARVTLDL SGIGRYTKVM SGDAPNLEIF ESIYREGMQP HEWLDTYLAK AL // ID D7RTW7_KLEOX Unreviewed; 105 AA. AC D7RTW7; DT 10-AUG-2010, integrated into UniProtKB/TrEMBL. DT 10-AUG-2010, sequence version 1. DT 13-NOV-2013, entry version 4. DE SubName: Full=TraA; OS Klebsiella oxytoca KOX105. OG Plasmid pKOX105. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Klebsiella. OX NCBI_TaxID=795470; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=KOX105; PLASMID=pKOX105; RX PubMed=20656680; DOI=10.1093/jac/dkq269; RA Carattoli A., Aschbacher R., March A., Larcher C., Livermore D.M., RA Woodford N.; RT "Complete nucleotide sequence of the IncN plasmid pKOX105 encoding RT VIM-1, QnrS1 and SHV-12 proteins in Enterobacteriaceae from Bolzano, RT Italy compared with IncN plasmids encoding KPC enzymes in the USA."; RL J. Antimicrob. Chemother. 65:2070-2075(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HM126016; ADH29510.1; -; Genomic_DNA. DR RefSeq; YP_003675740.1; NC_014208.1. DR GeneID; 9284590; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 105 AA; 12264 MW; BD45A3DAAC64DAF5 CRC64; MFVDGKRPLF KGATRLPRAL GVPRNVAMMI FMISASLFMI IHMWAILVFV FLWIPSAALT KYDDRMFRIM GLWLKTKFSN WFDSPFKQWG GSSYSSVDYK RKGLK // ID D7ZAV8_ECOLX Unreviewed; 917 AA. AC D7ZAV8; DT 05-OCT-2010, integrated into UniProtKB/TrEMBL. DT 05-OCT-2010, sequence version 1. DT 16-APR-2014, entry version 6. DE SubName: Full=Type IV secretion/conjugal transfer ATPase, VirB4 family; GN ORFNames=HMPREF9534_01356; OS Escherichia coli MS 69-1. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=749531; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MS 69-1; RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., RA Courtney L., Fronick C., Harrison M., Strong C., Farmer C., RA Delahaunty K., Markovic C., Hall O., Minx P., Tomlinson C., RA Mitreva M., Hou S., Chen J., Wollam A., Pepin K.H., Johnson M., RA Bhonagiri V., Zhang X., Suruliraj S., Warren W., Chinwalla A., RA Mardis E.R., Wilson R.K.; RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADTP01000095; EFJ82575.1; -; Genomic_DNA. DR EnsemblBacteria; EFJ82575; EFJ82575; HMPREF9534_01356. DR PATRIC; 41807608; VBIEscCol149851_1291. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 917 AA; 105047 MW; 5F731364B043982B CRC64; MSTLFKGLTR PALIRGLGVP LYPFLGMCII CVLLGVWIHE AMYALILPGW YAIRRVTQFD ERFFDLLYLR TLVKGHPLSN KRFSAVHYAG SQYDEVDISK VDNFMKLKDQ SSVEELIPYS SHITDNIIVT KNRDLLATWQ IDGAYFECVD SEDLSILTDQ LNTLIRSFEG KSVTLYPHRI RCKKDVRPVF NSKIPFVNRV MNDYYESFPQ SEFFENKLFL TICFKPFTTE DKVTHFFSRS KKQKDIFKEP VNEMNEICDR LNTYLSRFHS RRLGLYEDHG VVYSDQLSLF QYLLSGRWQK VRVSSSPFYT YLGGKDLFFG NDAGQITASD HARYFRCIEI KDYFQETDAG ILDALMYLPV EYVVTSSFTA MDKQSAIKAL DDQIDKLEMT DDAAKSLLAD LKVGLDMVSS GYISFGKSHQ TLVVFADSPE RLVKDTNIVT STLEDLGLIV TYSTLSLGAA YFAQLPGNYT LRPRLSTLSS LNFAEMESFH NFFSGKEKGN TWGEKLITLR GSGNDIYHLN YHMTTEHQNF FGKNPTLGHT EILGTSNVGK TVLLMTKAFA AQQFGTPESF PANRKLKKLT TVFFDKDRAG EVGIRAMGGS YYRVKEGEPT GWNPAALPPT KRNIAFMKDL VRLLCTLNSE PLDDYQNSLI SDAVERLMQR SDRSYPISKL RPLIQEPDDT ETKRHGLKAR LKPWTQGEEF GWVFDNREDT FDVDNLDVFG IDGTEFLDNK VLASAASFYL IYRVTMLADG RRLLIYMDEF WQWINNEAFR DFVYNKLKTG RKLDMVLVVA TQSPDELIKS PIAAAVREQC ATHIYLANPK AKRSEYVDGL QVRELYFDKI KAIDPLSRQF LVVKNPQRKG ESDDFAAFAR LELGKAAYYL PVLSASKPQL ELFDEIWKEG MKPEEWLDTY LEQANLI // ID D7ZH79_ECOLX Unreviewed; 915 AA. AC D7ZH79; DT 05-OCT-2010, integrated into UniProtKB/TrEMBL. DT 05-OCT-2010, sequence version 1. DT 16-APR-2014, entry version 6. DE SubName: Full=Type IV secretion/conjugal transfer ATPase, VirB4 family; GN ORFNames=HMPREF9534_03624; OS Escherichia coli MS 69-1. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=749531; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MS 69-1; RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., RA Courtney L., Fronick C., Harrison M., Strong C., Farmer C., RA Delahaunty K., Markovic C., Hall O., Minx P., Tomlinson C., RA Mitreva M., Hou S., Chen J., Wollam A., Pepin K.H., Johnson M., RA Bhonagiri V., Zhang X., Suruliraj S., Warren W., Chinwalla A., RA Mardis E.R., Wilson R.K.; RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADTP01000252; EFJ80346.1; -; Genomic_DNA. DR EnsemblBacteria; EFJ80346; EFJ80346; HMPREF9534_03624. DR PATRIC; 41811956; VBIEscCol149851_3417. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 915 AA; 103839 MW; D90B7D0088E53A02 CRC64; MSTLYKAMTR PAMYVGVPVV PLTVVAGALF LAGVYISKLI WLAIPVAVFV LRMITKQDDH IFNLYFLKLK MLGNSVCNRF FGARAFLSGQ YEAVEIDEFV NAMKLNERIT TGKYIPYSSH VDKNIVKTKN GDYVATWQLM GINFESISAE MLETIDSQVA TLVRSFSGLP VSFYNHSCRA SFYDAFTTKS GNKYADIISD CYYGSMKKNK FKGNTLYFTL IYRPDGRVEK LEKRKKSIKE KKDDINIHVK RMNEMINTFS GALDKFTCKL LGMYEENGKV FSSQLSFYNY LLTGKLQKIR VTDSPVYNVL GGVDVFFNHD TGQICRIDGN KFFRSIEIKD FCSETASGVF DVLQYSDADY IITHSYTSMS KSEALSTIKR AEKQLKSTED DAVTQLQELE KAKNDIVSGD ISFGYYHFTL MVMADSIREL DESVSKITAD FTDLGIIPAL STMSLPAAYF AQLPAVFHLR PRLSPVSNVN FVELASFHNF YQGKRDKNCW TEAVAILKTP SKQAYYLNLH NSVLFKDETG EKNLANTKVI GTAGSGKTMF LSYLACSLQK YNNPETFADS AKNKKLTCVF LDKDRGAELC IRMLGGEYYT VKSGEPTGWN PFALEATKRN RIFVKQLMEI LCTRNGERLS TRERLLISES VDAVMDFPPG EMREYGITRM LEHLMQRDDR DEQENGIILR LSQWANGQAH GWVFDNAKDT FNIQHVNNFG IDGTEFLDDP MVCAPITFYL LYRITQLLDG RRLVIFLDEF WKWLQDEAFS DFVYNKLKTI RKLNGLVIPA TQSPDEILKN KISRAVVEVC STSIYLANPD ADYNDYVEGL KLTPEEFNIV KNLDPMSRQF LIKKSSLKKG DGKSFSALAT LDLSGLGGYL KILSASADNL EIFESIYHEG MEPDDWVPEY LERAI // ID D8A0S2_ECOLX Unreviewed; 238 AA. AC D8A0S2; DT 05-OCT-2010, integrated into UniProtKB/TrEMBL. DT 05-OCT-2010, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=HMPREF9530_00080; OS Escherichia coli MS 21-1. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=749527; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MS 21-1; RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., RA Courtney L., Fronick C., Harrison M., Strong C., Farmer C., RA Delahaunty K., Markovic C., Hall O., Minx P., Tomlinson C., RA Mitreva M., Hou S., Chen J., Wollam A., Pepin K.H., Johnson M., RA Bhonagiri V., Zhang X., Suruliraj S., Warren W., Chinwalla A., RA Mardis E.R., Wilson R.K.; RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADTR01000008; EFK23262.1; -; Genomic_DNA. DR EnsemblBacteria; EFK23262; EFK23262; HMPREF9530_00080. DR PATRIC; 41824931; VBIEscCol155740_0072. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 238 AA; 27127 MW; 1679CEF755665AA7 CRC64; MSTLYKAMTR PAMYVGVPVV PLTVVAGALF LAGVYISKLI WLAIPVAVFI LRMITKQDDH IFNLYFLKLK MLGNSVCNRF FGARAFLSGQ YEAVEIDEFV NAMKLNERIT TGKYIPYSSH VDKNIVKTKN GDYVATWQLM GINFESISVE MLETIDSQVA TLVRSFSGLP VSFYNHSCRA SFYDAFTTKS GNKYADIISD CYYGSMKKNK FKGNTLYFTL IYRPDGRVEK LEKRKKKY // ID D8AFU3_ECOLX Unreviewed; 107 AA. AC D8AFU3; DT 05-OCT-2010, integrated into UniProtKB/TrEMBL. DT 05-OCT-2010, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=HMPREF9530_05459; OS Escherichia coli MS 21-1. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=749527; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MS 21-1; RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., RA Courtney L., Fronick C., Harrison M., Strong C., Farmer C., RA Delahaunty K., Markovic C., Hall O., Minx P., Tomlinson C., RA Mitreva M., Hou S., Chen J., Wollam A., Pepin K.H., Johnson M., RA Bhonagiri V., Zhang X., Suruliraj S., Warren W., Chinwalla A., RA Mardis E.R., Wilson R.K.; RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADTR01000492; EFK18008.1; -; Genomic_DNA. DR EnsemblBacteria; EFK18008; EFK18008; HMPREF9530_05459. DR PATRIC; 41835401; VBIEscCol155740_5163. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 107 AA; 11825 MW; 092F86425BC7A408 CRC64; MDKEEIKAAE ELKAIFLTYN GLNRPAMING MPIIPFILCL LALMVSFFVG ILTIDFYGLI IPSIIIGVMI AIKQMCADDP NAMSARALKF KGLCLKGFRS NNVLKVE // ID D8AH23_ECOLX Unreviewed; 915 AA. AC D8AH23; DT 05-OCT-2010, integrated into UniProtKB/TrEMBL. DT 05-OCT-2010, sequence version 1. DT 16-APR-2014, entry version 6. DE SubName: Full=Type IV secretion/conjugal transfer ATPase, VirB4 family; GN ORFNames=HMPREF9541_00036; OS Escherichia coli MS 116-1. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=749538; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MS 116-1; RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., RA Courtney L., Fronick C., Harrison M., Strong C., Farmer C., RA Delahaunty K., Markovic C., Hall O., Minx P., Tomlinson C., RA Mitreva M., Hou S., Chen J., Wollam A., Pepin K.H., Johnson M., RA Bhonagiri V., Zhang X., Suruliraj S., Warren W., Chinwalla A., RA Mardis E.R., Wilson R.K.; RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADTZ01000007; EFK17541.1; -; Genomic_DNA. DR EnsemblBacteria; EFK17541; EFK17541; HMPREF9541_00036. DR PATRIC; 41846167; VBIEscCol149313_0032. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 915 AA; 103922 MW; 4184E5D3DBE3A606 CRC64; MSTLYKAMTR PAMYVGVPVV PLTVVAGALF LAGVYISKLI WLAIPVAVFI LRMITKQDDH IFNLYFLKLK MLGNSVCNRF FGARAFLSGQ YEAVEIDEFI NAMKLNERIT TGKYIPYSSH VDKNIVKTKN GDYVATWQLM GINFESISAE MLETIDSQVA TLVRSFSGLP VSFYNHSCRA SFYDAFTTKS GNKYADIISD CYYGSMKKNK FKGNTLYFTL IYRPDGRVEK LEKRKKSIKE KKDDINIHVK RMNEMINTFS GALDKFTCKL LGMYEENGKV FSSQLSFYNY LLTGKLQKIR VTDSPVYNVL GGVDVFFNHD TGQICRIDGN KFFRSIEIKD FCSETASGVF DVLQYSDADY IITHSYTSMS KSEALSTIKR AEKQLKSTED DAVTQLQELE KAKNDIVSGD ISFGYYHFTL MVMADSIREL DESVSKITAD FTDLGIIPAL STMSLPAAYF AQLPAVFHLR PRLSPVSNVN FVELASFHNF YQGKRDKNCW TEAVAILKTP SKQAYYLNLH NSVLFKDERG EKNLANTKVI GTAGSGKTMF LSYLACSLQK YNNPETFADS AKNKKLTCVF LDKDRGAELC IRMLGGEYYT VKSGEPTGWN PFALEATKRN RIFVKQLMEI LCTRNGERLS TRERLLISES VDAVMDFPPG EMREYGITRM LEHLMQRDDR DEQENGIILR LSQWANGQAH GWVFDNAKDT FNIQHVNNFG IDGTEFLDDP MVCAPITFYL LYRITQLLDG RRLVIFLDEF WKWLQDEAFS DFVYNKLKTI RKLNGLVIPA TQSPDEILKN KISRAVVEVC STSIYLANPD ADYNDYVEGL KLTPEEFNIV KNLDPMSRQF LIKKSSLKKG DGKSFSALAT LDLSGLGGYL KILSASADNL EIFESIYHEG MEPDDWVPEY LERAI // ID D8BAJ7_ECOLX Unreviewed; 917 AA. AC D8BAJ7; DT 05-OCT-2010, integrated into UniProtKB/TrEMBL. DT 05-OCT-2010, sequence version 1. DT 16-APR-2014, entry version 5. DE SubName: Full=Type IV secretion/conjugal transfer ATPase, VirB4 family; GN ORFNames=HMPREF9547_04965; OS Escherichia coli MS 175-1. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=749544; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MS 175-1; RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., RA Courtney L., Fronick C., Harrison M., Strong C., Farmer C., RA Delahaunty K., Markovic C., Hall O., Minx P., Tomlinson C., RA Mitreva M., Hou S., Chen J., Wollam A., Pepin K.H., Johnson M., RA Bhonagiri V., Zhang X., Suruliraj S., Warren W., Chinwalla A., RA Mardis E.R., Wilson R.K.; RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADUB01000413; EFJ63883.1; -; Genomic_DNA. DR EnsemblBacteria; EFJ63883; EFJ63883; HMPREF9547_04965. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 917 AA; 105005 MW; 1FC317CA03905E56 CRC64; MSTLFKGLTR PALIRGLGVP LYPFLGMCII CVLLGVWIHE AMYALILPGW YAIRRVTQFD ERFFDLLYLR TLVKGHPLSN KRFSAVHYAG SQYDEVDISK VDNFMKLKDQ SSVEELIPYS SHITDNIIVT KNRDLLATWQ IDGAYFECVD SEDLSILTDQ LNTLIRSFEG KSVTLYPHRI RCKKDVRPVF NSKIPFVNRV MNDYYESFPQ SEFFENKLFL TICFKPFTTE DKVTHFFSRS KKQKDIFKEP VNEMNEICDR LNTYLSRFHS RRLGLYEDHG GVYSDQLSLF QYLLSGRWQK VRVSSSPFYT YLGGKDLFFG NDAGQITASD HARYFRCIEI KDYFQETDAG ILDALMYLPV EYVVTSSFTA MDKQSAIKAL DDQIDKLEMT DDAAKSLLAD LKVGLDMVSS GYISFGKSHQ TLVVFADSPE RLVKDTNIVT STLEDLGLIV TYSTLSLGAA YFAQLPGNYT LRPRLSTLSS LNFAEMESFH NFFSGKEKGN TWGEKLITLR GSGNDIYHLN YHMTTEHQNF FGKNPTLGHT EILGTSNVGK TVLLMTKAFA AQQFGTPESF PANRKLKKLT TVFFDKDRAG EVGIRAMGGS YYRVKEGEPT GWNPAALPPT KRNIAFMKDL VRLLCTLNSE PLDDYQNSLI SDAVERLMQR SDRSYPISKL RPLIQEPDDT ETKRHGLKAR LKPWTQGEEF GWVFDNREDT FDVDNLDVFG IDGTEFLDNK VLASAASFYL IYRVTMLADG RRLLIYMDEF WQWINNEAFR DFVYNKLKTG RKLDMVLVVA TQSPDELIKS PIAAAVREQC ATHIYLANPK AKRSEYVDGL QVRELYFDKI KAIDPLSRQF LVVKNPQRKG ESDDFAAFAR LELGKAAYYL PVLSASKPQL ELFDEIWKEG MKPEEWLDTY LEQANLI // ID D8BTG7_ECOLX Unreviewed; 107 AA. AC D8BTG7; DT 05-OCT-2010, integrated into UniProtKB/TrEMBL. DT 05-OCT-2010, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=HMPREF9551_00915; OS Escherichia coli MS 196-1. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=749548; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MS 196-1; RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., RA Courtney L., Fronick C., Harrison M., Strong C., Farmer C., RA Delahaunty K., Markovic C., Hall O., Minx P., Tomlinson C., RA Mitreva M., Hou S., Chen J., Wollam A., Pepin K.H., Johnson M., RA Bhonagiri V., Zhang X., Suruliraj S., Warren W., Chinwalla A., RA Mardis E.R., Wilson R.K.; RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADUD01000115; EFI90051.1; -; Genomic_DNA. DR EnsemblBacteria; EFI90051; EFI90051; HMPREF9551_00915. DR PATRIC; 41875862; VBIEscCol147078_0857. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 107 AA; 11839 MW; 7F993644EBC7A05D CRC64; MDKEEIKAAE ELKAIFLTYN GLNRPAMIKG MPIIPFILCL LALMVSFFVG ILTIDFYGLI IPSIIIGVMI AIKQMCADDP NAMSARALKF KGLCLKGFRS NNVLKVE // ID D8L9W7_CAMFE Unreviewed; 964 AA. AC D8L9W7; DT 05-OCT-2010, integrated into UniProtKB/TrEMBL. DT 05-OCT-2010, sequence version 1. DT 16-APR-2014, entry version 5. DE SubName: Full=VirB4 protein; GN Name=VirB4; OS Campylobacter fetus subsp. fetus. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=32019; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=IMD 523; RA Abril C.C.E.; RL Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=IMD 523; RX PubMed=20479200; DOI=10.1128/AAC.00304-10; RA Abril C.E., Brodard I., Perreten V.; RT "Two novel antibiotic resistance genes, tet(44) and ant(6)-Ib, are RT located within a transferable pathogenicity island in Campylobacter RT fetus subsp. fetus."; RL Antimicrob. Agents Chemother. 54:3052-3055(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FN594949; CBH51801.1; -; Genomic_DNA. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR018222; Nuclear_transport_factor_2_euk. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR PROSITE; PS50177; NTF2_DOMAIN; 1. PE 4: Predicted; SQ SEQUENCE 964 AA; 111068 MW; 34808ABE74C1881D CRC64; MGWSNSKRSI AYSIGWHFNW WRTNDRWHIN VGQSAMLVSE PIYKALTRPP MVFGVPMVPF MMMVFGWALF AIFAKLLFGD AYLLLAVMII PSIFVFQMLV KKDDMAFRLW GLQLRFFRSP AINKFYNGRK SYMANSTYSK QSLRNKYPKL SVVGLSEFAN LENLIPYQTL IDNIVITKEG DYLASWRVDG IAFEVEDDEL IDMNKNKLNM LVRQFAGENV SFYFHNARIN TQVNQKGYFS NEFLKNFAKK YYEIFSADNL KENRLYLTAI YSPLSRAEKM SFKNQNIEAK KRQIRTHLKS FNQKCNVIEQ NLSHFKPYRL GVYDIEGVKF SSQLELYNYL IGGKFTKVRV PNAPLDFYLN GNLNEIFPSQ HTMQLNYNDG TRKFVKAIEL KDYPNVSFSG IFDSLMYANV EYTITQSFTP LSKKEARDEL TKQQKRLMAA EDDAISQISE LSSALDELQS DIIFGEYHFS IVIYADKQNE CERIANQIAV VLQDLGFLAT QANIALEATY FAQLPANFML RPRLHTISSK NYASFMALHN FPRGKQQGNP WGDAIAILQT PNGQPFFFNI HKTNFQKDEF GKNDVLANTF VLGQSGGGKT VLMNFTLNML CKYNELETFA DSTPKDKRKA TYFYLDKDKG ALGNIMTIGG KYVMITSGQP TGFNPFCCEA TPENIRRLKV LMKMLVTKGG QTHLMLTTRD EEQLNLAVDS VMRLEKSDRT HGVSRVWQLL QEGENETSSL KSRLMAWTIG NEFGWVFDNE TDTLDFSDEN ILVYGIDGTD LLSDDEISPY VAYYILWRII DMVDGRRFGL FIDEAWDWLK NPVVSKEVFN KEKTIRKENG FLFLGTQSVE DIAKSDIGTA IMEQSETILL LSNPKAKEDD YCRVLNMSEA EYQFVKTTIP EKYEFLIKKG VDYRAIAKIN LSHLGNMVRV LSTSKDYVDE LTKINAMNIG YDEKYQLVKE LYRF // ID D8MC08_9ENTR Unreviewed; 912 AA. AC D8MC08; DT 05-OCT-2010, integrated into UniProtKB/TrEMBL. DT 05-OCT-2010, sequence version 1. DT 16-APR-2014, entry version 5. DE SubName: Full=Pilx3-4/VirB3-4-like protein; GN ORFNames=pPAA3_0019; OS Photorhabdus asymbiotica. OG Plasmid pPAA3. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Photorhabdus. OX NCBI_TaxID=291112; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Kingscliff; PLASMID=pPAA3; RA Wilkinson P.A., Paszkiewicz K., Moorhouse A., Szubert J.M., RA Beatson S., Gerrard J., Waterfield N.R., ffrench-Constant R.H.; RT "New plasmids and putative virulence factors from the draft genome of RT an Australian clinical isolate of Photorhabdus asymbiotica."; RL FEMS Microbiol. Lett. 309:136-143(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FN691998; CBL47410.1; -; Genomic_DNA. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 912 AA; 103073 MW; 98B5A291DB1C73A3 CRC64; MAKLLKAMKR PAALWGVPMV PLLGVTGVTI ITAIWTSVAF LLLLPVEFLV MKSLTKKEPM RFNLIAVWLR AKGKPIANRL FGATTFMPVE HEDVDIKEFL DAMKLNQCAT VKKYIPYSSH IHENVVRSPK SDLYCTWELM GTPFDCEAEE ILEAGTNQLH WLFRSFEGMP VTFYIHNDRN QFSDSLHKNS GNPYADEVSG LYYSSLGNFR RNRLFLTVCY LPFAGLEKAE RKRMKDGQKL RELDGALREM LEIKGSLDSV LSRYGARPLG TFTEGEAVYS SQLAFYEYLL THEWRRVRVT RTPAYDVMGS AALFFSADSG QINHANGSHY FRGLEVKEFS EETATGMMDS LLYAPCDYVI TQTYTCMSRI EAQKAIKRTK RLLMSADDDA VSQRLDLDVA LDLLMSGKIA YGRHHFSLMV YSRSLDGLVA DTNEISNALN NIGITPVPAE LSLSAAYMAQ LPGNYNLRPR KGELSSQNFV ELAALHNFYP GKRDHAPWGD AMALMRTPSG DGYYLNLHNT LADKDEFNEK NPASTAILGT NGSGKTMLMA FLQINQQKYG RADSFSPDAK TKRLTTVYLD KDRGAEINIR ALGGRYYRVM SGEPTGWNPF SLAPTKRNLN FIKQLMKILC TRNGAKITTR DERRLSEAVN AVMKDEPQYR IYGITRLLEN LPEPATKEAQ ENGLSIRLSQ WAQGGEFGWV FDNESDTFNI SDCDNFGIDG TEFLDNADVC APITFYLLYR ITTLLDGRRL VIFMDEFWKW LRDPVFKDFA YNKLKTIRKL NGMLVVGTQS PAEIIKDDIA PAVIEQCGTQ ILAANPNGDR AHYVDGMKFE PEVFDVVKNL DPMARQYVVV KNQFRRGDTK RFAARVTLDL SGVGKYTKVM SGSSDNLEIF DSLYREGMQP HDWLDTYLAK AL // ID D8N3I3_RALSL Unreviewed; 100 AA. AC D8N3I3; DT 05-OCT-2010, integrated into UniProtKB/TrEMBL. DT 05-OCT-2010, sequence version 1. DT 22-JAN-2014, entry version 7. DE SubName: Full=Type IV secretory pathway, VirB3 protein; GN Name=virB3; ORFNames=CMR15_p0039; OS Ralstonia solanacearum CMR15. OG Plasmid pRSC35. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Ralstonia. OX NCBI_TaxID=859655; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=CMR15; PLASMID=pRSC35; RA Remenant B., Coupat-Goutaland B., Guidot A., Cellier G., Wicker E., RA Allen C., Fegan M., Pruvost O., Elbaz M., Calteau A., Salvignol G., RA Mornico D., Mangenot S., Barbe V., Medigue C., Prior P.; RT "Genomes of three tomato pathogens within the Ralstonia solanacearum RT species complex reveal significant evolutionary divergence."; RL BMC Genomics 11:379-379(2010). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=CMR15; PLASMID=pRSC35; RA Genoscope - CEA; RL Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FP885893; CBJ36151.1; -; Genomic_DNA. DR RefSeq; YP_005995024.1; NC_017558.1. DR GeneID; 13915211; -. DR KEGG; rsm:CMR15_p0039; -. DR KO; K03198; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 100 AA; 11062 MW; 7DD10629BB37E785 CRC64; MSADEQFHDD EGESLVAAMT RPTMVGGLTL ASLAMSFYFP GMAAMIARSV WPAIAIPFLL LGSYLVCLKD VYLFDILAAA THLKVCPNNR FWGCRRYAPR // ID D9Y844_9BURK Unreviewed; 108 AA. AC D9Y844; DT 05-OCT-2010, integrated into UniProtKB/TrEMBL. DT 05-OCT-2010, sequence version 1. DT 18-SEP-2013, entry version 5. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=HMPREF0189_01958; OS Burkholderiales bacterium 1_1_47. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales. OX NCBI_TaxID=469610; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=1_1_47; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Earl A., Feldgarden M., Gevers D., Young S.K., Zeng Q., RA Koehrsen M., Alvarado L., Berlin A., Bochicchio J., Borenstein D., RA Chapman S.B., Chen Z., Engels R., Freedman E., Gellesch M., RA Goldberg J., Griggs A., Gujja S., Heilman E., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Mehta T., Park D., Pearson M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA Thomson T., Walk T., White J., Yandava C., Strauss J., Daigneault M., RA McDonald J., Ambrose C.E., Allen-Vercoe E., Haas B., Nusbaum C., RA Birren B.; RT "The Genome Sequence of Burkholderiales bacterium strain 1_1_47."; RL Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL384001; EFL82238.1; -; Genomic_DNA. DR EnsemblBacteria; EFL82238; EFL82238; HMPREF0189_01958. DR PATRIC; 40954854; VBIBurBac67366_2063. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 108 AA; 12351 MW; F32072C6CC1EF8EA CRC64; METSSPLFKG ATRPACIGGV PLQVFVLNIG VISLLAIWIW IPLILITPIT HFYLKTVADK DEQIFSQLIS YARINLVRSF NRRYWGNVTS LSPKQEKKEL FILEKSKE // ID D9YGK5_9DELT Unreviewed; 100 AA. AC D9YGK5; DT 05-OCT-2010, integrated into UniProtKB/TrEMBL. DT 05-OCT-2010, sequence version 1. DT 13-NOV-2013, entry version 5. DE SubName: Full=Uncharacterized protein; GN ORFNames=HMPREF0326_02631; OS Desulfovibrio sp. 3_1_syn3. OC Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; OC Desulfovibrionaceae; Desulfovibrio. OX NCBI_TaxID=457398; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=3_1_syn3; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Earl A., Feldgarden M., Gevers D., Young S.K., Zeng Q., RA Koehrsen M., Alvarado L., Berlin A., Bochicchio J., Borenstein D., RA Chapman S.B., Chen Z., Engels R., Freedman E., Gellesch M., RA Goldberg J., Griggs A., Gujja S., Heilman E., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Mehta T., Park D., Pearson M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA Thomson T., Walk T., White J., Yandava C., Strauss J., Daigneault M., RA McDonald J., Ambrose C.E., Allen-Vercoe E., Haas B., Nusbaum C., RA Birren B.; RL Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=3_1_syn3; RG The Broad Institute Genomics Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Strauss J., Daigneault M., RA McDonald J., Ambrose C.E., Allen-Vercoe E., Walker B., Young S., RA Zeng Q., Gargeya S., Fitzgerald M., Haas B., Abouelleil A., RA Allen A.W., Alvarado L., Arachchi H.M., Berlin A.M., Chapman S.B., RA Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M., RA Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., RA Murphy C., Pearson M., Poon T.W., Priest M., Roberts A., Saif S., RA Shea T., Sisk P., Sykes S., Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Desulfovibrio sp. 3_1_syn3."; RL Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADDR02000002; EFL84769.1; -; Genomic_DNA. DR EnsemblBacteria; EFL84769; EFL84769; HMPREF0326_02631. DR PATRIC; 40960957; VBIDesSp67086_2756. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 100 AA; 11263 MW; 21A4B1CD00ABDC85 CRC64; METRSIPVHQ ALHRPNLVLG AERELAMSSV LIALLVGVGG LTLISAVTAF SFWLVSIFVL RRMAKADPLM SKVWRRHVKQ QDFYSAKASR WRALEGFKAK // ID D9Z5N9_ECOLX Unreviewed; 114 AA. AC D9Z5N9; DT 05-OCT-2010, integrated into UniProtKB/TrEMBL. DT 05-OCT-2010, sequence version 1. DT 13-NOV-2013, entry version 4. DE SubName: Full=TraA; GN Name=traA; OS Escherichia coli. OG Plasmid pEC_L46. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=562; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=L46; PLASMID=pEC_L46; RX PubMed=20585456; DOI=10.1371/journal.pone.0011202; RA Smet A., Van Nieuwerburgh F., Vandekerckhove T.T., Martel A., RA Deforce D., Butaye P., Haesebrouck F.; RT "Complete nucleotide sequence of CTX-M-15-plasmids from clinical RT Escherichia coli isolates: insertional events of transposons and RT insertion sequences."; RL PLoS ONE 5:E11202-E11202(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GU371929; ADL14189.1; -; Genomic_DNA. DR RefSeq; YP_003829295.1; NC_014385.1. DR GeneID; 9538231; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 114 AA; 13293 MW; E6B5F9478CDFEF90 CRC64; MSPKVRTTKM FVDGKRPLFK GATRLPRALG VPRNVAMMIF MISASLFMII HMWAILVFVF LWIPSAALTK YDDRMFRIMG LWLKTKFSNW FDSPFKQWGG SSYSSVDYKR KGLK // ID E0DPL5_9RHIZ Unreviewed; 116 AA. AC E0DPL5; DT 02-NOV-2010, integrated into UniProtKB/TrEMBL. DT 02-NOV-2010, sequence version 1. DT 03-APR-2013, entry version 5. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=BIBO1_1996; OS Brucella inopinata BO1. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=470735; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=BO1; RA Setubal J.C., Boyle S., Crasta O.R., Kenyon R.W., Mane S., Shukla M., RA Snyder E.E., Sobral B.W., Wattam A.R., Will R., Williams K., Yoo H., RA Frace M.A., Sammons S.A., Hoffmaster A.R., Tiller R.V., RA Olsen-Rasmussen M., De B.K.; RL Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADEZ01000027; EFM56040.1; -; Genomic_DNA. DR EnsemblBacteria; EFM56040; EFM56040; BIBO1_1996. DR PATRIC; 41368124; VBIBruSp109945_2105. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC7423934E0B CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TKTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID E0DYI9_9RHIZ Unreviewed; 116 AA. AC E0DYI9; DT 02-NOV-2010, integrated into UniProtKB/TrEMBL. DT 02-NOV-2010, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=BROD_2221; OS Brucella sp. NF 2653. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=693748; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NF 2653; RA Setubal J.C., Boyle S., Crasta O.R., Kenyon R.W., Mane S., Shukla M., RA Snyder E.E., Sobral B.W., Wattam A.R., Will R., Williams K., Yoo H., RA Frace M.A., Sammons S.A., Hoffmaster A.R., Tiller R.V., RA Olsen-Rasmussen M., De B.K.; RL Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADFB01000075; EFM61876.1; -; Genomic_DNA. DR EnsemblBacteria; EFM61876; EFM61876; BROD_2221. DR PATRIC; 41382713; VBIBruSp153798_2345. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13068 MW; 1FA20F7423934E0B CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TKTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPVAFT KRKRES // ID E0QB51_CAMCO Unreviewed; 95 AA. AC E0QB51; DT 02-NOV-2010, integrated into UniProtKB/TrEMBL. DT 02-NOV-2010, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Conjugal transfer protein TrbD; GN Name=trbD; ORFNames=HMPREF9399_0022; OS Campylobacter coli JV20. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=864566; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=JV20; RA Muzny D., Qin X., Deng J., Jiang H., Liu Y., Qu J., Song X.-Z., RA Zhang L., Thornton R., Coyle M., Francisco L., Jackson L., Javaid M., RA Korchina V., Kovar C., Mata R., Mathew T., Ngo R., Nguyen L., RA Nguyen N., Okwuonu G., Ongeri F., Pham C., Simmons D., RA Wilczek-Boney K., Hale W., Jakkamsetti A., Pham P., Ruth R., RA San Lucas F., Warren J., Zhang J., Zhao Z., Zhou C., Zhu D., Lee S., RA Bess C., Blankenburg K., Forbes L., Fu Q., Gubbala S., Hirani K., RA Jayaseelan J.C., Lara F., Munidasa M., Palculict T., Patil S., RA Pu L.-L., Saada N., Tang L., Weissenberger G., Zhu Y., Hemphill L., RA Shang Y., Youmans B., Ayvaz T., Ross M., Santibanez J., Aqrawi P., RA Gross S., Joshi V., Fowler G., Nazareth L., Reid J., Worley K., RA Petrosino J., Highlander S., Gibbs R.; RL Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEER01000005; EFM38098.1; -; Genomic_DNA. DR EnsemblBacteria; EFM38098; EFM38098; HMPREF9399_0022. DR PATRIC; 43467072; VBICamCol168266_1750. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 95 AA; 11054 MW; F0C02E71D53347AB CRC64; MEELQRIDIY SALNKPNLIF GADRELILMV GVISFALIFT GATLLTSIIG IFLFFFCNML LRLMAKSDPL MRQIFLRQIK YKKFYYAQST PFSKD // ID E0R7H7_ECOLX Unreviewed; 915 AA. AC E0R7H7; DT 02-NOV-2010, integrated into UniProtKB/TrEMBL. DT 02-NOV-2010, sequence version 1. DT 16-APR-2014, entry version 7. DE SubName: Full=Putative conjugal transfer protein TriC; GN ORFNames=ECNC101_23887; OS Escherichia coli NC101. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=753642; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NC101; RA Suzuki H., Richards V., Lefebure T., Pavinski Bitar P., Lang P., RA Stanhope M.; RL Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEFA01000027; EFM50374.1; -; Genomic_DNA. DR EnsemblBacteria; EFM50374; EFM50374; ECNC101_23887. DR PATRIC; 41696709; VBIEscCol150923_5098. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 915 AA; 103922 MW; 4184E5D3DBE3A606 CRC64; MSTLYKAMTR PAMYVGVPVV PLTVVAGALF LAGVYISKLI WLAIPVAVFI LRMITKQDDH IFNLYFLKLK MLGNSVCNRF FGARAFLSGQ YEAVEIDEFI NAMKLNERIT TGKYIPYSSH VDKNIVKTKN GDYVATWQLM GINFESISAE MLETIDSQVA TLVRSFSGLP VSFYNHSCRA SFYDAFTTKS GNKYADIISD CYYGSMKKNK FKGNTLYFTL IYRPDGRVEK LEKRKKSIKE KKDDINIHVK RMNEMINTFS GALDKFTCKL LGMYEENGKV FSSQLSFYNY LLTGKLQKIR VTDSPVYNVL GGVDVFFNHD TGQICRIDGN KFFRSIEIKD FCSETASGVF DVLQYSDADY IITHSYTSMS KSEALSTIKR AEKQLKSTED DAVTQLQELE KAKNDIVSGD ISFGYYHFTL MVMADSIREL DESVSKITAD FTDLGIIPAL STMSLPAAYF AQLPAVFHLR PRLSPVSNVN FVELASFHNF YQGKRDKNCW TEAVAILKTP SKQAYYLNLH NSVLFKDERG EKNLANTKVI GTAGSGKTMF LSYLACSLQK YNNPETFADS AKNKKLTCVF LDKDRGAELC IRMLGGEYYT VKSGEPTGWN PFALEATKRN RIFVKQLMEI LCTRNGERLS TRERLLISES VDAVMDFPPG EMREYGITRM LEHLMQRDDR DEQENGIILR LSQWANGQAH GWVFDNAKDT FNIQHVNNFG IDGTEFLDDP MVCAPITFYL LYRITQLLDG RRLVIFLDEF WKWLQDEAFS DFVYNKLKTI RKLNGLVIPA TQSPDEILKN KISRAVVEVC STSIYLANPD ADYNDYVEGL KLTPEEFNIV KNLDPMSRQF LIKKSSLKKG DGKSFSALAT LDLSGLGGYL KILSASADNL EIFESIYHEG MEPDDWVPEY LERAI // ID E0SAI7_DICD3 Unreviewed; 90 AA. AC E0SAI7; DT 02-NOV-2010, integrated into UniProtKB/TrEMBL. DT 02-NOV-2010, sequence version 1. DT 14-MAY-2014, entry version 20. DE SubName: Full=Conjugative transfer protein TrbD; GN OrderedLocusNames=Dda3937_01740; OS Dickeya dadantii (strain 3937) (Erwinia chrysanthemi (strain 3937)). OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Dickeya. OX NCBI_TaxID=198628; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=3937; RX PubMed=21217001; DOI=10.1128/JB.01513-10; RA Glasner J.D., Yang C.H., Reverchon S., Hugouvieux-Cotte-Pattat N., RA Condemine G., Bohin J.P., Van Gijsegem F., Yang S., Franza T., RA Expert D., Plunkett G.III., San Francisco M.J., Charkowski A.O., RA Py B., Bell K., Rauscher L., Rodriguez-Palenzuela P., Toussaint A., RA Holeva M.C., He S.Y., Douet V., Boccara M., Blanco C., Toth I., RA Anderson B.D., Biehl B.S., Mau B., Flynn S.M., Barras F., RA Lindeberg M., Birch P.R., Tsuyumu S., Shi X., Hibbing M., Yap M.N., RA Carpentier M., Dassa E., Umehara M., Kim J.F., Rusch M., Soni P., RA Mayhew G.F., Fouts D.E., Gill S.R., Blattner F.R., Keen N.T., RA Perna N.T.; RT "Genome sequence of the plant-pathogenic bacterium Dickeya dadantii RT 3937."; RL J. Bacteriol. 193:2076-2077(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002038; ADM97045.1; -; Genomic_DNA. DR RefSeq; YP_003881602.1; NC_014500.1. DR EnsemblBacteria; ADM97045; ADM97045; Dda3937_01740. DR GeneID; 9732246; -. DR KEGG; ddd:Dda3937_01740; -. DR PATRIC; 42314023; VBIDicDad25310_0843. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; PGLVLWI; -. DR BioCyc; DDAD198628:GHFQ-861-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 90 AA; 9736 MW; 59311986CE027D3D CRC64; MSDDYTLLPG FDVPLHRSLT EPILLGGAPR TVAIANGTLA AAVGLGLQLW LPGLVLWVVG HTLAVWGARE DPQFMTVFSR HIRHPSLLDV // ID E0SJI1_DICD3 Unreviewed; 926 AA. AC E0SJI1; DT 02-NOV-2010, integrated into UniProtKB/TrEMBL. DT 02-NOV-2010, sequence version 1. DT 14-MAY-2014, entry version 19. DE SubName: Full=ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4); GN Name=virB4; OrderedLocusNames=Dda3937_02753; OS Dickeya dadantii (strain 3937) (Erwinia chrysanthemi (strain 3937)). OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Dickeya. OX NCBI_TaxID=198628; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=3937; RX PubMed=21217001; DOI=10.1128/JB.01513-10; RA Glasner J.D., Yang C.H., Reverchon S., Hugouvieux-Cotte-Pattat N., RA Condemine G., Bohin J.P., Van Gijsegem F., Yang S., Franza T., RA Expert D., Plunkett G.III., San Francisco M.J., Charkowski A.O., RA Py B., Bell K., Rauscher L., Rodriguez-Palenzuela P., Toussaint A., RA Holeva M.C., He S.Y., Douet V., Boccara M., Blanco C., Toth I., RA Anderson B.D., Biehl B.S., Mau B., Flynn S.M., Barras F., RA Lindeberg M., Birch P.R., Tsuyumu S., Shi X., Hibbing M., Yap M.N., RA Carpentier M., Dassa E., Umehara M., Kim J.F., Rusch M., Soni P., RA Mayhew G.F., Fouts D.E., Gill S.R., Blattner F.R., Keen N.T., RA Perna N.T.; RT "Genome sequence of the plant-pathogenic bacterium Dickeya dadantii RT 3937."; RL J. Bacteriol. 193:2076-2077(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002038; ADM99155.1; -; Genomic_DNA. DR RefSeq; YP_003883712.1; NC_014500.1. DR EnsemblBacteria; ADM99155; ADM99155; Dda3937_02753. DR GeneID; 9734402; -. DR KEGG; ddd:Dda3937_02753; -. DR PATRIC; 42318237; VBIDicDad25310_2934. DR HOGENOM; HOG000119263; -. DR KO; K03199; -. DR OMA; RYFRIRT; -. DR BioCyc; DDAD198628:GHFQ-3017-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 926 AA; 104467 MW; 68600BF1D846BC0E CRC64; MARTGHPRGK PMTTLNKALT RPAAIMGIPL VPFVLVSGAI LLLSVYTRYY LALLLIPAWL EMRAKARADI HYFGLLWLAF KTRGRFATNR YFGATAMLAS QYDAVDISEF TDKMKLNARI TLDKYIPYSS HLHPHVIRNR HGDFVASWEL GGTVFECEDE HHLTLMASHL NNLIRSYEGL PVTFYIHRIR ETYQDAFEAT SGIPFSDEVA ARYYRALNAK PLWRHRLFFT VCYAPFSALE KKTMKTQPAG KRKAALDEAL KVMLEHHAAL GSALSRYMAT PLGTYEEKGR VYSSQLAFYH RLITGQWQSV AVTRSPFYLT LSTPDVFFTT DTAECQTVGG SRFFRSLEIK DYSPETATGL LDALLYAKSE YVLTQSFTCM ARDEAQNHIR LAEKRLNATD DDALSQREEL VVLRDLLQSG HVSCGKYHFS LLVSSASAEQ VVRETHALAQ PFTDLGIMTS LSTLSLPAAY LAQLPGMYPF RPRLVVVSSQ NYADLGSLHN FHPHKRSGNP WGDAIAILTS PGGGGYYLNL HDSQVGRDDF NEKTPGNTAI IGKTGSGKTL LMTMMQHLMQ KYRHPATFSA AAPGKRLTTV YFDKDRAAEM SIRQMGGRYF RIRTGTPAGF NPFSLTPTRR NISFIKQLVR MLCRRNGKPL DPRDEARISA AVDTLMLDYP PELRRYGITR LLEVLPEPPT REARTNGLRI RLKQWAQGGE FGWIFDNAED SFNIGESDNI GIDGTEFLDD DDIRGPITFY LLFRVTSLLD GRRLVMFMDE FWKWLADVEF SKFSLNMLKV IRKLNGIFIP ATQSPDEIVR HPIAPAIIEQ CSTQIFLANP KASRADYVEK MNVPDSVYDT VRRLDPGEHY MVIVKTPLRA GETRPFVALA RMDLSGIGNL TTILSGSEDN LKRFDALYQE GMSPQDWKAA FLEQAI // ID E0TDN9_PARBH Unreviewed; 83 AA. AC E0TDN9; DT 02-NOV-2010, integrated into UniProtKB/TrEMBL. DT 02-NOV-2010, sequence version 1. DT 14-MAY-2014, entry version 18. DE SubName: Full=Putative conjugal transfer trbd transmembrane protein; GN OrderedLocusNames=PB2503_03597; OS Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC OS 12087). OC Bacteria; Proteobacteria; Alphaproteobacteria; Parvularculales; OC Parvularculaceae; Parvularcula. OX NCBI_TaxID=314260; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-594 / HTCC2503 / KCTC 12087; RA Kang D.-M., Oh H.-M., Cho J.-C.; RT "Genome sequence of Parvularcula bermudensis HTCC2503."; RL Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002156; ADM08794.1; -; Genomic_DNA. DR RefSeq; YP_003853936.1; NC_014414.1. DR EnsemblBacteria; ADM08794; ADM08794; PB2503_03597. DR GeneID; 9708960; -. DR KEGG; pbr:PB2503_03597; -. DR PATRIC; 42425373; VBIParBer119301_0632. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; ALTEHIM; -. DR BioCyc; PBER314260:GI0G-627-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 83 AA; 8998 MW; 1ABC2CC7E2A30762 CRC64; MTEGFAIPVH RSLTEPILMG GAPRNAAILN GTIAAALGLG LQVWGTGILY WIIAHGACVF MAKRDPKFMD VVLRHIRHEG YLA // ID E0TFJ6_PARBH Unreviewed; 84 AA. AC E0TFJ6; DT 02-NOV-2010, integrated into UniProtKB/TrEMBL. DT 02-NOV-2010, sequence version 1. DT 14-MAY-2014, entry version 18. DE SubName: Full=Putative conjugal transfer trbd transmembrane protein; GN OrderedLocusNames=PB2503_12589; OS Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC OS 12087). OC Bacteria; Proteobacteria; Alphaproteobacteria; Parvularculales; OC Parvularculaceae; Parvularcula. OX NCBI_TaxID=314260; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-594 / HTCC2503 / KCTC 12087; RA Kang D.-M., Oh H.-M., Cho J.-C.; RT "Genome sequence of Parvularcula bermudensis HTCC2503."; RL Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002156; ADM10556.1; -; Genomic_DNA. DR RefSeq; YP_003855698.1; NC_014414.1. DR EnsemblBacteria; ADM10556; ADM10556; PB2503_12589. DR GeneID; 9710723; -. DR KEGG; pbr:PB2503_12589; -. DR PATRIC; 42429092; VBIParBer119301_2470. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; WIPGLVV; -. DR BioCyc; PBER314260:GI0G-2418-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 84 AA; 8892 MW; D6AFBD49537C4AAE CRC64; MLDGYEIPLH RSLAEPILMA GAPRSAAIAI GTIAAALALG LRLWIPGLVV WVAGHSLAVL MARSDPDFLA VAIRSARHKE HLSC // ID E0TGX3_PARBH Unreviewed; 84 AA. AC E0TGX3; DT 02-NOV-2010, integrated into UniProtKB/TrEMBL. DT 02-NOV-2010, sequence version 1. DT 14-MAY-2014, entry version 18. DE SubName: Full=Putative conjugal transfer trbd transmembrane protein; GN OrderedLocusNames=PB2503_05707; OS Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC OS 12087). OC Bacteria; Proteobacteria; Alphaproteobacteria; Parvularculales; OC Parvularculaceae; Parvularcula. OX NCBI_TaxID=314260; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-594 / HTCC2503 / KCTC 12087; RA Kang D.-M., Oh H.-M., Cho J.-C.; RT "Genome sequence of Parvularcula bermudensis HTCC2503."; RL Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002156; ADM09213.1; -; Genomic_DNA. DR RefSeq; YP_003854355.1; NC_014414.1. DR EnsemblBacteria; ADM09213; ADM09213; PB2503_05707. DR GeneID; 9709378; -. DR KEGG; pbr:PB2503_05707; -. DR PATRIC; 42426251; VBIParBer119301_1066. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; VFMARSD; -. DR BioCyc; PBER314260:GI0G-1051-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 84 AA; 8909 MW; 624FD1AFA68A45B5 CRC64; MAEGYEIPLH RSLTEPILMG GAPRTAAIAI GTLAAAVGLG LQLWIPGLVL WAVGHSAAVF MARSDPDFMA VASRSMRHKE HLTC // ID E1HJP6_ECOLX Unreviewed; 106 AA. AC E1HJP6; DT 30-NOV-2010, integrated into UniProtKB/TrEMBL. DT 30-NOV-2010, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=HMPREF9543_01266; OS Escherichia coli MS 146-1. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=749540; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MS 146-1; RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., RA Courtney L., Fronick C., Harrison M., Strong C., Farmer C., RA Delahaunty K., Markovic C., Hall O., Minx P., Tomlinson C., RA Mitreva M., Hou S., Chen J., Wollam A., Pepin K.H., Johnson M., RA Bhonagiri V., Zhang X., Suruliraj S., Warren W., Chinwalla A., RA Mardis E.R., Wilson R.K.; RL Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADTN01000077; EFK91844.1; -; Genomic_DNA. DR EnsemblBacteria; EFK91844; EFK91844; HMPREF9543_01266. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 106 AA; 11897 MW; 6BEA97B0EC71DFC8 CRC64; MDKVNEHVSE SFMTYNGFNR PALVAGIPLM LLLFTAFFAV LTGFPAIFLW GIKGIIIPVI CALFLFIVKL ACENDSNALR VIRLNLMGLL LKIRHRDLII GYSSVR // ID E1IXL5_ECOLX Unreviewed; 917 AA. AC E1IXL5; DT 30-NOV-2010, integrated into UniProtKB/TrEMBL. DT 30-NOV-2010, sequence version 1. DT 16-APR-2014, entry version 7. DE SubName: Full=Type IV secretion/conjugal transfer ATPase, VirB4 family; GN ORFNames=HMPREF9348_04972; OS Escherichia coli MS 145-7. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=679204; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MS 145-7; RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., RA Courtney L., Fronick C., Harrison M., Strong C., Farmer C., RA Delahaunty K., Markovic C., Hall O., Minx P., Tomlinson C., RA Mitreva M., Hou S., Chen J., Wollam A., Pepin K.H., Johnson M., RA Bhonagiri V., Zhang X., Suruliraj S., Warren W., Chinwalla A., RA Mardis E.R., Wilson R.K.; RL Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADWS01000044; EFO55912.1; -; Genomic_DNA. DR EnsemblBacteria; EFO55912; EFO55912; HMPREF9348_04972. DR PATRIC; 42101901; VBIEscCol143813_4783. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 917 AA; 104823 MW; 0DFE56B735ABBE28 CRC64; MSTVFKGLTR PALIRGLGVP LYPFLGMCVI CVLLGVWIHE AMYALILPGW YAIKRVTKID ERFFDLLYLR MQIKGNPLAN KRFNAVHYAG SSYDAVDISK VDNFMKLKDQ SSLEELIPYS SHITDNLIVT RNHDLLATWQ IDGAYFECVD EADLALLTDQ LNTLIRSFDG KPVTFYTHRI RVRKEVRPVF DSKIPFVNRV MNDYYESLSA AEYFENKLYL TVCYKPFSAE DKVTHFLSRK KGNKNIFEEP INDMNEICGR LSTYLSRFHS RRLGLYEENN IVYSEQLTLF QKLLSGRWQK VRVTNSPFYT YLGGKDLFFG NDAGQITASD HARYFRCIEI KDYFQETDAG IFDALMYLPV EYVQTSSFTP IDKQSAIKAL DDQIDKLEMT DDAAKSLLAD LKVGLDMVSS GYISFGKSHQ TLIVYADSPE RLVKDTNIVT TTLEDLGLIV TYSTLSLGAA YFAQLPGNYT LRPRLSSISS LNFAEMESFH NFFTGKEKGN TWGNNLITLG GSGNDIYNLN YHMTTEHQNY FGKNPTLGHT EILGTSNVGK TVVMMTKAFA AQQFGTPESF PPERKLKKLT TVFFDKDRAA EPGIRSMGGA YFRVKEGEPT GWNPAALPPT KRNISFMKDL VRLLCTLNSE PLDDYQNRLI SDAVERLMQR SNRSYPISKL RPLILEPDDT ETRRHGLKAR LNAWVQGGEF GWVFDNPDDT FDVDNLDVFG IDGTEFLDNK VLSSAASFYL IYRVTMLADG RRLLIYMDEF WQWINNEAFR DFVYNKLKTA RKLDMVLVVA TQSPDELIKS PIAAAVREQC ATHIYLANPK AKRSEYVDEL EVRELYFDKI KAIDPLSRQF LVVKNPQRKG ESDDFAAFAR LDLGKAAYYL PVLSASKPQL ELFDEIWKEG MKPEEWLDTY LERANLI // ID E2CS68_9RHOB Unreviewed; 99 AA. AC E2CS68; DT 30-NOV-2010, integrated into UniProtKB/TrEMBL. DT 30-NOV-2010, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN ORFNames=TRICHSKD4_6013; OS Roseibium sp. TrichSKD4. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Roseibium. OX NCBI_TaxID=744980; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=TrichSKD4; RA Mann E., Barbeau K., Ferriera S., Johnson J., Kravitz S., Beeson K., RA Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.; RL Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL476321; EFO28640.1; -; Genomic_DNA. DR EnsemblBacteria; EFO28640; EFO28640; TRICHSKD4_6013. DR PATRIC; 41708350; VBIRosSp158592_5803. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 99 AA; 10804 MW; 511D2617D5B679BE CRC64; MNEFQDETPT VTPLVIGLTR SPTLWGVPYM AVILIIGATI IGWLATNHLA ALLVAPAAYL FLFSLCAWDS KILDVLQVAS RKTPGTPNKR FWGTNSYGP // ID E2EAN8_KLEPN Unreviewed; 103 AA. AC E2EAN8; DT 30-NOV-2010, integrated into UniProtKB/TrEMBL. DT 30-NOV-2010, sequence version 1. DT 13-NOV-2013, entry version 4. DE SubName: Full=TraA; GN Name=traA; OS Klebsiella pneumoniae. OG Plasmid pNL194. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Klebsiella. OX NCBI_TaxID=573; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NL194; PLASMID=pNL194; RX PubMed=20660690; DOI=10.1128/AAC.00665-10; RA Miriagou V., Papagiannitsis C.C., Kotsakis S.D., Loli A., Tzelepi E., RA Legakis N.J., Tzouvelekis L.S.; RT "Sequence of pNL194, a 79.3-kilobase IncN plasmid carrying the blaVIM- RT 1 metallo-beta-lactamase gene in Klebsiella pneumoniae."; RL Antimicrob. Agents Chemother. 54:4497-4502(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GU585907; ADG84798.1; -; Genomic_DNA. DR RefSeq; YP_003813022.1; NC_014368.1. DR PRIDE; E2EAN8; -. DR GeneID; 9487096; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11752 MW; 39143B0981BEFFB6 CRC64; MFVDGKRPLF KGATRLPRAL GVPRNVAMMI FMISASLFMI IHMWAILVFV FLRIPSAALT KYDDRMFRIM GLWLKTNSVI GLILRLSSGE DRLIPLLTTN VRV // ID E2PLK6_9RHIZ Unreviewed; 116 AA. AC E2PLK6; DT 30-NOV-2010, integrated into UniProtKB/TrEMBL. DT 30-NOV-2010, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=BIBO2_0935; OS Brucella sp. BO2. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=693750; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=BO2; RA Setubal J.C., Boyle S., Crasta O.R., Kenyon R.W., Mane S., Shukla M., RA Snyder E.E., Sobral B.W., Wattam A.R., Will R., Williams K., Yoo H., RA Frace M.A., Sammons S.A., Hoffmaster A.R., Tiller R.V., RA Olsen-Rasmussen M., De B.K.; RL Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADFA01000061; EFM60098.1; -; Genomic_DNA. DR EnsemblBacteria; EFM60098; EFM60098; BIBO2_0935. DR PATRIC; 41372990; VBIBruSp146994_1039. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC7423934E0B CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TKTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID E2T5B1_9RALS Unreviewed; 118 AA. AC E2T5B1; DT 11-JAN-2011, integrated into UniProtKB/TrEMBL. DT 11-JAN-2011, sequence version 1. DT 18-SEP-2013, entry version 5. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=HMPREF1004_04590; OS Ralstonia sp. 5_7_47FAA. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Ralstonia. OX NCBI_TaxID=658664; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=5_7_47FAA; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Earl A., Feldgarden M., Young S.K., Pearson M., Zeng Q., RA Alvarado L., Berlin A., Bochicchio J., Chapman S.B., Chen Z., RA Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., RA Heilman E., Heiman D., Howarth C., Jen D., Larson L., Mehta T., RA Neiman D., Park D., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Thomson T., Walk T., White J., Yandava C., RA Allen-Vercoe E., Strauss J., Daigneault M., Haas B., Nusbaum C., RA Birren B.; RT "The Genome Sequence of Ralstonia sp. strain 5_7_47FAA."; RL Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACUF01000065; EFP63666.1; -; Genomic_DNA. DR EnsemblBacteria; EFP63666; EFP63666; HMPREF1004_04590. DR PATRIC; 42065496; VBIRalSp146006_4723. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 118 AA; 13220 MW; 86CC05FD3A06FF0B CRC64; MTTAIEAGTP AADTPADSLS VPIRKTMLEK FLMGGIDRKL CAGELAILIF TAVGLRNPWV LLALPPTHLI LWLATKRDPD QFNCYLRYSK QGDFYEPRPM LRQTRNARPK GFARGELC // ID E2ZY30_PSEAI Unreviewed; 89 AA. AC E2ZY30; DT 11-JAN-2011, integrated into UniProtKB/TrEMBL. DT 11-JAN-2011, sequence version 1. DT 19-MAR-2014, entry version 9. DE SubName: Full=Conjugal transfer protein; GN ORFNames=PA39016_001650002; OS Pseudomonas aeruginosa 39016. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. OX NCBI_TaxID=798130; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=39016; RA Stewart R.M.K., Wiehlmann L., Ashelford K.E., Preston S.J., RA Campbell B.J., Neal T.J., Hall N., Tuft S., Kaye S.B., Winstanley C.; RL Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=39016; RX PubMed=21227987; DOI=10.1128/JCM.02036-10; RA Stewart R.M., Wiehlmann L., Ashelford K.E., Preston S.J., RA Frimmersdorf E., Campbell B.J., Neal T.J., Hall N., Tuft S., RA Kaye S.B., Winstanley C.; RT "Genetic characterization indicates that a specific subpopulation of RT Pseudomonas aeruginosa is associated with keratitis infections."; RL J. Clin. Microbiol. 49:993-1003(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEEX01000149; EFQ40059.1; -; Genomic_DNA. DR EnsemblBacteria; EFQ40059; EFQ40059; PA39016_001650002. DR PATRIC; 44931220; VBIPseAer163554_2223. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 89 AA; 9566 MW; 46E8ACFD7C69F9B4 CRC64; MSKATDLPGF EVPLHRSLTE PILLGGAPRT VAIANGTLAA AVGLGLQLWI PGVVLWIVGH SLAVWGARVD PQFMQVFARH IKHRPLLDV // ID E3F4R3_KETVY Unreviewed; 93 AA. AC E3F4R3; DT 11-JAN-2011, integrated into UniProtKB/TrEMBL. DT 11-JAN-2011, sequence version 1. DT 14-MAY-2014, entry version 17. DE SubName: Full=Conjugal transfer protein TrbB; GN OrderedLocusNames=EIO_2887; OS Ketogulonicigenium vulgare (strain Y25). OG Plasmid pYP1. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Ketogulonicigenium. OX NCBI_TaxID=880591; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Y25; PLASMID=pYP1; RX PubMed=21037005; DOI=10.1128/JB.01189-10; RA Xiong X.H., Han S., Wang J.H., Jiang Z.H., Chen W., Jia N., Wei H.L., RA Cheng H., Yang Y.X., Zhu B., You S., He J.Y., Hou W., Chen M.X., RA Yu C.J., Jiao Y.H., Zhang W.C.; RT "Complete genome sequence of the bacterium Ketogulonicigenium vulgare RT Y25."; RL J. Bacteriol. 193:315-316(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002225; ADO43957.1; -; Genomic_DNA. DR RefSeq; YP_003943996.1; NC_014621.1. DR EnsemblBacteria; ADO43957; ADO43957; EIO_2887. DR GeneID; 9848081; -. DR KEGG; kvu:EIO_2887; -. DR PATRIC; 43491773; VBIKetVul170732_0018. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; GHFLAVW; -. DR BioCyc; KVUL880591:GHQW-2886-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 93 AA; 9844 MW; 3F3D0F399CA93F23 CRC64; MAGGLEQLDA VPGFSIPVHR ALTEHILLGG APRSIAIVNG TLAGAVGLGL RLWLVGIAIW SVGHFLAVWA AKRDPLFVEV GRRHLRIPGH LSV // ID E3HE23_ILYPC Unreviewed; 85 AA. AC E3HE23; DT 11-JAN-2011, integrated into UniProtKB/TrEMBL. DT 11-JAN-2011, sequence version 1. DT 19-MAR-2014, entry version 15. DE SubName: Full=Type IV secretory pathway TrbD protein; GN OrderedLocusNames=Ilyop_2888; OS Ilyobacter polytropus (strain DSM 2926 / CuHBu1). OG Plasmid pILYOP02. OC Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Ilyobacter. OX NCBI_TaxID=572544; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 2926 / CuHBu1; PLASMID=pILYOP02; RX PubMed=21304735; RA Sikorski J., Chertkov O., Lapidus A., Nolan M., Lucas S., RA Del Rio T.G., Tice H., Cheng J.F., Tapia R., Han C., Goodwin L., RA Pitluck S., Liolios K., Ivanova N., Mavromatis K., Mikhailova N., RA Pati A., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J., RA Jeffries C.D., Brambilla E., Yasawong M., Rohde M., Pukall R., RA Spring S., Goker M., Woyke T., Bristow J., Eisen J.A., Markowitz V., RA Hugenholtz P., Kyrpides N.C., Klenk H.P.; RT "Complete genome sequence of Ilyobacter polytropus type strain RT (CuHbu1)."; RL Stand. Genomic Sci. 3:304-314(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002283; ADO84635.1; -; Genomic_DNA. DR RefSeq; YP_003968983.1; NC_014634.1. DR TCDB; 3.A.7.4.2; the type iv (conjugal dna-protein transfer or virb) secretory pathway (ivsp) family. DR EnsemblBacteria; ADO84635; ADO84635; Ilyop_2888. DR GeneID; 9870480; -. DR KEGG; ipo:Ilyop_2888; -. DR PATRIC; 42649772; VBIIlyPol34265_2989. DR KO; K03198; -. DR BioCyc; IPOL572544:GJ9I-2997-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 85 AA; 9881 MW; F33EB74874AB94B1 CRC64; MSIKDNYRIA VCQAITKDIP IAGGPRNIVI LNATIAGVVF LGFENIIIMP LFAFTHVLII YSAKRDQKFF ECFKRYMKHK RYYHP // ID E3HXM3_ACHXA Unreviewed; 103 AA. AC E3HXM3; DT 11-JAN-2011, integrated into UniProtKB/TrEMBL. DT 11-JAN-2011, sequence version 1. DT 13-NOV-2013, entry version 17. DE SubName: Full=Conjugal transfer protein TrbD; GN Name=trbD; OrderedLocusNames=AXYL_06538; OS Achromobacter xylosoxidans (strain A8). OG Plasmid pA81. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Alcaligenaceae; Achromobacter. OX NCBI_TaxID=762376; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=A8; PLASMID=pA81; RX PubMed=18249097; DOI=10.1016/j.resmic.2007.11.018; RA Jencova V., Strnad H., Chodora Z., Ulbrich P., Vlcek C., Hickey W.J., RA Paces V.; RT "Nucleotide sequence, organization and characterization of the RT (halo)aromatic acid catabolic plasmid pA81 from Achromobacter RT xylosoxidans A8."; RL Res. Microbiol. 159:118-127(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002288; ADP19827.1; -; Genomic_DNA. DR RefSeq; YP_003982542.1; NC_014641.1. DR RefSeq; YP_195832.1; NC_006830.1. DR EnsemblBacteria; ADP19827; ADP19827; AXYL_06538. DR GeneID; 3267804; -. DR GeneID; 9900873; -. DR KEGG; axy:AXYL_06538; -. DR PATRIC; 42566191; VBIAchXyl160325_6545. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; LRMMAKS; -. DR BioCyc; AXYL762376:GJUB-6792-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 103 AA; 11860 MW; D54CECAB78AD75E2 CRC64; MALRAIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QEVRATVFGI ALWFGALFVL RLMAKSDPKL RHVYLRHRRY KPYYPARSTP FRENTPSQGK QYK // ID E3HZH5_RHOVT Unreviewed; 95 AA. AC E3HZH5; DT 11-JAN-2011, integrated into UniProtKB/TrEMBL. DT 11-JAN-2011, sequence version 1. DT 01-MAY-2013, entry version 14. DE SubName: Full=Conjugal transfer protein TrbD; GN OrderedLocusNames=Rvan_1763; OS Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / OS LMG 4299). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Hyphomicrobiaceae; Rhodomicrobium. OX NCBI_TaxID=648757; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299; RX PubMed=21705585; DOI=10.1128/JB.05453-11; RG US DOE Joint Genome Institute; RA Brown P.J., Kysela D.T., Buechlein A., Hemmerich C., Brun Y.V.; RT "Genome sequences of eight morphologically diverse RT alphaproteobacteria."; RL J. Bacteriol. 193:4567-4568(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002292; ADP71010.1; -; Genomic_DNA. DR RefSeq; YP_004012109.1; NC_014664.1. DR EnsemblBacteria; ADP71010; ADP71010; Rvan_1763. DR GeneID; 9932552; -. DR KEGG; rva:Rvan_1763; -. DR PATRIC; 42670753; VBIRhoVan113057_1857. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR BioCyc; RVAN648757:GHZT-1788-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10613 MW; 414E1F4E501BF903 CRC64; MGALRRSPLY RALHRPNLFL GGEREPVLMT AIICAGLAVS SLNLIAITIG VGLWLVLIGV FRMMAKADPF MTRVYLRQLR YGAYFTARSR GSRLD // ID E3I3K1_RHOVT Unreviewed; 95 AA. AC E3I3K1; DT 11-JAN-2011, integrated into UniProtKB/TrEMBL. DT 11-JAN-2011, sequence version 1. DT 01-MAY-2013, entry version 14. DE SubName: Full=Conjugal transfer protein TrbD; GN OrderedLocusNames=Rvan_1075; OS Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / OS LMG 4299). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Hyphomicrobiaceae; Rhodomicrobium. OX NCBI_TaxID=648757; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299; RX PubMed=21705585; DOI=10.1128/JB.05453-11; RG US DOE Joint Genome Institute; RA Brown P.J., Kysela D.T., Buechlein A., Hemmerich C., Brun Y.V.; RT "Genome sequences of eight morphologically diverse RT alphaproteobacteria."; RL J. Bacteriol. 193:4567-4568(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002292; ADP70348.1; -; Genomic_DNA. DR RefSeq; YP_004011447.1; NC_014664.1. DR EnsemblBacteria; ADP70348; ADP70348; Rvan_1075. DR GeneID; 9931853; -. DR KEGG; rva:Rvan_1075; -. DR PATRIC; 42669298; VBIRhoVan113057_1141. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR BioCyc; RVAN648757:GHZT-1089-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10651 MW; 914C6FA165B5A1D6 CRC64; MGELRRTPLY RALHRPNLFL GGEREPVLLT AIICAGLAVS SLNLIAIMIG AGLWLVLIGA FRMMAKADPF MTRVYLRQLR YGAYFPARSR ASRLD // ID E3I8N3_RHOVT Unreviewed; 95 AA. AC E3I8N3; DT 11-JAN-2011, integrated into UniProtKB/TrEMBL. DT 11-JAN-2011, sequence version 1. DT 01-MAY-2013, entry version 14. DE SubName: Full=Conjugal transfer protein TrbD; GN OrderedLocusNames=Rvan_2803; OS Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / OS LMG 4299). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Hyphomicrobiaceae; Rhodomicrobium. OX NCBI_TaxID=648757; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299; RX PubMed=21705585; DOI=10.1128/JB.05453-11; RG US DOE Joint Genome Institute; RA Brown P.J., Kysela D.T., Buechlein A., Hemmerich C., Brun Y.V.; RT "Genome sequences of eight morphologically diverse RT alphaproteobacteria."; RL J. Bacteriol. 193:4567-4568(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002292; ADP72012.1; -; Genomic_DNA. DR RefSeq; YP_004013111.1; NC_014664.1. DR EnsemblBacteria; ADP72012; ADP72012; Rvan_2803. DR GeneID; 9933609; -. DR KEGG; rva:Rvan_2803; -. DR PATRIC; 42672975; VBIRhoVan113057_2949. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR BioCyc; RVAN648757:GHZT-2845-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10657 MW; 720E0A2161B27D07 CRC64; MGELRRTPLY RALHRPNLFL GGEREPVMMT AIICAGLAVS SLNLIAIMIG AGLWLVLIGA FRTMAKADPF MTRIYLRQLR YGAYFPARSR GSRLD // ID E4LJT6_9FIRM Unreviewed; 88 AA. AC E4LJT6; DT 08-FEB-2011, integrated into UniProtKB/TrEMBL. DT 08-FEB-2011, sequence version 1. DT 18-SEP-2013, entry version 5. DE SubName: Full=Uncharacterized protein; GN ORFNames=HMPREF9162_2181; OS Selenomonas sp. oral taxon 137 str. F0430. OC Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; OC Selenomonas. OX NCBI_TaxID=879310; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=F0430; RA Durkin A.S., Madupu R., Torralba M., Gillis M., Methe B., Sutton G., RA Nelson K.E.; RL Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AENV01000008; EFR40814.1; -; Genomic_DNA. DR EnsemblBacteria; EFR40814; EFR40814; HMPREF9162_2181. DR PATRIC; 45041505; VBISelSp169704_1187. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 88 AA; 10374 MW; 4EE613E09F93BF36 CRC64; MDVEKMPEGY EIPIHRSLVA PLYWMGVPRN LFIAEIFLAI LGGVIFKTFS VMIIAGIAHY IFHMLGQQDA QFHEVFWQSR LHKVFYYR // ID E4PRW0_MARAH Unreviewed; 41 AA. AC E4PRW0; DT 08-FEB-2011, integrated into UniProtKB/TrEMBL. DT 08-FEB-2011, sequence version 1. DT 29-MAY-2013, entry version 10. DE SubName: Full=Conjugal transfer protein TrbD-like protein; GN OrderedLocusNames=HP15_p42g50; OS Marinobacter adhaerens (strain HP15). OG Plasmid pHP-42. OC Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; OC Alteromonadaceae; Marinobacter. OX NCBI_TaxID=225937; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=HP15; RA Gaerdes A.A.M., Kaeppel E., Shezad A., Seebah S., Teeling H., RA Yarza P., Gloeckner F.O., Ullrich M.S.; RT "Complete genome sequence of Marinobacter adhaerens type strain RT (HP15)."; RL Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001979; ADP99994.1; -; Genomic_DNA. DR RefSeq; YP_005888100.1; NC_017508.1. DR EnsemblBacteria; ADP99994; ADP99994; HP15_p42g50. DR GeneID; 12404542; -. DR KEGG; mad:HP15_p42g50; -. DR KO; K03198; -. DR BioCyc; MADH225937:GLG5-4470-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 41 AA; 5047 MW; 1273FE924B177B9D CRC64; MAKSDPKLRH VYLRHRRYKA YYPARSTPYR ENTTSQGKQY K // ID E5BFJ6_9FUSO Unreviewed; 85 AA. AC E5BFJ6; DT 08-FEB-2011, integrated into UniProtKB/TrEMBL. DT 08-FEB-2011, sequence version 1. DT 18-SEP-2013, entry version 5. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=FSBG_00374; OS Fusobacterium gonidiaformans 3-1-5R. OC Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; OC Fusobacterium. OX NCBI_TaxID=469605; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=3_1_5R; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Allen-Vercoe E., RA Strauss J., Ambrose C., Lander E., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Fusobacterium sp. 3_1_5R."; RL Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG657971; EFS20877.1; -; Genomic_DNA. DR EnsemblBacteria; EFS20877; EFS20877; FSBG_00374. DR PATRIC; 30292214; VBIFusSp3217_0900. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 85 AA; 9835 MW; 328CC5AFB7AEFB15 CRC64; MDEDFRVPVC QGLIKPLTIL GISREAMILN VALGASFVLA VRAVYMLPVF FVTHYLLYLV CKRDPLVINI FMKKYVKQKN YFYQG // ID E5BI47_9FUSO Unreviewed; 83 AA. AC E5BI47; DT 08-FEB-2011, integrated into UniProtKB/TrEMBL. DT 08-FEB-2011, sequence version 1. DT 18-SEP-2013, entry version 5. DE SubName: Full=Uncharacterized protein; GN ORFNames=FSBG_01667; OS Fusobacterium gonidiaformans 3-1-5R. OC Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; OC Fusobacterium. OX NCBI_TaxID=469605; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=3_1_5R; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., RA Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., RA Howarth C., Jen D., Larson L., Lewis B., Mehta T., Park D., RA Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., RA Stolte C., Sykes S., Walk T., White J., Yandava C., Allen-Vercoe E., RA Strauss J., Ambrose C., Lander E., Nusbaum C., Galagan J., Birren B.; RT "The Genome Sequence of Fusobacterium sp. 3_1_5R."; RL Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GG657974; EFS22170.1; -; Genomic_DNA. DR EnsemblBacteria; EFS22170; EFS22170; FSBG_01667. DR PATRIC; 30294887; VBIFusSp3217_1672. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 83 AA; 9656 MW; 57FEA0E364C0A48F CRC64; MDEELRQPIC KGFIEEPTVA GGAREPVVLN FLLGLISIFA TATFYFLPIF FVLHGFIIKF TKEDPFFFLV LRNHLTYKDY YDA // ID E5BKD3_9FUSO Unreviewed; 83 AA. AC E5BKD3; DT 08-FEB-2011, integrated into UniProtKB/TrEMBL. DT 08-FEB-2011, sequence version 1. DT 18-SEP-2013, entry version 6. DE SubName: Full=Uncharacterized protein; GN ORFNames=FSEG_00563; OS Fusobacterium necrophorum D12. OC Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; OC Fusobacterium. OX NCBI_TaxID=556263; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=D12; RG The Broad Institute Genome Sequencing Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Strauss J., Ambrose C.E., RA Allen-Vercoe E., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., RA Haas B., Abouelleil A., Alvarado L., Arachchi H.M., Berlin A., RA Brown A., Chapman S.B., Chen Z., Dunbar C., Freedman E., Gearin G., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Howarth C., RA Larson L., Lui A., MacDonald P.J.P., Mehta T., Montmayeur A., RA Murphy C., Neiman D., Pearson M., Priest M., Roberts A., Saif S., RA Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., Wortman J., RA Nusbaum C., Birren B.; RT "The Genome Sequence of Fusobacterium sp. D12."; RL Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACDG02000024; EFS22956.1; -; Genomic_DNA. DR EnsemblBacteria; EFS22956; EFS22956; FSEG_00563. DR PATRIC; 28738313; VBIFusSp43879_0458. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 83 AA; 9656 MW; 57FEA0E364C0A48F CRC64; MDEELRQPIC KGFIEEPTVA GGAREPVVLN FLLGLISIFA TATFYFLPIF FVLHGFIIKF TKEDPFFFLV LRNHLTYKDY YDA // ID E5L724_EDWTA Unreviewed; 916 AA. AC E5L724; DT 08-FEB-2011, integrated into UniProtKB/TrEMBL. DT 08-FEB-2011, sequence version 1. DT 16-APR-2014, entry version 10. DE SubName: Full=Conjugal transfer protein; GN Name=triC; ORFNames=ETCK41_p22; OS Edwardsiella tarda. OG Plasmid pCK41. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Edwardsiella. OX NCBI_TaxID=636; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=CK41; PLASMID=pCK41; RX PubMed=22342431; DOI=10.1016/j.micpath.2012.01.006; RA Yu J.E., Cho M.Y., Kim J.W., Kang H.Y.; RT "Large antibiotic-resistance plasmid of Edwardsiella tarda contributes RT to virulence in fish."; RL Microb. Pathog. 52:259-266(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HQ332785; ADQ43847.1; -; Genomic_DNA. DR RefSeq; YP_004032874.1; NC_014725.1. DR GeneID; 10007451; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR003593; AAA+_ATPase. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SMART; SM00382; AAA; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 916 AA; 105115 MW; FF3840F26454AAFB CRC64; MTILNKALTR PAALWGVPLV PLLFTLCILT LAAVWSRFYW LLLLLIPAFI ELRRLAKEDI HFFDLKLLAF KTRGNRAATR HFGTKALVAN QYDAIDVTEF IKHMRLNESI PLSRYLPWSS HLHEQVVKNK KGDFVSTWEI GGIIFECEDE HYLATLDMQL NNVIRSFEGL PVTFYTHLVS DEFTDTLECE SGIPFSDEIA RLFYASREGK PFYQRRLFFT VCFNPHTGIE RATMKQKSLG ERKTLLDNAL QVMQEHRQAI GTALSRYAAR PLGTYEENGH VFSSQLAFYN FLITGRWQKV RVTRTPFYDV LGGTDIFPST DIGQVSHTDG QSYFRGLEIK DYSTETITGL YDSLLYARCR YLFTQSYTCM GKDEARGCIR TIEKRLKSAE DDAISQQEDL KVARDMLQSG IISFGKYHQT LIVSAPTSEQ VIRDTNTLAD TLKDLGFIMT LSRESLSAAY LAQLPGVYHL RPRLVPVSSL NYAEMVSFHN FHPHKRDGNA WGEAIAVVPT PSGGCQYVNL HNSQADVDEF SEKPPGNTML LGSTGTGKST LLMMFQHLMQ KYRRPESFAP GATKKRFTSV VFDKDRSAEM SIRLQGGSYF RFRSGEKTGL NPFALAPTKR NRNFLKKLMR MMCTRDGKPL DPRDEERLSE AVDTIMLDYP PELRRNGITR MLEVLHEAPT KDARMNGLRI RLQQWAQGGE FGWVFDNDVD TFDIDNIDNF GIDGTEFLND KDVRSPLTFY LLYRVTSLLD GRRLVIFMDE FWKWLQDPEF SKFALDMLKV IRKLNGIFFP ATQSPEEMCK HEISAAIIEQ CSTRIFMANQ QAKEYDYVDM LRVPKAVYDI VTTLDPYARQ MVIMKSPLRR GDVRPYIAQI TLDLSGLGRY TKLLSASADN LKIFDEIWQE GMKPEDWKDE MLRRAV // ID E5Y6Y5_BILWA Unreviewed; 97 AA. AC E5Y6Y5; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 18-SEP-2013, entry version 5. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=HMPREF0179_01948; OS Bilophila wadsworthia 3_1_6. OC Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; OC Desulfovibrionaceae; Bilophila. OX NCBI_TaxID=563192; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=3_1_6; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Earl A., Feldgarden M., Young S.K., Gargeya S., Zeng Q., RA Alvarado L., Berlin A., Bochicchio J., Chapman S.B., Chen Z., RA Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., RA Heilman E., Heiman D., Howarth C., Mehta T., Neiman D., Pearson M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA White J., Yandava C., Allen-Vercoe E., Sibley C., Ambrose C.E., RA Strauss J., Daigneault M., Haas B., Nusbaum C., Birren B.; RL Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=3_1_6; RG The Broad Institute Genomics Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Sibley C., Strauss J., RA Allen-Vercoe E., Walker B., Young S., Zeng Q., Gargeya S., RA Fitzgerald M., Haas B., Abouelleil A., Allen A.W., Alvarado L., RA Arachchi H.M., Berlin A.M., Chapman S.B., Gainer-Dewar J., RA Goldberg J., Griggs A., Gujja S., Hansen M., Howarth C., Imamovic A., RA Ireland A., Larimer J., McCowan C., Murphy C., Pearson M., Poon T.W., RA Priest M., Roberts A., Saif S., Shea T., Sisk P., Sykes S., RA Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Bilophila wadsworthia 3_1_6."; RL Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADCP02000001; EFV44223.1; -; Genomic_DNA. DR EnsemblBacteria; EFV44223; EFV44223; HMPREF0179_01948. DR PATRIC; 44719987; VBIBilWad76794_2092. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 97 AA; 11317 MW; 58FB8005681F0323 CRC64; MAFTPFHHSL IRPNLILGCD REMIMISGIA AFALIATALE WVAAFASVLL WTLSLLLFRR MAKADPLLRF VYIRHRAYQA YYPPRSTPFR VNTREYR // ID E5Y8Z9_BILWA Unreviewed; 98 AA. AC E5Y8Z9; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 18-SEP-2013, entry version 5. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=HMPREF0179_02667; OS Bilophila wadsworthia 3_1_6. OC Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; OC Desulfovibrionaceae; Bilophila. OX NCBI_TaxID=563192; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=3_1_6; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Earl A., Feldgarden M., Young S.K., Gargeya S., Zeng Q., RA Alvarado L., Berlin A., Bochicchio J., Chapman S.B., Chen Z., RA Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., RA Heilman E., Heiman D., Howarth C., Mehta T., Neiman D., Pearson M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA White J., Yandava C., Allen-Vercoe E., Sibley C., Ambrose C.E., RA Strauss J., Daigneault M., Haas B., Nusbaum C., Birren B.; RL Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=3_1_6; RG The Broad Institute Genomics Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Sibley C., Strauss J., RA Allen-Vercoe E., Walker B., Young S., Zeng Q., Gargeya S., RA Fitzgerald M., Haas B., Abouelleil A., Allen A.W., Alvarado L., RA Arachchi H.M., Berlin A.M., Chapman S.B., Gainer-Dewar J., RA Goldberg J., Griggs A., Gujja S., Hansen M., Howarth C., Imamovic A., RA Ireland A., Larimer J., McCowan C., Murphy C., Pearson M., Poon T.W., RA Priest M., Roberts A., Saif S., Shea T., Sisk P., Sykes S., RA Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Bilophila wadsworthia 3_1_6."; RL Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADCP02000001; EFV43548.1; -; Genomic_DNA. DR EnsemblBacteria; EFV43548; EFV43548; HMPREF0179_02667. DR PATRIC; 44721681; VBIBilWad76794_2995. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 11066 MW; 28A72B0281D49419 CRC64; MRRYLPIHQS LHRHAHVLGA ERELVMTSAL IALLVGVGGL TAVSIVSAIV FWIASVFALQ RMAKADPIMS RVWLRHIKQQ EFYPARASRW RLVGGFTC // ID E5YNJ2_9ENTR Unreviewed; 627 AA. AC E5YNJ2; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 18-SEP-2013, entry version 6. DE SubName: Full=VirB4 family type IV secretion/conjugal transfer ATPase; GN ORFNames=HMPREF0864_04108; OS Enterobacteriaceae bacterium 9_2_54FAA. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae. OX NCBI_TaxID=469613; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=9_2_54FAA; RG The Broad Institute Genome Sequencing Platform; RA Ward D., Earl A., Feldgarden M., Young S.K., Gargeya S., Zeng Q., RA Alvarado L., Berlin A., Bochicchio J., Chapman S.B., Chen Z., RA Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., RA Heilman E., Heiman D., Howarth C., Mehta T., Neiman D., Pearson M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA White J., Yandava C., Allen-Vercoe E., Ambrose C., Strauss J., RA Sibley C., Haas B., Nusbaum C., Birren B.; RL Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=9_2_54FAA; RG The Broad Institute Genomics Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Allen-Vercoe E., RA Ambrose C., Strauss J., Sibley C., Walker B., Young S.K., Zeng Q., RA Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Allen A.W., RA Alvarado L., Arachchi H.M., Berlin A.M., Chapman S.B., RA Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M., RA Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., RA Murphy C., Pearson M., Poon T.W., Priest M., Roberts A., Saif S., RA Shea T., Sisk P., Sykes S., Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Enterobacteriaceae bacterium 9_2_54FAA."; RL Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADCU02000002; EFV38421.1; -; Genomic_DNA. DR EnsemblBacteria; EFV38421; EFV38421; HMPREF0864_04108. DR PATRIC; 44732776; VBIEntBac91544_4272. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 627 AA; 70412 MW; 304CD6FF8428D843 CRC64; MVTLNKALTR PAMLFGIPMV PLVIVSGAII LLAIYLTKLL LLFLPVSWFV MNQMARKDAH VFGLAFLKLK TRGNKTCNTH YGATAFLAND YDAVDITEFI NTMRLNERVT LTKHIPYSSH IHENVIKTRG SDLIATWEIG GTAFECDTEE NLDILSGQFN NLIKSFEGRP VTFYVHNIRE TYHDHFDGHS GNDFADTVSE RYYSTIENHP FRHNRLFFTA CYMPFVGLDK VERKRMSDGQ KQHALDSALK EMLEICQTVG TSLSRFTANQ LGAYEENGRV FSSQLSFYRR LLSGVWQKTA VTRTPFYETL GTTDLFFTGD AGQSNNVNGK TFFRGLEVKD YAPESFTGIM NVLLYAPCDY VITQSFTCMA KDEAQKHIKQ TVKRLRSTED DAISQQEDLF VALDMLQAGH IAFGKYHFSL MVSAPGTERL IKDTNSLINA FTDLGITPTL STLSLPAAYL AQMPGVYTLR PRLVPISSQN FAELASFHNF YTGKRDKNPW GEALCVLKTP SGGAYYMNLH NSMLNKDDFN EKNLGNTSVI GTAGSGKTML MAFIQVMMQK YRQPRSFSPQ AKTQRLRGLR ANDAKNHANS VSSLFILKLI GTAFTATSVV MVGLRDGSAW KKEIILR // ID E5ZF18_CAMJU Unreviewed; 922 AA. AC E5ZF18; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 16-APR-2014, entry version 11. DE SubName: Full=Type IV secretion/conjugal transfer ATPase, VirB4 family protein; GN ORFNames=CSS_1676; OS Campylobacter jejuni subsp. jejuni 305. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=691337; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=305; RA Takamiya Wik M., Ozen A.I., Rasmussen M., Gilbert T., Alter T., RA Ussery D.W., Knoechel S.; RL Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=305; RX PubMed=21914871; DOI=10.1128/JB.05753-11; RA Takamiya M., Ozen A., Rasmussen M., Alter T., Gilbert T., Ussery D.W., RA Knochel S.; RT "Genome Sequences of Two Stress-Tolerant Campylobacter jejuni Poultry RT Strains, 305 and DFVF1099."; RL J. Bacteriol. 193:5546-5547(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADHL01000251; EFV08350.1; -; Genomic_DNA. DR EnsemblBacteria; EFV08350; EFV08350; CSS_1676. DR PATRIC; 51872987; VBICamJej148309_1447. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 922 AA; 106128 MW; 1ECAF75A270332BA CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGS IILVAFYSQN IFLVGFSIPV FFIMKAMTKK DDFIFRLMFL KMRFFSNPAS KNYYKAKTYS TNSYRQMPPN SNFPKISVFG LNAEPNFEKL IPFSSLINDS VVITKDYLLM TTWEIGGISF EAEDDDELDI KNDLLNMLFK SFANEPISFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLKKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSK QLEFYNYLLG GKFNPIRVLP SPIDQYLNGN LQNIQFGHDT IQFNQNDSTK RFARCIEIKD YTNETFAGIL DILMYLDVEY TITQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVEQID EALDQLTNGE ISFGKYHFSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN FSSLIALHNF SMGKRDKNCW GDAVSILKTP NKQPYYFNFH QSSGVNKNDF GELFLANTLI LGQSGGGKTV FMNFIVDQMM KYASKDTFPD DIPEENRKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVENT QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDN LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSVEDFLK LKNATTLIEQ SATMVFLPNP KAKEEEYVKG VGLSYDEYMI IKGFNVAKRQ FLIKRQDEKV ICTLDLSSLG NENLKILSTG TAHIDTIEKI FSQENKSLDE KVLELKEFYK NS // ID E6PZW0_9ZZZZ Unreviewed; 87 AA. AC E6PZW0; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Uncharacterized protein; GN ORFNames=CARN3_1473; OS mine drainage metagenome. OC unclassified sequences; metagenomes; ecological metagenomes. OX NCBI_TaxID=410659; RN [1] RP NUCLEOTIDE SEQUENCE. RA Bertin P.N., Heinrich-Salmeron A., Pelletier E., Goulhen-Chollet F., RA Arsene-Ploetze F., Gallien S., Calteau A., Vallenet D., Casiot C., RA Chane-Woon-Ming B., Giloteaux L., Barakat M., Bonnefoy V., Bruneel O., RA Chandler M., Cleiss J., Duran R., Elbaz-Poulichet F., Fonknechten N., RA Lauga B., Mornico D., Ortet P., Schaeffer C., Siguier P., RA Alexander Thil Smith A., Van Dorsselaer A., Weissenbach J., RA Medigue C., Le Paslier D.; RT "Diversity of trophic interactions inside an arsenic-rich microbial RT ecosystem."; RL Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CABN01000139; CBI00469.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 87 AA; 10056 MW; 4117013D2BEE4C3F CRC64; MTKRGEPLPI NQALNRPRAK LGLDLTAWMA IIFVCVTVFL VGLRFLAMMA FPTLAMGAWL IVRKHPKMFQ LWGLSLNQKS YYDPRKY // ID E6QB74_9ZZZZ Unreviewed; 127 AA. AC E6QB74; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Uncharacterized protein; GN ORFNames=CARN5_2086; OS mine drainage metagenome. OC unclassified sequences; metagenomes; ecological metagenomes. OX NCBI_TaxID=410659; RN [1] RP NUCLEOTIDE SEQUENCE. RA Bertin P.N., Heinrich-Salmeron A., Pelletier E., Goulhen-Chollet F., RA Arsene-Ploetze F., Gallien S., Calteau A., Vallenet D., Casiot C., RA Chane-Woon-Ming B., Giloteaux L., Barakat M., Bonnefoy V., Bruneel O., RA Chandler M., Cleiss J., Duran R., Elbaz-Poulichet F., Fonknechten N., RA Lauga B., Mornico D., Ortet P., Schaeffer C., Siguier P., RA Alexander Thil Smith A., Van Dorsselaer A., Weissenbach J., RA Medigue C., Le Paslier D.; RT "Diversity of trophic interactions inside an arsenic-rich microbial RT ecosystem."; RL Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CABP01000066; CBI04450.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 127 AA; 14220 MW; 940AD4165983E252 CRC64; MEAQGTRRLP IHVSLTRPLL VAGGEKEWTQ YNWLICLGIG VMLGQPWTLG VMLAIASIVQ YFLRISAKND PQGLGILERH WKYQPFYPDA AVDGAKGYKP HEKQGLGEGI VVQAFKLFSQ GKKRRGK // ID E6QCI7_9ZZZZ Unreviewed; 101 AA. AC E6QCI7; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Putative Type IV secretory pathway, TrbD component; GN ORFNames=CARN5_1604; OS mine drainage metagenome. OC unclassified sequences; metagenomes; ecological metagenomes. OX NCBI_TaxID=410659; RN [1] RP NUCLEOTIDE SEQUENCE. RA Bertin P.N., Heinrich-Salmeron A., Pelletier E., Goulhen-Chollet F., RA Arsene-Ploetze F., Gallien S., Calteau A., Vallenet D., Casiot C., RA Chane-Woon-Ming B., Giloteaux L., Barakat M., Bonnefoy V., Bruneel O., RA Chandler M., Cleiss J., Duran R., Elbaz-Poulichet F., Fonknechten N., RA Lauga B., Mornico D., Ortet P., Schaeffer C., Siguier P., RA Alexander Thil Smith A., Van Dorsselaer A., Weissenbach J., RA Medigue C., Le Paslier D.; RT "Diversity of trophic interactions inside an arsenic-rich microbial RT ecosystem."; RL Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CABP01000089; CBI04913.1; -; Genomic_DNA. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 101 AA; 11313 MW; 7B164F8A07BF33ED CRC64; MDQSPRQEIS IHQSLHKPML VLGGERNLVL MLGVLAGIFI FSLAQLWAAV IGIILWVFGT WGLAQLAKYD PILSKTGKRS IQYKKYYPAS ATPFARNRAI K // ID E6QCL5_9ZZZZ Unreviewed; 125 AA. AC E6QCL5; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Uncharacterized protein; GN ORFNames=CARN5_1571; OS mine drainage metagenome. OC unclassified sequences; metagenomes; ecological metagenomes. OX NCBI_TaxID=410659; RN [1] RP NUCLEOTIDE SEQUENCE. RA Bertin P.N., Heinrich-Salmeron A., Pelletier E., Goulhen-Chollet F., RA Arsene-Ploetze F., Gallien S., Calteau A., Vallenet D., Casiot C., RA Chane-Woon-Ming B., Giloteaux L., Barakat M., Bonnefoy V., Bruneel O., RA Chandler M., Cleiss J., Duran R., Elbaz-Poulichet F., Fonknechten N., RA Lauga B., Mornico D., Ortet P., Schaeffer C., Siguier P., RA Alexander Thil Smith A., Van Dorsselaer A., Weissenbach J., RA Medigue C., Le Paslier D.; RT "Diversity of trophic interactions inside an arsenic-rich microbial RT ecosystem."; RL Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CABP01000090; CBI04941.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 125 AA; 13580 MW; 983672994E0E47B1 CRC64; MAAENTRRLP LHPSLARPML VAGGEREATF ALWFVCLSIP VLVSLWFIPV GLIVGGVGQS FLRTLAKHDP QSFGVVRRHW SQQAVYPGGA SAYAPVKYKA PKEQTQSAAS GGLLKALSKL LRKKK // ID E6QMV5_9ZZZZ Unreviewed; 106 AA. AC E6QMV5; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Uncharacterized protein; GN ORFNames=CARN6_2058; OS mine drainage metagenome. OC unclassified sequences; metagenomes; ecological metagenomes. OX NCBI_TaxID=410659; RN [1] RP NUCLEOTIDE SEQUENCE. RA Bertin P.N., Heinrich-Salmeron A., Pelletier E., Goulhen-Chollet F., RA Arsene-Ploetze F., Gallien S., Calteau A., Vallenet D., Casiot C., RA Chane-Woon-Ming B., Giloteaux L., Barakat M., Bonnefoy V., Bruneel O., RA Chandler M., Cleiss J., Duran R., Elbaz-Poulichet F., Fonknechten N., RA Lauga B., Mornico D., Ortet P., Schaeffer C., Siguier P., RA Alexander Thil Smith A., Van Dorsselaer A., Weissenbach J., RA Medigue C., Le Paslier D.; RT "Diversity of trophic interactions inside an arsenic-rich microbial RT ecosystem."; RL Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CABQ01000240; CBI08576.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 106 AA; 11821 MW; 93F1BEFDA455936B CRC64; MLGYSENYSA LSRPRLIAGV GMQAIAFIWP LAVIVAIEVD SRAVQILAIV IAGLAHGILA WAYKADPEIF AVYRAYTDMG DLYQPWPRAN LVRQRRPVGY GRNLRC // ID E6QNU5_9ZZZZ Unreviewed; 125 AA. AC E6QNU5; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Uncharacterized protein; GN ORFNames=CARN6_2443; OS mine drainage metagenome. OC unclassified sequences; metagenomes; ecological metagenomes. OX NCBI_TaxID=410659; RN [1] RP NUCLEOTIDE SEQUENCE. RA Bertin P.N., Heinrich-Salmeron A., Pelletier E., Goulhen-Chollet F., RA Arsene-Ploetze F., Gallien S., Calteau A., Vallenet D., Casiot C., RA Chane-Woon-Ming B., Giloteaux L., Barakat M., Bonnefoy V., Bruneel O., RA Chandler M., Cleiss J., Duran R., Elbaz-Poulichet F., Fonknechten N., RA Lauga B., Mornico D., Ortet P., Schaeffer C., Siguier P., RA Alexander Thil Smith A., Van Dorsselaer A., Weissenbach J., RA Medigue C., Le Paslier D.; RT "Diversity of trophic interactions inside an arsenic-rich microbial RT ecosystem."; RL Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CABQ01000291; CBI08916.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 125 AA; 13625 MW; 84FA7083E4AF45F4 CRC64; MAAELTRRLP LHPSLTRPML VAGGEREATF ALWFVCLSIP VLVSLWFIPV GLIVGGVGQS FLRTLAKHDP QSFGVVRRHW SQQAVYLGGA SAYAPVKYKA PKEQTQSAAS GGLLKALSKL LRKKK // ID E6QSL7_9ZZZZ Unreviewed; 88 AA. AC E6QSL7; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Uncharacterized protein; GN ORFNames=CARN7_1006; OS mine drainage metagenome. OC unclassified sequences; metagenomes; ecological metagenomes. OX NCBI_TaxID=410659; RN [1] RP NUCLEOTIDE SEQUENCE. RA Bertin P.N., Heinrich-Salmeron A., Pelletier E., Goulhen-Chollet F., RA Arsene-Ploetze F., Gallien S., Calteau A., Vallenet D., Casiot C., RA Chane-Woon-Ming B., Giloteaux L., Barakat M., Bonnefoy V., Bruneel O., RA Chandler M., Cleiss J., Duran R., Elbaz-Poulichet F., Fonknechten N., RA Lauga B., Mornico D., Ortet P., Schaeffer C., Siguier P., RA Alexander Thil Smith A., Van Dorsselaer A., Weissenbach J., RA Medigue C., Le Paslier D.; RT "Diversity of trophic interactions inside an arsenic-rich microbial RT ecosystem."; RL Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CABR01000076; CBI10239.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 88 AA; 10144 MW; 435E60E473C176E2 CRC64; MLAGGEFKLV VANLAFGFMA IALLHVWQYV LIVGGLHGVL IFAAKSDLQA REIYLEYTRQ SDRYTPWSVP RHYRFNRRPV GFGRDQML // ID E6RWY5_CAMJS Unreviewed; 922 AA. AC E6RWY5; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 16-APR-2014, entry version 13. DE SubName: Full=Type IV secretion system protein VirB4, putative; GN OrderedLocusNames=CJS3_pTet0031; OS Campylobacter jejuni subsp. jejuni (strain S3). OG Plasmid pTet. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=718271; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=S3; PLASMID=pTet; RX PubMed=21217004; DOI=10.1128/JB.01475-10; RA Cooper K.K., Cooper M.A., Zuccolo A., Law B., Joens L.A.; RT "Complete genome sequence of Campylobacter jejuni strain S3."; RL J. Bacteriol. 193:1491-1492(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001961; ADT73534.1; -; Genomic_DNA. DR RefSeq; YP_005660371.1; NC_017282.1. DR EnsemblBacteria; ADT73534; ADT73534; CJS3_pTet0031. DR GeneID; 12245750; -. DR KEGG; cjs:CJS3_pTet0031; -. DR PATRIC; 45420620; VBICamJej157961_1826. DR KO; K03199; -. DR BioCyc; CJEJ718271:GLAE-1848-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 922 AA; 106007 MW; F0FFAFF8C9759CB4 CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGS IILVAFYSQN IFLVGFSIPV FFIMKAMTKK DDFIFRLMFL KMRFFSNPAS KNYYKAKTYS TNSYRQMPPN SNFPKISVFG LNAEPNFEKL IPFSSLINDS VVITKDYFLM TTWEIGGISF EAEEDDELDI KNDLLNMLFK SFANESVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLKKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSK QLEFYNYLLG GKFNPIRVLP SPIDQYLNGN LQNIQFGHDT IQFNQNDSTK RFARCIEIKD YTNETFAGIL DILMYLDVEY TITQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVAQID EALDQLTNGE ISFGKYHFSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN FSSLIALHNF SMGKRDKNCW GDAVSILKTP NKQPYYFNFH QSSGVNKNDF GELFLANTLI LGQSGGGKTV FMNFIVDQMM KYASKDTFPD DIPEENKKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVEST QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDN LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSVEDFLK LKNAATLIEQ SATMVFLPNP KAKEEEYVNG IGLSYDEYMI IKGFNPAKRQ FLIKRQDEKV ICTLDLSSLG SENLKILSTG TAHIDTIEKI FSQENKSLDE KVLELREFYK NS // ID E6S1B4_CAMJC Unreviewed; 922 AA. AC E6S1B4; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 14-MAY-2014, entry version 17. DE SubName: Full=Type IV secretion system protein VirB4; GN OrderedLocusNames=ICDCCJ07001_pTet000017; OS Campylobacter jejuni subsp. jejuni serotype HS:41 (strain OS ICDCCJ07001). OG Plasmid pTet. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=757425; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ICDCCJ07001; PLASMID=pTet; RX PubMed=21124772; DOI=10.1371/journal.pone.0015060; RA Zhang M., He L., Li Q., Sun H., Gu Y., You Y., Meng F., Zhang J.; RT "Genomic Characterization of the Guillain-Barre Syndrome-Associated RT Campylobacter jejuni ICDCCJ07001 Isolate."; RL PLoS ONE 5:E15060-E15060(2010). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002030; ADT66942.1; -; Genomic_DNA. DR RefSeq; YP_004065600.1; NC_014801.1. DR EnsemblBacteria; ADT66942; ADT66942; ICDCCJ07001_pTet000017. DR GeneID; 10035245; -. DR KEGG; cjn:ICDCCJ_pTet000017; -. DR PATRIC; 45192047; VBICamJej156877_0026. DR HOGENOM; HOG000119263; -. DR KO; K03199; -. DR OMA; RHESNER; -. DR BioCyc; CJEJ757425:GJ7N-1650-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 922 AA; 106184 MW; 3BB78F2C6009D534 CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGC IILIAFYSQN IFLVGFSIPV FFIMKAMTKK DDFIFRLMFL KMRFLSNPAS KNYHKVKTYS TNSYRQMPPN SNFPKISVFG LNAEPSFEKL IPFSSLINDF VVITKDYFLM TTWEIGGISF EAEEDDELDI KNDLLNMLFK SFSNESVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLRKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TINLFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSE QLEFYNYLIS GKFNPIRVLP SPIDQYLNGN LQNIQFGHDT IQFNQNDSTK RFARCIEIKD YTNETFAGIL DILMYLDVEY TITQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVAQID EALDQLTNGE ISFGKYHFSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN FSSLIALHNF SMGKRDKNCW GDAVSILKTP NKQPYYFNFH QSSGVNKNDF GELFLANTLI LGQSGGGKTV FMNFIVDQMM KYASKDTFPD DIPEENKKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVEST QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDN LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSVEDFLK LKNATTLIEQ SATMVFLPNP KAKEEEYVKG VGLSYDEYMI IKGFNPAKRQ FLIKRQDEKV ICTLDLSSLG NENLKILSTG TAHIDTIEKI FSQENKSLDE KVLELKEFYK NS // ID E6VLF9_RHOPX Unreviewed; 87 AA. AC E6VLF9; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 01-MAY-2013, entry version 12. DE SubName: Full=Conjugal transfer protein TrbD; GN OrderedLocusNames=Rpdx1_0573; OS Rhodopseudomonas palustris (strain DX-1). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Rhodopseudomonas. OX NCBI_TaxID=652103; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DX-1; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., RA Pitluck S., Misra M., Chertkov O., Detter J.C., Han C., Tapia R., RA Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., RA Logan B., Oda Y., Harwood C., Woyke T.; RT "Complete sequence of Rhodopseudomonas palustris DX-1."; RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002418; ADU42212.1; -; Genomic_DNA. DR RefSeq; YP_004106945.1; NC_014834.1. DR EnsemblBacteria; ADU42212; ADU42212; Rpdx1_0573. DR GeneID; 10062767; -. DR KEGG; rpx:Rpdx1_0573; -. DR PATRIC; 45341355; VBIRhoPal82507_0591. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR BioCyc; RPAL652103:GHQR-581-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 87 AA; 9399 MW; 6D8F598826D7F51C CRC64; MDEPVTGFVV PVHRALTEPI LMGGAPRSVA IVNGTLAAAL GLGLRLWIAG LILWFIGHMA AVWAAKRDPA FVDVVRRHLR IPSHLNT // ID E6VP34_RHOPX Unreviewed; 92 AA. AC E6VP34; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 01-MAY-2013, entry version 12. DE SubName: Full=Conjugal transfer protein TrbB; GN OrderedLocusNames=Rpdx1_0848; OS Rhodopseudomonas palustris (strain DX-1). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Rhodopseudomonas. OX NCBI_TaxID=652103; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DX-1; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., RA Pitluck S., Misra M., Chertkov O., Detter J.C., Han C., Tapia R., RA Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., RA Logan B., Oda Y., Harwood C., Woyke T.; RT "Complete sequence of Rhodopseudomonas palustris DX-1."; RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002418; ADU42480.1; -; Genomic_DNA. DR RefSeq; YP_004107213.1; NC_014834.1. DR EnsemblBacteria; ADU42480; ADU42480; Rpdx1_0848. DR GeneID; 10063045; -. DR KEGG; rpx:Rpdx1_0848; -. DR PATRIC; 45341918; VBIRhoPal82507_0869. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR BioCyc; RPAL652103:GHQR-859-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 92 AA; 9845 MW; 703D1173E2C61835 CRC64; MAVAFEQLDV PGFTVPVHRA LTEHILLGGA PRSIAILNGT LAGAVGLGLR LWLVGLLIWA VGHFAAVWAA KRDPLFVEVG RRHLRIPGHL AV // ID E6VPJ5_RHOPX Unreviewed; 93 AA. AC E6VPJ5; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 29-MAY-2013, entry version 13. DE SubName: Full=Conjugal transfer protein TrbB; GN OrderedLocusNames=Rpdx1_3281; OS Rhodopseudomonas palustris (strain DX-1). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Rhodopseudomonas. OX NCBI_TaxID=652103; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DX-1; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., RA Pitluck S., Misra M., Chertkov O., Detter J.C., Han C., Tapia R., RA Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., RA Logan B., Oda Y., Harwood C., Woyke T.; RT "Complete sequence of Rhodopseudomonas palustris DX-1."; RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002418; ADU44855.1; -; Genomic_DNA. DR RefSeq; YP_004109588.1; NC_014834.1. DR EnsemblBacteria; ADU44855; ADU44855; Rpdx1_3281. DR GeneID; 10065510; -. DR KEGG; rpx:Rpdx1_3281; -. DR PATRIC; 45346933; VBIRhoPal82507_3322. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR BioCyc; RPAL652103:GHQR-3325-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9743 MW; 7EECFF34F4180BA4 CRC64; METQVGSQAV VAGFSIPVHR SLTEPILLGG APRAVAILNG TLAAALGLGL RLWVAGLLVW VIGHAAAVWA AKRDPLFVEV VRRHLRIPGH LAA // ID E6VPW9_RHOPX Unreviewed; 93 AA. AC E6VPW9; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 01-MAY-2013, entry version 12. DE SubName: Full=Type IV secretory pathway TrbD component; GN OrderedLocusNames=Rpdx1_0916; OS Rhodopseudomonas palustris (strain DX-1). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Rhodopseudomonas. OX NCBI_TaxID=652103; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DX-1; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., RA Pitluck S., Misra M., Chertkov O., Detter J.C., Han C., Tapia R., RA Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., RA Logan B., Oda Y., Harwood C., Woyke T.; RT "Complete sequence of Rhodopseudomonas palustris DX-1."; RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002418; ADU42546.1; -; Genomic_DNA. DR RefSeq; YP_004107279.1; NC_014834.1. DR EnsemblBacteria; ADU42546; ADU42546; Rpdx1_0916. DR GeneID; 10063113; -. DR KEGG; rpx:Rpdx1_0916; -. DR PATRIC; 45342043; VBIRhoPal82507_0931. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR BioCyc; RPAL652103:GHQR-927-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9726 MW; 7842E42A57A96D4F CRC64; MAAASEQGGE LLGFSVPVHR ALTEPILLGG APRAIAILNG TLAGAVGLGL RLWLVGIAIW AIGHIAAVWA AKRDPLFVEV GRRHLRIPPH LSV // ID E6YFX2_BARC7 Unreviewed; 102 AA. AC E6YFX2; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 22-JAN-2014, entry version 15. DE SubName: Full=Type IV secretion system protein VirB3; GN Name=virB3; OrderedLocusNames=BARCL_0079, BARCL_0620, BARCL_0649; OS Bartonella clarridgeiae (strain CIP 104772 / 73). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=696125; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=73, and CIP 104772 / 73; RA Engel P., Salzburger W., Marius L., Chao-Chin C., Soichi M., RA Christa L., Alexandra C., Aurelie L., Claudine M., Stephan S.C., RA Christoph D.; RT "Genome sequencing of Bartonella species and comparative genomics."; RL Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=73; RX PubMed=21347280; DOI=10.1371/journal.pgen.1001296; RA Engel P., Salzburger W., Liesch M., Chang C.C., Maruyama S., Lanz C., RA Calteau A., Lajus A., Medigue C., Schuster S.C., Dehio C.; RT "Parallel evolution of a type IV secretion system in radiating RT lineages of the host-restricted bacterial pathogen Bartonella."; RL PLoS Genet. 7:E1001296-E1001296(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FN645454; CBI75760.1; -; Genomic_DNA. DR EMBL; FN645454; CBI76301.1; -; Genomic_DNA. DR EMBL; FN645454; CBI76330.1; -; Genomic_DNA. DR EnsemblBacteria; CBI75760; CBI75760; BARCL_0079. DR EnsemblBacteria; CBI76301; CBI76301; BARCL_0620. DR EnsemblBacteria; CBI76330; CBI76330; BARCL_0649. DR HOGENOM; HOG000119151; -. DR OMA; HDHNMFR; -. DR BioCyc; BCLA696125:GC2L-639-MONOMER; -. DR BioCyc; BCLA696125:GC2L-668-MONOMER; -. DR BioCyc; BCLA696125:GC2L-79-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 102 AA; 11510 MW; 0E1B39BC496CBCC8 CRC64; MNEDTLFLAC TRPAMFAGVT VEAMALNVMA TSTLFIITSS FSMIGLGIGL HFILREITKR DHNQFRVLFA WLNTRGKQKN LTRWGGGSTS PLRLIRTYKE LN // ID E6YJU9_9RHIZ Unreviewed; 102 AA. AC E6YJU9; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 22-JAN-2014, entry version 6. DE SubName: Full=Type IV secretion system protein VirB3; GN Name=virB3; ORFNames=BARRO_10070, BARRO_50050, BARRO_50067; OS Bartonella rochalimae ATCC BAA-1498. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=685782; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC BAA-1498; RX PubMed=21347280; DOI=10.1371/journal.pgen.1001296; RA Engel P., Salzburger W., Liesch M., Chang C.C., Maruyama S., Lanz C., RA Calteau A., Lajus A., Medigue C., Schuster S.C., Dehio C.; RT "Parallel evolution of a type IV secretion system in radiating RT lineages of the host-restricted bacterial pathogen Bartonella."; RL PLoS Genet. 7:E1001296-E1001296(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FN645455; CBI77137.1; -; Genomic_DNA. DR EMBL; FN645459; CBI77701.1; -; Genomic_DNA. DR EMBL; FN645459; CBI77718.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 102 AA; 11496 MW; 9A7426BC496CABD1 CRC64; MNEDTLFLAC TRPAMFAGVT VEAMALNVMA TSTLFIITSS FSMIGLGVGL HFILREITKR DHNQFRVLFA WLNTRGKQKN LTRWGGGSTS PLRLVRTYKE LK // ID E6YKF1_9RHIZ Unreviewed; 75 AA. AC E6YKF1; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 22-JAN-2014, entry version 6. DE SubName: Full=Conjugal transfer protein trbD; GN ORFNames=BARRO_10272; OS Bartonella rochalimae ATCC BAA-1498. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=685782; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC BAA-1498; RX PubMed=21347280; DOI=10.1371/journal.pgen.1001296; RA Engel P., Salzburger W., Liesch M., Chang C.C., Maruyama S., Lanz C., RA Calteau A., Lajus A., Medigue C., Schuster S.C., Dehio C.; RT "Parallel evolution of a type IV secretion system in radiating RT lineages of the host-restricted bacterial pathogen Bartonella."; RL PLoS Genet. 7:E1001296-E1001296(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FN645455; CBI77339.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 75 AA; 8780 MW; 8FFBDF2EA3ED6498 CRC64; MLLSMLLTGI LIVSAMNIVA ASVGLCIWFI CLYVLRRMAK FDPILSRIYI RQLKYRRYYA PFSTPFRVAQ SVRPY // ID E6YNZ8_9RHIZ Unreviewed; 102 AA. AC E6YNZ8; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 22-JAN-2014, entry version 6. DE SubName: Full=Type IV secretion system protein VirB3; GN Name=virB3; ORFNames=BAR15_10072, BAR15_120212, BAR15_120239; OS Bartonella sp. AR 15-3. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=545617; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=AR 15-3; RX PubMed=21347280; DOI=10.1371/journal.pgen.1001296; RA Engel P., Salzburger W., Liesch M., Chang C.C., Maruyama S., Lanz C., RA Calteau A., Lajus A., Medigue C., Schuster S.C., Dehio C.; RT "Parallel evolution of a type IV secretion system in radiating RT lineages of the host-restricted bacterial pathogen Bartonella."; RL PLoS Genet. 7:E1001296-E1001296(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FN645468; CBI78586.1; -; Genomic_DNA. DR EMBL; FN645479; CBI79173.1; -; Genomic_DNA. DR EMBL; FN645479; CBI79200.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 102 AA; 11491 MW; 4C9137A84C7DBFC3 CRC64; MNEDTLFLAC TRPAMFAGVT VEAMALNVIA TSTLFIITSS FSMIGLGVGL HFILREITKR DHNQFRVLFA WLNTRGKQKN LTRWGGGSTS PLRLIRTYKE LQ // ID E6YTC1_9RHIZ Unreviewed; 102 AA. AC E6YTC1; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 22-JAN-2014, entry version 6. DE SubName: Full=Type IV secretion system protein VirB3; GN Name=virB3; ORFNames=B11C_10069, B11C_110373, B11C_110391; OS Bartonella sp. 1-1C. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=515256; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=1-1C; RX PubMed=21347280; DOI=10.1371/journal.pgen.1001296; RA Engel P., Salzburger W., Liesch M., Chang C.C., Maruyama S., Lanz C., RA Calteau A., Lajus A., Medigue C., Schuster S.C., Dehio C.; RT "Parallel evolution of a type IV secretion system in radiating RT lineages of the host-restricted bacterial pathogen Bartonella."; RL PLoS Genet. 7:E1001296-E1001296(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FN645486; CBI80109.1; -; Genomic_DNA. DR EMBL; FN645496; CBI80762.1; -; Genomic_DNA. DR EMBL; FN645496; CBI80780.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 102 AA; 11560 MW; C4AEB9241B3C9302 CRC64; MNEDTLFLAC TRPAMFAGVT IEAMALNVIA ISTLFIITSS FSMIGLGVGL HFILREITKR DHNQFRILFV WLNTRGKQKN LTRWGGGSTS PLRLIRTYKE LK // ID E6YU48_9RHIZ Unreviewed; 51 AA. AC E6YU48; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 22-JAN-2014, entry version 6. DE SubName: Full=Conjugal transfer protein trbD; GN ORFNames=B11C_100053; OS Bartonella sp. 1-1C. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=515256; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=1-1C; RX PubMed=21347280; DOI=10.1371/journal.pgen.1001296; RA Engel P., Salzburger W., Liesch M., Chang C.C., Maruyama S., Lanz C., RA Calteau A., Lajus A., Medigue C., Schuster S.C., Dehio C.; RT "Parallel evolution of a type IV secretion system in radiating RT lineages of the host-restricted bacterial pathogen Bartonella."; RL PLoS Genet. 7:E1001296-E1001296(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FN645495; CBI80386.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 51 AA; 5803 MW; 6A3E4B8812F9C16D CRC64; MLLSMLLTGI LIVSAMNIVA ASVGLCIWFI CLYVLRRMAK FDPILSRIYI R // ID E6Z0Q0_BARSR Unreviewed; 112 AA. AC E6Z0Q0; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 22-JAN-2014, entry version 7. DE SubName: Full=VbhB3 protein; GN Name=vbhB; ORFNames=B11C_100013; OS Bartonella schoenbuchensis (strain DSM 13525 / NCTC 13165 / R1). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=687861; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=R1; RX PubMed=21347280; DOI=10.1371/journal.pgen.1001296; RA Engel P., Salzburger W., Liesch M., Chang C.C., Maruyama S., Lanz C., RA Calteau A., Lajus A., Medigue C., Schuster S.C., Dehio C.; RT "Parallel evolution of a type IV secretion system in radiating RT lineages of the host-restricted bacterial pathogen Bartonella."; RL PLoS Genet. 7:E1001296-E1001296(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FN645515; CBI82688.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 112 AA; 12840 MW; 94B69370DFB911CA CRC64; MFKAMKECDQ LTEDTLFLAC TRPAMIAGVT VEAMGLNFMG TLIIFILAGN IFFMALGVTV HFIMKEIIKH DHNKFRVLIA WLQTRKFSRN AEQWGGSSIS PLRLIRNYEE LK // ID E6Z168_BARSR Unreviewed; 102 AA. AC E6Z168; DT 08-MAR-2011, integrated into UniProtKB/TrEMBL. DT 08-MAR-2011, sequence version 1. DT 22-JAN-2014, entry version 7. DE SubName: Full=Conjugal transfer protein trbD; GN Name=trbD; ORFNames=BARSC_190127; OS Bartonella schoenbuchensis (strain DSM 13525 / NCTC 13165 / R1). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=687861; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=R1; RX PubMed=21347280; DOI=10.1371/journal.pgen.1001296; RA Engel P., Salzburger W., Liesch M., Chang C.C., Maruyama S., Lanz C., RA Calteau A., Lajus A., Medigue C., Schuster S.C., Dehio C.; RT "Parallel evolution of a type IV secretion system in radiating RT lineages of the host-restricted bacterial pathogen Bartonella."; RL PLoS Genet. 7:E1001296-E1001296(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FN645524; CBI82856.1; -; Genomic_DNA. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 102 AA; 12048 MW; 4039526FA1DB0202 CRC64; MDEELRCTPI YRALYEPKLI MGAEREPVLI LTLLIGVFII SAMSIVATII GTCIWLIGLY VLRKMAKIDP MLFRVYIHYL RYQRYYPARS SPFRVARSKW PY // ID E7FJC5_9BURK Unreviewed; 90 AA. AC E7FJC5; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 22-JAN-2014, entry version 11. DE SubName: Full=Conjugal transfer protein; DE SubName: Full=Conjugal transfer protein TrbD; GN Name=trbD; ORFNames=C380_15995; OS Acidovorax sp. KKS102. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Acidovorax. OX NCBI_TaxID=358220; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=KKS102; RX PubMed=11459836; DOI=10.1074/jbc.M100302200; RA Ohtsubo Y., Delawary M., Kimbara K., Takagi M., Ohta A., Nagata Y.; RT "BphS, a key transcriptional regulator of bph genes involved in RT polychlorinated biphenyl/biphenyl degradation in Pseudomonas sp. RT KKS102."; RL J. Biol. Chem. 276:36146-36154(2001). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=KKS102; RX PubMed=16796688; DOI=10.1111/j.1365-2958.2006.05197.x; RA Ohtsubo Y., Goto H., Nagata Y., Kudo T., Tsuda M.; RT "Identification of a response regulator gene for catabolite control RT from a PCB-degrading beta-proteobacteria, Acidovorax sp. KKS102."; RL Mol. Microbiol. 60:1563-1575(2006). RN [3] RP NUCLEOTIDE SEQUENCE. RC STRAIN=KKS102; RA Ohtsubo Y., Ishibashi Y., Naganawa H., Hirokawa S., Atobe S., RA And Y.N., Tsuda M.; RT "Conjugal Transfer of Polychlorinated Biphenyl/Biphenyl Degradation RT Genes in Acidovorax sp. Strain KKS102, Which Are Located on an RT Integrative and Conjugative Element."; RL J. Bacteriol. 194:4237-4248(2012). RN [4] RP NUCLEOTIDE SEQUENCE. RC STRAIN=KKS102; RX PubMed=23209225; DOI=10.1128/JB.01848-12; RA Ohtsubo Y., Maruyama F., Mitsui H., Nagata Y., Tsuda M.; RT "Complete Genome Sequence of Acidovorax sp. Strain KKS102, a RT Polychlorinated-Biphenyl Degrader."; RL J. Bacteriol. 194:6970-6971(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003872; AFU46894.1; -; Genomic_DNA. DR EMBL; AB546270; BAJ72258.1; -; Genomic_DNA. DR RefSeq; YP_006855532.1; NC_018708.1. DR EnsemblBacteria; AFU46894; AFU46894; C380_15995. DR GeneID; 13786727; -. DR KEGG; ack:C380_15995; -. DR KO; K03198; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 90 AA; 9663 MW; D390675A3C91674E CRC64; MSAPDTFADG FEVPLHRSLT EPILLGGAPR TVAIANGTLA AAVGLGLQLW IPGVVFWIVG HSLAVWGARV DPQFMAVFAR HIRHRPLLDV // ID E7H2H9_9BURK Unreviewed; 84 AA. AC E7H2H9; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 19-MAR-2014, entry version 6. DE SubName: Full=Uncharacterized protein; GN ORFNames=HMPREF9464_00917; OS Sutterella wadsworthensis 3_1_45B. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Sutterellaceae; Sutterella. OX NCBI_TaxID=742821; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=3_1_45B; RG The Broad Institute Genome Sequencing Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Daigneault M., Strauss J., RA Allen-Vercoe E., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., RA Haas B., Abouelleil A., Alvarado L., Arachchi H.M., Berlin A., RA Brown A., Chapman S.B., Chen Z., Dunbar C., Freedman E., Gearin G., RA Gellesch M., Goldberg J., Griggs A., Gujja S., Heilman E., Heiman D., RA Howarth C., Larson L., Lui A., MacDonald P.J.P., Mehta T., RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA White J., Yandava C., Nusbaum C., Birren B.; RT "The Genome Sequence of Sutterella wadsworthensis strain 3_1_45B."; RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADMF01000017; EFW01957.1; -; Genomic_DNA. DR EnsemblBacteria; EFW01957; EFW01957; HMPREF9464_00917. DR PATRIC; 46497321; VBISutWad150710_0993. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 84 AA; 9646 MW; 6B70473CC1AB5E59 CRC64; MGIPIKPFVA VCGLGLLLGF WLWMPLILLV PVALRIMSQI TAKDDQAFRQ LWISWQTRHV GQLNKRLWGS VASLAPTDYK RKER // ID E7TGY2_SHIFL Unreviewed; 915 AA. AC E7TGY2; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 16-APR-2014, entry version 7. DE SubName: Full=Uncharacterized protein; GN ORFNames=SGF_03903; OS Shigella flexneri CDC 796-83. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Shigella. OX NCBI_TaxID=945360; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=CDC 796-83; RA Mane S.P., Sobral B.W., Cebula T., Chertkov O., Munk A.C., Tapia R., RA Green L., Rogers Y., Detter J.C., Bruce D., Brettin T.S.; RT "Shigella flexneri CDC 796-83 whole genome shotgun sequencing RT project."; RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AERO01000154; EFW58764.1; -; Genomic_DNA. DR EnsemblBacteria; EFW58764; EFW58764; SGF_03903. DR PATRIC; 47329749; VBIAERShi177170_3906. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 915 AA; 103839 MW; D90B7D0088E53A02 CRC64; MSTLYKAMTR PAMYVGVPVV PLTVVAGALF LAGVYISKLI WLAIPVAVFV LRMITKQDDH IFNLYFLKLK MLGNSVCNRF FGARAFLSGQ YEAVEIDEFV NAMKLNERIT TGKYIPYSSH VDKNIVKTKN GDYVATWQLM GINFESISAE MLETIDSQVA TLVRSFSGLP VSFYNHSCRA SFYDAFTTKS GNKYADIISD CYYGSMKKNK FKGNTLYFTL IYRPDGRVEK LEKRKKSIKE KKDDINIHVK RMNEMINTFS GALDKFTCKL LGMYEENGKV FSSQLSFYNY LLTGKLQKIR VTDSPVYNVL GGVDVFFNHD TGQICRIDGN KFFRSIEIKD FCSETASGVF DVLQYSDADY IITHSYTSMS KSEALSTIKR AEKQLKSTED DAVTQLQELE KAKNDIVSGD ISFGYYHFTL MVMADSIREL DESVSKITAD FTDLGIIPAL STMSLPAAYF AQLPAVFHLR PRLSPVSNVN FVELASFHNF YQGKRDKNCW TEAVAILKTP SKQAYYLNLH NSVLFKDETG EKNLANTKVI GTAGSGKTMF LSYLACSLQK YNNPETFADS AKNKKLTCVF LDKDRGAELC IRMLGGEYYT VKSGEPTGWN PFALEATKRN RIFVKQLMEI LCTRNGERLS TRERLLISES VDAVMDFPPG EMREYGITRM LEHLMQRDDR DEQENGIILR LSQWANGQAH GWVFDNAKDT FNIQHVNNFG IDGTEFLDDP MVCAPITFYL LYRITQLLDG RRLVIFLDEF WKWLQDEAFS DFVYNKLKTI RKLNGLVIPA TQSPDEILKN KISRAVVEVC STSIYLANPD ADYNDYVEGL KLTPEEFNIV KNLDPMSRQF LIKKSSLKKG DGKSFSALAT LDLSGLGGYL KILSASADNL EIFESIYHEG MEPDDWVPEY LERAI // ID E8LKG9_9GAMM Unreviewed; 97 AA. AC E8LKG9; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=HMPREF9444_01209; OS Succinatimonas hippei YIT 12066. OC Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; OC Succinivibrionaceae; Succinatimonas. OX NCBI_TaxID=762983; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=YIT 12066; RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., RA Courtney L., Fronick C., Harrison M., Strong C., Farmer C., RA Delahaunty K., Markovic C., Hall O., Minx P., Tomlinson C., RA Mitreva M., Hou S., Chen J., Wollam A., Pepin K.H., Johnson M., RA Bhonagiri V., Zhang X., Suruliraj S., Warren W., Chinwalla A., RA Mardis E.R., Wilson R.K.; RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEVO01000061; EFY06956.1; -; Genomic_DNA. DR EnsemblBacteria; EFY06956; EFY06956; HMPREF9444_01209. DR PATRIC; 46689710; VBISucHip160816_1129. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 97 AA; 11157 MW; 8953B020909FF957 CRC64; MNRHQIYKAL IQKQTFLGCE RSLCMFLILI CIALVLSSAD ILVSLMSGCL FICGFYLLRI MSEHDLMLSK VYLKQLKYAA FYLAQGRNLN NGGWKKK // ID E8PSD2_YERPE Unreviewed; 104 AA. AC E8PSD2; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 13-NOV-2013, entry version 5. DE SubName: Full=Conjugal transfer protein TraD; GN ORFNames=YPJ_pJARS368; OS Yersinia pestis Java 9. OG Plasmid pJARS36. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Yersinia. OX NCBI_TaxID=880632; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Java 9; PLASMID=pJARS36; RX PubMed=22479347; DOI=10.1371/journal.pone.0032911; RA Eppinger M., Radnedge L., Andersen G., Vietri N., Severson G., Mou S., RA Ravel J., Worsham P.L.; RT "Novel Plasmids and Resistance Phenotypes in Yersinia pestis: Unique RT Plasmid Inventory of Strain Java 9 Mediates High Levels of Arsenic RT Resistance."; RL PLoS ONE 7:E32911-E32911(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002181; ADW66932.1; -; Genomic_DNA. DR RefSeq; YP_004221695.1; NC_015068.1. DR GeneID; 10216482; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 104 AA; 11614 MW; 2E6FF30F21C7DBB8 CRC64; MFVNTDHELK TEYLTYNGFN RPALFVGIPL IPFIIGLTLL LVTFFIGVLV FGFYGLILPS LIIAVLFSIK QMCADDPNAM ELKSIQFKGL AQKGFRAANI LKVE // ID E8RML8_ASTEC Unreviewed; 110 AA. AC E8RML8; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 03-APR-2013, entry version 12. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Astex_2243; OS Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / OS CB 48). OC Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; OC Caulobacteraceae; Asticcacaulis. OX NCBI_TaxID=573065; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., RA Pitluck S., Teshima H., Davenport K., Detter J.C., Han C., Tapia R., RA Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., RA Ovchinnikova G., Brun Y.V., Woyke T.; RT "Complete sequence of chromosome 1 of Asticcacaulis excentricus CB RT 48."; RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002395; ADU13899.1; -; Genomic_DNA. DR RefSeq; YP_004088050.1; NC_014816.1. DR EnsemblBacteria; ADU13899; ADU13899; Astex_2243. DR GeneID; 10053819; -. DR KEGG; aex:Astex_2243; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR BioCyc; AEXC573065:GJ7A-2270-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 110 AA; 12919 MW; 9CB84D2E1287759B CRC64; MEGFRDPFFR GCTRPPMFLG VPLSVFLVFA AILLIPAMWA FAFRFAPLAI ALCVCWVIGH LYMRQVTRKD DQRVLQWMLR LRVRRAHAPF RRHWGTASFG PLSYQRQGYD // ID E8RP36_ASTEC Unreviewed; 98 AA. AC E8RP36; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 03-APR-2013, entry version 13. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Astex_1334; OS Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / OS CB 48). OC Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; OC Caulobacteraceae; Asticcacaulis. OX NCBI_TaxID=573065; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., RA Pitluck S., Teshima H., Davenport K., Detter J.C., Han C., Tapia R., RA Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., RA Ovchinnikova G., Brun Y.V., Woyke T.; RT "Complete sequence of chromosome 1 of Asticcacaulis excentricus CB RT 48."; RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002395; ADU13006.1; -; Genomic_DNA. DR RefSeq; YP_004087157.1; NC_014816.1. DR EnsemblBacteria; ADU13006; ADU13006; Astex_1334. DR GeneID; 10052900; -. DR KEGG; aex:Astex_1334; -. DR PATRIC; 45150627; VBIAstExc23432_1307. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR BioCyc; AEXC573065:GJ7A-1351-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 98 AA; 11477 MW; 77604E1921BC0D76 CRC64; MSEETVALVK APIFRALTQP QMFAGVTYSY FILNFMITTE AFLVTRSFWA LGIALLVHAV GYLACLREPR LFDLWFTKVS RTPRIRNYKF WRCNSYLP // ID E8RS38_ASTEC Unreviewed; 87 AA. AC E8RS38; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 03-APR-2013, entry version 12. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Astex_2667; OS Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / OS CB 48). OC Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; OC Caulobacteraceae; Asticcacaulis. OX NCBI_TaxID=573065; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., RA Pitluck S., Teshima H., Davenport K., Detter J.C., Han C., Tapia R., RA Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., RA Ovchinnikova G., Brun Y.V., Woyke T.; RT "Complete sequence of chromosome 2 of Asticcacaulis excentricus CB RT 48."; RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002396; ADU14309.1; -; Genomic_DNA. DR RefSeq; YP_004088460.1; NC_014817.1. DR EnsemblBacteria; ADU14309; ADU14309; Astex_2667. DR GeneID; 10054254; -. DR KEGG; aex:Astex_2667; -. DR PATRIC; 45153269; VBIAstExc23432_2607. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR BioCyc; AEXC573065:GJ7A-2704-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 87 AA; 9306 MW; CA800BB94FC7E2C2 CRC64; MDTAVEGYEV PLHQALTQPL LLGGAPRGLA LLNGTLAAAL GLGLHMWLPA LVLWVTGHTL AVFAAKHDPH CVTVTLRHLR LKGYFSC // ID E8RUT4_ASTEC Unreviewed; 87 AA. AC E8RUT4; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 03-APR-2013, entry version 12. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Astex_2483; OS Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / OS CB 48). OC Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; OC Caulobacteraceae; Asticcacaulis. OX NCBI_TaxID=573065; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., RA Pitluck S., Teshima H., Davenport K., Detter J.C., Han C., Tapia R., RA Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., RA Ovchinnikova G., Brun Y.V., Woyke T.; RT "Complete sequence of chromosome 2 of Asticcacaulis excentricus CB RT 48."; RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002396; ADU14134.1; -; Genomic_DNA. DR RefSeq; YP_004088285.1; NC_014817.1. DR EnsemblBacteria; ADU14134; ADU14134; Astex_2483. DR GeneID; 10054061; -. DR KEGG; aex:Astex_2483; -. DR PATRIC; 45152890; VBIAstExc23432_2427. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR BioCyc; AEXC573065:GJ7A-2511-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 87 AA; 9336 MW; 02F9426371335324 CRC64; MASRVEGFDV PLHLSLTQPL LLGGAPRTLA IANGTVAAAL GLGLQMWLPG LGLWLIGHTL AVFAARYDPD FVPVLLRHLR QKGYFAC // ID E8SRX6_NEIGO Unreviewed; 80 AA. AC E8SRX6; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 22-JAN-2014, entry version 9. DE SubName: Full=TrbD; GN ORFNames=NGTW08_p0030; OS Neisseria gonorrhoeae TCDC-NG08107. OG Plasmid pNGTCDC08107. OC Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; OC Neisseriaceae; Neisseria. OX NCBI_TaxID=940296; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=TCDC-NG08107; PLASMID=pNGTCDC08107; RA Chen C.-C., Hsia K.-C., Huang C.-T., Wong W.-W., Yen M.-Y., Li L.-H., RA Lin K.-Y., Chen K.-W., Li S.-Y.; RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=TCDC-NG08107; PLASMID=pNGTCDC08107; RX PubMed=21257765; DOI=10.1128/JB.00007-11; RA Chen C.C., Hsia K.C., Huang C.T., Wong W.W., Yen M.Y., Li L.H., RA Lin K.Y., Chen K.W., Li S.Y.; RT "Draft genome sequence of a dominant, multidrug-resistant Neisseria RT gonorrhoeae strain, TCDC-NG08107, from a sexual group at high risk of RT acquiring human immunodeficiency virus infection and syphilis."; RL J. Bacteriol. 193:1788-1789(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002441; ADV09160.1; -; Genomic_DNA. DR RefSeq; YP_005888827.1; NC_017510.1. DR EnsemblBacteria; ADV09160; ADV09160; NGTW08_p0030. DR GeneID; 12355116; -. DR KEGG; ngt:NGTW08_p0030; -. DR KO; K03198; -. DR BioCyc; NGON940296:GLHN-2239-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 80 AA; 9368 MW; A30361F7771643FB CRC64; MVQVSLLITF VLVVAAQNTY AFVIGLVFWF FALYALRKLA KYDPLLRFVG LRSITKYKRF YPPHSTPFRN NTSTQGNRYK // ID E8TFF4_MESCW Unreviewed; 90 AA. AC E8TFF4; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 14-MAY-2014, entry version 18. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Mesci_5520; OS Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / OS WSM1271). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Phyllobacteriaceae; Mesorhizobium. OX NCBI_TaxID=765698; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=HAMBI 2942 / LMG 23838 / WSM1271; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., RA Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., RA Hauser L., Kyrpides N., Ivanova N., Nandasena K., Reeve W.G., RA Howieson J.G., O'Hara G., Tiwari R.P., Woyke T.; RT "Complete sequence of chromosome of Mesorhizobium ciceri bv. RT biserrulae WSM1271."; RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002447; ADV14617.1; -; Genomic_DNA. DR RefSeq; YP_004144667.1; NC_014923.1. DR EnsemblBacteria; ADV14617; ADV14617; Mesci_5520. DR GeneID; 10121020; -. DR KEGG; mci:Mesci_5520; -. DR PATRIC; 45261288; VBIMesCic160642_6053. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; AVWATKR; -. DR BioCyc; MCIC765698:GHQ5-5582-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 90 AA; 9704 MW; 3D661814AECBCEAF CRC64; MFAREHHIEG FEVPVHRALT EPILLGGAPR AVAILSGTVA AAVGLGLQQW IAGLVLWTCA HTVAVFAARR DPDFASVLVR HLRLKGWLAC // ID E8TGH9_MESCW Unreviewed; 108 AA. AC E8TGH9; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 29-MAY-2013, entry version 16. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Mesci_5598; OS Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / OS WSM1271). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Phyllobacteriaceae; Mesorhizobium. OX NCBI_TaxID=765698; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=HAMBI 2942 / LMG 23838 / WSM1271; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., RA Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., RA Hauser L., Kyrpides N., Ivanova N., Nandasena K., Reeve W.G., RA Howieson J.G., O'Hara G., Tiwari R.P., Woyke T.; RT "Complete sequence of chromosome of Mesorhizobium ciceri bv. RT biserrulae WSM1271."; RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002447; ADV14692.1; -; Genomic_DNA. DR RefSeq; YP_004144742.1; NC_014923.1. DR EnsemblBacteria; ADV14692; ADV14692; Mesci_5598. DR GeneID; 10121098; -. DR KEGG; mci:Mesci_5598; -. DR PATRIC; 45261428; VBIMesCic160642_6121. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; RDYNAAS; -. DR BioCyc; MCIC765698:GHQ5-5660-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 108 AA; 11574 MW; 4A308AF1412524E3 CRC64; MSDRLEVSTL YVAATRPALF LGVPLTLAGA LMMLAGLVII ILKNPLYEVV LVPLWFGARL IVERDYNAAS VAFLYLQTAG RSVDGSVWGG ASVSANPIRV PKRGRGMV // ID E8TT31_ALIDB Unreviewed; 90 AA. AC E8TT31; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 19-FEB-2014, entry version 16. DE SubName: Full=Putative conjugal transfer TrbD transmembrane protein; GN OrderedLocusNames=Alide_0215; OS Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Alicycliphilus. OX NCBI_TaxID=596153; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=JCM 14587 / BC; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., RA Pitluck S., Daligault H., Detter J.C., Han C., Tapia R., Land M., RA Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Oosterkamp M.J., RA Veuskens T., Weelink S.A., Plugge C.M., Stams A.J.M., Woyke T.; RT "Complete sequence of chromosome of Alicycliphilus denitrificans BC."; RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002449; ADU97998.1; -; Genomic_DNA. DR RefSeq; YP_004124886.1; NC_014910.1. DR EnsemblBacteria; ADU97998; ADU97998; Alide_0215. DR GeneID; 10102238; -. DR KEGG; adn:Alide_0215; -. DR PATRIC; 45139161; VBIAliDen149934_0316. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR BioCyc; ADEN596153:GHGY-215-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 90 AA; 9622 MW; FC62742EFD3BC656 CRC64; MNGPHDGMPG FEVPLHRSLT EPILMGGAPR TVAITNGTLA AAVGLGLQLW IPGVVLWIAG HSLAVWGARV DPQFMAVFAR HIKHRPLLDV // ID E8TV32_ALIDB Unreviewed; 90 AA. AC E8TV32; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 19-FEB-2014, entry version 16. DE SubName: Full=Putative conjugal transfer TrbD transmembrane protein; GN OrderedLocusNames=Alide_2833; OS Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Alicycliphilus. OX NCBI_TaxID=596153; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=JCM 14587 / BC; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., RA Pitluck S., Daligault H., Detter J.C., Han C., Tapia R., Land M., RA Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Oosterkamp M.J., RA Veuskens T., Weelink S.A., Plugge C.M., Stams A.J.M., Woyke T.; RT "Complete sequence of chromosome of Alicycliphilus denitrificans BC."; RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002449; ADV00564.1; -; Genomic_DNA. DR RefSeq; YP_004127451.1; NC_014910.1. DR EnsemblBacteria; ADV00564; ADV00564; Alide_2833. DR GeneID; 10104893; -. DR KEGG; adn:Alide_2833; -. DR PATRIC; 45144516; VBIAliDen149934_2938. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR BioCyc; ADEN596153:GHGY-2871-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 90 AA; 9505 MW; 5890B9346E75B1ED CRC64; MSGPDTFAAG FEVPLHRSLT EPILLGGAPR TVAIANGTLA AAVGLGLQLW IPGVVLWIVG HSLAVWGARV DPQFMAVFAR HIKHQSLLDV // ID E8U2T1_ALIDB Unreviewed; 103 AA. AC E8U2T1; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 11-DEC-2013, entry version 14. DE SubName: Full=Conjugal transfer protein TrbD; GN OrderedLocusNames=Alide_4475; OS Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC). OG Plasmid pALIDE02. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Alicycliphilus. OX NCBI_TaxID=596153; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=JCM 14587 / BC; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., RA Pitluck S., Daligault H., Detter J.C., Han C., Tapia R., Land M., RA Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Oosterkamp M.J., RA Veuskens T., Weelink S.A., Plugge C.M., Stams A.J.M., Woyke T.; RT "Complete sequence of plasmid2 of Alicycliphilus denitrificans BC."; RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002451; ADV02292.1; -; Genomic_DNA. DR RefSeq; YP_004129054.1; NC_014911.1. DR EnsemblBacteria; ADV02292; ADV02292; Alide_4475. DR GeneID; 10106563; -. DR KEGG; adn:Alide_4475; -. DR PATRIC; 45147900; VBIAliDen149934_4589. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR BioCyc; ADEN596153:GHGY-4671-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 103 AA; 11802 MW; 8F4CEDEE6B161847 CRC64; MALRAIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QEVRATVFGI ALWFGALFAL RLMAKADPKL RHVYLRHRRY KPYYPARSTP FRDNTPSQGK QYK // ID E8UYN2_TERSS Unreviewed; 87 AA. AC E8UYN2; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 19-MAR-2014, entry version 12. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=AciPR4_2405; OS Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4). OC Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; OC Terriglobus. OX NCBI_TaxID=401053; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC BAA-1853 / DSM 23119 / SP1PR4; RX PubMed=23450133; DOI=10.4056/sigs.3036810; RA Rawat S.R., Mannisto M.K., Starovoytov V., Goodwin L., Nolan M., RA Hauser L., Land M., Davenport K.W., Woyke T., Haggblom M.M.; RT "Complete genome sequence of Terriglobus saanensis type strain RT SP1PR4(T), an Acidobacteria from tundra soil."; RL Stand. Genomic Sci. 7:59-69(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002467; ADV83185.1; -; Genomic_DNA. DR RefSeq; YP_004183179.1; NC_014963.1. DR EnsemblBacteria; ADV83185; ADV83185; AciPR4_2405. DR GeneID; 10160320; -. DR KEGG; tsa:AciPR4_2405; -. DR PATRIC; 46830610; VBITerSaa54836_2501. DR HOGENOM; HOG000100485; -. DR BioCyc; TSAA401053:GHYY-2430-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 87 AA; 10063 MW; 7DDC804E2282ADCE CRC64; MTKRGEPLPI NQAMNRPRAK LGLDLTAWMA IVFVCVTVFL VGFRFLAMMA FPTLAIAAWL IVRKHPKMFQ LWGLSLSQKS YYDPRKY // ID E8V1A9_TERSS Unreviewed; 87 AA. AC E8V1A9; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 19-MAR-2014, entry version 12. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=AciPR4_3775; OS Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4). OC Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; OC Terriglobus. OX NCBI_TaxID=401053; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC BAA-1853 / DSM 23119 / SP1PR4; RX PubMed=23450133; DOI=10.4056/sigs.3036810; RA Rawat S.R., Mannisto M.K., Starovoytov V., Goodwin L., Nolan M., RA Hauser L., Land M., Davenport K.W., Woyke T., Haggblom M.M.; RT "Complete genome sequence of Terriglobus saanensis type strain RT SP1PR4(T), an Acidobacteria from tundra soil."; RL Stand. Genomic Sci. 7:59-69(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002467; ADV84524.1; -; Genomic_DNA. DR RefSeq; YP_004184518.1; NC_014963.1. DR EnsemblBacteria; ADV84524; ADV84524; AciPR4_3775. DR GeneID; 10161716; -. DR KEGG; tsa:AciPR4_3775; -. DR PATRIC; 46833490; VBITerSaa54836_3914. DR HOGENOM; HOG000100485; -. DR BioCyc; TSAA401053:GHYY-3826-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 87 AA; 10072 MW; 6A4FBF8E2DE0203B CRC64; MTKRGEPLPI NQAMNRPRAK LGLDLSTWMA IVFVNVTVFL VGFRLLAMIS FPTMAVGAWL IVRRHPKMFQ LWGLSLIQKS YYDPRKH // ID E8V529_TERSS Unreviewed; 87 AA. AC E8V529; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 19-MAR-2014, entry version 12. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=AciPR4_2956; OS Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4). OC Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; OC Terriglobus. OX NCBI_TaxID=401053; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC BAA-1853 / DSM 23119 / SP1PR4; RX PubMed=23450133; DOI=10.4056/sigs.3036810; RA Rawat S.R., Mannisto M.K., Starovoytov V., Goodwin L., Nolan M., RA Hauser L., Land M., Davenport K.W., Woyke T., Haggblom M.M.; RT "Complete genome sequence of Terriglobus saanensis type strain RT SP1PR4(T), an Acidobacteria from tundra soil."; RL Stand. Genomic Sci. 7:59-69(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002467; ADV83716.1; -; Genomic_DNA. DR RefSeq; YP_004183710.1; NC_014963.1. DR EnsemblBacteria; ADV83716; ADV83716; AciPR4_2956. DR GeneID; 10160878; -. DR KEGG; tsa:AciPR4_2956; -. DR PATRIC; 46831768; VBITerSaa54836_3071. DR HOGENOM; HOG000100485; -. DR BioCyc; TSAA401053:GHYY-2988-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 87 AA; 10061 MW; 64E0718609CB0C59 CRC64; MTRRGEPQAI NQALNRPRAK LGLDLTAWMA IVFVCVAVFL VGFRLLAMMA FPTLAFGAWL IIRKHPKMFQ LWGLSLNQRS YYDPRKH // ID E8WWA9_ACISM Unreviewed; 87 AA. AC E8WWA9; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 01-MAY-2013, entry version 13. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=AciX9_1435; OS Acidobacterium sp. (strain MP5ACTX9). OC Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; OC Acidobacterium. OX NCBI_TaxID=696844; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MP5ACTX9; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., RA Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., RA Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., RA Rawat S.R., Mannisto M., Haggblom M.M., Woyke T.; RT "Complete sequence of chromosome of Acidobacterium sp. MP5ACTX9."; RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002480; ADW68492.1; -; Genomic_DNA. DR RefSeq; YP_004217272.1; NC_015064.1. DR EnsemblBacteria; ADW68492; ADW68492; AciX9_1435. DR GeneID; 10203426; -. DR KEGG; acm:AciX9_1435; -. DR PATRIC; 46820403; VBIAciSp155132_2111. DR HOGENOM; HOG000100485; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 87 AA; 9941 MW; 79E3056E0942B951 CRC64; MTKRGEPLPI NQALNRPRAK LGLDLSAWMA IVFVTVTVFL VGFRMLAILS FPMMAGGAWL IVRKHPKMFQ LWGLSLGQKS YYDPRKY // ID E8X1G6_ACISM Unreviewed; 87 AA. AC E8X1G6; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 01-MAY-2013, entry version 13. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=AciX9_3190; OS Acidobacterium sp. (strain MP5ACTX9). OC Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; OC Acidobacterium. OX NCBI_TaxID=696844; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MP5ACTX9; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., RA Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., RA Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., RA Rawat S.R., Mannisto M., Haggblom M.M., Woyke T.; RT "Complete sequence of chromosome of Acidobacterium sp. MP5ACTX9."; RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002480; ADW70201.1; -; Genomic_DNA. DR RefSeq; YP_004218981.1; NC_015064.1. DR EnsemblBacteria; ADW70201; ADW70201; AciX9_3190. DR GeneID; 10205203; -. DR KEGG; acm:AciX9_3190; -. DR PATRIC; 46823920; VBIAciSp155132_3843. DR HOGENOM; HOG000100485; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 87 AA; 9948 MW; 22960D352F2DB110 CRC64; MARRGEPSPI NQALNRPRAK LGLDLSAWMA IVFVCVTVFL VGFRLLAMLA FPTLAVCAWL IVRKHPKMFQ LWGLSLNQKS YYDPRKD // ID E8X7F5_ACISM Unreviewed; 87 AA. AC E8X7F5; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 01-MAY-2013, entry version 12. DE SubName: Full=Transporter, type IV (Conjugal DNA-protein transfer or VirB) secretory pathway (IVSP) family; GN OrderedLocusNames=AciX9_4443; OS Acidobacterium sp. (strain MP5ACTX9). OG Plasmid pACIX903. OC Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; OC Acidobacterium. OX NCBI_TaxID=696844; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MP5ACTX9; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., RA Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., RA Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., RA Rawat S.R., Mannisto M., Haggblom M.M., Woyke T.; RT "Complete sequence of plasmid3 of Acidobacterium sp. MP5ACTX9."; RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002483; ADW71389.1; -; Genomic_DNA. DR RefSeq; YP_004210516.1; NC_015058.1. DR EnsemblBacteria; ADW71389; ADW71389; AciX9_4443. DR GeneID; 10206229; -. DR KEGG; acm:AciX9_4443; -. DR HOGENOM; HOG000100485; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 87 AA; 9924 MW; 4A84A94101F3B95B CRC64; MTRRGEPLPI NQAMNRSRAK LGLELPTWMA IAFVSIVVFL AGFRFTAILT FPTLVLGAWL TVRTHPKMFQ IWGLSLGQKA YYDPRKD // ID E8X7Y1_ACISM Unreviewed; 88 AA. AC E8X7Y1; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 01-MAY-2013, entry version 13. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=AciX9_4635; OS Acidobacterium sp. (strain MP5ACTX9). OG Plasmid pACIX905. OC Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; OC Acidobacterium. OX NCBI_TaxID=696844; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MP5ACTX9; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., RA Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., RA Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., RA Rawat S.R., Mannisto M., Haggblom M.M., Woyke T.; RT "Complete sequence of plasmid5 of Acidobacterium sp. MP5ACTX9."; RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002485; ADW71565.1; -; Genomic_DNA. DR RefSeq; YP_004210692.1; NC_015060.1. DR EnsemblBacteria; ADW71565; ADW71565; AciX9_4635. DR GeneID; 10206621; -. DR KEGG; acm:AciX9_4635; -. DR PATRIC; 46817335; VBIAciSp155132_0600. DR HOGENOM; HOG000100485; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 88 AA; 10122 MW; E1E168E7F5163CBB CRC64; MTKRGEALPI NQAMNRSRTK LGLELSAWMA IVFVSVSVFL VGFRMLAVIS FPLLVAAAWF TVRNHPKMFQ LWGHSLYQKS YYDPRKSD // ID E8YFU8_9BURK Unreviewed; 118 AA. AC E8YFU8; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 22-JAN-2014, entry version 10. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN ORFNames=BC1001_1959; OS Burkholderia sp. CCGE1001. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia. OX NCBI_TaxID=640510; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=CCGE1001; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., RA Pitluck S., Chertkov O., Saunders E., Detter J.C., Han C., Tapia R., RA Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., RA Martinez-Romero E., Rogel M.A., Auchtung J., Tiedje J., Woyke T.; RT "Complete sequence of chromosome1 of Burkholderia sp. CCGE1001."; RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002519; ADX55388.1; -; Genomic_DNA. DR RefSeq; YP_004228448.1; NC_015136.1. DR EnsemblBacteria; ADX55388; ADX55388; BC1001_1959. DR GeneID; 10223505; -. DR KEGG; bug:BC1001_1959; -. DR PATRIC; 46896572; VBIBurSp1058_2032. DR KO; K03198; -. DR BioCyc; BSP640510:GI28-1982-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 118 AA; 13635 MW; 78BEB43A13599274 CRC64; MVTQDADHRD AADEPDDPLA ARIRKTMLEQ FLLLGIDRRW CIAEVAIVIT FAAGMRNAWV LLAVLVTHPV LWLAVRRDPD QIRCYTRYSR QGDYYEPRQL LRQKVNARPK GFARGLPC // ID E9CQ79_9ENTR Unreviewed; 365 AA. AC E9CQ79; DT 05-APR-2011, integrated into UniProtKB/TrEMBL. DT 05-APR-2011, sequence version 1. DT 31-MAY-2011, entry version 2. DE SubName: Full=Putative TriC conjugal transfer protein; DE Flags: Fragment; GN Name=triC; ORFNames=SSYM_0037; OS Serratia symbiotica str. Tucson. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Serratia; Serratia symbiotica. OX NCBI_TaxID=914128; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Tucson; RA Burke G.R., Moran N.A.; RT "Massive genomic decay in Serratia symbiotica, a recently evolved RT symbiont of aphids."; RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL636160; EFW11292.1; -; Genomic_DNA. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; FT NON_TER 365 365 SQ SEQUENCE 365 AA; 42841 MW; 080EBA6EDA11E4DA CRC64; MATVYKALTR PTLLQWVPIA PFIISVFCLI ILGLIITKWM WLLILVLYFL LRNMTARDEH VFTLIWVGWK ALGKKSKLIS RHVVNRFFGE RAISHTHYDN IDMREFLANM KLNQRQPIEE FIPYSTHIHP HICKTRWTDY VATWELSGEA FQCQTIDVLE MLSQQVNKAL VSFSGESVTF YVHTIREKYT DCFDSVSGNK VADKVMSLYY RKMEKNPFYR TRIFFTLCYI PFTREEKMER KAKGLSFQKK TQDEAIIRMN ELRETVEGIL RHYRPQPLGL VEEGKKVFST QLRFFNYLMT GQWQKISVGN VPFYDVLGSA ELYFSSDSGQ INPFDRTRYF RCIEIKSLPG DIDTGALDGL LFEDV // ID E9T8M6_ECOLX Unreviewed; 473 AA. AC E9T8M6; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=CagE, TrbE, VirB family, component of type IV transporter system; DE Flags: Fragment; GN ORFNames=HMPREF9542_00104; OS Escherichia coli MS 117-3. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=749539; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MS 117-3; RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., RA Courtney L., Fronick C., Harrison M., Strong C., Farmer C., RA Delahaunty K., Markovic C., Hall O., Minx P., Tomlinson C., RA Mitreva M., Hou S., Chen J., Wollam A., Pepin K.H., Johnson M., RA Bhonagiri V., Zhang X., Suruliraj S., Warren W., Chinwalla A., RA Mardis E.R., Wilson R.K.; RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADTS01000007; EGB90402.1; -; Genomic_DNA. DR EnsemblBacteria; EGB90402; EGB90402; HMPREF9542_00104. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; FT NON_TER 473 473 SQ SEQUENCE 473 AA; 53520 MW; D93C3DFA486D2FDD CRC64; MSTLYKAMTR PAMYVGVPVV PLTVVAGALF LAGVYISKLI WLAIPVAVFI LRMITKQDDH IFNLYFLKLK MLGNSVCNRF FGARAFLSGQ YEAVEIDEFV NAMKLNERIT TGKYIPYSSH VDKNIVKTKN GDYVATWQLM GINFESISAE MLETIDSQVA TLVRSFSGLP VSFYNHSCRA SFYDAFTTKS GNKYADIISD CYYGSMKKNK FKGNTLYFTL IYRPDGRVEK LEKRKKSIKE KKDDINIHVK RMNEMINTFS GALDKFTCKI LGMYEENGKV FSSQLSFYNY LLTGKLQKIR VTDSPVYNVL GGVDVFFNHD TGQICRIDGN KFFRSIEIKD FCSETASGVF DVLQYSDADY IITHSYTSMS KSEALSTIKR AEKQLKSTED DAVTQLQELE KAKNDIVSGD ISFGYYHFTL MVMADSIREL DESVSKITAD FTDLGIIPAL STMSLPAAYF AQLPAVFHLR PRL // ID E9VHR8_ECOLX Unreviewed; 914 AA. AC E9VHR8; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 16-APR-2014, entry version 7. DE SubName: Full=VirB4 family protein type IV secretion/conjugal transfer ATPase; GN ORFNames=ERKG_04876; OS Escherichia coli H252. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=656388; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=H252; RG The Broad Institute Genome Sequencing Platform; RA Feldgarden M., Gordon D.M., Johnson J.R., Johnston B.D., Young S.K., RA Zeng Q., Gargeya S., Alvarado L., Berlin A., Chapman S.B., Chen Z., RA Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., RA Heilman E., Heiman D., Howarth C., Mehta T., Neiman D., Pearson M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA White J., Yandava C., Haas B., Nusbaum C., Birren B.; RT "The Genome Sequence of Escherichia coli strain H252."; RL Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEFI01000040; EGB44602.1; -; Genomic_DNA. DR EnsemblBacteria; EGB44602; EGB44602; ERKG_04876. DR PATRIC; 47961839; VBIEscCol162925_5117. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 914 AA; 103385 MW; 223C3479FC9C6044 CRC64; MAKLLKAMKR PAALWGVPMV PLLTVVGVTI IVAIWTSIAL LLFLPIEFLV MKSLTRNEPL RFNLIAVWLR VRGNPVANRL FGATAFMPVE HNAVDIQEFI DAMKLNQCAT IKKYIPYSSH IHPNVVRSLN SDFFCTWELT GTPFDCESDE TLQFGTNQLH GLIRSFEGFP VTFYVHNSRE QFTDSLHKVS GNPYADTVSE RYYASLNKRP FRRNRLFVTI CYRPFASLDK ANRKRMKDGQ KLKEIDSALL EVLEIKSTLD TALSRYGAHA LGTFTENEAV FSSQLAFYEY LLTHQWRKVR VTRTPAYNVM GNVALYFSAE SGQINHVNGT QYFRGLEVKE FSEETATGMT DSLLYAPCDY VITQSYTCMS REEAKKAIKR TRRLMMSADD DAVSQRLDLD VALDLLTSGK IAYGKHHLSI MVFSPSLESL IADTNEISNA LNNIGITPVP AEISLSAAYM AQLPGNYNLR PRAGELSSLN FVELASLHNF YPGKRDKAPW GDAMALVRTP SGDGYYLNLH NTLADKDEFN EKNPASTCIL GTNGSGKTML MTFLQINQQK YNRDDSFSPD ARTKRLTTVY LDKDRGAEIN IRALGGKYYR VFSGEPTGWN PFALPATKRN INFIKQLMKI LCTRNGATIT PRDERRLNDA VNAVMSDEPQ YRVYGITRML ENLPEPATRE AQENGLSIRL SQWARGGEFG WVFDNEHDTF DISNCDNFGI DGTEFLDDPN VCAPISFYLL YRITSLLDGR RLVIFMDEFW KWLRDPVFKD FAYNKLKTIR KLNGMLVVGT QSPAEIIKDE IAPAVIEQCG TQILAANPSA DRSHYVDGMK FEPEVFDVIK GLDPQARQYV VVKNQFRRGD TKRFAARITL DLSGIGRYTK VMSGDAPNLE IFESLYQEGM KPSDWLDSYL AKAL // ID E9XFR9_ECOLX Unreviewed; 917 AA. AC E9XFR9; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 16-APR-2014, entry version 7. DE SubName: Full=VirB4 family protein type IV secretion/conjugal transfer ATPase; GN ORFNames=EREG_04790; OS Escherichia coli H120. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=656383; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=H120; RG The Broad Institute Genome Sequencing Platform; RA Feldgarden M., Gordon D.M., Johnson J.R., Johnston B.D., Young S.K., RA Zeng Q., Gargeya S., Alvarado L., Berlin A., Chapman S.B., Chen Z., RA Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., RA Heilman E., Heiman D., Howarth C., Mehta T., Neiman D., Pearson M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA White J., Yandava C., Haas B., Nusbaum C., Birren B.; RT "The Genome Sequence of Escherichia coli strain H120."; RL Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEHV01000134; EGB39659.1; -; Genomic_DNA. DR EnsemblBacteria; EGB39659; EGB39659; EREG_04790. DR PATRIC; 48013621; VBIEscCol162867_4946. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 917 AA; 104993 MW; D64A038DAAA97CED CRC64; MSTLFKGLTR PALIRGLGVP LYPFLGMCII CVLLGVWIHE AMYALILPGW YAIRRVTQFD ERFFDLLYLR TLVKGHSLSN KRFSAVHYAG SQYDEVDISK VDNFMKLKDQ SSVEELIPYS SHITDNIIVT KNRDLLATWQ IDGAYFECVD SEDLSILTDQ LNTLIRSFEG KSVTLYPHRI RCKKDVRPVF NSKIPFVNRV MNDYYESFPQ SEFFENKLFL TICFKPFTTE DKVTHFFSRG KKQKDIFKEP VNEMNEICDR LNTYLSRFHS RRLGLYEDHG VVYSDQLSLF QYLLSGRWQK VRVSSSPFYT YLGGKDLFFG NDAGQITASD HARYFRCIEI KDYFQETDAG ILDALMYLPV EYVVTSSFTA MDKQSAIKAL DDQIDKLEMT DDAAKSLLAD LKVGLDMVSS GYISFGKSHQ TLVVFADSPE RLVKDTNIVT STLEDLGLIV TYSTLSLGAA YFAQLPGNYT LRPRLSTLSS LNFAEMESFH NFFSGKEKGN TWGEKLITLR GSGNDIYHLN YHMTTEHQNF FGKNPTLGHT EILGTSNVGK TVLLMTKAFA AQQFGTPESF PANRKLKKLT TVFFDKDRAG EVGIRAMGGS YYRVKEGEPT GWNPAALPPT KRNIAFMKDL VRLLCTLNSE PLDDYQNSLI SDAVERLMQR SDRSYPISKL RPLIQEPDDT ETKRHGLKAR LKPWTQGEEF GWVFDNREDT FDVDNLDVFG IDGTEFLDNK VLASAASFYL IYRVTMLADG RRLLIYMDEF WQWINNEAFR DFVYNKLKTG RKLDMVLVVA TQSPDELIKS PIAAAVREQC ATHIYLANPK AKRSEYVDGL QVRELYFDKI KAIDPLSRQF LVVKNPQRKG ESDDFAAFAR LELGKAAYYL PVLSASKPQL ELFDDIWKEG MKPEEWLDTY LEQANLI // ID E9XV53_ECOLX Unreviewed; 915 AA. AC E9XV53; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 16-APR-2014, entry version 7. DE SubName: Full=VirB4 family protein type IV secretion/conjugal transfer ATPase; GN ORFNames=ERFG_04957; OS Escherichia coli TW10509. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=656449; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=TW10509; RG The Broad Institute Genome Sequencing Platform; RA Feldgarden M., Gordon D.M., Johnson J.R., Johnston B.D., Young S.K., RA Zeng Q., Gargeya S., Alvarado L., Berlin A., Chapman S.B., Chen Z., RA Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., RA Heilman E., Heiman D., Howarth C., Mehta T., Neiman D., Pearson M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA White J., Yandava C., Haas B., Nusbaum C., Birren B.; RT "The Genome Sequence of Escherichia coli strain TW10509."; RL Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEHW01000056; EGB69268.1; -; Genomic_DNA. DR EnsemblBacteria; EGB69268; EGB69268; ERFG_04957. DR PATRIC; 48024631; VBIEscCol161062_5197. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 915 AA; 103920 MW; 2452315F26A946C4 CRC64; MSTLYKAMTR PAMYVGVPVV PLTVVAGALF LAGVYISKLI WLAIPVAVFI LRMITKQDDH IFNLYFLKLK MLGNSVCNRF FGARAFLSGQ YEAVEIDEFV NAMKLNERIT TGKYIPYSSH VDKNIVKTKN GDYVATWQLM GINFESISAE MLETIDSQVA TLVRSFSGLP VSFYNHSCRA SFYDAFTTKS GNKYADIISD CYYGSMKKNK FKGNTLYFTL IYRPDGRVEK LEKRKKSIKE KKDDIHIHVK RMNEMINTFS GALDKFTCKL LGMYEENGKV FSSQLSFYNY LLTGKLQKIR VTDSPVYNVL GGVDVFFNHD TGQICRIDGN KFFRSIEIKD FCSETASGVF DVLQYSDADY IITHSYTSMS KSEALSTIKR AEKQLKSTED DAVTQLQELE KAKNDIVSGD ISFGYYHFTI MVMADSIREL DESVSKITAD FTDLGIIPAL STMSLPAAYF AQLPAVFHLR PRLSPVSNVN FVELASFHNF YQGKRDKNCW TEAVAILKTP SKQAYYLNLH NSVLFKDETG EKNLANTKVI GTAGSGKTMF LSYLACSLQK YNNPETFADS AKNKKLTCVF LDKDRGAELC IRMLGGEYYT VKSGEPTGWN PFALEATKRN RIFVKQLMEI LCTRNGERLS TRERLLISES VDAVMDFPPG EMREYGITRM LEHLMQRDDR DEQENGIILR LSQWANSQAH GWVFDNAKDT FNIQHVNNFG IDGTEFLDDP MVCAPITFYL LYRITQLLDG RRLVIFLDEF WKWLQDEAFS DFVYNKLKTI RKLNGLVIPA TQSPDEILKN KISRAVVEVC STSIYLANPD ADYNDYVEGL KLTPEEFNII KNLDPMSRQF LIKKSSLKKG DGKSFSALAT LDLSGLGGYL KILSASADNL EIFESIYHEG MEPDDWVPEY LERAI // ID E9YM88_ECOLX Unreviewed; 917 AA. AC E9YM88; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 16-APR-2014, entry version 7. DE SubName: Full=VirB4 family protein type IV secretion/conjugal transfer ATPase; GN ORFNames=ERHG_04768; OS Escherichia coli TA007. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=656429; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=TA007; RG The Broad Institute Genome Sequencing Platform; RA Feldgarden M., Gordon D.M., Johnson J.R., Johnston B.D., Young S.K., RA Zeng Q., Gargeya S., Alvarado L., Berlin A., Chapman S.B., Chen Z., RA Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., RA Heilman E., Heiman D., Howarth C., Mehta T., Neiman D., Pearson M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA White J., Yandava C., Haas B., Nusbaum C., Birren B.; RT "The Genome Sequence of Escherichia coli strain TA007."; RL Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEHY01000133; EGB64461.1; -; Genomic_DNA. DR EnsemblBacteria; EGB64461; EGB64461; ERHG_04768. DR PATRIC; 48045552; VBIEscCol162956_5020. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 917 AA; 105007 MW; 974A038DAAA97D36 CRC64; MSTLFKGLTR PALIRGLGVP LYPFLGMCII CVLLGVWIHE AMYALILPGW YAIRRVTQFD ERFFDLLYLR TLVKGHSLSN KRFSAVHYAG SQYDEVDISK VDNFMKLKDQ SSVEELIPYS SHITDNIIVT KNRDLLATWQ IDGAYFECVD SEDLSILTDQ LNTLIRSFEG KSVTLYPHRI RCKKDVRPVF NSKIPFVNRV MNDYYESFPQ SEFFENKLFL TICFKPFTTE DKVTHFFSRG KKQKDIFKEP VNEMNEICDR LNTYLSRFHS RRLGLYEDHG VVYSDQLSLF QYLLSGRWQK VRVSSSPFYT YLGGKDLFFG NDAGQITASD HARYFRCIEI KDYFQETDAG ILDALMYLPV EYVVTSSFTA MDKQSAIKAL DDQIDKLEMT DDAAKSLLAD LKVGLDMVSS GYISFGKSHQ TLVVFADSPE RLVKDTNIVT STLEDLGLIV TYSTLSLGAA YFAQLPGNYT LRPRLSTLSS LNFAEMESFH NFFSGKEKGN TWGEKLITLR GSGNDIYHLN YHMTTEHQNF FGKNPTLGHT EILGTSNVGK TVLLMTKAFA AQQFGTPESF PANRKLKKLT TVFFDKDRAG EVGIRAMGGS YYRVKEGEPT GWNPAALPPT KRNIAFMKDL VRLLCTLNSE PLDDYQNSLI SDAVERLMQR SDRSYPISKL RPLIQEPDDT ETKRHGLKAR LKPWTQGEEF GWVFDNREDT FDVDNLDVFG IDGTEFLDNK VLASAASFYL IYRVTMLADG RRLLIYMDEF WQWINNEAFR DFVYNKLKTG RKLDMVLVVA TQSPDELIKS PIAAAVREQC ATHIYLANPK AKRSEYVDGL QVRELYFDKI KAIDPLSRQF LVVKNPQRKG ESDDFAAFAR LELGKAAYYL PVLSASKPQL ELFDEIWKEG MKPEEWLDTY LEQANLI // ID E9ZEX2_ESCFE Unreviewed; 919 AA. AC E9ZEX2; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 16-APR-2014, entry version 7. DE SubName: Full=VirB4 family protein type IV secretion/conjugal transfer ATPase; GN ORFNames=ERIG_04377; OS Escherichia fergusonii B253. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=550694; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=B253; RG The Broad Institute Genome Sequencing Platform; RA Feldgarden M., Gordon D.M., Johnson J.R., Johnston B.D., Young S.K., RA Zeng Q., Gargeya S., Alvarado L., Berlin A., Chapman S.B., Chen Z., RA Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., RA Heilman E., Heiman D., Howarth C., Mehta T., Neiman D., Pearson M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA White J., Yandava C., Haas B., Nusbaum C., Birren B.; RT "The Genome Sequence of Escherichia fergusonii strain B253."; RL Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEIA01000027; EGC04927.1; -; Genomic_DNA. DR EnsemblBacteria; EGC04927; EGC04927; ERIG_04377. DR PATRIC; 52545460; VBIEscFer76022_4536. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 919 AA; 104759 MW; 15BF38A050583177 CRC64; MSTVFKGLTR PALIRGLGVP LYPFLAMCVL VVLLGVWIDD LMYFLILPGW FAIKRVTKID ERFFDLLYLR AVVKGHPLAN KRFSAVHYAG SQYDEVDISK VDNFMKLKDQ ASIEALIPYS SHITDDLVVT KNRDLLATWQ VDGAYFECVD DEDLTLLTDQ LNTLIRSFEG RAITFYTHRV RVRKEVKVGF NSKIPFVNRV MNDYYSSLSE PEYFENRLYL TICYKPFNIE DKVSHFISKN KKENNIFDEP INDMNEICGR LDTYLSRFHA HRLGLVEENG RVFSDQLSLF QYLLSGKWQK VRVTNSPFYT YLGGKDLFFG NDAGQITASQ NARYFRSIEI KDYFQETDAG IFDALMYLPV EYVFTSSFTS MDKQAAVKAL DDQIDKLELT DDAAKSLLAD LRVGLDMVSS GYNSFGKCHQ TLIVFADTPE RLVKDTNIVT TTLEDLGLIV TYSTLSLGAA FFSQLPGNYN LRPRLSMLSS LNFAEMESFH NFFHGKATGN TWGNSLMALR GSGNDVYHLN YHMTTENINF FGKNPTLGHC EILGTSNVGK TVLMMIMSYA AQQFGTPESF PENRKVRKLT TVFFDKDRAG EVGIRAMGGA YFRVKGGEPT GWNPAALPPT KRNIAFVKDI IRLICKLNGN TVDDYQHSLI SSAVDRLMQR EDRSFPISKL IPLIMEPDDT ETKRHGLKAR LRAWKQGGEY GWLLDNASDS FDVAHLDVFG IDGTEFLDDK VVAPVASFYL IYRVTMLADG RRLLIYMDEF WQWINNDAFK DFVYNKLKTG RKLDMVLVPA TQSPDELIKS PIAAAVREQC ATHIYLANPK AKRNEYVDEL QVRDLYFDKI KAIDPLSRQF LVVKNPQRQG ERDDFAAFAK LDLGKAAYYL PILSASAEQL ELFDEIWSEG MAPEEWIDTY LERANRGVK // ID F0BI77_9XANT Unreviewed; 103 AA. AC F0BI77; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 14-DEC-2011, entry version 4. DE SubName: Full=Type IV secretory pathway, VirB3 component; GN ORFNames=XVE_3979; OS Xanthomonas vesicatoria ATCC 35937. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=925775; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 35937; RX PubMed=21396108; DOI=10.1186/1471-2164-12-146; RA Potnis N., Krasileva K., Chow V., Almeida N.F., Patil P.B., Ryan R.P., RA Sharlach M., Behlau F., Dow J.M., Momol M.T., White F.F., RA Preston J.F., Vinatzer B.A., Koebnik R., Setubal J.C., Norman D.J., RA Staskawicz B.J., Jones J.B.; RT "Comparative genomics reveals diversity among xanthomonads infecting RT tomato and pepper."; RL BMC Genomics 12:146-146(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEQV01000175; EGD07842.1; -; Genomic_DNA. DR PATRIC; 46608675; VBIXanVes179409_3789. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 103 AA; 12170 MW; 9253AF9B7C552C93 CRC64; MHKDVLFRGC TRPAMFLGVP YIPFFIGAGG GLLLGMYINL WYLFTIPVII FAMQQMAKRD EMIFRLLGLR WLFRMRARNL QRYSGMWVFS PNEYRKTPPG KSR // ID F0BLK1_9XANT Unreviewed; 89 AA. AC F0BLK1; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 03-APR-2013, entry version 5. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=XPE_0072; OS Xanthomonas perforans 91-118. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=925776; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=91-118; RX PubMed=21396108; DOI=10.1186/1471-2164-12-146; RA Potnis N., Krasileva K., Chow V., Almeida N.F., Patil P.B., Ryan R.P., RA Sharlach M., Behlau F., Dow J.M., Momol M.T., White F.F., RA Preston J.F., Vinatzer B.A., Koebnik R., Setubal J.C., Norman D.J., RA Staskawicz B.J., Jones J.B.; RT "Comparative genomics reveals diversity among xanthomonads infecting RT tomato and pepper."; RL BMC Genomics 12:146-146(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEQW01000001; EGD16275.1; -; Genomic_DNA. DR EnsemblBacteria; EGD16275; EGD16275; XPE_0072. DR PATRIC; 46611062; VBIXanPer180062_0065. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 89 AA; 10536 MW; 84C414242472EEF0 CRC64; MFLGVPYIPF FIGAGGGLLL GMYINLWYLL TIPVIIFAMQ QMAKRDEMIF RLLGLRWLFR MRARNLQRYS GMWVFSPNEY RKNPPGKSR // ID F0BTV2_9XANT Unreviewed; 94 AA. AC F0BTV2; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 03-APR-2013, entry version 5. DE SubName: Full=Type IV secretory pathway, TrbD component; DE Flags: Fragment; GN ORFNames=XPE_2760; OS Xanthomonas perforans 91-118. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=925776; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=91-118; RX PubMed=21396108; DOI=10.1186/1471-2164-12-146; RA Potnis N., Krasileva K., Chow V., Almeida N.F., Patil P.B., Ryan R.P., RA Sharlach M., Behlau F., Dow J.M., Momol M.T., White F.F., RA Preston J.F., Vinatzer B.A., Koebnik R., Setubal J.C., Norman D.J., RA Staskawicz B.J., Jones J.B.; RT "Comparative genomics reveals diversity among xanthomonads infecting RT tomato and pepper."; RL BMC Genomics 12:146-146(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEQW01000158; EGD13636.1; -; Genomic_DNA. DR EnsemblBacteria; EGD13636; EGD13636; XPE_2760. DR PATRIC; 46616654; VBIXanPer180062_2677. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; FT NON_TER 1 1 SQ SEQUENCE 94 AA; 10576 MW; 46CCC4B49442BCC2 CRC64; AARCSDMDEN ANPDGYEVPV HRALSTPRLI AGIPRDIAVV SFTMAAALIF GLQSWWSLPL YLVIHIGLVL MTKYDTQWPA ALRRALRLKN HYRA // ID F0C267_9XANT Unreviewed; 103 AA. AC F0C267; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretory pathway, VirB3 component; GN ORFNames=XGA_0932; OS Xanthomonas gardneri ATCC 19865. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=925777; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 19865; RX PubMed=21396108; DOI=10.1186/1471-2164-12-146; RA Potnis N., Krasileva K., Chow V., Almeida N.F., Patil P.B., Ryan R.P., RA Sharlach M., Behlau F., Dow J.M., Momol M.T., White F.F., RA Preston J.F., Vinatzer B.A., Koebnik R., Setubal J.C., Norman D.J., RA Staskawicz B.J., Jones J.B.; RT "Comparative genomics reveals diversity among xanthomonads infecting RT tomato and pepper."; RL BMC Genomics 12:146-146(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEQX01000084; EGD20395.1; -; Genomic_DNA. DR EnsemblBacteria; EGD20395; EGD20395; XGA_0932. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 103 AA; 12116 MW; 925608E171249449 CRC64; MHKDVLFRGC TRPAMFLGVP YIPFFIGAGG GLLLGMYLNL WYLLTIPVII FAMQQMAKRD EMIFRLLGLR WLFRMRARNL QRYSGMWVFT PNEYRKGPPG KPR // ID F0CAY2_9XANT Unreviewed; 100 AA. AC F0CAY2; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretory pathway, TrbD component; DE Flags: Fragment; GN ORFNames=XGA_4111; OS Xanthomonas gardneri ATCC 19865. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=925777; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 19865; RX PubMed=21396108; DOI=10.1186/1471-2164-12-146; RA Potnis N., Krasileva K., Chow V., Almeida N.F., Patil P.B., Ryan R.P., RA Sharlach M., Behlau F., Dow J.M., Momol M.T., White F.F., RA Preston J.F., Vinatzer B.A., Koebnik R., Setubal J.C., Norman D.J., RA Staskawicz B.J., Jones J.B.; RT "Comparative genomics reveals diversity among xanthomonads infecting RT tomato and pepper."; RL BMC Genomics 12:146-146(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEQX01000399; EGD17300.1; -; Genomic_DNA. DR EnsemblBacteria; EGD17300; EGD17300; XGA_4111. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; FT NON_TER 1 1 SQ SEQUENCE 100 AA; 11518 MW; 9702403A6AC1E7E4 CRC64; LPWLRRRRGV LIVDEQTNPD GYEVPVHRAL STPRLLVGIP RDMAVVAFTT AAALVLGLQS WWSLPFYMVI HIGLVLLTKY DTQWPEALKR ALRLKNHYRA // ID F0CB30_9XANT Unreviewed; 94 AA. AC F0CB30; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretory pathway, TrbD component; GN ORFNames=XGA_4162; OS Xanthomonas gardneri ATCC 19865. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=925777; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 19865; RX PubMed=21396108; DOI=10.1186/1471-2164-12-146; RA Potnis N., Krasileva K., Chow V., Almeida N.F., Patil P.B., Ryan R.P., RA Sharlach M., Behlau F., Dow J.M., Momol M.T., White F.F., RA Preston J.F., Vinatzer B.A., Koebnik R., Setubal J.C., Norman D.J., RA Staskawicz B.J., Jones J.B.; RT "Comparative genomics reveals diversity among xanthomonads infecting RT tomato and pepper."; RL BMC Genomics 12:146-146(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEQX01000408; EGD17233.1; -; Genomic_DNA. DR EnsemblBacteria; EGD17233; EGD17233; XGA_4162. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 94 AA; 9872 MW; B7CB941E66D79C50 CRC64; MSAANEGAPG FASGFEIPLH RSLTEPILLG GAPRTVAIAN GTLAAAVGLG LQLWIPGAVL WIVGHSLAVW GARVDPQFMQ VFARHIKHKP LLDV // ID F0EY92_9NEIS Unreviewed; 145 AA. AC F0EY92; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 18-SEP-2013, entry version 4. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=HMPREF9098_0826; OS Kingella denitrificans ATCC 33394. OC Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; OC Neisseriaceae; Kingella. OX NCBI_TaxID=888741; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 33394; RA Muzny D., Qin X., Deng J., Jiang H., Liu Y., Qu J., Song X.-Z., RA Zhang L., Thornton R., Coyle M., Francisco L., Jackson L., Javaid M., RA Korchina V., Kovar C., Mata R., Mathew T., Ngo R., Nguyen L., RA Nguyen N., Okwuonu G., Ongeri F., Pham C., Simmons D., RA Wilczek-Boney K., Hale W., Jakkamsetti A., Pham P., Ruth R., RA San Lucas F., Warren J., Zhang J., Zhao Z., Zhou C., Zhu D., Lee S., RA Bess C., Blankenburg K., Forbes L., Fu Q., Gubbala S., Hirani K., RA Jayaseelan J.C., Lara F., Munidasa M., Palculict T., Patil S., RA Pu L.-L., Saada N., Tang L., Weissenberger G., Zhu Y., Hemphill L., RA Shang Y., Youmans B., Ayvaz T., Ross M., Santibanez J., Aqrawi P., RA Gross S., Joshi V., Fowler G., Nazareth L., Reid J., Worley K., RA Petrosino J., Highlander S., Gibbs R.; RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEWV01000015; EGC17500.1; -; Genomic_DNA. DR EnsemblBacteria; EGC17500; EGC17500; HMPREF9098_0826. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 145 AA; 16703 MW; 51DE5DD3205A99C6 CRC64; MAIMETNEVD INTEYLTYAG INRSALILGM PMIPMVLIII FFVTAAMFAM PVLENRAWAI VLLALPCLWF LREVTAKDDQ ALRILGLELY WFFQQRNMKL HNNTFAIYAT RYGRQHHEYI RIIAADADKA ARTAELFAPC QSPRC // ID F0J2K4_ACIMA Unreviewed; 90 AA. AC F0J2K4; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 01-MAY-2013, entry version 12. DE SubName: Full=Putative conjugal transfer protein TrbD; GN Name=trbD; OrderedLocusNames=ACMV_26010; OS Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Acetobacteraceae; Acidiphilium. OX NCBI_TaxID=926570; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 11245 / JCM 8867 / AIU301; RA Narita-Yamada S., Nakamura S., Ito N., Takarada H., Katano Y., RA Nakazawa H., Hosoyama A., Yamada R., Fujita N.; RT "Whole genome sequence of Acidiphilium multivorum AIU301."; RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP012035; BAJ81948.1; -; Genomic_DNA. DR RefSeq; YP_004284830.1; NC_015186.1. DR EnsemblBacteria; BAJ81948; BAJ81948; ACMV_26010. DR GeneID; 10321395; -. DR KEGG; amv:ACMV_26010; -. DR PATRIC; 46814124; VBIAciMul178205_3004. DR KO; K03198; -. DR BioCyc; AMUL926570:GI8V-2643-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 90 AA; 9609 MW; D1468701BA0CE049 CRC64; MSNPADIPGW SVPLHRSLTE PILLAGIPRG MAIAIGTLAA AIGLGLQLWL AGIAIYLIGH TAALFLTRQD PQFGPVFARH LRAARHHLDT // ID F0J2Y7_ACIMA Unreviewed; 90 AA. AC F0J2Y7; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 01-MAY-2013, entry version 12. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=ACMV_04290; OS Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Acetobacteraceae; Acidiphilium. OX NCBI_TaxID=926570; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 11245 / JCM 8867 / AIU301; RA Narita-Yamada S., Nakamura S., Ito N., Takarada H., Katano Y., RA Nakazawa H., Hosoyama A., Yamada R., Fujita N.; RT "Whole genome sequence of Acidiphilium multivorum AIU301."; RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP012035; BAJ79776.1; -; Genomic_DNA. DR RefSeq; YP_004282658.1; NC_015186.1. DR EnsemblBacteria; BAJ79776; BAJ79776; ACMV_04290. DR GeneID; 10321391; -. DR KEGG; amv:ACMV_04290; -. DR PATRIC; 46809575; VBIAciMul178205_0782. DR KO; K03198; -. DR BioCyc; AMUL926570:GI8V-437-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 90 AA; 9554 MW; 7136E836AEDE754A CRC64; MNGPADLPGW SVPLHRSLTE PILLGGVPRG MAIALGTLSA AIGLGLQLWI AGIAIYLIGH AAALFLTRQD PQFGPVFARH LRAARRHLDV // ID F0J779_ACIMA Unreviewed; 110 AA. AC F0J779; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 13-NOV-2013, entry version 12. DE SubName: Full=Type IV secretion system VirB3; GN Name=virB3; OrderedLocusNames=ACMV_P1_01500; OS Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301). OG Plasmid pACMV1. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Acetobacteraceae; Acidiphilium. OX NCBI_TaxID=926570; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 11245 / JCM 8867 / AIU301; PLASMID=pACMV1; RA Narita-Yamada S., Nakamura S., Ito N., Takarada H., Katano Y., RA Nakazawa H., Hosoyama A., Yamada R., Fujita N.; RT "Whole genome sequence of Acidiphilium multivorum AIU301."; RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP012036; BAJ82946.1; -; Genomic_DNA. DR RefSeq; YP_004277088.1; NC_015178.1. DR EnsemblBacteria; BAJ82946; BAJ82946; ACMV_P1_01500. DR GeneID; 10250934; -. DR KEGG; amv:ACMV_P1_01500; -. DR PATRIC; 46808272; VBIAciMul178205_0144. DR KO; K03198; -. DR BioCyc; AMUL926570:GI8V-3655-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 110 AA; 12336 MW; 3ED61AAD3081FDE5 CRC64; MTERQRDPLF VAATRPALFL GLPIEMAVVI IMIGAMIVIF GHNPFYLTLV LPLWFGARWL VRYDYNAPRV AWLWFRTKAT GAGENQAWGG ASPAPFPMKV QKGRGMRDAG // ID F0J7S8_ACIMA Unreviewed; 110 AA. AC F0J7S8; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 13-NOV-2013, entry version 12. DE SubName: Full=Type IV secretion system VirB3; GN Name=virB3; OrderedLocusNames=ACMV_P2_00650; OS Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301). OG Plasmid pACMV2. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Acetobacteraceae; Acidiphilium. OX NCBI_TaxID=926570; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 11245 / JCM 8867 / AIU301; PLASMID=pACMV2; RA Narita-Yamada S., Nakamura S., Ito N., Takarada H., Katano Y., RA Nakazawa H., Hosoyama A., Yamada R., Fujita N.; RT "Whole genome sequence of Acidiphilium multivorum AIU301."; RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP012037; BAJ83145.1; -; Genomic_DNA. DR RefSeq; YP_004285743.1; NC_015187.1. DR EnsemblBacteria; BAJ83145; BAJ83145; ACMV_P2_00650. DR GeneID; 10270868; -. DR KEGG; amv:ACMV_P2_00650; -. DR PATRIC; 46816034; VBIAciMul178205_3943. DR KO; K03198; -. DR BioCyc; AMUL926570:GI8V-3854-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 110 AA; 12294 MW; 9ECEB01F2E9E7703 CRC64; MSERQRDPLF VAATRPALFL GLPIEMAVAI IMIGAMIVIF GHNPFYLTLV LPLWFGARWL VRYDYNAPRV AWLWFRTKAT GAGENQAWGG ASPAPFPMKV QKGRGMRDAG // ID F0LGB2_AGRSH Unreviewed; 113 AA. AC F0LGB2; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 16-APR-2014, entry version 17. DE SubName: Full=Type IV secretion protein AvhB3; GN OrderedLocusNames=AGROH133_14792; OS Agrobacterium sp. (strain H13-3) (Rhizobium lupini (strain H13-3)). OG Plasmid pAspH13-3a. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium. OX NCBI_TaxID=861208; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=H13-3; PLASMID=pAspH13-3a; RX PubMed=21329740; DOI=10.1016/j.jbiotec.2011.01.010; RA Wibberg D., Blom J., Jaenicke S., Kollin F., Rupp O., Scharf B., RA Schneiker-Bekel S., Sczcepanowski R., Goesmann A., Setubal J.C., RA Schmitt R., Puhler A., Schluter A.; RT "Complete genome sequencing of Agrobacterium sp. H13-3, the former RT Rhizobium lupini H13-3, reveals a tripartite genome consisting of a RT circular and a linear chromosome and an accessory plasmid but lacking RT a tumor-inducing Ti-plasmid."; RL J. Biotechnol. 155:50-62(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002250; ADY68094.1; -; Genomic_DNA. DR RefSeq; YP_004280472.1; NC_015184.1. DR EnsemblBacteria; ADY68094; ADY68094; AGROH133_14792. DR GeneID; 10268959; -. DR KEGG; agr:AGROH133_14792; -. DR PATRIC; 46851152; VBIAgrSp164909_3150. DR KO; K03198; -. DR OMA; HDHNMFR; -. DR BioCyc; ASP861208:GH59-5169-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 113 AA; 12565 MW; A4ED4501D65B5EB2 CRC64; MVGGQTVLEE DTLFIACTRP AMIAGVTMEA MGFNIMVTTI LYIVAGSIAY AFVGIVFHLI FKALVKHDHN MFRILLAWVE TRGRSRNGAY WGGATLSPLR LTRRFDERDI GIA // ID F0TD22_9PROT Unreviewed; 103 AA. AC F0TD22; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 22-JAN-2014, entry version 11. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN ORFNames=NAL212_0034; OS Nitrosomonas sp. AL212. OG Plasmid pNAL21201. OC Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; OC Nitrosomonadaceae; Nitrosomonas. OX NCBI_TaxID=153948; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=AL212; PLASMID=pNAL21201; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., RA Pitluck S., Chertkov O., Held B., Detter J.C., Han C., Tapia R., RA Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., RA Suwa Y., Klotz M.G., Bollmann A., Stein L.Y., Laanbroek H.J., RA Arp D.J., Norton J.M., Woyke T.; RT "Complete sequence of plasmid1 of Nitrosomonas sp. AL212."; RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002553; ADZ27984.1; -; Genomic_DNA. DR RefSeq; YP_004296146.1; NC_015223.1. DR EnsemblBacteria; ADZ27984; ADZ27984; NAL212_0034. DR GeneID; 10299773; -. DR KEGG; nit:NAL212_0034; -. DR PATRIC; 46992586; VBINitSp88817_3330. DR KO; K03198; -. DR BioCyc; NSP153948:GHZ8-3111-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 103 AA; 12029 MW; 0A842CDB7A30DEAB CRC64; MALRTIPIRQ SGNRPNLFMG GDRELVMFSI LIAATSIFVA MEIKATIFGI ALWFFALFAL RLMAKNDPQL RHVYLRQIQY KKYYPARSTP FYDNTLTQEK QHL // ID F0TD68_9PROT Unreviewed; 103 AA. AC F0TD68; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 22-JAN-2014, entry version 11. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=NAL212_0114; OS Nitrosomonas sp. AL212. OG Plasmid pNAL21202. OC Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; OC Nitrosomonadaceae; Nitrosomonas. OX NCBI_TaxID=153948; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=AL212; PLASMID=pNAL21202; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., RA Pitluck S., Chertkov O., Held B., Detter J.C., Han C., Tapia R., RA Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., RA Suwa Y., Klotz M.G., Bollmann A., Stein L.Y., Laanbroek H.J., RA Arp D.J., Norton J.M., Woyke T.; RT "Complete sequence of plasmid2 of Nitrosomonas sp. AL212."; RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002554; ADZ28058.1; -; Genomic_DNA. DR RefSeq; YP_004293237.1; NC_015221.1. DR EnsemblBacteria; ADZ28058; ADZ28058; NAL212_0114. DR GeneID; 10296613; -. DR KEGG; nit:NAL212_0114; -. DR PATRIC; 46985845; VBINitSp88817_0021. DR KO; K03198; -. DR BioCyc; NSP153948:GHZ8-3191-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 103 AA; 12003 MW; 18142CDB7A30DEAB CRC64; MALRTIPIRQ SGNRPNLFMG GDRELVMFSI LIAATSIFVA MEIKATIFGI ALWFFALFAL RLMAKNDPQL RHVYLRQIQY KKYYPARSTP FYDNTLTQEK QHS // ID F1Y2X9_ECO57 Unreviewed; 106 AA. AC F1Y2X9; DT 31-MAY-2011, integrated into UniProtKB/TrEMBL. DT 31-MAY-2011, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Inner membrane protein forms channel for type IV secretion of T-DNA complex, VirB3; GN ORFNames=ECF_01751; OS Escherichia coli O157:H7 str. 1125. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=997825; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=1125; RA Mane S.P., Sobral B.W., Cebula T., Munk A.C., Tapia R., Green L., RA Rogers Y., Detter J.C., Bruce D., Brettin T.S.; RT "E. coli O157.H7 #1125 Isolate A whole genome shotgun sequencing RT project."; RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AERR01000016; EGD68207.1; -; Genomic_DNA. DR EnsemblBacteria; EGD68207; EGD68207; ECF_01751. DR PATRIC; 47359256; VBIAEREsc185309_1755. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 106 AA; 11911 MW; C4EA81CA50B7A574 CRC64; MDKVNEHVSE SFMTYNGFNR PALIAGIPLM LLLFTAFFAV LTGFPAIFLW GIKGIIIPVI CALFLFIVKL ACENDSNALR VIRLNLMGLL LKIRHRDLII GYSSVR // ID F2A847_RHIET Unreviewed; 112 AA. AC F2A847; DT 31-MAY-2011, integrated into UniProtKB/TrEMBL. DT 31-MAY-2011, sequence version 1. DT 19-MAR-2014, entry version 6. DE SubName: Full=Transport secretion system IV, VirB3 protein; GN ORFNames=RHECNPAF_225006; OS Rhizobium etli CNPAF512. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium. OX NCBI_TaxID=993047; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=CNPAF512; RX PubMed=21515775; DOI=10.1128/JB.00310-11; RA Fauvart M., Sanchez-Rodriguez A., Beullens S., Marchal K., RA Michiels J.; RT "Genome sequence of Rhizobium etli CNPAF512, a nitrogen-fixing RT symbiont isolated from bean root nodules in Brazil."; RL J. Bacteriol. 193:3158-3159(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEYZ01000131; EGE59353.1; -; Genomic_DNA. DR EnsemblBacteria; EGE59353; EGE59353; RHECNPAF_225006. DR PATRIC; 53540167; VBIRhiEtl185341_2363. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 112 AA; 12488 MW; 42DCB19D051ABEE9 CRC64; MANAPSLEED ILFLACTRPA TIAGVTMEAM GVNIMLTTIL YIKAGSIAYA LIGVVFHVVF RALVKHDHNM FRILIAWIET RGRSRNAAYW GGATLSPLTL TRRYDERDLS FV // ID F2FAX1_9ZZZZ Unreviewed; 103 AA. AC F2FAX1; DT 31-MAY-2011, integrated into UniProtKB/TrEMBL. DT 31-MAY-2011, sequence version 1. DT 13-NOV-2013, entry version 5. DE SubName: Full=TrbD; GN Name=trbD; OS Plasmid pMCBF1. OG Plasmid pMCBF1. OC other sequences; plasmids. OX NCBI_TaxID=1003194; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pMCBF1; RX PubMed=21468020; RA Norberg P., Bergstrom M., Jethava V., Dubhashi D., Hermansson M.; RT "The IncP-1 plasmid backbone adapts to different host bacterial RT species and evolves through homologous recombination."; RL Nat. Commun. 2:268-268(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AY950444; AAY97918.1; -; Genomic_DNA. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11811 MW; 4DBDF05E06171F53 CRC64; MALRTIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QELRATVFGI ALWFGALFAL RLMAKADAKL RHVYLRHRRY KAYYPARSTP FRDNTNSQGK QYK // ID F2FPN0_SALDU Unreviewed; 876 AA. AC F2FPN0; DT 31-MAY-2011, integrated into UniProtKB/TrEMBL. DT 31-MAY-2011, sequence version 1. DT 16-APR-2014, entry version 13. DE SubName: Full=Pilx4 protein; GN ORFNames=SD3246_p079; OS Salmonella enterica subsp. enterica serovar Dublin str. SD3246. OG Plasmid p3246_74. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella. OX NCBI_TaxID=909945; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=3246; PLASMID=p3246_74; RX PubMed=21478351; DOI=10.1128/JB.00394-11; RA Richardson E.J., Limaye B., Inamdar H., Datta A., Manjari K.S., RA Pullinger G.D., Thomson N.R., Joshi R.R., Watson M., Stevens M.P.; RT "Genome sequences of Salmonella enterica serovar typhimurium, RT Choleraesuis, Dublin, and Gallinarum strains of well- defined RT virulence in food-producing animals."; RL J. Bacteriol. 193:3162-3163(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM001152; EGE28019.1; -; Genomic_DNA. DR EnsemblBacteria; EGE28019; EGE28019; SD3246_p079. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 876 AA; 100513 MW; C3E88FDC9B21E32C CRC64; MYALILPGWY AIRRVTQFDE RFFDLLYLRT LVKGHPLSNK RFSAVHYAGS QYDEVDISKV DNFMKLKDQS SVEELIPYSS HITDNIIVTK NRDLLATWQI DGAYFECVDS EDLSILTDQL NTLIRSFEGK SVTLYPHRIR CKKDVRPVFN SKIPFVNRVM NDYYESFPQS EFFENKLFLT ICFKPFTTED KVTHFFSRSK KQKDIFKEPV NEMNEICDRL NTYLSRFHSR RLGLYEDHGV VYSDQLSLFQ YLLSGRWQKV RVSSSPFYTY LGGKDLFFGN DAGQITASDH ARYFRCIEIK DYFQETDAGI LDALMYLPVE YVVTSSFTAM DKQSAIKALD DQIDKLEMTD DAAKSLLADL KVGLDMVSSG YISFGKSHQT LVVFADSPER LVKDTNIVTS TLEDLGLIVT YSTLSLGAAY FAQLPGNYTL RPRLSTLSSL NFAEMESFHN FFSGKEKGNT WGEKLITLQG SGNDIYHLNY HMTTEHQNFF GKNPTLGNTE ILGTSNVGKT VLLMTKAFAA QQFGTPESFP ANRKLKKLTT VFFDKDRAGE VGIRAMGGSY YRVKEGEPTG WNPAALPPTK RNIAFMKDLV RLLCTLNSEP LDDYQNSLIS DAVERLMQRS DRSYPISKLR PLIQEPDDTE TKRHGLKARL KPWTQGEEFG WVFDNREDTF DVDNLDVFGI DGTEFLDNKV LASAASFYLI YRVTMLADGR RLLIYMDEFW QWINNEAFRD FVYNKLKTGR KLDMVLVVAT QSPDELIKSP IAAAVREQCA THIYLANPKA KRSEYVDGLQ VRELYFDKIK AIDPLSRQFL VVKNPQRKGE SDDFAAFARL ELGKAAYYLP VLSASKPQLE LFDEIWKEGM KPEEWLDTYL EQANLI // ID F2GY96_BRUM5 Unreviewed; 88 AA. AC F2GY96; DT 31-MAY-2011, integrated into UniProtKB/TrEMBL. DT 31-MAY-2011, sequence version 1. DT 14-MAY-2014, entry version 11. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN OrderedLocusNames=BM590_B0068; OS Brucella melitensis (strain M5-90). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=703352; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=M5-90; RX PubMed=21478357; DOI=10.1128/JB.00357-11; RA Wang F., Hu S., Gao Y., Qiao Z., Liu W., Bu Z.; RT "Complete genome sequences of Brucella melitensis strains M28 and M5- RT 90, with different virulence backgrounds."; RL J. Bacteriol. 193:2904-2905(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001852; ADZ88185.1; -; Genomic_DNA. DR RefSeq; YP_005601689.1; NC_017247.1. DR EnsemblBacteria; ADZ88185; ADZ88185; BM590_B0068. DR GeneID; 12151655; -. DR KEGG; bmg:BM590_B0068; -. DR KO; K03198; -. DR OMA; FWGASSY; -. DR BioCyc; BMEL703352:GL9P-2287-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 88 AA; 10116 MW; 85B4A89B345A8CDF CRC64; MLFGVPVIPL VIVGGSIVLL SVWISMFILP LIVPIVLVMR QITQTDDQMF RLLGLKAQFR LIHFNRTGRF WRASAYSPIA FTKRKRES // ID F2HWN4_BRUMM Unreviewed; 88 AA. AC F2HWN4; DT 31-MAY-2011, integrated into UniProtKB/TrEMBL. DT 31-MAY-2011, sequence version 1. DT 29-MAY-2013, entry version 8. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN OrderedLocusNames=BM28_B0068; OS Brucella melitensis (strain M28). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=941967; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=M28; RX PubMed=21478357; DOI=10.1128/JB.00357-11; RA Wang F., Hu S., Gao Y., Qiao Z., Liu W., Bu Z.; RT "Complete genome sequences of Brucella melitensis strains M28 and M5- RT 90, with different virulence backgrounds."; RL J. Bacteriol. 193:2904-2905(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002460; ADZ67317.1; -; Genomic_DNA. DR RefSeq; YP_005598326.1; NC_017245.1. DR EnsemblBacteria; ADZ67317; ADZ67317; BM28_B0068. DR GeneID; 12154516; -. DR KEGG; bmz:BM28_B0068; -. DR PATRIC; 47102214; VBIBruMel176544_2242. DR KO; K03198; -. DR BioCyc; BMEL941967:GL9M-2289-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 88 AA; 10116 MW; 85B4A89B345A8CDF CRC64; MLFGVPVIPL VIVGGSIVLL SVWISMFILP LIVPIVLVMR QITQTDDQMF RLLGLKAQFR LIHFNRTGRF WRASAYSPIA FTKRKRES // ID F2J174_POLGS Unreviewed; 93 AA. AC F2J174; DT 31-MAY-2011, integrated into UniProtKB/TrEMBL. DT 31-MAY-2011, sequence version 1. DT 14-MAY-2014, entry version 10. DE SubName: Full=Conjugal transfer protein TrbB; GN OrderedLocusNames=SL003B_0284; OS Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1). OC Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum. OX NCBI_TaxID=991905; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=LMG 25793 / CGMCC 1.9160 / SL003B-26A1; RX PubMed=21478361; DOI=10.1128/JB.00333-11; RA Li S.G., Tang Y.Q., Nie Y., Cai M., Wu X.L.; RT "Complete genome sequence of Polymorphum gilvum SL003B-26A1T, a crude RT oil-degrading bacterium from oil-polluted saline soil."; RL J. Bacteriol. 193:2894-2895(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002568; ADZ68720.1; -; Genomic_DNA. DR RefSeq; YP_004302015.1; NC_015259.1. DR EnsemblBacteria; ADZ68720; ADZ68720; SL003B_0284. DR GeneID; 10417629; -. DR KEGG; pgv:SL003B_0284; -. DR PATRIC; 47178350; VBIPolGil182274_0288. DR KO; K03198; -. DR OMA; WAIGHIA; -. DR BioCyc; PGIL991905:GJ0L-286-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9906 MW; E689CA494BC252B8 CRC64; MAAGFEQLDA VPGFSVPVHR ALTEHILLGG APRSIAIMNG TIAGAVGLGL RLWLVGLAIW AIGHFVAVWA ARRDPLFVEV GRRHLRIPGH LAV // ID F2J748_POLGS Unreviewed; 99 AA. AC F2J748; DT 31-MAY-2011, integrated into UniProtKB/TrEMBL. DT 31-MAY-2011, sequence version 1. DT 13-NOV-2013, entry version 10. DE SubName: Full=Conjugal transfer protein; GN OrderedLocusNames=SL003B_p0042; OS Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1). OG Plasmid pSL003B. OC Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum. OX NCBI_TaxID=991905; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=LMG 25793 / CGMCC 1.9160 / SL003B-26A1; PLASMID=pSL003B; RX PubMed=21478361; DOI=10.1128/JB.00333-11; RA Li S.G., Tang Y.Q., Nie Y., Cai M., Wu X.L.; RT "Complete genome sequence of Polymorphum gilvum SL003B-26A1T, a crude RT oil-degrading bacterium from oil-polluted saline soil."; RL J. Bacteriol. 193:2894-2895(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002569; ADZ72803.1; -; Genomic_DNA. DR RefSeq; YP_004301720.1; NC_015258.1. DR EnsemblBacteria; ADZ72803; ADZ72803; SL003B_p0042. DR GeneID; 10415317; -. DR KEGG; pgv:SL003B_p0042; -. DR PATRIC; 47186923; VBIPolGil182274_4518. DR KO; K03198; -. DR OMA; LRMMAKS; -. DR BioCyc; PGIL991905:GJ0L-4440-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 99 AA; 11250 MW; 1608D2B53587AF92 CRC64; MAEAGSRLSR SRVHRALSRP NLLMGADREL VLLTALAAVI LIFVVLTWYA ALFGIAIWLI AVAALRMMAK ADPLMRRVYV RHISYKAFYR ATSSPWRKF // ID F2LFF5_BURGS Unreviewed; 89 AA. AC F2LFF5; DT 31-MAY-2011, integrated into UniProtKB/TrEMBL. DT 31-MAY-2011, sequence version 1. DT 16-OCT-2013, entry version 13. DE SubName: Full=Conjugal transfer protein trbD; GN OrderedLocusNames=bgla_1g24970; OS Burkholderia gladioli (strain BSR3). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia. OX NCBI_TaxID=999541; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BSR3; RX PubMed=21478339; DOI=10.1128/JB.00420-11; RA Seo Y.S., Lim J., Choi B.S., Kim H., Goo E., Lee B., Lim J.S., RA Choi I.Y., Moon J.S., Kim J., Hwang I.; RT "Complete genome sequence of Burkholderia gladioli BSR3."; RL J. Bacteriol. 193:3149-3149(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002599; AEA61121.1; -; Genomic_DNA. DR RefSeq; YP_004361077.1; NC_015381.1. DR EnsemblBacteria; AEA61121; AEA61121; bgla_1g24970. DR GeneID; 10479008; -. DR KEGG; bgd:bgla_1g24970; -. DR PATRIC; 54503244; VBIBurGla188977_6094. DR KO; K03198; -. DR OMA; PGLVLWI; -. DR BioCyc; BGLA999541:GHSQ-2539-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 89 AA; 9530 MW; 208DBD160BD425A3 CRC64; MSTANDLPGF EVPLHRSLTE PILMGGAPRT VAIANGTLSG ALGLGLQLWI PGVALWIVGH SLAVWGARVD PQFMQVFARH LKHKPLLDV // ID F2LSS0_BURGS Unreviewed; 103 AA. AC F2LSS0; DT 31-MAY-2011, integrated into UniProtKB/TrEMBL. DT 31-MAY-2011, sequence version 1. DT 13-NOV-2013, entry version 14. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=bgla_4p0730; OS Burkholderia gladioli (strain BSR3). OG Plasmid bgla_4p. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia. OX NCBI_TaxID=999541; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BSR3; PLASMID=bgla_4p; RX PubMed=21478339; DOI=10.1128/JB.00420-11; RA Seo Y.S., Lim J., Choi B.S., Kim H., Goo E., Lee B., Lim J.S., RA Choi I.Y., Moon J.S., Kim J., Hwang I.; RT "Complete genome sequence of Burkholderia gladioli BSR3."; RL J. Bacteriol. 193:3149-3149(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002604; AEA65866.1; -; Genomic_DNA. DR RefSeq; YP_004362698.1; NC_015383.1. DR EnsemblBacteria; AEA65866; AEA65866; bgla_4p0730. DR GeneID; 10480716; -. DR KEGG; bgd:bgla_4p0730; -. DR PATRIC; 54506690; VBIBurGla188977_7779. DR KO; K03198; -. DR OMA; FRRPYGF; -. DR BioCyc; BGLA999541:GHSQ-7043-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 103 AA; 11732 MW; 3C41DAAB86B28E45 CRC64; MRKPKKVSRS LSLPRQMGGA DRSFAIANGT LTALLCYSST SPIYLVVGVV VHWVLRWLSS SDPWWKEVLV VYNRYPDVHE PLPTADVAAR FRRPYGFDQE LPL // ID F2MZ76_PSEU6 Unreviewed; 90 AA. AC F2MZ76; DT 31-MAY-2011, integrated into UniProtKB/TrEMBL. DT 31-MAY-2011, sequence version 1. DT 29-MAY-2013, entry version 10. DE SubName: Full=Conjugative transfer protein TrbD; GN Name=trbD; OrderedLocusNames=PSTAA_2450; OS Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A). OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. OX NCBI_TaxID=996285; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 4166 / CMT.9.A; RX PubMed=21515765; DOI=10.1128/JB.05039-11; RA Yu H., Yuan M., Lu W., Yang J., Dai S., Li Q., Yang Z., Dong J., RA Sun L., Deng Z., Zhang W., Chen M., Ping S., Han Y., Zhan Y., Yan Y., RA Jin Q., Lin M.; RT "Complete genome sequence of the nitrogen-fixing and rhizosphere- RT associated bacterium Pseudomonas stutzeri strain DSM4166."; RL J. Bacteriol. 193:3422-3423(2011). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DSM 4166; RA Yu H., Yuan M., Yang J., Yan Y., Jin Q., Lin M.; RT "Complete genome sequence of Pseudomonas stutzeri DSM4166."; RL Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002622; AEA84334.1; -; Genomic_DNA. DR RefSeq; YP_005939076.1; NC_017532.1. DR EnsemblBacteria; AEA84334; AEA84334; PSTAA_2450. DR GeneID; 12529594; -. DR KEGG; psr:PSTAA_2450; -. DR PATRIC; 54286660; VBIPseStu183391_2451. DR KO; K03198; -. DR BioCyc; PSTU996285:GLIZ-2453-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 90 AA; 9734 MW; BFD713F904095364 CRC64; MNGERELIPG FEVPLHRSLA EPILLGGAPR NVAILNGTLA AVVGLGLQLW LPGLALWLVG HTLAVWGARL DPQFLQVFAR HIKQPSLLDV // ID F2NT48_TRES6 Unreviewed; 88 AA. AC F2NT48; DT 31-MAY-2011, integrated into UniProtKB/TrEMBL. DT 31-MAY-2011, sequence version 1. DT 29-MAY-2013, entry version 11. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Tresu_1748; OS Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091). OC Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema. OX NCBI_TaxID=869209; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 33096 / DSM 2489 / 6091; RA Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S., RA Peters L., Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G., RA Teshima H., Detter J.C., Tapia R., Han C., Land M., Hauser L., RA Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Gronow S., RA Wellnitz S., Brambilla E., Klenk H.-P., Eisen J.A.; RT "The complete genome of chromosome of Treponema succinifaciens DSM RT 2489."; RL Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002631; AEB14639.1; -; Genomic_DNA. DR RefSeq; YP_004365936.1; NC_015385.1. DR EnsemblBacteria; AEB14639; AEB14639; Tresu_1748. DR GeneID; 10431876; -. DR KEGG; tsu:Tresu_1748; -. DR PATRIC; 54430223; VBITreSuc166698_1831. DR KO; K03198; -. DR BioCyc; TSUC869209:GHSS-1788-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 88 AA; 9971 MW; F203DA4D1D9DD184 CRC64; MENEPTLYDY AVPVHRVLLQ PNVVLGIGIT PAMVILVLTI VLMNLVSVWC FPIGIVLFVA AKILCKDDPY MMTILFDRLM QPNLWRAV // ID F2NYQ7_TRES6 Unreviewed; 87 AA. AC F2NYQ7; DT 31-MAY-2011, integrated into UniProtKB/TrEMBL. DT 31-MAY-2011, sequence version 1. DT 29-MAY-2013, entry version 12. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Tresu_2700; OS Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091). OG Plasmid pTRESU01. OC Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema. OX NCBI_TaxID=869209; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 33096 / DSM 2489 / 6091; RA Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S., RA Peters L., Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G., RA Teshima H., Detter J.C., Tapia R., Han C., Land M., Hauser L., RA Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Gronow S., RA Wellnitz S., Brambilla E., Klenk H.-P., Eisen J.A.; RT "The complete genome of plasmid of Treponema succinifaciens DSM RT 2489."; RL Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002632; AEB15556.1; -; Genomic_DNA. DR RefSeq; YP_004366853.1; NC_015386.1. DR EnsemblBacteria; AEB15556; AEB15556; Tresu_2700. DR GeneID; 10432847; -. DR KEGG; tsu:Tresu_2700; -. DR PATRIC; 54432251; VBITreSuc166698_2826. DR KO; K03198; -. DR BioCyc; TSUC869209:GHSS-2757-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 87 AA; 9835 MW; 201CE0056CAFD6D4 CRC64; MEEISVFDYS TPVHKVLLEP NLLLGIGLTP AMLIMVLTIV LMNIVSIWCV IIGIFLYVIA RMVCKNDPYA LTVLFDRLLA PDVWRAD // ID F2Q656_9BACT Unreviewed; 103 AA. AC F2Q656; DT 31-MAY-2011, integrated into UniProtKB/TrEMBL. DT 31-MAY-2011, sequence version 1. DT 13-NOV-2013, entry version 5. DE SubName: Full=TrbD protein; GN Name=trbD; OS uncultured bacterium pMCBF6. OG Plasmid pMCBF6. OC Bacteria; environmental samples. OX NCBI_TaxID=429581; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pMCBF6; RX PubMed=21468020; RA Norberg P., Bergstrom M., Jethava V., Dubhashi D., Hermansson M.; RT "The IncP-1 plasmid backbone adapts to different host bacterial RT species and evolves through homologous recombination."; RL Nat. Commun. 2:268-268(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EF107516; ABO36547.1; -; Genomic_DNA. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11811 MW; 4DBDF05E06171F53 CRC64; MALRTIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QELRATVFGI ALWFGALFAL RLMAKADAKL RHVYLRHRRY KAYYPARSTP FRDNTNSQGK QYK // ID F3F3S2_9PSED Unreviewed; 917 AA. AC F3F3S2; DT 28-JUN-2011, integrated into UniProtKB/TrEMBL. DT 28-JUN-2011, sequence version 1. DT 16-APR-2014, entry version 7. DE SubName: Full=Putative conjugal transfer protein TriC; GN ORFNames=PSYMO_26759; OS Pseudomonas syringae pv. mori str. 301020. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas; Pseudomonas amygdali. OX NCBI_TaxID=629261; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=301020; RX PubMed=21799664; DOI=10.1371/journal.ppat.1002132; RA Baltrus D.A., Nishimura M.T., Romanchuk A., Chang J.H., Mukhtar M.S., RA Cherkis K., Roach J., Grant S.R., Jones C.D., Dangl J.L.; RT "Dynamic evolution of pathogenicity revealed by sequencing and RT comparative genomics of 19 Pseudomonas syringae isolates."; RL PLoS Pathog. 7:E1002132-E1002132(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEAG01001056; EGH24858.1; -; Genomic_DNA. DR EnsemblBacteria; EGH24858; EGH24858; PSYMO_26759. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 917 AA; 103341 MW; A01F90069C0079D8 CRC64; MYCGVPVGLF FVVVAFLFLI GMYTTKLFWL MIPIAVYALS VPTKKDEFHY NLVYLKLRSR FNKHTAGRLK LPTMDSFSGH FFKTPAILAN QYDAVDVQEF MTQMKLNERT PFENIIPYSS HVSDHIVKTK DGDLVATWQV LGTAFEFESD DSLARTTETV NTLIKSFAGY PVTFYVHNAR ESFYDSFSSD SGNAFADTVS RLYYEGIEKD TFKANTLYLT MAYKPFGKLD RADNKRLDLA QKRQVLDNSI AEMEEFRGRL GSALSRYTAY PLGCFEENGV VYSSQVSFYN FLISGVRQKI RMTKTPLYEL LGSKDVFFGP ETGQMSSHQH TRFFRSLEIK DFSSRGIVNG ILNVLLYADV EYVMTQSFTL MSKAEALKHI SSVAKKLKSV DDDALSQQAE LVQAKDDVTS GVVSFGKYHF TLFVYADSVE KLVRDTNKLI TGFTDIGLIM TLSKESLAPA FCAQLPGIYH LRPRLAPISS ANFAELASFH NFYTGKRNKT PWGEAIAILK TPSKQAYYLN AHNVDFFADD FDEKTLANLL VLGTAGVGKT MTLSFILNML QKYAKPESFS PSAKTKKLTT VFFDKDRGAE INIRALGGEY YAVKTGEPTG WNPFYLPKNK RNLAMVKSLI KLLVTRNSEN ITSLDEKTIS ESVNAVFDME PIENRQYGIT RMLEHMSEAA TEAGRNNGLV ARLSLWAQGG PFGWVFDNAV DTFNPDISST FGIDGTEFLD DNDTCTPISF YLLYRVTQLL DGRRMVIFLD EFWKWLGDIA FKDFVYNKLK TIRKLNGFVV PATQSPDEVI KSDIARAVIE VCSTAFYLAN PNAVYAHYVD ELGVTPEAYW IIKKLDPGSR QMVVRKSSLK EGDNTDFYAL VTLDLSGLGV YTKVLSSSAP NLEIFDSLFK DGMKPDEWLD AYLKIAI // ID F3J6Y6_PSEAP Unreviewed; 77 AA. AC F3J6Y6; DT 28-JUN-2011, integrated into UniProtKB/TrEMBL. DT 28-JUN-2011, sequence version 1. DT 19-MAR-2014, entry version 4. DE SubName: Full=Conjugal transfer protein TrbD; DE Flags: Fragment; GN ORFNames=PSYAP_26444; OS Pseudomonas syringae pv. aptata str. DSM 50252. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas; Pseudomonas syringae. OX NCBI_TaxID=629268; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DSM 50252; RX PubMed=21799664; DOI=10.1371/journal.ppat.1002132; RA Baltrus D.A., Nishimura M.T., Romanchuk A., Chang J.H., Mukhtar M.S., RA Cherkis K., Roach J., Grant S.R., Jones C.D., Dangl J.L.; RT "Dynamic evolution of pathogenicity revealed by sequencing and RT comparative genomics of 19 Pseudomonas syringae isolates."; RL PLoS Pathog. 7:E1002132-E1002132(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEAN01001129; EGH80162.1; -; Genomic_DNA. DR EnsemblBacteria; EGH80162; EGH80162; PSYAP_26444. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; FT NON_TER 77 77 SQ SEQUENCE 77 AA; 8756 MW; A67731AC73E9D61C CRC64; MALRKIPIRR AGNRHNLFMG GDRELVMFSG LLAAILIFAA QDWLAFFAGI TMWSGALWAL RRMGKADPMM RAVYLRN // ID F3Q326_9ENTR Unreviewed; 912 AA. AC F3Q326; DT 28-JUN-2011, integrated into UniProtKB/TrEMBL. DT 28-JUN-2011, sequence version 1. DT 16-APR-2014, entry version 7. DE SubName: Full=Type IV secretion/conjugal transfer ATPase, VirB4 family; GN ORFNames=HMPREF9538_01468; OS Klebsiella sp. MS 92-3. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Klebsiella. OX NCBI_TaxID=749535; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MS 92-3; RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., RA Courtney L., Fronick C., Harrison M., Strong C., Farmer C., RA Delahaunty K., Markovic C., Hall O., Minx P., Tomlinson C., RA Mitreva M., Hou S., Chen J., Wollam A., Pepin K.H., Johnson M., RA Bhonagiri V., Zhang X., Suruliraj S., Warren W., Chinwalla A., RA Mardis E.R., Wilson R.K.; RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFBO01000189; EGF64081.1; -; Genomic_DNA. DR EnsemblBacteria; EGF64081; EGF64081; HMPREF9538_01468. DR PATRIC; 55028475; VBIKleSp165603_1252. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 912 AA; 103068 MW; 618CD458613EA287 CRC64; MAKLLKAMKR PAALWGVPMV PLLAVTGVTI IVAIWTSVAL LFLLPVQFLV MKSLTRNEPM RFNLIAVWLR AKGKPVANRL FGATTFMPVE HDDVDIKEFL DAMKLNQCAT IKKYIPYSSH IHQHVVRSPK SDLYCTWELM GTPFDCESDE SLQFGTNQLH GLIRSFEGMP VTFYIHNDRN TFTDNLHKDS GNPYADEVSR LYYASVGLFR RNRLFLTVCY RPFVSLEKAE RKRMKDSQKL KELDGALLEM LEIKSTLDTA LSRYGARPLG TFTEGNAVFS SQLAFYEYLL THQWRKVRVT RTPAYDVMGA AALFFSAESG QINHANGTQY FRGLEVKEFA EETATGMMDS LLYAPCDYVI TQSYTCMSRE EAKKAIKRTR RLLMSADDDA VSQRLDLDVA LDLLTSGKIA YGKHHFSIMV YSPSLESLVA DTNEISNALN NIGITPVPAE ISLSAAYMAQ LPGNYNLRPR KGELSSQNFV ELAALHNFYP GKRDKAPWGD AMALLRTPSG DGYYINLHNT LADKDEFNEK NPASTCILGT NGSGKTMLMT FFEIMQQKYG REDSFSPDAK TKRLTTVYLD KDRGAEMNIR ALGGRYYRVI SGESTGWNPF SLPATKRNIN FIKQLMKILC TRNGSTISPR DERRLSDAVN AVMNDEPQYR VYGITRMLEN LPEPATKEAQ ENGLSIRLSQ WAQGGEFGWV FDNESDTFDI SNCDNFGIDG TEFLDDASVC APISFYLLYR ITSLLDGRRL VIFMDEFWKW LRDPVFKDFA YNKLKTIRKL NGMLVVGTQS PAEIIKDDIA PAVIEQCGTQ ILAANPNADR AHYVDGMKFE PEVFDVVKGL DPQARQYVVV KNQFKRGDTK RFAARVTLDL SGIGRYTKVM SGDAPNLEIF ESIYREGMQP HEWLDTYLAK AL // ID F3QKK3_9BURK Unreviewed; 120 AA. AC F3QKK3; DT 28-JUN-2011, integrated into UniProtKB/TrEMBL. DT 28-JUN-2011, sequence version 1. DT 26-JUN-2013, entry version 3. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=HMPREF9439_01463; OS Parasutterella excrementihominis YIT 11859. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Sutterellaceae; Parasutterella. OX NCBI_TaxID=762966; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=YIT 11859; RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., RA Courtney L., Fronick C., Harrison M., Strong C., Farmer C., RA Delahaunty K., Markovic C., Hall O., Minx P., Tomlinson C., RA Mitreva M., Hou S., Chen J., Wollam A., Pepin K.H., Johnson M., RA Bhonagiri V., Zhang X., Suruliraj S., Warren W., Chinwalla A., RA Mardis E.R., Wilson R.K.; RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFBP01000038; EGG54482.1; -; Genomic_DNA. DR EnsemblBacteria; EGG54482; EGG54482; HMPREF9439_01463. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 120 AA; 14053 MW; 946334A959865C59 CRC64; MYPEPIYKAL ARQPLYLGIP LIPLLLVGIT GFSLALLIYM PAVVFVFLIL YVMRSLCEKD EQLFHQLYLY WLLNYKSFPN RAYWKSVISF APNVKEKEIP LLISRADQTF LASKELNQYD // ID F3QMZ4_9BURK Unreviewed; 119 AA. AC F3QMZ4; DT 28-JUN-2011, integrated into UniProtKB/TrEMBL. DT 28-JUN-2011, sequence version 1. DT 26-JUN-2013, entry version 3. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=HMPREF9439_02324; OS Parasutterella excrementihominis YIT 11859. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Sutterellaceae; Parasutterella. OX NCBI_TaxID=762966; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=YIT 11859; RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., RA Courtney L., Fronick C., Harrison M., Strong C., Farmer C., RA Delahaunty K., Markovic C., Hall O., Minx P., Tomlinson C., RA Mitreva M., Hou S., Chen J., Wollam A., Pepin K.H., Johnson M., RA Bhonagiri V., Zhang X., Suruliraj S., Warren W., Chinwalla A., RA Mardis E.R., Wilson R.K.; RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFBP01000089; EGG51226.1; -; Genomic_DNA. DR EnsemblBacteria; EGG51226; EGG51226; HMPREF9439_02324. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 119 AA; 13701 MW; 049B94F2D70F2733 CRC64; MPDPVTQIET APLFKGATRP ACILGVPTET FVITVLTGMV ISLLFWPPLM LLIPIPVWIF KRITDRDDQV LYQWGIYFRT MIQNNPNRLV WRNSLSLSSS NRTQRVILCP SDFSIKDHK // ID F3S433_9PROT Unreviewed; 92 AA. AC F3S433; DT 28-JUN-2011, integrated into UniProtKB/TrEMBL. DT 28-JUN-2011, sequence version 1. DT 19-MAR-2014, entry version 6. DE SubName: Full=Putative conjugal transfer protein TrbD; GN Name=trbD; ORFNames=SXCC_00842; OS Gluconacetobacter sp. SXCC-1. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Acetobacteraceae; Gluconacetobacter. OX NCBI_TaxID=1004836; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=SXCC-1; RX PubMed=21551293; DOI=10.1128/JB.05147-11; RA Du X.J., Jia S.R., Yang Y., Wang S.; RT "Genome sequence of Gluconacetobacter sp. strain SXCC-1, isolated from RT Chinese vinegar fermentation starter."; RL J. Bacteriol. 193:3395-3396(2011). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=SXCC-1; RA Du X., Jia S., Yang Y., Wang S.; RL Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFCH01000028; EGG78567.1; -; Genomic_DNA. DR EnsemblBacteria; EGG78567; EGG78567; SXCC_00842. DR PATRIC; 55057018; VBIGluSp188091_0575. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 92 AA; 9923 MW; 63A2ABDF0A68C973 CRC64; MAAGYDDDAV PGFHVPVHRS LTDPILLGGA PRTLAIANGT LGAAISLGLR LWLVGAVFWI VGHGLAVWGA KRDPQFVEVG RRHLRYPAWL RS // ID F3S7F3_9PROT Unreviewed; 92 AA. AC F3S7F3; DT 28-JUN-2011, integrated into UniProtKB/TrEMBL. DT 28-JUN-2011, sequence version 1. DT 19-MAR-2014, entry version 6. DE SubName: Full=Putative conjugal transfer protein TrbD; GN Name=trbD; ORFNames=SXCC_01977; OS Gluconacetobacter sp. SXCC-1. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Acetobacteraceae; Gluconacetobacter. OX NCBI_TaxID=1004836; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=SXCC-1; RX PubMed=21551293; DOI=10.1128/JB.05147-11; RA Du X.J., Jia S.R., Yang Y., Wang S.; RT "Genome sequence of Gluconacetobacter sp. strain SXCC-1, isolated from RT Chinese vinegar fermentation starter."; RL J. Bacteriol. 193:3395-3396(2011). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=SXCC-1; RA Du X., Jia S., Yang Y., Wang S.; RL Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFCH01000034; EGG77587.1; -; Genomic_DNA. DR EnsemblBacteria; EGG77587; EGG77587; SXCC_01977. DR PATRIC; 55058975; VBIGluSp188091_1520. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 92 AA; 9860 MW; 158D321E5592E417 CRC64; MAVGYDDDAV PGFHVPVHRS LTDPILLGGA PRAVAIANGT LAAAIALGLR LWLIGAAFWI VGHGLAVWGA KRDPVFIEVG RRHLRYPAWL RA // ID F3X045_9SPHN Unreviewed; 93 AA. AC F3X045; DT 28-JUN-2011, integrated into UniProtKB/TrEMBL. DT 28-JUN-2011, sequence version 1. DT 19-MAR-2014, entry version 5. DE SubName: Full=Type IV secretory pathway, VirB3-like family protein; GN ORFNames=SUS17_2813; OS Sphingomonas sp. S17. OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Sphingomonas. OX NCBI_TaxID=1007104; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=S17; RX PubMed=21602338; DOI=10.1128/JB.05225-11; RA Farias M.E., Revale S., Mancini E., Ordonez O., Turjanski A., RA Cortez N., Vazquez M.P.; RT "Genome sequence of Sphingomonas sp. S17, isolated from an alkaline, RT hyperarsenic, and hypersaline volcano-associated lake at high altitude RT in the Argentinean Puna."; RL J. Bacteriol. 193:3686-3687(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFGG01000015; EGI54347.1; -; Genomic_DNA. DR EnsemblBacteria; EGI54347; EGI54347; SUS17_2813. DR PATRIC; 53860021; VBISphSp187231_2711. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 93 AA; 10002 MW; 322F6D788F5BCCBE CRC64; MTGAADPVEP IAGYFAPVHR ALTEPILLGG APRSLAIVNG TLAGAIGLGL RLWIAGLVIW AIGHALSVWA ARRDPQFVDV ARRHLRYPAW MRP // ID F4DZA4_PSEMN Unreviewed; 90 AA. AC F4DZA4; DT 28-JUN-2011, integrated into UniProtKB/TrEMBL. DT 28-JUN-2011, sequence version 1. DT 14-MAY-2014, entry version 14. DE SubName: Full=Putative conjugal transfer TrbD transmembrane protein; GN OrderedLocusNames=MDS_2903; OS Pseudomonas mendocina (strain NK-01). OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. OX NCBI_TaxID=1001585; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NK-01; RX PubMed=21551299; DOI=10.1128/JB.05068-11; RA Guo W., Wang Y., Song C., Yang C., Li Q., Li B., Su W., Sun X., RA Song D., Yang X., Wang S.; RT "Complete genome of Pseudomonas mendocina NK-01, which synthesizes RT medium-chain-length polyhydroxyalkanoates and alginate RT oligosaccharides."; RL J. Bacteriol. 193:3413-3414(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002620; AEB58934.1; -; Genomic_DNA. DR RefSeq; YP_004380686.1; NC_015410.1. DR EnsemblBacteria; AEB58934; AEB58934; MDS_2903. DR GeneID; 10457685; -. DR KEGG; pmk:MDS_2903; -. DR PATRIC; 54486507; VBIPseMen187712_2948. DR KO; K03198; -. DR OMA; AVWATKR; -. DR BioCyc; PMEN1001585:GIWS-2941-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 90 AA; 9730 MW; BFD713F901A92464 CRC64; MNGERELIPG FEVPLHRSLA EPILLGGAPR NVAILNGTLA AVVGLGLQLW LPGLALWLVG HSLAVWGARL DPQFLQVFAR HIKQPPLLDV // ID F4GG92_ALIDK Unreviewed; 90 AA. AC F4GG92; DT 28-JUN-2011, integrated into UniProtKB/TrEMBL. DT 28-JUN-2011, sequence version 1. DT 29-MAY-2013, entry version 11. DE SubName: Full=Conjugal transfer protein; GN OrderedLocusNames=Alide2_1570; OS Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Alicycliphilus. OX NCBI_TaxID=596154; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 14773 / CIP 107495 / K601; RG US DOE Joint Genome Institute; RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., RA Peters L., Zeytun A., Detter J.C., Han C., Tapia R., Land M., RA Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., RA Oosterkamp M., Pieper D., van Berkel W., Langenhoff A., Smidt H., RA Stams A., Woyke T.; RT "Complete sequence of chromosome of Alicycliphilus denitrificans RT K601."; RL Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002657; AEB83962.1; -; Genomic_DNA. DR RefSeq; YP_004387478.1; NC_015422.1. DR EnsemblBacteria; AEB83962; AEB83962; Alide2_1570. DR GeneID; 10482606; -. DR KEGG; adk:Alide2_1570; -. DR PATRIC; 54525781; VBIAliDen79014_1592. DR KO; K03198; -. DR BioCyc; ADEN596154:GHU6-1590-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 90 AA; 9663 MW; D390675A3C91674E CRC64; MSAPDTFADG FEVPLHRSLT EPILLGGAPR TVAIANGTLA AAVGLGLQLW IPGVVFWIVG HSLAVWGARV DPQFMAVFAR HIRHRPLLDV // ID F4GML7_PUSST Unreviewed; 106 AA. AC F4GML7; DT 28-JUN-2011, integrated into UniProtKB/TrEMBL. DT 28-JUN-2011, sequence version 1. DT 03-APR-2013, entry version 13. DE SubName: Full=Type IV secretion system protein VirB3; GN OrderedLocusNames=PT7_1771; OS Pusillimonas sp. (strain T7-7). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Alcaligenaceae; Pusillimonas. OX NCBI_TaxID=1007105; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=T7-7; RX PubMed=21622753; DOI=10.1128/JB.05242-11; RA Cao B., Ma T., Ren Y., Ren Y., Li G., Li P., Guo X., Ding P., Feng L.; RT "Complete genome sequence of Pusillimonas sp. T7-7, a cold-tolerant RT diesel oil-degrading bacterium isolated from the Bohai Sea in China."; RL J. Bacteriol. 193:4021-4022(2011). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=T7-7; RA Cao B., Ma T., Li P., Jiang L., Li Y., Guo X., Feng L.; RT "Genome Announcement Complete Genome Sequence of Pusillimonas sp. T7- RT 7, a novel species isolated from the Bohai Sea, China."; RL Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002663; AEC20311.1; -; Genomic_DNA. DR RefSeq; YP_004416935.1; NC_015458.1. DR EnsemblBacteria; AEC20311; AEC20311; PT7_1771. DR GeneID; 10603708; -. DR KEGG; put:PT7_1771; -. DR PATRIC; 54557810; VBIPusSp189076_1746. DR KO; K03198; -. DR OMA; FTCVAIV; -. DR BioCyc; PSP1007105:GJAF-1797-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 106 AA; 12208 MW; B2E89BC654D30D65 CRC64; MATNTYPVFR GLGRKATFMG VPTKLLLGAF TCVAIVAMTA GLAWWGLLFI VIPTLAILTR DDDKALDVLW LELKTRRRNR NQRFWQGSSY ALQGYHRRRP WRALIK // ID F4LG61_BORPC Unreviewed; 104 AA. AC F4LG61; DT 28-JUN-2011, integrated into UniProtKB/TrEMBL. DT 28-JUN-2011, sequence version 1. DT 14-MAY-2014, entry version 13. DE SubName: Full=Toxin transport protein; GN Name=ptlB; OrderedLocusNames=BPTD_3732; OS Bordetella pertussis (strain CS). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Alcaligenaceae; Bordetella. OX NCBI_TaxID=1017264; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CS; RX PubMed=21622744; DOI=10.1128/JB.05184-11; RA Zhang S., Xu Y., Zhou Z., Wang S., Yang R., Wang J., Wang L.; RT "Complete genome sequence of B. pertussis CS, Chinese pertussis RT vaccine strain."; RL J. Bacteriol. 193:4017-4018(2011). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=CS; RA Zhang S., Xu Y., Zhou Z., Wang S., Yang R., Wang J., Wang L.; RT "Complete genome sequence of B. pertussis CS, Chinese pertussis RT vaccine strain."; RL Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002695; AEE68902.1; -; Genomic_DNA. DR RefSeq; YP_005591680.1; NC_017223.1. DR EnsemblBacteria; AEE68902; AEE68902; BPTD_3732. DR GeneID; 12162593; -. DR KEGG; bpc:BPTD_3732; -. DR PATRIC; 54334865; VBIBorPer192275_4001. DR KO; K03198; -. DR OMA; FWGASSY; -. DR BioCyc; BPER1017264:GL9D-3790-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 104 AA; 12312 MW; 581DD0CA8173B4B4 CRC64; MRDPLFKGCT RPAMLMGVPA TPLAVCSGTI ALLGIWFSIA FLALFPVALL AMRIMIRRDD QQFRLIWLYL RMRWLSRDRT HAFWQSTVYA PLRYAERRRR LRKP // ID F4QNF7_9CAUL Unreviewed; 94 AA. AC F4QNF7; DT 28-JUN-2011, integrated into UniProtKB/TrEMBL. DT 28-JUN-2011, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=ABI_22770; OS Asticcacaulis biprosthecum C19. OC Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; OC Caulobacteraceae; Asticcacaulis. OX NCBI_TaxID=715226; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=C19; RA Brown P.J.B., Buechlein A., Hemmerich C., Brun Y.V.; RL Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL883078; EGF90865.1; -; Genomic_DNA. DR EnsemblBacteria; EGF90865; EGF90865; ABI_22770. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 94 AA; 10845 MW; 7092764C3EAD767A CRC64; MSELIKSTVF KALTQPQMFA GVTYSYFIIN AVVTTEAFLI TRSFWAFAVA FVVHAIGYLA CLREPRVFDL WLTKVSRCPR VRNYARWGCN SYHP // ID F4QXD2_BREDI Unreviewed; 90 AA. AC F4QXD2; DT 28-JUN-2011, integrated into UniProtKB/TrEMBL. DT 28-JUN-2011, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=BDIM_13220; OS Brevundimonas diminuta ATCC 11568. OC Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; OC Caulobacteraceae; Brevundimonas. OX NCBI_TaxID=751586; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 11568; RA Brown P.J.B., Buechlein A., Hemmerich C., Brun Y.V.; RT "Draft genome sequence of Brevundimonas diminuta."; RL Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL883086; EGF94498.1; -; Genomic_DNA. DR EnsemblBacteria; EGF94498; EGF94498; BDIM_13220. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 90 AA; 9785 MW; 9729E4252ED1755F CRC64; MAGASDHPEG WTLPVAQALA TPVLMAGMPR EYAIAMGTIA LVLGLALRIW WLGLLWWACA HAVGLWAARS DARFFDVLRR HLALPGHLDA // ID F4QYV0_BREDI Unreviewed; 85 AA. AC F4QYV0; DT 28-JUN-2011, integrated into UniProtKB/TrEMBL. DT 28-JUN-2011, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Conjugal transfer protein TrbB; GN ORFNames=BDIM_15490; OS Brevundimonas diminuta ATCC 11568. OC Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; OC Caulobacteraceae; Brevundimonas. OX NCBI_TaxID=751586; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 11568; RA Brown P.J.B., Buechlein A., Hemmerich C., Brun Y.V.; RT "Draft genome sequence of Brevundimonas diminuta."; RL Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL883086; EGF94721.1; -; Genomic_DNA. DR EnsemblBacteria; EGF94721; EGF94721; BDIM_15490. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 85 AA; 9080 MW; A627F15057E5A855 CRC64; MNVEGFEVPL HRALTEPILL GGAPRGVAIL NGTLAAAIGL GLQQWVAGLI IWLVGHSLAV FAAKRDPDFA AVGVRHLRQK GWWSC // ID F4T8R9_ECOLX Unreviewed; 914 AA. AC F4T8R9; DT 28-JUN-2011, integrated into UniProtKB/TrEMBL. DT 28-JUN-2011, sequence version 1. DT 16-APR-2014, entry version 8. DE SubName: Full=Type IV secretory pathway VirB4 component; GN ORFNames=ECIG_05476; OS Escherichia coli M605. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=656417; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=M605; RG The Broad Institute Genome Sequencing Platform; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Feldgarden M., Gordon D.M., Johnson J.R., Johnston B.D., Young S., RA Zeng Q., Koehrsen M., Alvarado L., Berlin A.M., Borenstein D., RA Chapman S.B., Chen Z., Engels R., Freedman E., Gellesch M., RA Goldberg J., Griggs A., Gujja S., Heilman E.R., Heiman D.I., RA Hepburn T.A., Howarth C., Jen D., Larson L., Lewis B., Mehta T., RA Park D., Pearson M., Richards J., Roberts A., Saif S., Shea T.D., RA Shenoy N., Sisk P., Stolte C., Sykes S.N., Walk T., White J., RA Yandava C., Haas B., Henn M.R., Nusbaum C., Birren B.; RT "The Genome Sequence of Escherichia coli M605."; RL Submitted (JAN-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL883935; EGI12730.1; -; Genomic_DNA. DR EnsemblBacteria; EGI12730; EGI12730; ECIG_05476. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 914 AA; 103357 MW; DCBF8F4F9AA2898B CRC64; MAKLLKAMKR PAALWGVPMV PLLTVVGVTI IVAIWTSIAL LLFLPIEFLV MKSLTRNEPL RFNLIAVWLR VRGNPVANRL FGATAFMPVE HNAVDIQEFI DAMKLNQCAT IKKYIPYSSH IHPNVVRSLN SDFFCTWELT GTPFDCESDE TLQFGTNQLH GLIRSFEGFP VTFYVHNSRE QFTDSLHKVS GNPYADTVSE RYYASLNKRP FRRNRLFVTI CYRPFASLDK ANRKRMKDGQ KLKEIDSALL EVLEIKSTLD TALSRYGAHA LGTFTENEAV FSSQLAFYEY LLTHQWRKVR VTRTPAYNVM GNVALYFSAE SGQINHVNGT QYFRGLEVKE FSEETATGMT DSLLYAPCDY VITQSYTCMS REEAKKAIKR TRRLMMSADD DAVSQRLDLD VALDLLTSGK IAYGKHHLSI MVFSPSLESL IADTNEISNA LNNIGITPVP AEISLSAAYM AQLPGNYNLR PRAGELSSLN FVELASLHNF YPGKRDKAPW GDAMALVRTP SGDGYYLNLH NTLADKDEFN EKNPASTCIL GTNGSGKTML MTFLQINQQK YNRDDSFSPD AKTKRLTTVY LDKDRGAEIN IRALGGKYYR VFSGEPTGWN PFALPATKRN INFIKQLMKI LCTRNGATIT PRDERRLNDA VNAVMSDEPQ YRVYGITRML ENLPEPATRE AQENGLSIRL SQWARGGEFG WVFDNEHDTF DISNCDNFGI DGTEFLDDPN VCAPISFYLL YRITSLLDGR RLVIFMDEFW KWLRDPVFKD FAYNKLKTIR KLNGMLVVGT QSPAEIIKDE IAPAVIEQCG TQILAANPSA DRSHYVDGMK FEPEVFDVIK GLDPQARQYV VVKNQFRRGD TKRFAARITL DLSGIGRYTK VMSGDAPNLE IFESLYQEGM KPSDWLDSYL AKAL // ID F4TWS6_ECOLX Unreviewed; 520 AA. AC F4TWS6; DT 28-JUN-2011, integrated into UniProtKB/TrEMBL. DT 28-JUN-2011, sequence version 1. DT 11-DEC-2013, entry version 6. DE SubName: Full=Type IV secretory pathway VirB4 component; GN ORFNames=ECKG_02619; OS Escherichia coli TA206. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=656440; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=TA206; RG The Broad Institute Genome Sequencing Platform; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Feldgarden M., Gordon D.M., Johnson J.R., Johnston B.D., Young S., RA Zeng Q., Koehrsen M., Alvarado L., Berlin A.M., Borenstein D., RA Chapman S.B., Chen Z., Engels R., Freedman E., Gellesch M., RA Goldberg J., Griggs A., Gujja S., Heilman E.R., Heiman D.I., RA Hepburn T.A., Howarth C., Jen D., Larson L., Lewis B., Mehta T., RA Park D., Pearson M., Richards J., Roberts A., Saif S., Shea T.D., RA Shenoy N., Sisk P., Stolte C., Sykes S.N., Walk T., White J., RA Yandava C., Haas B., Henn M.R., Nusbaum C., Birren B.; RT "The Genome Sequence of Escherichia coli TA206."; RL Submitted (JAN-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GL884188; EGI25722.1; -; Genomic_DNA. DR EnsemblBacteria; EGI25722; EGI25722; ECKG_02619. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 520 AA; 58998 MW; 68050A5161CFD99C CRC64; MAKLLKAMKR PAALWGVPMV PLLAVTGVTI IVAVWTSVAL LFLLPVQFLV MKSLTRNEPM RFNLIAVWLR AKGKPVANRL FGATTFMPVE HDHVDIKEFL DAMKLNQCAT IRKYIPYSSH IHQHVVRSPK SDLYCTWELM GTPFDCESDE TLQFGTNQLH GLIRSFEGMP VTFYVHNCRE QFTDSLHKIT GNAYADTISK LYYTSLAKRP FRRNRLFLTV CYRPFVSLEK AERKRMKDSQ KLKELDSALL EMLEIKSTLD TALSRYGARP LGTFTERNAV FSSQLAFYEY LLTHQWRKVR VTRTPAYEVM GTAALFFSAE SGQINHASGT QFFRGLEIKE FSEETATGMM DSLLYAPCDY VITQSYTCMS REEAKKAIKR TRRLLMSADD DAVSQRLDLD VALDLLTSGK LAYGQHHFSI MVYSPSLESL VADTNEISNA LNNIGITPVP AEISLSAAYM AQLPGNYNLR PRKGELSSQN FVELAALHNF YPGKRDKAPW GDAMALLRTP SRRWLLYQPA // ID F4Y9F8_9RHIZ Unreviewed; 107 AA. AC F4Y9F8; DT 28-JUN-2011, integrated into UniProtKB/TrEMBL. DT 28-JUN-2011, sequence version 1. DT 13-NOV-2013, entry version 4. DE SubName: Full=VblB3 protein; GN Name=vblB3; OS Bartonella sp. TT0105. OG Plasmid pTT0105. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=596995; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=TT0105; PLASMID=pTT0105; RA Ji D.-D., Lee J.-L.; RT "Identification of a novel type four secretion system on plasmid RT pTT0105 from Bartonella spp. in Taiwan."; RL Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; GU173851; ADN97092.1; -; Genomic_DNA. DR RefSeq; YP_006961057.1; NC_019248.1. DR GeneID; 13917779; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 107 AA; 12066 MW; CF7FDA96F19E565E CRC64; MKEHGKLTED TLFLACTRPA MIAGVTVEAM GLNAIGTMIL FIMTGNIFLV TIGIAMHFIF KEILKHDHNK FRILLTWQKT TIFARNSSLW GGGSVSPLRL IRNYEEL // ID F5JAB1_9RHIZ Unreviewed; 76 AA. AC F5JAB1; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 19-MAR-2014, entry version 5. DE SubName: Full=Uncharacterized protein; GN ORFNames=AGRO_2117; OS Agrobacterium sp. ATCC 31749. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium. OX NCBI_TaxID=82789; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 31749; RX PubMed=21685288; DOI=10.1128/JB.05302-11; RA Ruffing A.M., Castro-Melchor M., Hu W.S., Chen R.R.; RT "Genome sequence of the curdlan-producing Agrobacterium sp. strain RT ATCC 31749."; RL J. Bacteriol. 193:4294-4295(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AECL01000031; EGL65172.1; -; Genomic_DNA. DR EnsemblBacteria; EGL65172; EGL65172; AGRO_2117. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 76 AA; 8692 MW; 4CACC8053E396431 CRC64; MGADRELVLV TALAAVILIF VVLTWYAALF GIAIWLVAVG ALRMMAKADP LMRRVYIRHI SYKTFYRATS SPWRKF // ID F5L1Z7_9FIRM Unreviewed; 80 AA. AC F5L1Z7; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=HMPREF9323_1967; OS Veillonella parvula ACS-068-V-Sch12. OC Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; OC Veillonella. OX NCBI_TaxID=768727; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ACS-068-V-Sch12; RA Durkin A.S., Madupu R., Torralba M., Gillis M., Methe B., Sutton G., RA Nelson K.E.; RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEXI01000020; EGL76765.1; -; Genomic_DNA. DR EnsemblBacteria; EGL76765; EGL76765; HMPREF9323_1967. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 80 AA; 9260 MW; CFF3DD9CF6987A85 CRC64; MKIKVYKSLY KPPVIAGISR KAFGSLLMAT FMSVAVFRSP EALLPVIVIY FILRWCMKKD NHLLNILQRN LQLKDAYTKD // ID F5RNM8_9FIRM Unreviewed; 93 AA. AC F5RNM8; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 13-NOV-2013, entry version 4. DE SubName: Full=Uncharacterized protein; GN ORFNames=HMPREF9081_1864; OS Centipeda periodontii DSM 2778. OC Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; OC Centipeda. OX NCBI_TaxID=888060; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DSM 2778; RA Muzny D., Qin X., Deng J., Jiang H., Liu Y., Qu J., Song X.-Z., RA Zhang L., Thornton R., Coyle M., Francisco L., Jackson L., Javaid M., RA Korchina V., Kovar C., Mata R., Mathew T., Ngo R., Nguyen L., RA Nguyen N., Okwuonu G., Ongeri F., Pham C., Simmons D., RA Wilczek-Boney K., Hale W., Jakkamsetti A., Pham P., Ruth R., RA San Lucas F., Warren J., Zhang J., Zhao Z., Zhou C., Zhu D., Lee S., RA Bess C., Blankenburg K., Forbes L., Fu Q., Gubbala S., Hirani K., RA Jayaseelan J.C., Lara F., Munidasa M., Palculict T., Patil S., RA Pu L.-L., Saada N., Tang L., Weissenberger G., Zhu Y., Hemphill L., RA Shang Y., Youmans B., Ayvaz T., Ross M., Santibanez J., Aqrawi P., RA Gross S., Joshi V., Fowler G., Nazareth L., Reid J., Worley K., RA Petrosino J., Highlander S., Gibbs R.; RL Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFHQ01000043; EGK58639.1; -; Genomic_DNA. DR EnsemblBacteria; EGK58639; EGK58639; HMPREF9081_1864. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 93 AA; 11049 MW; F10DE17F87ABDB5C CRC64; MDENKNVQGA SWIHLPIYRS LTEYILFMDV PRSCIVWNVG AALLILLTLG LSYWYVLSVN VVVHFAVRYF SMEDAQFFEC FSRYWSKRDY YST // ID F6AAP6_PSEF1 Unreviewed; 90 AA. AC F6AAP6; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 14-MAY-2014, entry version 12. DE SubName: Full=Putative conjugal transfer TrbD transmembrane protein; GN OrderedLocusNames=Psefu_2128; OS Pseudomonas fulva (strain 12-X). OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. OX NCBI_TaxID=743720; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=12-X; RG US DOE Joint Genome Institute; RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., RA Peters L., Mikhailova N., Pagani I., Davenport K., Han C., Tapia R., RA Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Lcollab F.I., RA Woyke T.; RT "Complete sequence of Pseudomonas fulva 12-X."; RL Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002727; AEF22099.1; -; Genomic_DNA. DR RefSeq; YP_004474193.1; NC_015556.1. DR EnsemblBacteria; AEF22099; AEF22099; Psefu_2128. DR GeneID; 10654781; -. DR KEGG; pfv:Psefu_2128; -. DR KO; K03198; -. DR OMA; PGLVLWI; -. DR BioCyc; PFUL743720:GHQV-2158-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 90 AA; 9705 MW; 1ED602F902A38F15 CRC64; MNGERDLIPG FEVPLHRSLA EPILLGGAPR NVAILNGTLA AVVGLGLQLW LPGLALWLVG HSLAVWGARL DPQFLQVFAR HIKQPSLLDV // ID F6BY38_SINMB Unreviewed; 108 AA. AC F6BY38; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 22-JAN-2014, entry version 9. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=SinmeB_5956; OS Sinorhizobium meliloti (strain BL225C). OG Plasmid pSINMEB01. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. OX NCBI_TaxID=698936; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BL225C; RX PubMed=21569405; DOI=10.1186/1471-2164-12-235; RG US DOE Joint Genome Institute; RA Galardini M., Mengoni A., Brilli M., Pini F., Fioravanti A., Lucas S., RA Lapidus A., Cheng J.F., Goodwin L., Pitluck S., Land M., Hauser L., RA Woyke T., Mikhailova N., Ivanova N., Daligault H., Bruce D., RA Detter C., Tapia R., Han C., Teshima H., Mocali S., Bazzicalupo M., RA Biondi E.G.; RT "Exploring the symbiotic pangenome of the nitrogen-fixing bacterium RT Sinorhizobium meliloti."; RL BMC Genomics 12:235-235(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002741; AEG07121.1; -; Genomic_DNA. DR RefSeq; YP_005717881.1; NC_017324.1. DR EnsemblBacteria; AEG07121; AEG07121; SinmeB_5956. DR GeneID; 12307447; -. DR KEGG; smq:SinmeB_5956; -. DR KO; K03198; -. DR BioCyc; SMEL698936:GLK9-907-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 108 AA; 11739 MW; 72E1BEAE4B77864C CRC64; MSDRLEESTL YVAATRPALF LGVPLNLAAL LMMLAGLIIV VVQNPLYEII LVPLWFGSRV VVERDYNAAS VALLYLQTAG RSVDAPFWGG ASVSPNPIKV PRRGRGML // ID F6BZ43_SINMB Unreviewed; 113 AA. AC F6BZ43; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 22-JAN-2014, entry version 9. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=SinmeB_6224; OS Sinorhizobium meliloti (strain BL225C). OG Plasmid pSINMEB01. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. OX NCBI_TaxID=698936; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BL225C; RX PubMed=21569405; DOI=10.1186/1471-2164-12-235; RG US DOE Joint Genome Institute; RA Galardini M., Mengoni A., Brilli M., Pini F., Fioravanti A., Lucas S., RA Lapidus A., Cheng J.F., Goodwin L., Pitluck S., Land M., Hauser L., RA Woyke T., Mikhailova N., Ivanova N., Daligault H., Bruce D., RA Detter C., Tapia R., Han C., Teshima H., Mocali S., Bazzicalupo M., RA Biondi E.G.; RT "Exploring the symbiotic pangenome of the nitrogen-fixing bacterium RT Sinorhizobium meliloti."; RL BMC Genomics 12:235-235(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002741; AEG07349.1; -; Genomic_DNA. DR RefSeq; YP_005718109.1; NC_017324.1. DR EnsemblBacteria; AEG07349; AEG07349; SinmeB_6224. DR GeneID; 12308213; -. DR KEGG; smq:SinmeB_6224; -. DR KO; K03198; -. DR BioCyc; SMEL698936:GLK9-1176-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 113 AA; 12532 MW; 9BB5BDA7739AFF3E CRC64; MADSGPAFEE DTLFIACTRP AMIAGVTMEA MGMNIMLTTI LYIVAGSVAY ALVGVVFHLV FRALVKHDHN MFRILLAWIE TRGRSRNSAY WGGATLSPMK LARKYDERDL GFA // ID F6ECR5_SINMK Unreviewed; 99 AA. AC F6ECR5; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 16-OCT-2013, entry version 10. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Sinme_5715; OS Sinorhizobium meliloti (strain AK83). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. OX NCBI_TaxID=693982; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=AK83; RX PubMed=21569405; DOI=10.1186/1471-2164-12-235; RG US DOE Joint Genome Institute; RA Galardini M., Mengoni A., Brilli M., Pini F., Fioravanti A., Lucas S., RA Lapidus A., Cheng J.F., Goodwin L., Pitluck S., Land M., Hauser L., RA Woyke T., Mikhailova N., Ivanova N., Daligault H., Bruce D., RA Detter C., Tapia R., Han C., Teshima H., Mocali S., Bazzicalupo M., RA Biondi E.G.; RT "Exploring the symbiotic pangenome of the nitrogen-fixing bacterium RT Sinorhizobium meliloti."; RL BMC Genomics 12:235-235(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002783; AEG57265.1; -; Genomic_DNA. DR RefSeq; YP_004551388.1; NC_015591.1. DR EnsemblBacteria; AEG57265; AEG57265; Sinme_5715. DR GeneID; 10728761; -. DR KEGG; smk:Sinme_5715; -. DR KO; K03198; -. DR OMA; VPYMAVV; -. DR BioCyc; SMEL693982:GJDT-5780-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 99 AA; 11082 MW; 4BA325EA25C55BFB CRC64; MSEFQDEKPA LTPLVIGLTR SPTLWGVPYM AVVLIVGFTI IGWLATNDLL ALLIAPVAYL VLFSLCTWDN RILDVMQVTS RKTPRTPNKR FWGTNSYGP // ID F6ED73_SINMK Unreviewed; 113 AA. AC F6ED73; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 16-OCT-2013, entry version 10. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Sinme_5906; OS Sinorhizobium meliloti (strain AK83). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. OX NCBI_TaxID=693982; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=AK83; RX PubMed=21569405; DOI=10.1186/1471-2164-12-235; RG US DOE Joint Genome Institute; RA Galardini M., Mengoni A., Brilli M., Pini F., Fioravanti A., Lucas S., RA Lapidus A., Cheng J.F., Goodwin L., Pitluck S., Land M., Hauser L., RA Woyke T., Mikhailova N., Ivanova N., Daligault H., Bruce D., RA Detter C., Tapia R., Han C., Teshima H., Mocali S., Bazzicalupo M., RA Biondi E.G.; RT "Exploring the symbiotic pangenome of the nitrogen-fixing bacterium RT Sinorhizobium meliloti."; RL BMC Genomics 12:235-235(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002783; AEG57423.1; -; Genomic_DNA. DR RefSeq; YP_004551546.1; NC_015591.1. DR EnsemblBacteria; AEG57423; AEG57423; Sinme_5906. DR GeneID; 10728951; -. DR KEGG; smk:Sinme_5906; -. DR KO; K03198; -. DR OMA; HDHNMFR; -. DR BioCyc; SMEL693982:GJDT-5970-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 113 AA; 12514 MW; 9BB5BDA7739AFE7B CRC64; MADSGPAFEE DTLFIACTRP AMIAGVTMEA MGMNIMLTTI LYIVAGSVAY ALVGVVFHLV FRALVKHDHN MFRILLAWIE TRGRSRNSAY WGGATLSPLK LARKYDERDL GFA // ID F6EYH4_SPHCR Unreviewed; 94 AA. AC F6EYH4; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 22-JAN-2014, entry version 7. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN ORFNames=Sphch_1488; OS Sphingobium chlorophenolicum L-1. OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Sphingobium. OX NCBI_TaxID=690566; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=L-1; RG US DOE Joint Genome Institute; RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., RA Peters L., Daligault H., Han C., Tapia R., Land M., Hauser L., RA Kyrpides N., Ivanova N., Pagani I., Turner P., Copley S., Woyke T.; RT "Complete sequence of chromosome 1 of Sphingobium chlorophenolicum L- RT 1."; RL Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002798; AEG49176.1; -; Genomic_DNA. DR RefSeq; YP_004553682.1; NC_015593.1. DR EnsemblBacteria; AEG49176; AEG49176; Sphch_1488. DR GeneID; 10741803; -. DR KEGG; sch:Sphch_1488; -. DR KO; K03198; -. DR BioCyc; SCHL690566:GJJA-1516-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 94 AA; 10893 MW; C15B456DF96F6E9C CRC64; MSSLKQETVF IALTRPQMFA GVTYSYFVIN MVIAAELFLL FKSLWSIVIA ALLHACGVLL CLREPRFFDL WIARVSLCPR IKNYRLWGCN SYRP // ID F6F0Q6_SPHCR Unreviewed; 99 AA. AC F6F0Q6; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 19-FEB-2014, entry version 10. DE SubName: Full=Putative conjugal transfer TrbD transmembrane protein; GN ORFNames=Sphch_2737; OS Sphingobium chlorophenolicum L-1. OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Sphingobium. OX NCBI_TaxID=690566; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=L-1; RG US DOE Joint Genome Institute; RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., RA Peters L., Daligault H., Han C., Tapia R., Land M., Hauser L., RA Kyrpides N., Ivanova N., Pagani I., Turner P., Copley S., Woyke T.; RT "Complete sequence of chromosome 1 of Sphingobium chlorophenolicum L- RT 1."; RL Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002798; AEG50378.1; -; Genomic_DNA. DR RefSeq; YP_004554884.1; NC_015593.1. DR EnsemblBacteria; AEG50378; AEG50378; Sphch_2737. DR GeneID; 10743005; -. DR KEGG; sch:Sphch_2737; -. DR KO; K03198; -. DR BioCyc; SCHL690566:GJJA-2789-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 99 AA; 10386 MW; 637AF3530AAEC311 CRC64; MVEIRSLGAG PFGGGQAEGF EVPLHRSLTE PILLGGAPRG IAILNGTLAA AMGLGLQQWI AGLLLWLAGH SLAVFAAKRD PDFAPILARH LRQKVHLSC // ID F6F481_SPHCR Unreviewed; 116 AA. AC F6F481; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 22-JAN-2014, entry version 8. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN ORFNames=Sphch_4162; OS Sphingobium chlorophenolicum L-1. OG Plasmid pSPHCH01. OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Sphingobium. OX NCBI_TaxID=690566; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=L-1; PLASMID=pSPHCH01; RG US DOE Joint Genome Institute; RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., RA Peters L., Daligault H., Han C., Tapia R., Land M., Hauser L., RA Kyrpides N., Ivanova N., Pagani I., Turner P., Copley S., Woyke T.; RT "Complete sequence of plasmid of Sphingobium chlorophenolicum L-1."; RL Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002800; AEG51740.1; -; Genomic_DNA. DR RefSeq; YP_004556246.1; NC_015595.1. DR EnsemblBacteria; AEG51740; AEG51740; Sphch_4162. DR GeneID; 10724521; -. DR KEGG; sch:Sphch_4162; -. DR KO; K03198; -. DR BioCyc; SCHL690566:GJJA-4229-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 116 AA; 12636 MW; B3A9E7474F94B66E CRC64; MKESAALDER LREETLFLAV TRPTMWLGVP LEASLPIALA ACLTLIVSGN PLYAGAIGGA CLAVARLIVR HDANAFRLLW LWTMTKARSR NRAWWGGSSY SPLPVAGLKR KGFARG // ID F6IBW8_9SPHN Unreviewed; 112 AA. AC F6IBW8; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 22-JAN-2014, entry version 9. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=PP1Y_Spl385; OS Novosphingobium sp. PP1Y. OG Plasmid. OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Novosphingobium. OX NCBI_TaxID=702113; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=PP1Y; RX PubMed=21685292; DOI=10.1128/JB.05349-11; RA D'Argenio V., Petrillo M., Cantiello P., Naso B., Cozzuto L., RA Notomista E., Paolella G., Di Donato A., Salvatore F.; RT "De novo sequencing and assembly of the whole genome of RT Novosphingobium sp. strain PP1Y."; RL J. Bacteriol. 193:4296-4296(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FR856859; CCA89793.1; -; Genomic_DNA. DR RefSeq; YP_004537959.1; NC_015582.1. DR EnsemblBacteria; CCA89793; CCA89793; PP1Y_Spl385. DR GeneID; 10717794; -. DR KEGG; npp:PP1Y_Spl385; -. DR KO; K03198; -. DR BioCyc; NSP702113:GJD2-4742-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 112 AA; 12859 MW; 27D89545B5CA7370 CRC64; MDTEKIAEDK VFLALTRPSV FMGLPLEAIL PIIMVCMVVW GIVGNPFYPL ALFGALYFPA RMVVHYDFNA FRLWGLWFQT TFVSKNRMFW GGGSYSPVRL KTGVKRRQFG ND // ID F6IC29_9SPHN Unreviewed; 90 AA. AC F6IC29; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 22-JAN-2014, entry version 9. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=PP1Y_Lpl510; OS Novosphingobium sp. PP1Y. OG Plasmid Lpl. OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Novosphingobium. OX NCBI_TaxID=702113; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=PP1Y; PLASMID=Lpl; RX PubMed=21685292; DOI=10.1128/JB.05349-11; RA D'Argenio V., Petrillo M., Cantiello P., Naso B., Cozzuto L., RA Notomista E., Paolella G., Di Donato A., Salvatore F.; RT "De novo sequencing and assembly of the whole genome of RT Novosphingobium sp. strain PP1Y."; RL J. Bacteriol. 193:4296-4296(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FR856860; CCA89854.1; -; Genomic_DNA. DR RefSeq; YP_004532642.1; NC_015579.1. DR EnsemblBacteria; CCA89854; CCA89854; PP1Y_Lpl510. DR GeneID; 10714174; -. DR KEGG; npp:PP1Y_Lpl510; -. DR KO; K03198; -. DR BioCyc; NSP702113:GJD2-4550-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 90 AA; 9751 MW; ADC44481BC123930 CRC64; MAEPAEPIPG YFAPVHRALT EPILLGGAPR SLAIVNGTLA GAIGLGLRLW IAGLALWVIG HALSVWAARH DPQFAEVARR HLRYPAWMRP // ID F6IJ29_9SPHN Unreviewed; 93 AA. AC F6IJ29; DT 27-JUL-2011, integrated into UniProtKB/TrEMBL. DT 27-JUL-2011, sequence version 1. DT 22-JAN-2014, entry version 8. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=PP1Y_AT7133; OS Novosphingobium sp. PP1Y. OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Novosphingobium. OX NCBI_TaxID=702113; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=PP1Y; RA D'Argenio V., Petrillo M., Cantiello P., Naso B., Cozzuto L., RA Notomista E., Paolella G., Di Donato A., Salvatore F.; RT "De Novo Sequencing and Assembly of the Whole Genome of RT Novosphingobium sp. Strain PP1Y."; RL J. Bacteriol. 193:4296-4296(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FR856862; CCA91655.1; -; Genomic_DNA. DR RefSeq; YP_004533473.1; NC_015580.1. DR EnsemblBacteria; CCA91655; CCA91655; PP1Y_AT7133. DR GeneID; 10717451; -. DR KEGG; npp:PP1Y_AT7133; -. DR KO; K03198; -. DR BioCyc; NSP702113:GJD2-686-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 10548 MW; 2E701CF69DF340F6 CRC64; MSLARYPVHR ALTRPQMFAG VTYSFFIINA AVTTEIFLIT KSFWALPAAL AIHGVGYLAC LREPRVFDLW IAKVSKCPRV ANWQRWGCNS YAP // ID F7L1D0_FUSNU Unreviewed; 88 AA. AC F7L1D0; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 18-SEP-2013, entry version 4. DE SubName: Full=Uncharacterized protein; GN ORFNames=HMPREF0401_01651; OS Fusobacterium nucleatum subsp. animalis 11_3_2. OC Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; OC Fusobacterium. OX NCBI_TaxID=457403; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=11_3_2; RG The Broad Institute Genome Sequencing Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Sibley C.D., White A.P., RA Crowley S., Surette M., Strauss J.C., Ambrose C.E., Allen-Vercoe E., RA Young S.K., Zeng Q., Gargeya S., Fitzgerald M., Haas B., RA Abouelleil A., Alvarado L., Arachchi H.M., Berlin A., Brown A., RA Chapman S.B., Chen Z., Dunbar C., Freedman E., Gearin G., Gellesch M., RA Goldberg J., Griggs A., Gujja S., Heiman D., Howarth C., Larson L., RA Lui A., MacDonald P.J.P., Mehta T., Montmayeur A., Murphy C., RA Neiman D., Pearson M., Priest M., Roberts A., Saif S., Shea T., RA Shenoy N., Sisk P., Stolte C., Sykes S., Wortman J., Nusbaum C., RA Birren B.; RT "The Genome Sequence of Fusobacterium sp. 11_3_2."; RL Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACUO01000022; EGN66682.1; -; Genomic_DNA. DR EnsemblBacteria; EGN66682; EGN66682; HMPREF0401_01651. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 88 AA; 10297 MW; 430E7EB70002BEBD CRC64; MEEELDGFQV PVCQGLVKPI TILGISREAM ILNVATAAIF VLSLRLYYLF WVFFITHYLL FRACKKDPEV INIFLKKYIR QLDYYGEG // ID F7ND83_XYLFS Unreviewed; 106 AA. AC F7ND83; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 03-APR-2013, entry version 5. DE SubName: Full=Type IV secretory pathway, TrbD component; GN ORFNames=XFEB_02385; OS Xylella fastidiosa EB92.1. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xylella. OX NCBI_TaxID=945689; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=EB92.1; RX PubMed=21914886; DOI=10.1128/JB.05430-11; RA Zhang S., Flores-Cruz Z., Kumar D., Chakrabarty P., Hopkins D.L., RA Gabriel D.W.; RT "The Xylella fastidiosa Biocontrol Strain EB92-1 Genome Is Very RT Similar and Syntenic to Pierce's Disease Strains."; RL J. Bacteriol. 193:5576-5577(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFDJ01000168; EGO80814.1; -; Genomic_DNA. DR EnsemblBacteria; EGO80814; EGO80814; XFEB_02385. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 106 AA; 12471 MW; F880A39CAD41591A CRC64; MALRTIPIRR AGNRDNLFMG GDREMVMFSG LLCAILIFLA QDWIAAGFGL GMWFIALWLF RKMAKADPRM RFVYMRNRRY KAYYPPRATP FRNNTASQGN QYKCFK // ID F7QEX8_9BRAD Unreviewed; 66 AA. AC F7QEX8; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 22-JAN-2014, entry version 5. DE SubName: Full=Conjugative transfer protein TrbD; GN Name=trbD; ORFNames=CSIRO_0095; OS Bradyrhizobiaceae bacterium SG-6C. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae. OX NCBI_TaxID=709797; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=SG-6C; RX PubMed=21742875; DOI=10.1128/JB.05647-11; RA Pearce S.L., Pandey R., Dorrian S.J., Russell R.J., Oakeshott J.G., RA Pandey G.; RT "Genome Sequence of the Newly Isolated Chemolithoautotrophic RT Bradyrhizobiaceae Strain SG-6C."; RL J. Bacteriol. 193:5057-5057(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFOF01000001; EGP10318.1; -; Genomic_DNA. DR EnsemblBacteria; EGP10318; EGP10318; CSIRO_0095. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 66 AA; 7095 MW; CD6BF0820F347B17 CRC64; MGGAPRSVAI LNGTLAAALG LGLRLWIAGL VLWFIGHMAA VWAAKRDPAF VDVVRRHLRI PSHLNV // ID F7SAM5_9PROT Unreviewed; 90 AA. AC F7SAM5; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Conjugal transfer protein; GN ORFNames=APM_3448; OS Acidiphilium sp. PM. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Acetobacteraceae; Acidiphilium. OX NCBI_TaxID=1043206; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=PM; RX PubMed=21914891; DOI=10.1128/JB.05386-11; RA San Martin-Uriz P., Gomez M.J., Arcas A., Bargiela R., Amils R.; RT "Draft Genome Sequence of the Electricigen Acidiphilium sp. Strain PM RT (DSM 24941)."; RL J. Bacteriol. 193:5585-5586(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFPR01000513; EGO93845.1; -; Genomic_DNA. DR EnsemblBacteria; EGO93845; EGO93845; APM_3448. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 90 AA; 9637 MW; 08775E19660CF45A CRC64; MSNLADIPGW SVPLHRSLTE PILLAGIPRG MAIALGTLAA AIGLGLQLWL AGIAIYLIGH TAALFLTRQD PQFGPVFARH LRAARHHLDI // ID F7SC32_9PROT Unreviewed; 107 AA. AC F7SC32; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 13-NOV-2013, entry version 5. DE SubName: Full=Type IV secretory pathway, VirB3 family protein; DE Flags: Fragment; GN ORFNames=APM_0247; OS Acidiphilium sp. PM. OG Plasmid pAPM03. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Acetobacteraceae; Acidiphilium. OX NCBI_TaxID=1043206; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=PM; PLASMID=pAPM03; RX PubMed=21914891; DOI=10.1128/JB.05386-11; RA San Martin-Uriz P., Gomez M.J., Arcas A., Bargiela R., Amils R.; RT "Draft Genome Sequence of the Electricigen Acidiphilium sp. Strain PM RT (DSM 24941)."; RL J. Bacteriol. 193:5585-5586(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFPR01000590; EGO93293.1; -; Genomic_DNA. DR EnsemblBacteria; EGO93293; EGO93293; APM_0247. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. FT NON_TER 1 1 SQ SEQUENCE 107 AA; 11973 MW; E93ED41333FE2D02 CRC64; RQRDPLFVAA TRPALFLGLP IEMAVVIIMI GAMIVIFGHN PFYLTLVLPL WFGARWLVRY DYNAPRVAWL WFRTKATGAG ENQAWGGASP APFPMKVQQG RGMRNAG // ID F7SC93_9PROT Unreviewed; 107 AA. AC F7SC93; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 13-NOV-2013, entry version 5. DE SubName: Full=Type IV secretory pathway, VirB3 family protein; DE Flags: Fragment; GN ORFNames=APM_3729; OS Acidiphilium sp. PM. OG Plasmid pAPM03. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Acetobacteraceae; Acidiphilium. OX NCBI_TaxID=1043206; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=PM; PLASMID=pAPM03; RX PubMed=21914891; DOI=10.1128/JB.05386-11; RA San Martin-Uriz P., Gomez M.J., Arcas A., Bargiela R., Amils R.; RT "Draft Genome Sequence of the Electricigen Acidiphilium sp. Strain PM RT (DSM 24941)."; RL J. Bacteriol. 193:5585-5586(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFPR01000608; EGO93232.1; -; Genomic_DNA. DR EnsemblBacteria; EGO93232; EGO93232; APM_3729. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. FT NON_TER 1 1 SQ SEQUENCE 107 AA; 11945 MW; E9267BF47B51CA52 CRC64; RQRDPLFVAA TRPALFLGLP IEMAVAIIMI GAMIVIFGHN PFYLTLVLPL WFGARWLVRY DYNAPRVAWL WFRTKATGAG ENQAWGGASP APFPMKVQQG RGMRNAG // ID F7UE95_RHIRD Unreviewed; 93 AA. AC F7UE95; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 03-APR-2013, entry version 5. DE SubName: Full=Conjugal transfer protein; GN ORFNames=Agau_L101181; OS Agrobacterium tumefaciens F2. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=1050720; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=F2; RX PubMed=21914861; DOI=10.1128/JB.05690-11; RA Li A., Geng J., Cui D., Shu C., Zhang S., Yang J., Xing J., Wang J., RA Ma F., Hu S.; RT "Genome Sequence of Agrobacterium tumefaciens Strain F2, a RT Bioflocculant-Producing Bacterium."; RL J. Bacteriol. 193:5531-5531(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFSD01000003; EGP55773.1; -; Genomic_DNA. DR EnsemblBacteria; EGP55773; EGP55773; Agau_L101181. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 93 AA; 10044 MW; F8ADDF3CDF99BE27 CRC64; MAGFPLEFED VRGFFAPVHR ALTEQILLGG APRGVAIVNG TLAGAVGLGL RLWIAGLVIW AIGHFVAVWA AKRDAQFVDV GRRHLRYPAH MAV // ID F7UFH2_RHIRD Unreviewed; 93 AA. AC F7UFH2; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 03-APR-2013, entry version 5. DE SubName: Full=Conjugal transfer protein TrbB; GN Name=virB3; ORFNames=Agau_L300035; OS Agrobacterium tumefaciens F2. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=1050720; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=F2; RX PubMed=21914861; DOI=10.1128/JB.05690-11; RA Li A., Geng J., Cui D., Shu C., Zhang S., Yang J., Xing J., Wang J., RA Ma F., Hu S.; RT "Genome Sequence of Agrobacterium tumefaciens Strain F2, a RT Bioflocculant-Producing Bacterium."; RL J. Bacteriol. 193:5531-5531(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFSD01000005; EGP54477.1; -; Genomic_DNA. DR EnsemblBacteria; EGP54477; EGP54477; Agau_L300035. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 93 AA; 9922 MW; ED65150DBCE492F8 CRC64; MAAGFEQLDA VPGFSVPVHR ALTEHILLGG APRSIAIMNG TLAGAVGLGL RLWLVGLAIW MIGHLTAVWA AKRDPLFVEV GRRHLRIPGH LSV // ID F7UH92_RHIRD Unreviewed; 99 AA. AC F7UH92; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 13-NOV-2013, entry version 6. DE SubName: Full=Conjugal transfer protein; GN ORFNames=Agau_P200085; OS Agrobacterium tumefaciens F2. OG Plasmid unnamed p2. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=1050720; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=F2; PLASMID=unnamed p2; RX PubMed=21914861; DOI=10.1128/JB.05690-11; RA Li A., Geng J., Cui D., Shu C., Zhang S., Yang J., Xing J., Wang J., RA Ma F., Hu S.; RT "Genome Sequence of Agrobacterium tumefaciens Strain F2, a RT Bioflocculant-Producing Bacterium."; RL J. Bacteriol. 193:5531-5531(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFSD01000008; EGP53961.1; -; Genomic_DNA. DR EnsemblBacteria; EGP53961; EGP53961; Agau_P200085. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 99 AA; 11190 MW; 2B7CC83CF1D18128 CRC64; MAEAGSSLAR SRVHRALSRP NLLVGADREL VLLTALAAVI LIFVVLTWYA ALFGIAIWLV AVAALRMMAK ADPLMRRVYI RHISYKTFYR ATSSPWRRF // ID F7UHV8_RHIRD Unreviewed; 76 AA. AC F7UHV8; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 13-NOV-2013, entry version 6. DE SubName: Full=Putative conjugal transfer protein TrbD; GN ORFNames=Agau_P200458; OS Agrobacterium tumefaciens F2. OG Plasmid unnamed p2. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=1050720; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=F2; PLASMID=unnamed p2; RX PubMed=21914861; DOI=10.1128/JB.05690-11; RA Li A., Geng J., Cui D., Shu C., Zhang S., Yang J., Xing J., Wang J., RA Ma F., Hu S.; RT "Genome Sequence of Agrobacterium tumefaciens Strain F2, a RT Bioflocculant-Producing Bacterium."; RL J. Bacteriol. 193:5531-5531(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFSD01000008; EGP54177.1; -; Genomic_DNA. DR EnsemblBacteria; EGP54177; EGP54177; Agau_P200458. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 76 AA; 8793 MW; 5FAF1AAF03FB3695 CRC64; MGADRELVLL TGLAAVILIF VVLTVYSALF GILIWIVIVG VLRMMAKADP MMRQVYVRHM RYRPHYLPTS SPWRQF // ID F7XC31_SINMM Unreviewed; 99 AA. AC F7XC31; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 13-NOV-2013, entry version 9. DE SubName: Full=Conjugal transfer protein; GN Name=virB3-2; OrderedLocusNames=SM11_pC0249; OS Sinorhizobium meliloti (strain SM11). OG Plasmid pSmeSM11c. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. OX NCBI_TaxID=707241; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=SM11; PLASMID=pSmeSM11c; RX PubMed=21396969; DOI=10.1016/j.jbiotec.2010.12.018; RA Schneiker-Bekel S., Wibberg D., Bekel T., Blom J., Linke B., RA Neuweger H., Stiens M., Vorholter F.J., Weidner S., Goesmann A., RA Puhler A., Schluter A.; RT "The complete genome sequence of the dominant Sinorhizobium meliloti RT field isolate SM11 extends the S. meliloti pan-genome."; RL J. Biotechnol. 155:20-33(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001831; AEH81322.1; -; Genomic_DNA. DR RefSeq; YP_005724131.1; NC_017327.1. DR EnsemblBacteria; AEH81322; AEH81322; SM11_pC0249. DR GeneID; 12315727; -. DR KEGG; smx:SM11_pC0249; -. DR KO; K03198; -. DR BioCyc; SMEL707241:GLKB-4095-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 99 AA; 11034 MW; 50B825EA25D54BFB CRC64; MSEFQDEKPA LTPLVIGLTR SPTLWGVPYM AVVLIVGVTI IGWLATNDLL ALLIAPVAYL VLFSLCTWDN RILDVMQVTS RKTPRTPNKR FWGTNSYGP // ID F7XEP0_SINMM Unreviewed; 113 AA. AC F7XEP0; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 13-NOV-2013, entry version 9. DE SubName: Full=VirB3 type IV secretion protein; GN Name=virB3-1; OrderedLocusNames=SM11_pC0942; OS Sinorhizobium meliloti (strain SM11). OG Plasmid pSmeSM11c. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. OX NCBI_TaxID=707241; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=SM11; PLASMID=pSmeSM11c; RX PubMed=21396969; DOI=10.1016/j.jbiotec.2010.12.018; RA Schneiker-Bekel S., Wibberg D., Bekel T., Blom J., Linke B., RA Neuweger H., Stiens M., Vorholter F.J., Weidner S., Goesmann A., RA Puhler A., Schluter A.; RT "The complete genome sequence of the dominant Sinorhizobium meliloti RT field isolate SM11 extends the S. meliloti pan-genome."; RL J. Biotechnol. 155:20-33(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP001831; AEH82015.1; -; Genomic_DNA. DR RefSeq; YP_005724824.1; NC_017327.1. DR EnsemblBacteria; AEH82015; AEH82015; SM11_pC0942. DR GeneID; 12314659; -. DR KEGG; smx:SM11_pC0942; -. DR KO; K03198; -. DR BioCyc; SMEL707241:GLKB-4788-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 113 AA; 12494 MW; 57D6F08C8B38745B CRC64; MADSGPALEE DTLFIACTRP AMIAGVTMEA MGMNIMLTTI LYIVAGSVAY ALVGVVFHLV FRALIKHDHN MFRILLAWIE TRGRSRNSAY WGGATLSPLK LARKYDERDL GFA // ID F7XZ35_RHIFR Unreviewed; 99 AA. AC F7XZ35; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 13-NOV-2013, entry version 4. DE SubName: Full=Conjugal transfer trbD protein; GN Name=trbD; ORFNames=SFGR64A_00160; OS Sinorhizobium fredii GR64. OG Plasmid p64a. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. OX NCBI_TaxID=882101; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=GR64; PLASMID=p64a; RX PubMed=21702991; DOI=10.1186/1471-2180-11-149; RA Cervantes L., Bustos P., Girard L., Santamaria R.I., Davila G., RA Vinuesa P., Romero D., Brom S.; RT "The conjugative plasmid of a bean-nodulating Sinorhizobium fredii RT strain is assembled from sequences of two Rhizobium plasmids and the RT chromosome of a Sinorhizobium strain."; RL BMC Microbiol. 11:149-149(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002245; AEI89696.1; -; Genomic_DNA. DR RefSeq; YP_004716833.1; NC_015742.1. DR GeneID; 10953071; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 99 AA; 11332 MW; 4A981AB3DE1BFDB2 CRC64; MAESLSGLQR NRIHRALSRP NLLMGADREL VLLTGLAAVI LIFVVLTAYS ALFGIAIWIV LVGVLRMMAK ADPLMRQVYV RHISYRHYYK ATSSPWRRY // ID F7Y1E7_MESOW Unreviewed; 90 AA. AC F7Y1E7; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 19-FEB-2014, entry version 9. DE SubName: Full=Putative conjugal transfer TrbD transmembrane protein; GN OrderedLocusNames=Mesop_6101; OS Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Phyllobacteriaceae; Mesorhizobium. OX NCBI_TaxID=536019; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=LMG 24607 / HAMBI 3007 / WSM2075; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., RA Pitluck S., Chertkov O., Misra M., Detter J.C., Han C., Tapia R., RA Land M., Hauser L., Kyrpides N., Ovchinnikova G., Mavrommatis K.M., RA Tiwari R.P., Howieson J.G., O'Hara G.W., Nandasena K.G., Woyke T.; RT "Complete sequence of Mesorhizobium opportunistum WSM2075."; RL Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002279; AEH90503.1; -; Genomic_DNA. DR RefSeq; YP_004614597.1; NC_015675.1. DR EnsemblBacteria; AEH90503; AEH90503; Mesop_6101. DR GeneID; 10829966; -. DR KEGG; mop:Mesop_6101; -. DR KO; K03198; -. DR BioCyc; MOPP536019:GH56-6163-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 90 AA; 9704 MW; 3D661814AECBCEAF CRC64; MFAREHHIEG FEVPVHRALT EPILLGGAPR AVAILSGTVA AAVGLGLQQW IAGLVLWTCA HTVAVFAARR DPDFASVLVR HLRLKGWLAC // ID F7Y2N9_MESOW Unreviewed; 108 AA. AC F7Y2N9; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 29-MAY-2013, entry version 8. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN OrderedLocusNames=Mesop_6180; OS Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Phyllobacteriaceae; Mesorhizobium. OX NCBI_TaxID=536019; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=LMG 24607 / HAMBI 3007 / WSM2075; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., RA Pitluck S., Chertkov O., Misra M., Detter J.C., Han C., Tapia R., RA Land M., Hauser L., Kyrpides N., Ovchinnikova G., Mavrommatis K.M., RA Tiwari R.P., Howieson J.G., O'Hara G.W., Nandasena K.G., Woyke T.; RT "Complete sequence of Mesorhizobium opportunistum WSM2075."; RL Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002279; AEH90578.1; -; Genomic_DNA. DR RefSeq; YP_004614672.1; NC_015675.1. DR EnsemblBacteria; AEH90578; AEH90578; Mesop_6180. DR GeneID; 10830045; -. DR KEGG; mop:Mesop_6180; -. DR KO; K03198; -. DR BioCyc; MOPP536019:GH56-6242-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 108 AA; 11574 MW; 4A308AF1412524E3 CRC64; MSDRLEVSTL YVAATRPALF LGVPLTLAGA LMMLAGLVII ILKNPLYEVV LVPLWFGARL IVERDYNAAS VAFLYLQTAG RSVDGSVWGG ASVSANPIRV PKRGRGMV // ID F7Y4H6_MESOW Unreviewed; 93 AA. AC F7Y4H6; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 16-OCT-2013, entry version 8. DE SubName: Full=Conjugal transfer protein TrbB; GN OrderedLocusNames=Mesop_2838; OS Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Phyllobacteriaceae; Mesorhizobium. OX NCBI_TaxID=536019; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=LMG 24607 / HAMBI 3007 / WSM2075; RG US DOE Joint Genome Institute; RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., RA Pitluck S., Chertkov O., Misra M., Detter J.C., Han C., Tapia R., RA Land M., Hauser L., Kyrpides N., Ovchinnikova G., Mavrommatis K.M., RA Tiwari R.P., Howieson J.G., O'Hara G.W., Nandasena K.G., Woyke T.; RT "Complete sequence of Mesorhizobium opportunistum WSM2075."; RL Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002279; AEH87296.1; -; Genomic_DNA. DR RefSeq; YP_004611390.1; NC_015675.1. DR EnsemblBacteria; AEH87296; AEH87296; Mesop_2838. DR GeneID; 10826675; -. DR KEGG; mop:Mesop_2838; -. DR KO; K03198; -. DR BioCyc; MOPP536019:GH56-2871-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 10018 MW; 004C4F951D88020F CRC64; MTTVLEQLDA VPGWSAPVHR ALTEQILLGG APRAIAILNG TLAGAVGLGL RLWLVGLLIW AIGHATAVWS VRRDPLFFEV GRRHLRLPGH LSV // ID F7ZMA7_ROSLO Unreviewed; 92 AA. AC F7ZMA7; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 13-NOV-2013, entry version 8. DE SubName: Full=VirB3-like protein; GN OrderedLocusNames=RLO149_p830130; OS Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC OS 15278 / OCh 149). OG Plasmid pRLO149_83. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Roseobacter. OX NCBI_TaxID=391595; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149; RC PLASMID=pRLO149_83; RX PubMed=21693016; DOI=10.1186/1471-2164-12-324; RA Kalhoefer D., Thole S., Voget S., Lehmann R., Liesegang H., RA Wollher A., Daniel R., Simon M., Brinkhoff T.; RT "Comparative genome analysis and genome-guided physiological analysis RT of Roseobacter litoralis."; RL BMC Genomics 12:324-324(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002625; AEI96444.1; -; Genomic_DNA. DR RefSeq; YP_004688870.1; NC_015728.1. DR EnsemblBacteria; AEI96444; AEI96444; RLO149_p830130. DR GeneID; 10948303; -. DR KEGG; rli:RLO149_p830130; -. DR KO; K03198; -. DR BioCyc; RLIT391595:GJEH-4527-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 92 AA; 10182 MW; 4E483B64779D8191 CRC64; MAMRSPLFLG LARPPKYLGL PVGYLVVLTL GVVLPFIWTK SPVFFLVGAL AYPVLWFVAD KEPHFFEVLR VSYGTVRGTR NRALHGGDSY GA // ID F8BJH8_OLICM Unreviewed; 93 AA. AC F8BJH8; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 14-MAY-2014, entry version 13. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=OCA4_c05360; OS Oligotropha carboxidovorans (strain OM4). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Oligotropha. OX NCBI_TaxID=1031710; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=OM4; RX PubMed=21742883; DOI=10.1128/JB.05619-11; RA Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., RA Meyer O.; RT "Complete genome sequences of the chemolithoautotrophic Oligotropha RT carboxidovorans strains OM4 and OM5."; RL J. Bacteriol. 193:5043-5043(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002821; AEI01686.1; -; Genomic_DNA. DR RefSeq; YP_005949567.1; NC_017538.1. DR EnsemblBacteria; AEI01686; AEI01686; OCA4_c05360. DR GeneID; 12540366; -. DR KEGG; oco:OCA4_c05360; -. DR KO; K03198; -. DR OMA; WAIGHIA; -. DR BioCyc; OCAR1031710:GLI1-536-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9964 MW; D021A3BB705B3030 CRC64; MATAFEQLDA VPGYSIPVHR ALTEHILLGG APRSIAILNG TLAGAVGLGL RLWLVGLLIW AIGHFAAVWA AKRDPLFVEV GRRHLRIPGH LSV // ID F8BKQ1_OLICM Unreviewed; 87 AA. AC F8BKQ1; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 14-MAY-2014, entry version 13. DE SubName: Full=Putative conjugal transfer protein TrbD; GN Name=trbD; OrderedLocusNames=OCA4_c16200; OS Oligotropha carboxidovorans (strain OM4). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Oligotropha. OX NCBI_TaxID=1031710; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=OM4; RX PubMed=21742883; DOI=10.1128/JB.05619-11; RA Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., RA Meyer O.; RT "Complete genome sequences of the chemolithoautotrophic Oligotropha RT carboxidovorans strains OM4 and OM5."; RL J. Bacteriol. 193:5043-5043(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002821; AEI02758.1; -; Genomic_DNA. DR RefSeq; YP_005950639.1; NC_017538.1. DR EnsemblBacteria; AEI02758; AEI02758; OCA4_c16200. DR GeneID; 12541450; -. DR KEGG; oco:OCA4_c16200; -. DR KO; K03198; -. DR OMA; PGLVLWI; -. DR BioCyc; OCAR1031710:GLI1-1620-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 87 AA; 9426 MW; 519E7FB3131E049B CRC64; MEEDVRGFFA PVHRALTEPI LLGGAPRTVA IANGTLAGAV GLGLRLWIAG LVIWAIGHFA AIWAAKRDAQ FVDVGRRHLR YPAHMDV // ID F8BQV2_OLICM Unreviewed; 99 AA. AC F8BQV2; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 11-DEC-2013, entry version 11. DE SubName: Full=Conjugal transfer protein TrbD; GN Name=trbD; OrderedLocusNames=OCA4_pHCG3B01240; OS Oligotropha carboxidovorans (strain OM4). OG Plasmid pHCG3B. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Oligotropha. OX NCBI_TaxID=1031710; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=OM4; PLASMID=pHCG3B; RX PubMed=21742883; DOI=10.1128/JB.05619-11; RA Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., RA Meyer O.; RT "Complete genome sequences of the chemolithoautotrophic Oligotropha RT carboxidovorans strains OM4 and OM5."; RL J. Bacteriol. 193:5043-5043(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002822; AEI04567.1; -; Genomic_DNA. DR RefSeq; YP_005946061.1; NC_017536.1. DR EnsemblBacteria; AEI04567; AEI04567; OCA4_pHCG3B01240. DR GeneID; 12536696; -. DR KEGG; oco:OCA4_pHCG3B01240; -. DR KO; K03198; -. DR OMA; LRMMAKS; -. DR BioCyc; OCAR1031710:GLI1-3638-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 99 AA; 11357 MW; 4277CA037D485D4F CRC64; MAEGLSGLHR SRIHRALSRP NLLLGADREL VLVTGLAAVI LIFVVLTWFS ALLGLAIWSG IVGLLRMMAK ADPMMRQVYL RHIRYRPRYR PTSTPWRKY // ID F8BR72_OLICM Unreviewed; 98 AA. AC F8BR72; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 11-DEC-2013, entry version 11. DE SubName: Full=Type IV secretion protein VirB3; GN Name=virB3; OrderedLocusNames=OCA4_pOC167B01200; OS Oligotropha carboxidovorans (strain OM4). OG Plasmid pOC167B. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Oligotropha. OX NCBI_TaxID=1031710; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=OM4; PLASMID=pOC167B; RX PubMed=21742883; DOI=10.1128/JB.05619-11; RA Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., RA Meyer O.; RT "Complete genome sequences of the chemolithoautotrophic Oligotropha RT carboxidovorans strains OM4 and OM5."; RL J. Bacteriol. 193:5043-5043(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002823; AEI04687.1; -; Genomic_DNA. DR RefSeq; YP_005952445.1; NC_017539.1. DR EnsemblBacteria; AEI04687; AEI04687; OCA4_pOC167B01200. DR GeneID; 12543297; -. DR KEGG; oco:OCA4_pOC167B01200; -. DR KO; K03198; -. DR OMA; VPYMAVV; -. DR BioCyc; OCAR1031710:GLI1-3468-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 98 AA; 11165 MW; 344E1E529BC013F1 CRC64; MTENELEDPL ITPLVKALTR APTLMGVPYM YFMFNGVVSS VCFLISHNLF MLLVAIPLHL FGFVMTLRDD RIFEILFVKS TKCPPRSRAF WAADSYSA // ID F8GX43_CUPNN Unreviewed; 90 AA. AC F8GX43; DT 21-SEP-2011, integrated into UniProtKB/TrEMBL. DT 21-SEP-2011, sequence version 1. DT 16-APR-2014, entry version 13. DE SubName: Full=Conjugal transfer transmembrane protein TrbD; GN Name=trbD; OrderedLocusNames=CNE_BB1p04890; OS Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia OS eutropha). OG Plasmid pBB1. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Cupriavidus. OX NCBI_TaxID=1042878; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 43291 / DSM 13513 / N-1; PLASMID=pBB1; RX PubMed=21742890; DOI=10.1128/JB.05660-11; RA Poehlein A., Kusian B., Friedrich B., Daniel R., Bowien B.; RT "Complete Genome Sequence of the Type Strain Cupriavidus necator N- RT 1."; RL J. Bacteriol. 193:5017-5017(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002879; AEI81913.1; -; Genomic_DNA. DR RefSeq; YP_004687951.1; NC_015727.1. DR EnsemblBacteria; AEI81913; AEI81913; CNE_BB1p04890. DR GeneID; 10915469; -. DR KEGG; cnc:CNE_BB1p04890; -. DR KO; K03198; -. DR BioCyc; CNEC1042878:GH0Z-6651-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Plasmid; Transmembrane. SQ SEQUENCE 90 AA; 9550 MW; C9F6199CEEEAB137 CRC64; MSGVDSFAAG FEVPLHRSLT EPILMGGAPR TVAIANGTLA AAVGLGLQLW IPGVALWIVG HSLAVWGARV DPQFMQVFAR HIKHKPLLDV // ID F8XL29_9GAMM Unreviewed; 38 AA. AC F8XL29; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 19-MAR-2014, entry version 4. DE SubName: Full=Uncharacterized protein; DE Flags: Fragment; GN ORFNames=GGI1_00325; OS Acidithiobacillus sp. GGI-221. OC Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; OC Acidithiobacillaceae; Acidithiobacillus. OX NCBI_TaxID=872330; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=GGI-221; RA Bagatharia S.B., Saxena A.K., Dave S.R., Vyas J.M., Dahiya M.S., RA Joshi C.G., Joshi M.N., Pandit A.S., Saiyed Z.M., Patel M.J., RA Sajnani M.R., Ahir V.B., Koringa P.G., Jakhesara S.J., Tipre D.R., RA Saxena R.S.; RL Submitted (JUL-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEFB01000021; EGQ60422.1; -; Genomic_DNA. DR EnsemblBacteria; EGQ60422; EGQ60422; GGI1_00325. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; FT NON_TER 38 38 SQ SEQUENCE 38 AA; 4362 MW; BEF6791B3071B202 CRC64; MDGTRQVRLY QSLVRPHLLM GAERTATMYN AGFAMLVY // ID F8XU75_9GAMM Unreviewed; 115 AA. AC F8XU75; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Conjugal transfer TrbD family protein; DE Flags: Fragment; GN ORFNames=GGI1_18184; OS Acidithiobacillus sp. GGI-221. OC Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; OC Acidithiobacillaceae; Acidithiobacillus. OX NCBI_TaxID=872330; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=GGI-221; RA Bagatharia S.B., Saxena A.K., Dave S.R., Vyas J.M., Dahiya M.S., RA Joshi C.G., Joshi M.N., Pandit A.S., Saiyed Z.M., Patel M.J., RA Sajnani M.R., Ahir V.B., Koringa P.G., Jakhesara S.J., Tipre D.R., RA Saxena R.S.; RL Submitted (JUL-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEFB01001068; EGQ63268.1; -; Genomic_DNA. DR EnsemblBacteria; EGQ63268; EGQ63268; GGI1_18184. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; FT NON_TER 1 1 SQ SEQUENCE 115 AA; 13098 MW; 7C4E0969A222E926 CRC64; RVLISDRSIY WETDMDTTTK QEITIHQSLH QPILVMGGER NLVMMLGVIA GVFIFSLAQL WAAVIGVLLW VFGQWGLAQL AKYDPMLSKT GKRHMKYKKY YPASATPFAP NRVIK // ID F9EPM1_FUSNU Unreviewed; 87 AA. AC F9EPM1; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 13-NOV-2013, entry version 4. DE SubName: Full=Uncharacterized protein; GN ORFNames=HMPREF9094_1876; OS Fusobacterium nucleatum subsp. animalis ATCC 51191. OC Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; OC Fusobacterium. OX NCBI_TaxID=997347; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 51191; RA Muzny D., Qin X., Deng J., Jiang H., Liu Y., Qu J., Song X.-Z., RA Zhang L., Thornton R., Coyle M., Francisco L., Jackson L., Javaid M., RA Korchina V., Kovar C., Mata R., Mathew T., Ngo R., Nguyen L., RA Nguyen N., Okwuonu G., Ongeri F., Pham C., Simmons D., RA Wilczek-Boney K., Hale W., Jakkamsetti A., Pham P., Ruth R., RA San Lucas F., Warren J., Zhang J., Zhao Z., Zhou C., Zhu D., Lee S., RA Bess C., Blankenburg K., Forbes L., Fu Q., Gubbala S., Hirani K., RA Jayaseelan J.C., Lara F., Munidasa M., Palculict T., Patil S., RA Pu L.-L., Saada N., Tang L., Weissenberger G., Zhu Y., Hemphill L., RA Shang Y., Youmans B., Ayvaz T., Ross M., Santibanez J., Aqrawi P., RA Gross S., Joshi V., Fowler G., Nazareth L., Reid J., Worley K., RA Petrosino J., Highlander S., Gibbs R.; RL Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFQD01000323; EGQ79094.1; -; Genomic_DNA. DR EnsemblBacteria; EGQ79094; EGQ79094; HMPREF9094_1876. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 87 AA; 10097 MW; E336C1C4FEE49E5A CRC64; MEELDLREKI CRAFTTDITV AGGAREAVIG NFFLALILIF STDSGLVVLI VIILFTFSHG YLVYLTKKDT KFFKVFRSHL KFKEYYY // ID F9H032_HAEHA Unreviewed; 118 AA. AC F9H032; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=TraD-like protein; GN ORFNames=GGC_1122, GGC_1154; OS Haemophilus haemolyticus M21621. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; OC Pasteurellaceae; Haemophilus. OX NCBI_TaxID=1028805; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=M21621; RX PubMed=21952546; DOI=10.1128/JB.05863-11; RA Jordan I.K., Conley A.B., Antonov I.V., Arthur R.A., Cook E.D., RA Cooper G.P., Jones B.L., Knipe K.M., Lee K.J., Liu X., Mitchell G.J., RA Pande P.R., Petit R.A., Qin S., Rajan V.N., Sarda S., Sebastian A., RA Tang S., Thapliyal R., Varghese N.J., Ye T., Katz L.S., Wang X., RA Rowe L., Frace M., Mayer L.W.; RT "Genome Sequences for Five Strains of the Emerging Pathogen RT Haemophilus haemolyticus."; RL J. Bacteriol. 193:5879-5880(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFQQ01000012; EGT79763.1; -; Genomic_DNA. DR EMBL; AFQQ01000012; EGT79795.1; -; Genomic_DNA. DR EnsemblBacteria; EGT79763; EGT79763; GGC_1122. DR EnsemblBacteria; EGT79795; EGT79795; GGC_1154. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 118 AA; 13430 MW; 08E8E4BE0E36314A CRC64; MSDLNESYPS FNGMNRPAMV LGVPMVAALF VLCFMVVSGF LGSFLNWGFY SLILPTIGAL YLFFLKIICE DDPNALAFIK WRLKAILIKQ AQGNPVILLT SDSKKREVYN ARRQFKKW // ID F9N5Y2_9FIRM Unreviewed; 90 AA. AC F9N5Y2; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=HMPREF9200_1232; OS Veillonella sp. oral taxon 780 str. F0422. OC Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; OC Veillonella. OX NCBI_TaxID=944564; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=F0422; RA Harkins D.M., Madupu R., Durkin A.S., Torralba M., Methe B., RA Sutton G.G., Nelson K.E.; RL Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFUJ01000041; EGS34655.1; -; Genomic_DNA. DR EnsemblBacteria; EGS34655; EGS34655; HMPREF9200_1232. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 90 AA; 10319 MW; 6BB129E084B645D0 CRC64; MKDTIPEGFE VPLHKSVAEP VLWMGLPRPI LFAISLTTIM LVVIFQISYM SLIAIILGIS AYIACLQLTN RDPEFYKVIL KNSVYKKHYY // ID F9RQM7_9VIBR Unreviewed; 105 AA. AC F9RQM7; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretion (PTiA6 VirB3); GN ORFNames=VIS19158_10894; OS Vibrio scophthalmi LMG 19158. OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; OC Vibrionaceae; Vibrio. OX NCBI_TaxID=870967; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=LMG 19158; RX PubMed=21930677; DOI=10.1099/ijs.0.032375-0; RA Hoffmann M., Monday S.R., Allard M.W., Strain E.A., Whittaker P., RA Naum M., McCarthy P.J., Lopez J.V., Fischer M., Brown E.W.; RT "Vibrio caribbeanicus sp. nov., isolated from the marine sponge RT Scleritoderma cyanea."; RL Int. J. Syst. Evol. Microbiol. 62:1736-1743(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFWE01000170; EGU33958.1; -; Genomic_DNA. DR EnsemblBacteria; EGU33958; EGU33958; VIS19158_10894. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 105 AA; 12213 MW; 02B8A2BE4CF3826E CRC64; MEQPIFKACT RTAMVASVPT KPLMVSNGLI ILAVMWLNFM FQIGLLWLVL VIPNYFFLRY LTKKDDAIFN LLWLKFQCRR SSARNADLHQ GAVYSPIEFK KRGQQ // ID F9S7U2_9VIBR Unreviewed; 122 AA. AC F9S7U2; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretion (PTiA6 VirB3); GN ORFNames=VII00023_20647; OS Vibrio ichthyoenteri ATCC 700023. OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; OC Vibrionaceae; Vibrio. OX NCBI_TaxID=870968; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 700023; RX PubMed=21930677; DOI=10.1099/ijs.0.032375-0; RA Hoffmann M., Monday S.R., Allard M.W., Strain E.A., Whittaker P., RA Naum M., McCarthy P.J., Lopez J.V., Fischer M., Brown E.W.; RT "Vibrio caribbeanicus sp. nov., isolated from the marine sponge RT Scleritoderma cyanea."; RL Int. J. Syst. Evol. Microbiol. 62:1736-1743(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFWF01000303; EGU30992.1; -; Genomic_DNA. DR EnsemblBacteria; EGU30992; EGU30992; VII00023_20647. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 122 AA; 13836 MW; DFD36869CC475360 CRC64; MFNINAHTVS VFLLGGAMNE PIFKACTRTA MIAGVPTKPL IVSVGIILLV VVWLNFLFYL PLLSLLILIP HYLVMRFIAK RDDAAFNLLW LKFLCRRKSG RNATFHNAAV YSPIEFKKRG KQ // ID F9XVP1_CAMFE Unreviewed; 929 AA. AC F9XVP1; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 16-APR-2014, entry version 7. DE SubName: Full=Fused VirB3/VirB4 protein; GN ORFNames=CFV354_1328; OS Campylobacter fetus subsp. venerealis NCTC 10354. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=983328; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NCTC 10354; RA Stynen A.P.R., Ruiz J.C., Rezende A.M., Moore R., Lage A.P.; RL Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM001228; EGU24313.1; -; Genomic_DNA. DR ProteinModelPortal; F9XVP1; -. DR EnsemblBacteria; EGU24313; EGU24313; CFV354_1328. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR018222; Nuclear_transport_factor_2_euk. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR PROSITE; PS50177; NTF2_DOMAIN; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 929 AA; 106777 MW; 971823A4D7D28C66 CRC64; MLVSEPIYKA LTRPPMVFGV PMVPFMMMAL GWALFAIFAK VLFGDVYLLL AVMIIPSIFV FQMIVKKDDM AFRLWGLKLR FFRSPSINKF YNGRKSYMAN STYSKQSLRN KYPKLSVVGL SEFANLENLI PYQTLIDNIV ITKEGDYLAS WRVDGIAFEV EDDELIDMNK NKLNMLVRQF AGENVSFYFH NARINTQVNQ KGYFSNEFLK NFAKKYYEIF SADNLKENRL YLTAIYSPLS RAEKMSFKNQ NIEAKKRQIR THLKSFNQKC NVIEQNLSHF KPYRLGVYDI EGVKFSSQLE LYNYLIGGKF TKVRVPNAPL DFYLNGNLNE IFPSQHTMQL NYNDGTRKFV KAIELKDYPN VSFSGIFDSL MYANVEYTIT QSFTPLSKKE ARDELTKQQK RLMAAEDDAI SQISELSSAL DELQSDIIFG EYHFSIVIYA DKQNECERIA NQIAVVLQDL GFLATQANIA LEATYFAQLP ANFMLRPRLH TISSKNYASF MALHNFPRGK QQGNPWGDAI AILQTPNGQP FFFNIHKTNF QKDEFGKNDV LANTFVLGQS GGGKTVLMNF TLNMLCKYNE LETFADSTPK DKRKATYFYL DKDKGALGNI MTIGGKYVMI TSGQPTGFNP FCCEATPENI RRLKVLMKML VTKGGQTHLM LTTRDEEQLN LAVDSVMRLE KSDRTHGVSR VWQLLQEGEN ETSSLKSRLM AWTIGNEFGW VFDNETDTLD FSDENILVYG IDGTDLLSDD EISPYVAYYI LWRIIDMVDG RRFGLFIDEA WDWLKNPVVS KEVFNKEKTI RKENGFLFLG TQSVEDIAKS DIGTAIMEQS ETILLLSNPK AKEDDYCRAL NMSEAEYQFV KTTIPEKYEF LIKKGVDYRA IAKINLSHLG NMVRVLSTSK DYVDELTKIN AMNIGYDEKY QLVKELYRF // ID F9YAT2_KETVW Unreviewed; 167 AA. AC F9YAT2; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 16-APR-2014, entry version 11. DE SubName: Full=Conjugal transfer protein TrbB; GN OrderedLocusNames=KVU_PA0064; OS Ketogulonicigenium vulgare (strain WSH-001). OG Plasmid pKVU_100. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Ketogulonicigenium. OX NCBI_TaxID=759362; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=WSH-001; RX PubMed=21994934; DOI=10.1128/JB.06007-11; RA Liu L., Li Y., Zhang J., Zhou Z., Liu J., Li X., Zhou J., Du G., RA Wang L., Chen J.; RT "Complete Genome Sequence of the Industrial Strain Ketogulonicigenium RT vulgare WSH-001."; RL J. Bacteriol. 193:6108-6109(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002019; AEM42484.1; -; Genomic_DNA. DR RefSeq; YP_005796695.1; NC_017386.1. DR EnsemblBacteria; AEM42484; AEM42484; KVU_PA0064. DR GeneID; 12375827; -. DR KEGG; kvl:KVU_PA0064; -. DR KO; K03198; -. DR BioCyc; KVUL759362:GLEX-2782-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 167 AA; 18313 MW; 373B5BE324541AFC CRC64; MGGAASEHPS VDRRAGRQDH CGNRHHRHRP GAGLRRYLGR FPPPDPDRLR PQHSLRRQLL LPVVLLVRRR GAHLMAGGLE QLDAVPGFSI PVHRALTEHI LLGGAPRSIA IVNGTLAGAV GLGLRLWLVG IAIWSVGHFL AVWAAKRDPL FVEVGRRHLR IPGHLSV // ID F9ZMR8_ACICS Unreviewed; 123 AA. AC F9ZMR8; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 16-APR-2014, entry version 8. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=Atc_1179; OS Acidithiobacillus caldus (strain SM-1). OC Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; OC Acidithiobacillaceae; Acidithiobacillus. OX NCBI_TaxID=990288; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=SM-1; RX PubMed=21703548; DOI=10.1016/j.jgg.2011.04.006; RA You X.Y., Guo X., Zheng H.J., Zhang M.J., Liu L.J., Zhu Y.Q., Zhu B., RA Wang S.Y., Zhao G.P., Poetsch A., Jiang C.Y., Liu S.J.; RT "Unraveling the Acidithiobacillus caldus complete genome and its RT central metabolisms for carbon assimilation."; RL J. Genet. Genomics 38:243-252(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002573; AEK57828.1; -; Genomic_DNA. DR RefSeq; YP_004748528.1; NC_015850.1. DR EnsemblBacteria; AEK57828; AEK57828; Atc_1179. DR GeneID; 10988965; -. DR KEGG; acu:Atc_1179; -. DR KO; K03198; -. DR BioCyc; ACAL990288:GJBS-1199-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 123 AA; 13722 MW; 1F9CAA6DE9B95D6E CRC64; MYQSLVRPHL LMGAERQATL LNAGFAMLVY FFTMSLPGIV VAVVLFSITQ AILQHLAKND SQMIAIVQRS RKYQPFYGDG ASLDAPYRDV PQFHTVAPTT KLLSWFTKAG KTKTQKSKVI AET // ID F9ZQJ4_ACICS Unreviewed; 110 AA. AC F9ZQJ4; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 16-APR-2014, entry version 8. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=Atc_2028; OS Acidithiobacillus caldus (strain SM-1). OC Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; OC Acidithiobacillaceae; Acidithiobacillus. OX NCBI_TaxID=990288; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=SM-1; RX PubMed=21703548; DOI=10.1016/j.jgg.2011.04.006; RA You X.Y., Guo X., Zheng H.J., Zhang M.J., Liu L.J., Zhu Y.Q., Zhu B., RA Wang S.Y., Zhao G.P., Poetsch A., Jiang C.Y., Liu S.J.; RT "Unraveling the Acidithiobacillus caldus complete genome and its RT central metabolisms for carbon assimilation."; RL J. Genet. Genomics 38:243-252(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002573; AEK58676.1; -; Genomic_DNA. DR RefSeq; YP_004749378.1; NC_015850.1. DR EnsemblBacteria; AEK58676; AEK58676; Atc_2028. DR GeneID; 10989813; -. DR KEGG; acu:Atc_2028; -. DR KO; K03198; -. DR BioCyc; ACAL990288:GJBS-2060-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 110 AA; 12945 MW; CA8CBD1C0AA2D431 CRC64; MQTGQSRAER LRTSTVHRSV IGKRRVLGVP FGYTVLNFSG MFSLAWFSQE WPIAVLAIFN FFLMRMLFKK EPSAVEIWFR YRAQAERYEP WPHASVKDHR GKLIGHTKAW // ID G0FHC2_ECOLX Unreviewed; 915 AA. AC G0FHC2; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 16-APR-2014, entry version 8. DE SubName: Full=IncX type IV secretion system protein VirB4; GN Name=virB4; ORFNames=UMNF18_pIncX026; OS Escherichia coli UMNF18. OG Plasmid pUMNF18_32. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=1050617; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=UMNF18; PLASMID=pUMNF18_32; RX PubMed=22081385; DOI=10.1128/JB.06225-11; RA Shepard S.M., Danzeisen J.L., Isaacson R.E., Seemann T., Achtman M., RA Johnson T.J.; RT "Genome Sequences and Phylogenetic Analysis of K88- and F18-Positive RT Porcine Enterotoxigenic Escherichia coli."; RL J. Bacteriol. 194:395-405(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGTD01000006; AEJ60273.1; -; Genomic_DNA. DR EnsemblBacteria; AEJ60273; AEJ60273; UMNF18_pIncX026. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 915 AA; 103909 MW; 5673EDB2919D190F CRC64; MSTLYKAMTR PAMYVGVPVV PLTVVAGALF LAGVYISKLI WLAIPVAVFI LRMITKQDDH IFNLYFLKLK MLGNSVCNRF FGARAFLSGQ YEAVEIDEFV NAMKLNERIT TGKYIPYSSH VDKNIVKTKN GDYVATWQLM GINFESISVE MLETIDSQVA TLVRSFSGLP VSFYNHSCRA SFYDAFTTKS GNKYADIISD CYYGSMKKNK FKGNTLYFTL IYRPDGRVEK LEKRKKSIKE KKDDINIHVK RMNEMINTFS GALDKFTCKL LGMYEENGKV FSSQLSFYNY LLTGKLQKIR VTDSPVYNVL GGVDVFFNHD TGQICRIDGN RFFRSIEIKD FCSETASGVF DVLQYSDADY IITHSYTSMS KSEALSTIKR AEKQLKSTED DAVTQLQELE KAKNDIVSGD ISFGYYHFTL MVMADSIREL DESVSKITAD FTDLGIIPAL STMSLPAAYF AQLPAVFHLR PRLSPVSNVN FVELASFHNF YQGKRDKNCW TEAVAILKTP SKQAYYLNLH NSVLFKDETG EKNLANTKVI GTAGSGKTMF LSYLACSLQK YNNPETFADS AKNKKLTCVF LDKDRGAELC IRMLGGEYYT VKSGEPTGWN PFALEATKRN RIFVKQLMEI LCTRNGERLS TRERLLISES VDAVMDFPPG EMREYGITRM LEHLMQRDDR DEQENGIILR LSQWANGQAH GWVFDNAKDT FNIQHVNNFG IDGTEFLDDP MVCAPITFYL LYRITQLLDG RRLVIFLDEF WKWLQDEAFS DFVYNKLKTI RKLNGLVIPA TQSPDEILKN KISRAVVEVC STSIYLANPD ADYNDYVEGL KLTPEEFNIV KNLDPMSRQF LIKKSSLKKG DGKSFSALAT LDLSGLGGYL KILSASADNL EIFESIYHEG MEPDDWVPEY LERAI // ID G0GWS1_RICH0 Unreviewed; 95 AA. AC G0GWS1; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 29-MAY-2013, entry version 8. DE SubName: Full=Type IV secretion system protein VirB3; GN OrderedLocusNames=Rh054_00825; OS Rickettsia heilongjiangensis (strain ATCC VR-1524 / 054). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=1032845; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC VR-1524 / 054; RX PubMed=21914880; DOI=10.1128/JB.05852-11; RA Duan C., Tong Y., Huang Y., Wang X., Xiong X., Wen B.; RT "Complete Genome Sequence of Rickettsia heilongjiangensis, an Emerging RT Tick-Transmitted Human Pathogen."; RL J. Bacteriol. 193:5564-5565(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002912; AEK74180.1; -; Genomic_DNA. DR RefSeq; YP_004763857.1; NC_015866.1. DR EnsemblBacteria; AEK74180; AEK74180; Rh054_00825. DR GeneID; 11013456; -. DR KEGG; rhe:Rh054_00825; -. DR KO; K03198; -. DR BioCyc; RHEI1032845:GI4V-148-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10780 MW; 7253E07C4A6101BC CRC64; MAGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNSIMILFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID G0JLI0_9GAMM Unreviewed; 106 AA. AC G0JLI0; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 22-JAN-2014, entry version 7. DE SubName: Full=Putative uncharacterized protein; GN ORFNames=Acife_1906; OS Acidithiobacillus ferrivorans SS3. OC Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; OC Acidithiobacillaceae; Acidithiobacillus. OX NCBI_TaxID=743299; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=SS3; RX PubMed=21705598; DOI=10.1128/JB.05373-11; RA Liljeqvist M., Valdes J., Holmes D.S., Dopson M.; RT "Draft Genome of the Psychrotolerant Acidophile Acidithiobacillus RT ferrivorans SS3."; RL J. Bacteriol. 193:4304-4305(2011). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=SS3; RG US DOE Joint Genome Institute; RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., RA Peters L., Mikhailova N., Teshima H., Detter J.C., Han C., Tapia R., RA Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Liljeqvist M., RA Valdes J., Holmes D., Dopson M., Woyke T.; RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002985; AEM48029.1; -; Genomic_DNA. DR RefSeq; YP_004784355.1; NC_015942.1. DR EnsemblBacteria; AEM48029; AEM48029; Acife_1906. DR GeneID; 11044362; -. DR KEGG; afi:Acife_1906; -. DR BioCyc; AFER743299:GH39-1935-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 106 AA; 11376 MW; 525CE52E50F23DEF CRC64; MSSTTGEVVL TRRIPIHSSL LRPQLLGGAE RELAIVNATL VAALIFGVGG VVGIGMGLVL GTAVHFMLTI AAKKDDKGMA VYRRQIHQQN FYAASSWVNA LHQLNH // ID G0K4Z2_STEMA Unreviewed; 102 AA. AC G0K4Z2; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 22-JAN-2014, entry version 9. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN ORFNames=BurJV3_2508; OS Stenotrophomonas maltophilia JV3. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Stenotrophomonas; OC Stenotrophomonas maltophilia group. OX NCBI_TaxID=868597; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=JV3; RG US DOE Joint Genome Institute; RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., RA Peters L., Ovchinnikova G., Teshima H., Detter J.C., Han C., Tapia R., RA Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Medau R., RA Furlan B., Mui Tsai S., Rodriques J., Tiedje J., Woyke T.; RT "Complete sequence of Stenotrophomonas maltophilia JV3."; RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002986; AEM51828.1; -; Genomic_DNA. DR RefSeq; YP_004793054.1; NC_015947.1. DR EnsemblBacteria; AEM51828; AEM51828; BurJV3_2508. DR GeneID; 11047271; -. DR KEGG; buj:BurJV3_2508; -. DR KO; K03198; -. DR BioCyc; SMAL868597:GHCG-2569-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 102 AA; 12113 MW; 90DC3DDCD2EA2528 CRC64; MHKNVVFRGC TRPAMFLGVP YLPFFMVAGG LLLLSMYTNF WFLLTIPVAV FIMRQMAKRD EMIFRLLGLR LMFKLKVRNV PEHDGMWVFN PNHYRDKPAR MD // ID G1CCR8_ECOLX Unreviewed; 917 AA. AC G1CCR8; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 16-APR-2014, entry version 7. DE SubName: Full=VirB3-4; DE SubName: Full=VirB3-4/ Pilx3-4; GN Name=virB3-4; ORFNames=E001_38; OS Escherichia coli. OG Plasmid pDKX1-TEM-52, and Plasmid pE001. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=562; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=2161; PLASMID=pE001; RX PubMed=21831988; DOI=10.1093/jac/dkr331; RA Bielak E., Bergenholtz R.D., Jorgensen M.S., Sorensen S.J., RA Hansen L.H., Hasman H.; RT "Investigation of diversity of plasmids carrying the blaTEM-52 gene."; RL J. Antimicrob. Chemother. 66:2465-2474(2011). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=7633094-7; PLASMID=pDKX1-TEM-52; RX PubMed=22470007; DOI=10.1016/j.plasmid.2012.03.001; RA Johnson T.J., Bielak E.M., Fortini D., Hansen L.H., Hasman H., RA Debroy C., Nolan L.K., Carattoli A.; RT "Expansion of the IncX plasmid family for improved identification and RT typing of novel plasmids in drug-resistant Enterobacteriaceae."; RL Plasmid 68:43-50(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JF776874; AEC32474.1; -; Genomic_DNA. DR EMBL; JQ269336; AFM46025.1; -; Genomic_DNA. DR RefSeq; YP_006953065.1; NC_019067.1. DR RefSeq; YP_006954341.1; NC_019096.1. DR GeneID; 13905970; -. DR GeneID; 13909493; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 917 AA; 105017 MW; A9A0B7EB9B5BCC38 CRC64; MSTLFKGLTR PALIRGLGVP LYPFLGMCII CVLLGVWIHE AMYALILPGW YAIRRVTQFD ERFFDLLYLR TLVKGHPLSN KRFSAVHYAG SQYDEVDISK VDNFMKLKDQ SSVEELIPYS SHITDNIIVT KNRDLLATWQ IDGAYFECVD SEDLSILTDQ LNTLIRSFEG KSVTLYPHRI RCKKDVRPVF NSKIPFVNRV MNDYYESFPQ SEFFENKLFL TICFKPFTTE DKVTHFFSRG KKQKDIFKEP VNEMNEICDR LNTYLSRFHS RRLGLYEDHG VVYSDQLSLF QYLLSGRWQK VRVSSSPFYT YLGGKDLFFG NDAGQITASD HARYFRCIEI KDYFQETDAG ILDALMYLPV EYVVTSSFTA MDKQSAIKAL DDQIDKLEMT DDAAKSLLAD LKVGLDMVSS GYISFGKSHQ TLVVFADSPE RLVKDTNIVT STLEDLGLIV TYSTLSLGAA YFAQLPGNYT LRPRLSTLSS LNFAEMESFH NFFSGKEKGN TWGEKLITLR GSGNDIYHLN YHMTTEHQNF FGKNPTLGHT EILGTSNVGK TVLLMTKAFA AQQFGTPESF PANRKLKKLT TVFFDKDRAG EVGIRAMGGS YYRVKEGEPT GWNPAALPPT KRNIAFMKDL VRLLCTLNSE PLDDYQNSLI SDAVERLMQR SDRSYPISKL RPLIQEPDDT ETKRHGLKAR LKPWTQGEEF GWVFDNREDT FDVDNLDVFG IDGTEFLDNK VLASAASFYL IYRVTMLADG RRLLIYMDEF WQWINNEAFR DFVYNKLKTG RKLDMVLVVA TQSPDELIKS PIAAAVREQC ATHIYLANPK AKRSEYVDGL QVRELYFDKI KAIDPLSRQF LVVKNPQRKG ESDDFAAFAR LELGKAAYYL PVLSASKPQL ELFDEIWKEG MKPEEWLDTY LEQANLI // ID G1CCV8_ECOLX Unreviewed; 105 AA. AC G1CCV8; DT 19-OCT-2011, integrated into UniProtKB/TrEMBL. DT 19-OCT-2011, sequence version 1. DT 13-NOV-2013, entry version 4. DE SubName: Full=TraA; GN Name=traA; OS Escherichia coli. OG Plasmid p271A. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=562; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=271; PLASMID=p271A; RX PubMed=21746951; DOI=10.1128/AAC.00165-11; RA Poirel L., Bonnin R.A., Nordmann P.; RT "Analysis of the Resistome of a Multidrug-Resistant NDM-1-Producing RT Escherichia coli Strain by High-Throughput Genome Sequencing."; RL Antimicrob. Agents Chemother. 55:4224-4229(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JF785549; AEK64813.1; -; Genomic_DNA. DR RefSeq; YP_004765021.1; NC_015872.1. DR GeneID; 11027516; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 105 AA; 12167 MW; 774FA6E9BDC94326 CRC64; MFENGQRPLF KGATRVPRLA GVPRTVALVI FMISATLFMT LHLWSLLVFA VLWSIAAALT KYDDRMFRIL SLWLQTKFRN AHDTPFKQWS GSSYSPVDYK KKELK // ID G1UPP1_9DELT Unreviewed; 98 AA. AC G1UPP1; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 19-MAR-2014, entry version 4. DE SubName: Full=Uncharacterized protein; GN ORFNames=HMPREF1022_00564; OS Desulfovibrio sp. 6_1_46AFAA. OC Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; OC Desulfovibrionaceae; Desulfovibrio. OX NCBI_TaxID=665942; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=6_1_46AFAA; RG The Broad Institute Genome Sequencing Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Daigneault M., Strauss J., RA Ambrose C.E., Allen-Vercoe E., Young S.K., Zeng Q., Gargeya S., RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M., RA Berlin A., Brown A., Chapman S.B., Chen Z., Dunbar C., Freedman E., RA Gearin G., Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., RA Howarth C., Larson L., Lui A., MacDonald P.J.P., Mehta T., RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Desulfovibrio sp. 6_1_46AFAA."; RL Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACWM01000016; EGW52486.1; -; Genomic_DNA. DR EnsemblBacteria; EGW52486; EGW52486; HMPREF1022_00564. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 11124 MW; 4248270296CBBF6C CRC64; MRRFLPIHQS LHRHAHVLGA ERELVMTSAL IALLVGVGGL TAVSILSAVF FWIVSVFALR RMAKADPIMS RVWLRHVKQQ EFYPAKANRW RAVGGFKC // ID G2GWR0_9ENTR Unreviewed; 123 AA. AC G2GWR0; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretory pathway protein; GN ORFNames=Rin_00001940; OS Candidatus Regiella insecticola R5.15. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; aphid secondary symbionts; Candidatus Regiella. OX NCBI_TaxID=1005043; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=R5.15; RX PubMed=21948522; DOI=10.1101/gr.125351.111; RA Hansen A.K., Vorburger C., Moran N.A.; RT "Genomic basis of endosymbiont-conferred protection against an insect RT parasitoid."; RL Genome Res. 22:106-114(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGCA01000037; EGY29815.1; -; Genomic_DNA. DR EnsemblBacteria; EGY29815; EGY29815; Rin_00001940. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 123 AA; 14061 MW; 8BEEA221B09AFA70 CRC64; MKKEAEQLEF DSHNGMSRIP LFWGVPIFPL LLCFVGTLVF GVSGFSAFGG WGGLLALPFL SVGIALRIVC EKDDKYLRRL HFMLRRLRLN RTLGKSLFVT PQNPKWSQYY GRRYAKVRFS GGD // ID G2GYV9_9ENTR Unreviewed; 85 AA. AC G2GYV9; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretory pathway, TrbD component; GN ORFNames=Rin_00009690; OS Candidatus Regiella insecticola R5.15. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; aphid secondary symbionts; Candidatus Regiella. OX NCBI_TaxID=1005043; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=R5.15; RX PubMed=21948522; DOI=10.1101/gr.125351.111; RA Hansen A.K., Vorburger C., Moran N.A.; RT "Genomic basis of endosymbiont-conferred protection against an insect RT parasitoid."; RL Genome Res. 22:106-114(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGCA01000247; EGY29072.1; -; Genomic_DNA. DR EnsemblBacteria; EGY29072; EGY29072; Rin_00009690. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 85 AA; 9982 MW; 8B69F63998460958 CRC64; MGGDREMVMF SGLLSAILIL AAQDWNAAII GTFVWFAAIW ILRKMAKADP KMRFVYLRNR QYKPYYPARS TPYRINTISQ EKQYK // ID G2H1P2_9ENTR Unreviewed; 169 AA. AC G2H1P2; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretory pathway protein; GN ORFNames=Rin_00019850; OS Candidatus Regiella insecticola R5.15. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; aphid secondary symbionts; Candidatus Regiella. OX NCBI_TaxID=1005043; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=R5.15; RX PubMed=21948522; DOI=10.1101/gr.125351.111; RA Hansen A.K., Vorburger C., Moran N.A.; RT "Genomic basis of endosymbiont-conferred protection against an insect RT parasitoid."; RL Genome Res. 22:106-114(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGCA01000464; EGY28092.1; -; Genomic_DNA. DR EnsemblBacteria; EGY28092; EGY28092; Rin_00019850. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 169 AA; 19427 MW; DF09D53375439CB8 CRC64; MADFSLKWGH GDDLDGLFQT DLCGSVSGRG YLDWDGGLAV FRGNWPANNE ANQWEFDSYN GMSRVPLFWG VPIFPLLLCF VSTLVFGMGG FSVFGVWGSF LALPFILVGI ALRIVCEKDD KYLRRLYFML KRLRLNFRFG QSLFVTPQNP KWSQYYGRRY AKVRFSRGD // ID G2I152_GLUMN Unreviewed; 91 AA. AC G2I152; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 14-MAY-2014, entry version 12. DE SubName: Full=Conjugal transfer protein TrbD; GN Name=trbD; OrderedLocusNames=GLX_22480; OS Gluconacetobacter medellinensis (strain NBRC 3288 / BCRC 11682 / LMG OS 1693 / Kondo 51). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Acetobacteraceae; Komagataeibacter. OX NCBI_TaxID=634177; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NBRC 3288 / BCRC 11682 / LMG 1693; RX PubMed=22123756; DOI=10.1128/JB.06158-11; RA Ogino H., Azuma Y., Hosoyama A., Nakazawa H., Matsutani M., RA Hasegawa A., Otsuyama K., Matsushita K., Fujita N., Shirai M.; RT "Complete genome sequence of NBRC 3288, a unique cellulose- RT nonproducing strain of Gluconacetobacter xylinus isolated from RT vinegar."; RL J. Bacteriol. 193:6997-6998(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP012159; BAK84660.1; -; Genomic_DNA. DR RefSeq; YP_004869030.1; NC_016027.1. DR EnsemblBacteria; BAK84660; BAK84660; GLX_22480. DR GeneID; 11166029; -. DR KEGG; gxy:GLX_22480; -. DR KO; K03198; -. DR BioCyc; GXYL634177:GHBT-2312-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 91 AA; 9879 MW; 3C551D6A89D0F2FC CRC64; MAGYDDDAVP GFHVPVHRSL TDPILLGGAP RTLAIANGTL GAAISLGLRL WLVGAVFWII GHTLAVWGAK RDPLFVEVGR RHLRYPAWLR A // ID G2IJA8_9SPHN Unreviewed; 94 AA. AC G2IJA8; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 22-JAN-2014, entry version 9. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=SLG_26030; OS Sphingobium sp. SYK-6. OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Sphingobium. OX NCBI_TaxID=627192; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=SYK-6; RA Masai E., Kamimura N., Kasai D., Oguchi A., Ankai A., Fukui S., RA Takahashi M., Yashiro I., Sasaki H., Harada T., Nakamura S., RA Katano Y., Narita-Yamada S., Nakazawa H., Hara H., Katayama Y., RA Fukuda M., Yamazaki S., Fujita N.; RT "Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a Degrader RT of Lignin-Derived Biaryls and Monoaryls."; RL J. Bacteriol. 194:534-535(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP012222; BAK67278.1; -; Genomic_DNA. DR RefSeq; YP_004835735.1; NC_015976.1. DR EnsemblBacteria; BAK67278; BAK67278; SLG_26030. DR GeneID; 11142771; -. DR KEGG; ssy:SLG_26030; -. DR KO; K03198; -. DR BioCyc; SSP627192:GI2Q-2644-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 94 AA; 9803 MW; 6861CD1633340B0E CRC64; MPASPHIAGA HIEGFEAPIH GALGSPILLG GAPRMIAIVN GTIAAAIGLG LQQWVAGLVL WAAGHSLAVF AARRDPDFAP VLIRHLRQRS HFTC // ID G2ILW8_9SPHN Unreviewed; 93 AA. AC G2ILW8; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 22-JAN-2014, entry version 9. DE SubName: Full=Type IV secretory pathway TrbD component; GN ORFNames=SLG_30360; OS Sphingobium sp. SYK-6. OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Sphingobium. OX NCBI_TaxID=627192; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=SYK-6; RA Masai E., Kamimura N., Kasai D., Oguchi A., Ankai A., Fukui S., RA Takahashi M., Yashiro I., Sasaki H., Harada T., Nakamura S., RA Katano Y., Narita-Yamada S., Nakazawa H., Hara H., Katayama Y., RA Fukuda M., Yamazaki S., Fujita N.; RT "Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a Degrader RT of Lignin-Derived Biaryls and Monoaryls."; RL J. Bacteriol. 194:534-535(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP012222; BAK67711.1; -; Genomic_DNA. DR RefSeq; YP_004836168.1; NC_015976.1. DR EnsemblBacteria; BAK67711; BAK67711; SLG_30360. DR GeneID; 11144919; -. DR KEGG; ssy:SLG_30360; -. DR KO; K03198; -. DR BioCyc; SSP627192:GI2Q-3081-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9962 MW; 28F31BDADF7D7FEF CRC64; MTGAADLAEP IAGFYAPVHR ALTEPILLGG APRSLAIVNG TLAGAIGLGL RLWIAGLAIW AIGHALSVWA ARRDPQFVDV ARRHLRYPAW MRP // ID G2IU17_9SPHN Unreviewed; 116 AA. AC G2IU17; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 22-JAN-2014, entry version 10. DE SubName: Full=Type IV secretory pathway VirB3 component; GN Name=virB3; ORFNames=SLG_p_01040; OS Sphingobium sp. SYK-6. OG Plasmid DNA. OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Sphingobium. OX NCBI_TaxID=627192; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=SYK-6; RX PubMed=22207743; DOI=10.1128/JB.06254-11; RA Masai E., Kamimura N., Kasai D., Oguchi A., Ankai A., Fukui S., RA Takahashi M., Yashiro I., Sasaki H., Harada T., Nakamura S., RA Katano Y., Narita-Yamada S., Nakazawa H., Hara H., Katayama Y., RA Fukuda M., Yamazaki S., Fujita N.; RT "Complete genome sequence of Sphingobium sp. strain SYK-6, a degrader RT of lignin-derived biaryls and monoaryls."; RL J. Bacteriol. 194:534-535(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP012223; BAK68692.1; -; Genomic_DNA. DR RefSeq; YP_004831224.1; NC_015974.1. DR EnsemblBacteria; BAK68692; BAK68692; SLG_p_01040. DR GeneID; 11135940; -. DR KEGG; ssy:SLG_p_01040; -. DR KO; K03198; -. DR BioCyc; SSP627192:GI2Q-4075-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 116 AA; 12636 MW; B3A9E7474F94B66E CRC64; MKESAALDER LREETLFLAV TRPTMWLGVP LEASLPIALA ACLTLIVSGN PLYAGAIGGA CLAVARLIVR HDANAFRLLW LWTMTKARSR NRAWWGGSSY SPLPVAGLKR KGFARG // ID G2J8B1_9BURK Unreviewed; 112 AA. AC G2J8B1; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Putative conjugal transfer protein trbD; GN ORFNames=CAGGBEG34_200006; OS Candidatus Glomeribacter gigasporarum BEG34. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Candidatus Glomeribacter. OX NCBI_TaxID=1070319; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=BEG34; RA Ghignone S., Salvioli A., Anca I., Lumini E., Ortu G., Petiti L., RA Cruveiller S., Bianciotto V., Piffanelli P., Lanfranco L., RA Bonfante P.; RT "The genome of the obligate endobacterium of an arbuscular mycorrhizal RT fungus reveals an interphylum network of nutritional interactions."; RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAFB01000037; CCD29008.1; -; Genomic_DNA. DR EnsemblBacteria; CCD29008; CCD29008; CAGGBEG34_200006. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 112 AA; 12979 MW; 0BC3D6E0D0339072 CRC64; MSEQNPHNPF TPVPIHASGV RPLTFMGGER TPVLAGLFFC FYCAFFISLR YRVWIGVPVG VVLWMGWLAM TRAMTKADPQ MWQILRRHRS YRAFYPARGR LNAPGPVYRD FK // ID G2TBQ4_RHORU Unreviewed; 89 AA. AC G2TBQ4; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 22-JAN-2014, entry version 8. DE SubName: Full=Conjugal transfer protein; GN ORFNames=F11_04140; OS Rhodospirillum rubrum F11. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Rhodospirillaceae; Rhodospirillum. OX NCBI_TaxID=1036743; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=F11; RX PubMed=22194448; DOI=10.1128/JB.06319-11; RA Lonjers Z.T., Dickson E.L., Chu T.P., Kreutz J.E., Neacsu F.A., RA Anders K.R., Shepherd J.N.; RT "Identification of a New Gene Required for the Biosynthesis of RT Rhodoquinone in Rhodospirillum rubrum."; RL J. Bacteriol. 194:965-971(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003046; AEO47298.1; -; Genomic_DNA. DR RefSeq; YP_006047095.1; NC_017584.1. DR EnsemblBacteria; AEO47298; AEO47298; F11_04140. DR GeneID; 12641924; -. DR KEGG; rrf:F11_04140; -. DR KO; K03198; -. DR BioCyc; RRUB1036743:GLJ7-850-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 89 AA; 9541 MW; 30D398532049CA58 CRC64; MAGTDPIDGF SVPVHRALTE PILLGGAPRT LAIANATLAA AIALGLRLWI PGLVLWLLGH GAAVWAAKHD AQFVEVIRRH LRYPAYLRA // ID G3CA91_MORMO Unreviewed; 917 AA. AC G3CA91; DT 16-NOV-2011, integrated into UniProtKB/TrEMBL. DT 16-NOV-2011, sequence version 1. DT 16-APR-2014, entry version 6. DE SubName: Full=PilX3-4 protein, T4SS fused VirB3 & VIrB4 components; GN Name=pilX3-4; ORFNames=R485_28; OS Morganella morganii (Proteus morganii). OG Plasmid R485. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Morganella. OX NCBI_TaxID=582; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=M203; PLASMID=R485; RA Norman A.; RT "Genetic Characterizations of IncX-plasmids of the RT Enterobacteriaceae."; RL Thesis (2009), University of Copenhagen. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=M203; PLASMID=R485; RA Norman A.; RL Submitted (JUL-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HE577112; CCC86529.1; -; Genomic_DNA. DR RefSeq; YP_004869686.1; NC_016036.1. DR GeneID; 11179242; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 917 AA; 104966 MW; 18DDA08A0397ECE0 CRC64; MSTLFKGLTR PALIRGLGVP LYPFLGMCII CVLLGVWIHE AMYALILPGW YAIRRVTQFD ERFFDLLYLR TLVKGHSLSN KRFSAVHYAG SQYDEVDISK VDNFMKLKDQ SSVEELIPYS SHITDNIIVT KNRDLLATWQ IDGAYFECVD SEDLSILTDQ LNTLIRSFEG KSVTLYPHRI RCKKDVRPVF NSKIPFVNRV MNDYYESFPQ SEFFENKLFL TICFKPFTTE DKVTHFFSRG KKQKDIFKEP VNEMNEICDR LNTYLSRFHS RRLGLYEDHG VVYSDQLSLF QYLLSGRWQK VRVSSSPFYT YLGGKDLFFG NDAGQITASD HARYFRCIEI KDYFQETDAG ILDALMYLPV EYVVTSSFTA MDKQSAIKAL DDQIDKLEMT DDAAKSLLAD LKVGLDMVSS GYISFGKSHQ TLVVFADSPE RLVKDTNIVT STLEDLGLIV TYSTLSLGAA YFAQLPGNYT LRPRLSTLSS LNFAEMESFH NFFSGKEKGN TWGEKLITLR GSGNDIYHLN YHMTTEHQNF FGKNPTLGHT EILGTSNVGK TVLLMTKAFA AQQFGTPESF PANRKLKKLT TVFFDKDRAG EVGIRAMGGS YYRVTEGEPT GWNPAALPPT KRNIAFMKDL VRLLCTLNSE PLDDYQNSLI SDAVERLMQR SDRSYPISKL RPLIQEPDDT ETKRHGLKAR LKPWTQGEEF GWVFDNREDT FDVDNLDVFG IDGTEFLDNK VLASAASFYL IYRVTMLADG RRLLIYMDEF WQWINNEAFR DFVYNKLKTG RKLDMVLVVA TQSPDELIKS PIAAAVREQC ATHIYLANPK AKRSEYVDGL QVRELYFDKI KAIDPLSRQF LVVKNPQRKG ESDDFAAFAR LELGKAAYYL PVLSASKPQL ELFDDIWKEG MKPEEWLDTY LEQANLI // ID G3Z1G2_9NEIS Unreviewed; 143 AA. AC G3Z1G2; DT 14-DEC-2011, integrated into UniProtKB/TrEMBL. DT 14-DEC-2011, sequence version 1. DT 19-MAR-2014, entry version 4. DE SubName: Full=Uncharacterized protein; GN ORFNames=HMPREF1028_00427; OS Neisseria sp. GT4A_CT1. OC Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; OC Neisseriaceae; Neisseria. OX NCBI_TaxID=665946; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=GT4A_CT1; RG The Broad Institute Genome Sequencing Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Strauss J., Daigneault M., RA Ambrose C.E., Allen-Vercoe E., Young S.K., Zeng Q., Gargeya S., RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M., RA Berlin A., Brown A., Chapman S.B., Chen Z., Dunbar C., Freedman E., RA Gearin G., Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., RA Howarth C., Larson L., Lui A., MacDonald P.J.P., Mehta T., RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Neisseria sp. GT4A_CT1."; RL Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACWS01000016; EGY62777.1; -; Genomic_DNA. DR EnsemblBacteria; EGY62777; EGY62777; HMPREF1028_00427. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 143 AA; 16396 MW; 61D2C37E31200B10 CRC64; MNGLPEIDID TEYSSYEGLS RVAMLAGVPI IPGFIILVVF MAIAMFLMPV YELKAFGIFL LALPCIYFLR MLMKRDDQAL RILGLEIYWW FVRRKSNLFG DTLTITATKF GRDRDDYIRF IKEETEEAAA AAKLFSESQS ARC // ID G3ZBA9_AGGAC Unreviewed; 927 AA. AC G3ZBA9; DT 14-DEC-2011, integrated into UniProtKB/TrEMBL. DT 14-DEC-2011, sequence version 1. DT 16-APR-2014, entry version 8. DE SubName: Full=ATPase; GN ORFNames=D17P3_1350; OS Aggregatibacter actinomycetemcomitans D17P-3. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; OC Pasteurellaceae; Aggregatibacter. OX NCBI_TaxID=754505; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=D17P-3; RA Kittichotirat W., Bumgarner R.E., Chen C.; RL Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADOA01000117; EGY70444.1; -; Genomic_DNA. DR EnsemblBacteria; EGY70444; EGY70444; D17P3_1350. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR003593; AAA+_ATPase. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SMART; SM00382; AAA; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 927 AA; 105848 MW; A4052FAD0B279E52 CRC64; MISKDPLFKA LTRPAMFLGV PLVPFFMAFA VCILFAIYTE VRYFIFFFPL FGVLRLITKI DEKIFQLYGI KRYLIGLRIR ASGFKKLFYG TYYTSQDFSK ERVKKTSVSD KGDYTVLDLE KAIPLKKIIP YSSLISEDVV LSKDGIYSAT WEIEGISYET RNDEDIDRYK NSLNTLIRSL ATENISIYTH NARLFSTLKS NHTFKDGFAK DVNDTYVQSF KDIDFMENSL FFTICYNPKK GLDKINKKAQ SKDERLEDIE LNLQHFNEIA NRVGNALDKF GANRLTTYEK YDVMYSQQLE FYNFILTGNY QPVRVLNYPI YSYLGNVDMI MAKDTAEINV NGKLSYVRGI EIKDWVQDTH AGFLDSLIGL NCRYILTQSF SIVPKTEALT LIDRQLKQLR STEDDGISQQ DALLLAKDEL VSGNVCFGDH HFTLMLYADS LKEVQKISTE AFDKLSDLGF IVSLSNIALD EAYLSQLPCN FKFRPRVSMI SSKNFVGLNS LHNNPVGKAT NNCWGNAITL LKTNTNTPFY FNFHQTRLGR NDFGDMHLGH TAILGKSGTG KTVLATFLLS QCTAFSNPDT FPKNSLNKKF TAIYLDKDYG AEIAVRAMGG KYNRLKNGQP TGFNPFMLEK NEPNITFLNN FIALLATSDG STLSTKDKED INFAVRAVMD LDKEYRAEGI SRLLENIQKD VENENSLERR LRIWKKGGIY GWVFDNETDS LSFNEYDIYG FDGTEVLDNP AVINPLAFYL LFRVQQILDG RRVVVFLDEF WKWLQSDSFS EFAYDGLKTM RKKNGFIVPI TQSPDEIIKS KIARAIIEQV ETFIFLPNSK ADYHEYTHEF KVSEKEYSII KNLEDDSRMF LVKKGSENDS RGNTVVAKLD LSALDRGSMK VLSGSADNVA ILDKIVSEVG ENPQDWLPIF KAEMMNN // ID G3ZGB3_AGGAC Unreviewed; 923 AA. AC G3ZGB3; DT 14-DEC-2011, integrated into UniProtKB/TrEMBL. DT 14-DEC-2011, sequence version 1. DT 16-APR-2014, entry version 6. DE SubName: Full=ATPase; GN ORFNames=D17P2_0583; OS Aggregatibacter actinomycetemcomitans D17P-2. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; OC Pasteurellaceae; Aggregatibacter. OX NCBI_TaxID=754506; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=D17P-2; RX PubMed=23194436; RA Huang Y., Kittichotirat W., Mayer M.P., Hall R., Bumgarner R., RA Chen C.; RT "Comparative genomic hybridization and transcriptome analysis with a RT pan-genome microarray reveal distinctions between JP2 and non-JP2 RT genotypes of Aggregatibacter actinomycetemcomitans."; RL Mol. Oral. Microbiol. 28:1-17(2013). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADOB01000013; EGY75628.1; -; Genomic_DNA. DR EnsemblBacteria; EGY75628; EGY75628; D17P2_0583. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 923 AA; 104688 MW; 6A8FC895F220DC70 CRC64; MQADSENTIS GEPLFKGMIT QATIGGIPIP IIFAIAFLSG LAYFISGKIY MVLPAIPLLV GARLMYEADK DFLTLNMLNF KINSGLGKII RFFGSKTFTA QKYNRTAFSE NRIETLGIKL SEQKDYSKFI PYSSHVAPNV VITRNGDLVT TWCCKGIAFE TEDDYKLGLS KESLNALIQS FSKKGISFYQ HNVRHKVNET LDGYFESDFS REINDKYYAG FNNGTLQRNI LYITLVYTPY SKLEKISRKT SKLKDKKQEL AYQLETMQEM CARLDKALED FRGEALTTFS KGGVLYSEQL SFYNYLISGR WQPIRVTSTP FYNLLSNADL HFGKDTGQIN CHGQSRFFRC IEIIDYTETT CEGFFDALMY VKADYVITQS FQSMPNNTAQ DKLERQQKRL SSSNEAAISQ IDNLTVALDD LASGRLSFGY YHFCMMVYGD SVQDVTDKTN EIFAILERLG LMVTLANTAL AASYFGQFPA NFAYRPRLAM LSSKNYASLT SLHNFAGGKR DGNPWGDAVT MLITTNNQPY YFNFHQSEFN VDDRGEKRLG NTMVLGQAGA GKTMLMTFLI NQLQKFNHTS TFLPTSVKRE LTTVYLDKDY GAEACIRAMG GKYMLIRKGV PSGFNPFICE NTPENLSFLS TLMKMLVTRN GKTLSSLDEE ELYKAIKSVM EFSPEYRSYP ISRVIEHLPE GSTKAEKENS LARRLKNWAQ SGEFGWVFDN PADTLDFTGH SVFGIDGTEF LDDPDTSAPL SFYLLHRITQ LLDGRRLGIF MDEYWKWIKH DAFTDFSENK AKTIRKEDGF IVPITQSPHE VLKSPIARAI IEQCETMICL PNPQAKKNEY VDGFNISEKQ FEIVRDLKPN SRTFLIRKGL ETTLAKLDLS GLGRENLKIL STSKDNAEIL HQILEEVGEA ANDWIPIYKQ RCV // ID G3ZIB3_AGGAC Unreviewed; 927 AA. AC G3ZIB3; DT 14-DEC-2011, integrated into UniProtKB/TrEMBL. DT 14-DEC-2011, sequence version 1. DT 16-APR-2014, entry version 8. DE SubName: Full=ATPase; GN ORFNames=D17P2_1303; OS Aggregatibacter actinomycetemcomitans D17P-2. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; OC Pasteurellaceae; Aggregatibacter. OX NCBI_TaxID=754506; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=D17P-2; RX PubMed=23194436; RA Huang Y., Kittichotirat W., Mayer M.P., Hall R., Bumgarner R., RA Chen C.; RT "Comparative genomic hybridization and transcriptome analysis with a RT pan-genome microarray reveal distinctions between JP2 and non-JP2 RT genotypes of Aggregatibacter actinomycetemcomitans."; RL Mol. Oral. Microbiol. 28:1-17(2013). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADOB01000029; EGY74958.1; -; Genomic_DNA. DR EnsemblBacteria; EGY74958; EGY74958; D17P2_1303. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR003593; AAA+_ATPase. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SMART; SM00382; AAA; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 927 AA; 105669 MW; 791A28215F1CA6BA CRC64; MISKDPLFKA LTRPAMFLGV PLVPFFMAFA VCILIAIYTE VRYFIFFFPL FGVLRLITKI DEKIFQLYGI KRYLIGLRIR ASGFKKLFYG TYYTSQDFSK ERVKKTSVSD KGDYTVLDLE KAIPLKKIIP YSSLISEDVV LSKDGIYSAT WEIEGISYET RNDEDIDRYK NSLNTLVRSL ATENISIYTH NARLFSTLKS NHTFKDGFAK DVNDTYVQSF KNIDFMENSL FFTICYNPKK GLDTINKKAQ SKDERLEDIE LNLQHFNEIA NRVGNALDKF GASRLTTYEK DDVMYSQQLE FYNFILTGNY QPVRVLNYPI YSYLGNVDMV MAKDTAEINV NGKLSYVRGI EIKDWVQDTH AGFLDSLIGL NCRYILTQSF SIVPKTEALT LIDRQLKQLR STEDDGISQQ DALLLAKDEL VSGNVCFGDH HFTLMLYADS LKEVQKISTE AFDKLSDLGF IVSLSNIALD EAYLSQLPCN FKFRPRVSMI SSKNFVGLNS LHNNPVGKAT NNCWGNAITL LKTNTNTPFY FNFHQTRLGR NDFGDMHLGH TAILGKSGTG KTVLATFLLS QCTAFSNPDT FPKNSLNKKF TAIYLDKDYG AEIAVRAMGG KYNRLKNGQP TGFNPFMLEK NEPNITFLNN FIALLATSDG STLSTKDKED INFAVRAVMD LDKEYRAEGI SRLLENIQKD VDNENSLERR LRIWKKGGIY GWVFDNETDS LSFNEYDIYG FDGTEVLDNP AVINPLAFYL LFRVQQILDG RRVVVFLDEF WKWLQSDSFS EFAYDGLKTM RKKNGFIVPI TQSPDEIIKS KIARAIIEQV ETFIFLPNSK ADYHEYTHEF KVSEKEYSII KNLEDDSRMF LVKKGSENDS RGNTVVAKLD LSALDRGSMK VLSGSADNVA ILDKIVSEVG ENPQDWLPIF KAEMMNN // ID G4A6F8_AGGAC Unreviewed; 923 AA. AC G4A6F8; DT 14-DEC-2011, integrated into UniProtKB/TrEMBL. DT 14-DEC-2011, sequence version 1. DT 16-APR-2014, entry version 6. DE SubName: Full=ATPase; GN ORFNames=SC1083_0398; OS Aggregatibacter actinomycetemcomitans serotype e str. SC1083. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; OC Pasteurellaceae; Aggregatibacter. OX NCBI_TaxID=907488; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=SC1083; RA Chen C., Kittichotirat W., Asikainen S., Bumgarner R.; RL Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEJM01000013; EGY34773.1; -; Genomic_DNA. DR EnsemblBacteria; EGY34773; EGY34773; SC1083_0398. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 923 AA; 104539 MW; D97F2A3165308BCB CRC64; MQADSENTIS GEPLFKGMIT QATISGIPIP IIFVIAFLSG LAYFISGKLY AVLPAIPLLI GTRLLYETDR DFLTLNMLNF KTNSGLGKIV RFFGSKTFTA QKYNRTAFSE NRIETLGIKL SEQKDYSKFI PYSSHIAPNV VITRNGDLVA TWCCKGVTFE TAENYELNLS KEKLNTLIQS FSKKGVSFYQ HNIRHKVNET LDGHFSSEFT QEVNDKYYAG FNNGTLQRNI LYVTLVYTPY SKLEKISRKT SKLKDKKQEL AYQLETMQEM CSRLDKALED FRGEALTTFS KGGALYSEQL SFYNYLITNR WQPVRVTSTS FYHLLGNTDL HFGKETGQIT FNGESRFFRC LEIKDYTEET CEGFFDALMY INADYVITQS FQSMPSNVAK EKLDRQQKRL NSSNEAAISQ VDNLTVALDD LASGRLSFGY YHFGMMVYGD SIKDVTDKTN EIIAVLSSLG LIITLANTAL SASYFGQFPA NFAYRPRLAM LSSRNYASLT SLHNFASGKR NGNPWGDAVT LLKTPNGQPY YFNFHQSAPG VDDRGEKRLG NTAVFGQAGS GKTMLMTFLM TQLDKFRHTS TFLPTSVKRE LTMVYLDKDY GAEACIRAMG GKYMLIRKGA PTGFNPFMCE NTPENLSFLS TLMKMLVTRN GRMLSSLDEE ELFKAVKSVM EFDMEYRSYP ISRVIEHLPE GSTKAEKENS LARRLKNWAQ GGEFGWVFDN PADTLDFTGH AVFGIDGTEF LDDQDTCSPL SFYLLHRIGK LLDGRRLIIF MDEFWKWLKD EAFSDFAYNK LKVIRKEDGI VIPMTQSMDE VLKSPISRAV VEECETTICL PNPIARKVDY VDGFGISEKQ FEIIRELQPD SRTFLVRKGL ETALAKLDLS GLGRENLKIL STSKDNAEIL HQIIDEVGEA ANDWIPIYKQ RCV // ID G4B3A2_AGGAC Unreviewed; 72 AA. AC G4B3A2; DT 14-DEC-2011, integrated into UniProtKB/TrEMBL. DT 14-DEC-2011, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=ATPase; GN ORFNames=I23C_2221; OS Aggregatibacter actinomycetemcomitans serotype b str. I23C. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; OC Pasteurellaceae; Aggregatibacter. OX NCBI_TaxID=907492; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=I23C; RX PubMed=23194436; RA Huang Y., Kittichotirat W., Mayer M.P., Hall R., Bumgarner R., RA Chen C.; RT "Comparative genomic hybridization and transcriptome analysis with a RT pan-genome microarray reveal distinctions between JP2 and non-JP2 RT genotypes of Aggregatibacter actinomycetemcomitans."; RL Mol. Oral. Microbiol. 28:1-17(2013). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEJQ01000260; EGY49045.1; -; Genomic_DNA. DR EnsemblBacteria; EGY49045; EGY49045; I23C_2221. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 72 AA; 7834 MW; 462F91DBE06C2E7B CRC64; MQADSENTIS GEPLFKGMIT QATISGIPIP IIFVIAFLSG LAYFISGKLY AVLPAIPLLI GTRLLYETDR DF // ID G4BAX5_AGGAC Unreviewed; 275 AA. AC G4BAX5; DT 14-DEC-2011, integrated into UniProtKB/TrEMBL. DT 14-DEC-2011, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Type IV secretion system protein VirB4; GN ORFNames=SCC2302_2283; OS Aggregatibacter actinomycetemcomitans serotype c str. SCC2302. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; OC Pasteurellaceae; Aggregatibacter. OX NCBI_TaxID=907493; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=SCC2302; RX PubMed=23194436; RA Huang Y., Kittichotirat W., Mayer M.P., Hall R., Bumgarner R., RA Chen C.; RT "Comparative genomic hybridization and transcriptome analysis with a RT pan-genome microarray reveal distinctions between JP2 and non-JP2 RT genotypes of Aggregatibacter actinomycetemcomitans."; RL Mol. Oral. Microbiol. 28:1-17(2013). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEJR01000091; EGY44831.1; -; Genomic_DNA. DR EnsemblBacteria; EGY44831; EGY44831; SCC2302_2283. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 275 AA; 32005 MW; 97113183EE1B5175 CRC64; MNRDPLFKAL TRPAMFLGVP LTPFFLTFAS FLLFAIYTKI YYFIFFLPAF GALRLISSYD EKIFQLYGIR MWLMPARLKA AKFKRLFGGN YYTGSNFARN IYRKKPISDK GDYTMLDLEK AISLEKIIPY SSQIDEDVIL TKDGIFTTTF EVEGISYETR GDDELDRFKL SLNILIRSLA QDNISIYVNS VRRFSDLKSD NQFDNGFAKD INEKYVTSFS KSDFMENNLF FTVALKPYRG IDKVNVKQQS KKKNFPTFKL ISRILKNCLV VLKTH // ID G4CSI8_9NEIS Unreviewed; 143 AA. AC G4CSI8; DT 14-DEC-2011, integrated into UniProtKB/TrEMBL. DT 14-DEC-2011, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=TagB3 protein; GN ORFNames=HMPREF9370_2048; OS Neisseria wadsworthii 9715. OC Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; OC Neisseriaceae; Neisseria. OX NCBI_TaxID=1030841; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=9715; RA Muzny D., Qin X., Deng J., Jiang H., Liu Y., Qu J., Song X.-Z., RA Zhang L., Thornton R., Coyle M., Francisco L., Jackson L., Javaid M., RA Korchina V., Kovar C., Mata R., Mathew T., Ngo R., Nguyen L., RA Nguyen N., Okwuonu G., Ongeri F., Pham C., Simmons D., RA Wilczek-Boney K., Hale W., Jakkamsetti A., Pham P., Ruth R., RA San Lucas F., Warren J., Zhang J., Zhao Z., Zhou C., Zhu D., Lee S., RA Bess C., Blankenburg K., Forbes L., Fu Q., Gubbala S., Hirani K., RA Jayaseelan J.C., Lara F., Munidasa M., Palculict T., Patil S., RA Pu L.-L., Saada N., Tang L., Weissenberger G., Zhu Y., Hemphill L., RA Shang Y., Youmans B., Ayvaz T., Ross M., Santibanez J., Aqrawi P., RA Gross S., Joshi V., Fowler G., Nazareth L., Reid J., Worley K., RA Petrosino J., Highlander S., Gibbs R.; RL Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGAZ01000068; EGZ44698.1; -; Genomic_DNA. DR EnsemblBacteria; EGZ44698; EGZ44698; HMPREF9370_2048. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 143 AA; 16560 MW; 13976938CAC04F64 CRC64; MQNLPDINID TEYNTYEGLS RQATVWGIPM IPAITIVGIF VLIALFTMQF LDLKAFAILL MAVPFLVFLK LMTQRDDQAI NIIALELYWL FQRRNANLFG DTFTVLPTKF GRERNDYYRF VREDTDEAAI AARLFAPVQS SRR // ID G4KM22_RICJY Unreviewed; 95 AA. AC G4KM22; DT 14-DEC-2011, integrated into UniProtKB/TrEMBL. DT 14-DEC-2011, sequence version 1. DT 03-APR-2013, entry version 7. DE SubName: Full=Type IV secretory pathway, virB3-like protein; GN Name=virB3; OrderedLocusNames=RJP_0107; OS Rickettsia japonica (strain ATCC VR-1363 / YH). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=652620; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC VR-1363 / YH; RA Matsutani M., Ogawa M., Kishimoto T., Azuma Y., Hattori M., RA Hanaoka N., Takaoka N., Hirakawa H., Kuhara S., Shirai M.; RT "Complete genome sequence of Rickettsia japonica YH strain."; RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP011533; BAK96330.1; -; Genomic_DNA. DR RefSeq; YP_004884469.1; NC_016050.1. DR EnsemblBacteria; BAK96330; BAK96330; RJP_0107. DR GeneID; 11232455; -. DR KEGG; rja:RJP_0107; -. DR KO; K03198; -. DR BioCyc; RJAP652620:GJUC-107-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10780 MW; 7253E07C4A6101BC CRC64; MAGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNSIMILFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID G4LIV7_PSEAI Unreviewed; 89 AA. AC G4LIV7; DT 14-DEC-2011, integrated into UniProtKB/TrEMBL. DT 14-DEC-2011, sequence version 1. DT 22-JAN-2014, entry version 8. DE SubName: Full=Conjugal transfer protein; GN ORFNames=NCGM2_0843; OS Pseudomonas aeruginosa NCGM2.S1. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. OX NCBI_TaxID=1089456; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NCGM2.S1; RA Miyoshi-Akiyama T., Kuwahara T., Tada T., Kitao T., Kirikae T.; RT "Complete Genome Sequence of Highly Multidrug-Resistant Pseudomonas RT aeruginosa NCGM2.S1, a Representative Strain of a Cluster Endemic to RT Japan."; RL J. Bacteriol. 193:7010-7010(2011). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NCGM2.S1; RA Akiyama T., Kuwahara T., Ando T., Tada T., Kirikae T.; RL Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP012280; BAK87726.1; -; Genomic_DNA. DR RefSeq; YP_005979111.1; NC_017549.1. DR EnsemblBacteria; BAK87726; BAK87726; NCGM2_0843. DR GeneID; 12570633; -. DR KEGG; pnc:NCGM2_0843; -. DR KO; K03198; -. DR BioCyc; PAER1089456:GLIR-843-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 89 AA; 9566 MW; 46E8ACFD7C69F9B4 CRC64; MSKATDLPGF EVPLHRSLTE PILLGGAPRT VAIANGTLAA AVGLGLQLWI PGVVLWIVGH SLAVWGARVD PQFMQVFARH IKHRPLLDV // ID G4PJU9_BRUML Unreviewed; 116 AA. AC G4PJU9; DT 14-DEC-2011, integrated into UniProtKB/TrEMBL. DT 14-DEC-2011, sequence version 1. DT 22-JAN-2014, entry version 9. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=BMNI_II0064; OS Brucella melitensis NI. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=1029825; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NI; RX PubMed=23105063; DOI=10.1128/JB.01595-12; RA Liu W., Jing Z., Ou Q., Cui B., He Y., Wu Q.; RT "Complete Genome Sequence of Brucella melitensis Biovar 3 Strain NI, RT Isolated from an Aborted Bovine Fetus."; RL J. Bacteriol. 194:6321-6321(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002932; AEQ09774.1; -; Genomic_DNA. DR RefSeq; YP_005660453.1; NC_017283.1. DR ProteinModelPortal; G4PJU9; -. DR EnsemblBacteria; AEQ09774; AEQ09774; BMNI_II0064. DR GeneID; 12244591; -. DR KEGG; bmw:BMNI_II0064; -. DR KO; K03198; -. DR BioCyc; BMEL1029825:GL9Q-2189-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID G4RAT7_PELHB Unreviewed; 89 AA. AC G4RAT7; DT 14-DEC-2011, integrated into UniProtKB/TrEMBL. DT 14-DEC-2011, sequence version 1. DT 14-MAY-2014, entry version 12. DE SubName: Full=Conjugative transfer protein TrbD; GN OrderedLocusNames=KKY_3589; OS Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Hyphomicrobiaceae; Pelagibacterium. OX NCBI_TaxID=1082931; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=JCM 15775 / CGMCC 1.7692 / B2; RX PubMed=22156395; DOI=10.1128/JB.06343-11; RA Huo Y.Y., Cheng H., Han X.F., Jiang X.W., Sun C., Zhang X.Q., RA Zhu X.F., Liu Y.F., Li P.F., Ni P.X., Wu M.; RT "Complete Genome Sequence of Pelagibacterium halotolerans B2T."; RL J. Bacteriol. 194:197-198(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003075; AEQ53573.1; -; Genomic_DNA. DR RefSeq; YP_004901323.1; NC_016078.1. DR EnsemblBacteria; AEQ53573; AEQ53573; KKY_3589. DR GeneID; 11342605; -. DR KEGG; phl:KKY_3589; -. DR KO; K03198; -. DR OMA; GAVFWIV; -. DR BioCyc; PHAL1082931:GJXT-3582-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 89 AA; 9481 MW; 564C69BF8B4C4283 CRC64; MEGAGEIPGF YAPVHRALVE PILLGGAPRA IAIANGTLAA AVGLGLRLWV VGIALWLVGH LLAVWAAKHD AQIVDVVRRH LRFPTWFGV // ID G4RD02_PELHB Unreviewed; 85 AA. AC G4RD02; DT 14-DEC-2011, integrated into UniProtKB/TrEMBL. DT 14-DEC-2011, sequence version 1. DT 14-MAY-2014, entry version 12. DE SubName: Full=Conjugative transfer protein TrbD; GN OrderedLocusNames=KKY_2779; OS Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Hyphomicrobiaceae; Pelagibacterium. OX NCBI_TaxID=1082931; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=JCM 15775 / CGMCC 1.7692 / B2; RX PubMed=22156395; DOI=10.1128/JB.06343-11; RA Huo Y.Y., Cheng H., Han X.F., Jiang X.W., Sun C., Zhang X.Q., RA Zhu X.F., Liu Y.F., Li P.F., Ni P.X., Wu M.; RT "Complete Genome Sequence of Pelagibacterium halotolerans B2T."; RL J. Bacteriol. 194:197-198(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003075; AEQ52785.1; -; Genomic_DNA. DR RefSeq; YP_004900535.1; NC_016078.1. DR EnsemblBacteria; AEQ52785; AEQ52785; KKY_2779. DR GeneID; 11343416; -. DR KEGG; phl:KKY_2779; -. DR KO; K03198; -. DR OMA; WAIGHIA; -. DR BioCyc; PHAL1082931:GJXT-2774-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 85 AA; 9280 MW; 0DB8A409990ABC96 CRC64; MPIAGYFVPV HRAVTEQILM GGVPRAIAIT NGTLAAAIGL GLQLWVAGLV LFVLGHSVAL WTTRRDAQFV DVARRHLRYP GYLRV // ID G4T4I6_META2 Unreviewed; 103 AA. AC G4T4I6; DT 14-DEC-2011, integrated into UniProtKB/TrEMBL. DT 14-DEC-2011, sequence version 1. DT 11-DEC-2013, entry version 10. DE SubName: Full=Putative conjugal transfer protein TrbD; GN OrderedLocusNames=MEALZ_p0032; OS Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM OS B-2133 / 20Z). OG Plasmid MEALZ_p. OC Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; OC Methylococcaceae; Methylomicrobium. OX NCBI_TaxID=1091494; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z; PLASMID=MEALZ_p; RX PubMed=22207753; DOI=10.1128/JB.06392-11; RA Vuilleumier S., Khmelenina V.N., Bringel F., Reshetnikov A.S., RA Lajus A., Mangenot S., Rouy Z., Op den Camp H.J., Jetten M.S., RA Dispirito A.A., Dunfield P., Klotz M.G., Semrau J.D., Stein L.Y., RA Barbe V., Medigue C., Trotsenko Y.A., Kalyuzhnaya M.G.; RT "Genome sequence of the haloalkaliphilic methanotrophic bacterium RT Methylomicrobium alcaliphilum 20Z."; RL J. Bacteriol. 194:551-552(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FO082061; CCE25742.1; -; Genomic_DNA. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 103 AA; 11968 MW; E361F71CA083DB87 CRC64; MAGRTIPIRR AGNRDNLFMG GDRELVMFSG LLAGALIFSA QDMRATVFGV CLWFGALFVF RLMAKSDPKL RYVYLRSRRY KKYYPPRSTP FRDNTNTQGR QYQ // ID G5GMA6_9FIRM Unreviewed; 90 AA. AC G5GMA6; DT 25-JAN-2012, integrated into UniProtKB/TrEMBL. DT 25-JAN-2012, sequence version 1. DT 19-MAR-2014, entry version 4. DE SubName: Full=Uncharacterized protein; GN ORFNames=HMPREF9334_00387; OS Selenomonas infelix ATCC 43532. OC Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; OC Selenomonas. OX NCBI_TaxID=679201; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC 43532; RG The Broad Institute Genome Sequencing Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Izard J., Blanton J.M., RA Baranova O.V., Dewhirst F.E., Young S.K., Zeng Q., Gargeya S., RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M., RA Berlin A., Brown A., Chapman S.B., Chen Z., Dunbar C., Freedman E., RA Gearin G., Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., RA Howarth C., Larson L., Lui A., MacDonald P.J.P., Montmayeur A., RA Murphy C., Neiman D., Pearson M., Priest M., Roberts A., Saif S., RA Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., Wortman J., RA Nusbaum C., Birren B.; RT "The Genome Sequence of Selenomonas infelix ATCC 43532."; RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACZM01000003; EHG22351.1; -; Genomic_DNA. DR EnsemblBacteria; EHG22351; EHG22351; HMPREF9334_00387. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 90 AA; 10634 MW; 56CAE5C1818ABD87 CRC64; MADRETEVSS WYDAAFFRGL MEPALLAGVP KPVLIWNAMF AVFLILNFGF FYILIFTFLL HFLAIYVCKS DVQFFDCIKS YMNKKRYYNT // ID G5Q9J4_SALMO Unreviewed; 104 AA. AC G5Q9J4; DT 25-JAN-2012, integrated into UniProtKB/TrEMBL. DT 25-JAN-2012, sequence version 1. DT 03-APR-2013, entry version 6. DE SubName: Full=Conjugative transfer protein TrbD; GN ORFNames=LTSEMON_5105; OS Salmonella enterica subsp. enterica serovar Montevideo str. S5-403. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella. OX NCBI_TaxID=913242; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=S5-403; RX PubMed=21859443; DOI=10.1186/1471-2164-12-425; RA den Bakker H.C., Moreno Switt A.I., Govoni G., Cummings C.A., RA Ranieri M.L., Degoricija L., Hoelzer K., Rodriguez-Rivera L.D., RA Brown S., Bolchacova E., Furtado M.R., Wiedmann M.; RT "Genome sequencing reveals diversification of virulence factor content RT and possible host adaptation in distinct subpopulations of Salmonella RT enterica."; RL BMC Genomics 12:425-425(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFCS01001140; EHC73872.1; -; Genomic_DNA. DR EnsemblBacteria; EHC73872; EHC73872; LTSEMON_5105. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 104 AA; 11030 MW; 1EBD251BD1014A91 CRC64; MSKATDLPGF EVPLHRSLTE PILLGGAPRT TPRTVAIANG GAPRTVAIAN GTLAAAVGLG LQLWIPGVVL WIVGHSLAVW GARVDPQFMQ VFARHIKHRP LLDV // ID G5QCI4_SALMO Unreviewed; 105 AA. AC G5QCI4; DT 25-JAN-2012, integrated into UniProtKB/TrEMBL. DT 25-JAN-2012, sequence version 1. DT 03-APR-2013, entry version 6. DE SubName: Full=Type IV secretion of T-DNA complex VirB3; GN ORFNames=LTSEMON_6419; OS Salmonella enterica subsp. enterica serovar Montevideo str. S5-403. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella. OX NCBI_TaxID=913242; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=S5-403; RX PubMed=21859443; DOI=10.1186/1471-2164-12-425; RA den Bakker H.C., Moreno Switt A.I., Govoni G., Cummings C.A., RA Ranieri M.L., Degoricija L., Hoelzer K., Rodriguez-Rivera L.D., RA Brown S., Bolchacova E., Furtado M.R., Wiedmann M.; RT "Genome sequencing reveals diversification of virulence factor content RT and possible host adaptation in distinct subpopulations of Salmonella RT enterica."; RL BMC Genomics 12:425-425(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFCS01001424; EHC71375.1; -; Genomic_DNA. DR EnsemblBacteria; EHC71375; EHC71375; LTSEMON_6419. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 105 AA; 12167 MW; 774FA6E9BDC94326 CRC64; MFENGQRPLF KGATRVPRLA GVPRTVALVI FMISATLFMT LHLWSLLVFA VLWSIAAALT KYDDRMFRIL SLWLQTKFRN AHDTPFKQWS GSSYSPVDYK KKELK // ID G5SXF4_HAEHA Unreviewed; 40 AA. AC G5SXF4; DT 25-JAN-2012, integrated into UniProtKB/TrEMBL. DT 25-JAN-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Putative type IV secretion system, VirB3 / TrbD; GN ORFNames=GGE_1606; OS Haemophilus haemolyticus M21639. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; OC Pasteurellaceae; Haemophilus. OX NCBI_TaxID=1028806; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=M21639; RX PubMed=21952546; DOI=10.1128/JB.05863-11; RA Jordan I.K., Conley A.B., Antonov I.V., Arthur R.A., Cook E.D., RA Cooper G.P., Jones B.L., Knipe K.M., Lee K.J., Liu X., Mitchell G.J., RA Pande P.R., Petit R.A., Qin S., Rajan V.N., Sarda S., Sebastian A., RA Tang S., Thapliyal R., Varghese N.J., Ye T., Katz L.S., Wang X., RA Rowe L., Frace M., Mayer L.W.; RT "Genome Sequences for Five Strains of the Emerging Pathogen RT Haemophilus haemolyticus."; RL J. Bacteriol. 193:5879-5880(2011). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AFQR01000029; EGT80727.1; -; Genomic_DNA. DR EnsemblBacteria; EGT80727; EGT80727; GGE_1606. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 40 AA; 4549 MW; B3CA845D5911618E CRC64; MSDLNESYPS FNGMNRPAMV FGVPMVAALF VLFLWLHQAF // ID G6C5A4_9FUSO Unreviewed; 88 AA. AC G6C5A4; DT 25-JAN-2012, integrated into UniProtKB/TrEMBL. DT 25-JAN-2012, sequence version 1. DT 13-NOV-2013, entry version 4. DE SubName: Full=Uncharacterized protein; GN ORFNames=HMPREF9093_01751; OS Fusobacterium sp. oral taxon 370 str. F0437. OC Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; OC Fusobacterium. OX NCBI_TaxID=861452; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=F0437; RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., RA Courtney L., Fronick C., Harrison M., Strong C., Farmer C., RA Delahaunty K., Markovic C., Hall O., Minx P., Tomlinson C., RA Mitreva M., Hou S., Chen J., Wollam A., Pepin K.H., Johnson M., RA Bhonagiri V., Zhang X., Suruliraj S., Warren W., Chinwalla A., RA Mardis E.R., Wilson R.K.; RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGAD01000214; EHI77778.1; -; Genomic_DNA. DR EnsemblBacteria; EHI77778; EHI77778; HMPREF9093_01751. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 88 AA; 10199 MW; 6B13568F8ADFB1BD CRC64; MENELDLRER ICRAFTTDIT VAGGAREAVI ANFFLALILI FSTDSGLVIL SIIIVFTFSH GYIVYLTKKD TKFFKVFKSH LKFKDYYY // ID G6EA08_9SPHN Unreviewed; 93 AA. AC G6EA08; DT 25-JAN-2012, integrated into UniProtKB/TrEMBL. DT 25-JAN-2012, sequence version 1. DT 13-NOV-2013, entry version 5. DE SubName: Full=Type IV secretion system protein VirB3; GN Name=virB3; ORFNames=NSU_1179; OS Novosphingobium pentaromativorans US6-1. OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Novosphingobium. OX NCBI_TaxID=1088721; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=US6-1; RX PubMed=22275104; DOI=10.1128/JB.06476-11; RA Luo Y.R., Kang S.G., Kim S.J., Kim M.R., Li N., Lee J.H., Kwon K.K.; RT "Genome sequence of benzo(a)pyrene-degrading bacterium Novosphingobium RT pentaromativorans US6-1."; RL J. Bacteriol. 194:907-907(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGFM01000014; EHJ61865.1; -; Genomic_DNA. DR EnsemblBacteria; EHJ61865; EHJ61865; NSU_1179. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 93 AA; 10548 MW; 2E701CF69DF340F6 CRC64; MSLARYPVHR ALTRPQMFAG VTYSFFIINA AVTTEIFLIT KSFWALPAAL AIHGVGYLAC LREPRVFDLW IAKVSKCPRV ANWQRWGCNS YAP // ID G6ELD7_9SPHN Unreviewed; 114 AA. AC G6ELD7; DT 25-JAN-2012, integrated into UniProtKB/TrEMBL. DT 25-JAN-2012, sequence version 1. DT 13-NOV-2013, entry version 5. DE SubName: Full=VirB3 type IV secretion protein; GN Name=virB3; ORFNames=NSU_pLA2011; OS Novosphingobium pentaromativorans US6-1. OG Plasmid pLA2. OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Novosphingobium. OX NCBI_TaxID=1088721; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=US6-1; PLASMID=pLA2; RX PubMed=22275104; DOI=10.1128/JB.06476-11; RA Luo Y.R., Kang S.G., Kim S.J., Kim M.R., Li N., Lee J.H., Kwon K.K.; RT "Genome sequence of benzo(a)pyrene-degrading bacterium Novosphingobium RT pentaromativorans US6-1."; RL J. Bacteriol. 194:907-907(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGFM01000123; EHJ57818.1; -; Genomic_DNA. DR EnsemblBacteria; EHJ57818; EHJ57818; NSU_pLA2011. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 114 AA; 12304 MW; DEFB07D9EA0DDCFA CRC64; MDGQEEMTKD PLFLAVTRPA LWAGVPIEAG ALIIMAGAIT LVGSGNPLYG GAAAVALYAM ARLIVRHDVN AFRLIFLWGR TKAANRNRVF WGGSSYTPLP LYGIKRKGFG RGVR // ID G6XM47_9PROT Unreviewed; 94 AA. AC G6XM47; DT 25-JAN-2012, integrated into UniProtKB/TrEMBL. DT 25-JAN-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Putative conjugal transfer protein trbD; GN ORFNames=GMO_25650; OS Gluconobacter morbifer G707. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Acetobacteraceae; Gluconobacter. OX NCBI_TaxID=1088869; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=G707; RA Lee W.-J., Kim E.-K.; RT "Genome sequence of Gluconobacter morbifer G707, isolated from RT Drosophila gut."; RL Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGQV01000012; EHH67135.1; -; Genomic_DNA. DR EnsemblBacteria; EHH67135; EHH67135; GMO_25650. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 94 AA; 10238 MW; E9113D379CF8F4F5 CRC64; MAVLFDPEAE AVPGYFVPVH RSLTEPILLG GAPRAVAIAN GTLASAIALG LRLWLVGAVF WIVGHTLAIW GAKRDPLFIE VGRRHLRYPA WLRA // ID G6Y1V0_RHIRD Unreviewed; 99 AA. AC G6Y1V0; DT 25-JAN-2012, integrated into UniProtKB/TrEMBL. DT 25-JAN-2012, sequence version 1. DT 03-APR-2013, entry version 5. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=ATCR1_24505; OS Agrobacterium tumefaciens CCNWGS0286. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=1082932; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=CCNWGS0286; RX PubMed=22636006; DOI=10.1128/AEM.01200-12; RA Hao X., Xie P., Johnstone L., Miller S.J., Rensing C., Wei G.; RT "Genome Sequence and Mutational Analysis of Plant-Growth-Promoting RT Bacterium Agrobacterium tumefaciens CCNWGS0286 Isolated from a Zinc- RT Lead Mine Tailing."; RL Appl. Environ. Microbiol. 78:5384-5394(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGSM01000029; EHH02384.1; -; Genomic_DNA. DR EnsemblBacteria; EHH02384; EHH02384; ATCR1_24505. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 99 AA; 11251 MW; 03155A6955A03D45 CRC64; MAEAGSNLIR SRVHRALSRP NLLMGADREL VLLTALAAVI LIFVVLTWYA ALFGAAIWLV TVAALRTMAK ADPLMRRVYI RHISYKAFYR STSSPWRRY // ID G6YJ71_9RHIZ Unreviewed; 105 AA. AC G6YJ71; DT 25-JAN-2012, integrated into UniProtKB/TrEMBL. DT 25-JAN-2012, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Conjugal transfer protein; GN ORFNames=MEA186_30242; OS Mesorhizobium amorphae CCNWGS0123. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Phyllobacteriaceae; Mesorhizobium. OX NCBI_TaxID=1082933; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=CCNWGS0123; RX PubMed=22247533; DOI=10.1128/JB.06475-11; RA Hao X., Lin Y., Johnstone L., Baltrus D.A., Miller S.J., Wei G., RA Rensing C.; RT "Draft Genome Sequence of Plant Growth-Promoting Rhizobium RT Mesorhizobium amorphae, Isolated from Zinc-Lead Mine Tailings."; RL J. Bacteriol. 194:736-737(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGSN01000216; EHH05203.1; -; Genomic_DNA. DR EnsemblBacteria; EHH05203; EHH05203; MEA186_30242. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 105 AA; 11615 MW; FC5FFCBB293E7D52 CRC64; MIGVADGRID PGEPRLLITP LVKGLTRAPT VLGIPYELAG FIGVLTAVVF LATHNLIMLC ICVPLYAVAR IAIMRDPMFI EIMFIRSRKM PPRSASFWGA RSYRV // ID G7QB62_9DELT Unreviewed; 92 AA. AC G7QB62; DT 25-JAN-2012, integrated into UniProtKB/TrEMBL. DT 25-JAN-2012, sequence version 1. DT 22-JAN-2014, entry version 4. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN ORFNames=DFW101_2800; OS Desulfovibrio sp. FW1012B. OC Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; OC Desulfovibrionaceae; Desulfovibrio. OX NCBI_TaxID=644968; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=FW1012B; RG US DOE Joint Genome Institute; RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., RA Peters L., Chertkov O., Held B., Detter J.C., Han C., Tapia R., RA Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., RA Hazen T.C., Fields M.W., Hwang C., Ramsay B., Arkin A.P., Dehal P., RA Chivian D., Criddle C.S., Carroll S.L., Wu W., Woyke T.; RT "Complete sequence of chromosome Desulfovibrio sp. FW1012B."; RL Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM001368; EHJ48804.1; -; Genomic_DNA. DR EnsemblBacteria; EHJ48804; EHJ48804; DFW101_2800. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 92 AA; 10599 MW; 0981386FE1F42EB0 CRC64; MRTTPIHQAL HRPNHVMGAE REVALSICLL AFLVGVGGMT WFSGMTAILL YLTGLMFARR MAKHDPLMSK VWMRHIKQQV YYAPKSSLWR KN // ID G7UNQ7_PSEUP Unreviewed; 94 AA. AC G7UNQ7; DT 25-JAN-2012, integrated into UniProtKB/TrEMBL. DT 25-JAN-2012, sequence version 1. DT 03-APR-2013, entry version 7. DE SubName: Full=Type IV secretion system protein; GN OrderedLocusNames=DSC_10185; OS Pseudoxanthomonas spadix (strain BD-a59). OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Pseudoxanthomonas. OX NCBI_TaxID=1045855; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BD-a59; RX PubMed=22207748; DOI=10.1128/JB.06436-11; RA Lee S.H., Jin H.M., Lee H.J., Kim J.M., Jeon C.O.; RT "Complete Genome Sequence of the BTEX-Degrading Bacterium RT Pseudoxanthomonas spadix BD-a59."; RL J. Bacteriol. 194:544-544(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003093; AER56681.1; -; Genomic_DNA. DR RefSeq; YP_004930722.1; NC_016147.2. DR EnsemblBacteria; AER56681; AER56681; DSC_10185. DR GeneID; 11375917; -. DR KEGG; psd:DSC_10185; -. DR KO; K03198; -. DR BioCyc; PSPA1045855:GH5V-1854-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 94 AA; 9966 MW; 301042B8006634EE CRC64; MSAANEGVPG FASGFEIPLH RSLTEPILMG GAPRTVAIAN GTLAAAVGLG LQLWIPGAVL WIFGHSLAVW GARVDPQFMQ VFARHIKHKP LLDV // ID G8GYF9_ECOLX Unreviewed; 915 AA. AC G8GYF9; DT 25-JAN-2012, integrated into UniProtKB/TrEMBL. DT 25-JAN-2012, sequence version 1. DT 16-APR-2014, entry version 5. DE SubName: Full=Pilx3-4; GN Name=pilx3-4; OS Escherichia coli. OG Plasmid pJIE143. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=562; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=JIE143; PLASMID=pJIE143; RX PubMed=21911569; DOI=10.1128/AAC.00639-11; RA Partridge S.R., Ellem J.A., Tetu S.G., Zong Z., Paulsen I.T., RA Iredell J.R.; RT "Complete Sequence of pJIE143, a pir-Type Plasmid Carrying ISEcp1- RT blaCTX-M-15 from an Escherichia coli ST131 Isolate."; RL Antimicrob. Agents Chemother. 55:5933-5935(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JN194214; AEQ61765.1; -; Genomic_DNA. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 915 AA; 103873 MW; 50291F0088E53A00 CRC64; MSTLYKAMTR PAMYVGVPVV PLTVVAGALF LAGVYISKLI WLAIPVAVFV LRMITKQDDH IFNLYFLKLK MLGNSVCNRF FGARAFLSGQ YEAVEIDEFV NAMKLNERIT TGKYIPYSSH VDKNIVKTKN GDYVATWQLM GINFESISAE MLETIDSQVA TLVRSFSGLP VSFYNHSCRA SFYDAFTTKS GNKYADIISD CYYGSMKKNK FKGNTLYFTL IYRPDGRVEK LEKRKKSIKE KKDDINIHVK RMNEMINTFS GALDKFTCKL LGMYEENGKV FSSQLSFYNY LLTGKLQKIR VTDSPVYNVL GGVDVFFNHD TGQICRIDGN KFFRSIEIKD FCSETASGVF DVLQYSDADY IITHSYTSMS KSEALSTIKR AEKQLKSTED DAVTQFQELE KAKNDIVSGD ISFGYYHFTL MVMADSIREL DESVSKITAD FTDLGIIPAL STMSLPAAYF AQLPAVFHLR PRLSPVSNVN FVELASFHNF YQGKRDKNCW TEAVAILKTP SKQAYYLNLH NSVLFKDETG EKNLANTKVI GTAGSGKTMF LSYLACSLQK YNNPETFADS AKNKKLTCVF LDKDRGAELC IRMLGGEYYT VKSGEPTGWN PFALEATKRN RIFVKQLMEI LCTRNGERLS TRERLLISES VDAVMDFPPG EMREYGITRM LEHLMQRDDR DEQENGIILR LSQWANGQAH GWVFDNAKDT FNIQHVNNFG IDGTEFLDDP MVCAPITFYL LYRITQLLDG RRLVIFLDEF WKWLQDEAFS DFVYNKLKTI RKLNGLVIPA TQSPDEILKN KISRAVVEVC STSIYLANPD ADYNDYVEGL KLTPEEFNIV KNLDPMSRQF LIKKSSLKKG DGKSFSALAT LDLSGLGGYL KILSASADNL EIFESIYHEG MEPDDWVPEY LERAI // ID G8L9E6_RICS1 Unreviewed; 95 AA. AC G8L9E6; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 14-MAY-2014, entry version 10. DE SubName: Full=VirB3; GN Name=virB3; OrderedLocusNames=Rsl_170; OS Rickettsia slovaca (strain 13-B). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=941638; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=13-B; RX PubMed=22374949; DOI=10.1128/JB.06625-11; RA Fournier P.E., El Karkouri K., Robert C., Medigue C., Raoult D.; RT "Complete genome sequence of Rickettsia slovaca, the agent of tick- RT borne lymphadenitis."; RL J. Bacteriol. 194:1612-1612(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002428; AEV91813.1; -; Genomic_DNA. DR RefSeq; YP_005065381.1; NC_016639.1. DR EnsemblBacteria; AEV91813; AEV91813; Rsl_170. DR GeneID; 11581692; -. DR KEGG; rsv:Rsl_170; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR BioCyc; RSLO941638:GJCO-143-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10750 MW; 7253E0673CBA777C CRC64; MAGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID G8MQK5_9BURK Unreviewed; 100 AA. AC G8MQK5; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 22-JAN-2014, entry version 8. DE SubName: Full=Type IV secretion system VirB3; GN Name=virB3; ORFNames=BYI23_F000690; OS Burkholderia sp. YI23. OG Plasmid byi_3p. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia. OX NCBI_TaxID=1097668; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=YI23; PLASMID=byi_3p; RX PubMed=22275096; DOI=10.1128/JB.06479-11; RA Lim J.S., Choi B.S., Choi A.Y., Kim K.D., Kim D.I., Choi I.Y., RA Ka J.O.; RT "Complete Genome Sequence of the Fenitrothion-Degrading Burkholderia RT sp. Strain YI23."; RL J. Bacteriol. 194:896-896(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003092; AET95620.1; -; Genomic_DNA. DR RefSeq; YP_004980407.1; NC_016592.1. DR EnsemblBacteria; AET95620; AET95620; BYI23_F000690. DR GeneID; 11537748; -. DR KEGG; byi:BYI23_F000690; -. DR KO; K03198; -. DR BioCyc; BSP1097668:GKEO-7864-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 100 AA; 11022 MW; E199BEEEC4C9F8B9 CRC64; MSADEQLHDD EGESLVAAMT RPTMIGGLTL ASLAMSFYIP GMAAMIARSV VPAIAVPFLL LGSYLVCLKD VYLFDILAAA THLKTCPNKR FWRCRRYAPR // ID G8MTW2_AGGAC Unreviewed; 923 AA. AC G8MTW2; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 16-APR-2014, entry version 9. DE SubName: Full=ATPase; GN ORFNames=ANH9381_2228; OS Aggregatibacter actinomycetemcomitans ANH9381. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; OC Pasteurellaceae; Aggregatibacter. OX NCBI_TaxID=754507; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ANH9381; RX PubMed=22408240; DOI=10.1128/JB.06770-11; RA Chen C., Kittichotirat W., Chen W., Downey J.S., Bumgarner R.; RT "Genome Sequence of a Serotype b Non-JP2 Aggregatibacter RT actinomycetemcomitans Strain, ANH9381, from a Periodontally Healthy RT Individual."; RL J. Bacteriol. 194:1837-1837(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003099; AEW78108.1; -; Genomic_DNA. DR RefSeq; YP_004949852.1; NC_016513.1. DR EnsemblBacteria; AEW78108; AEW78108; ANH9381_2228. DR GeneID; 11490825; -. DR KEGG; aao:ANH9381_2228; -. DR KO; K03199; -. DR BioCyc; AACT754507:GHNV-2133-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 923 AA; 104677 MW; E624476C201EEE9B CRC64; MQADSENTIS GEPLFKGMIT QATISGIPIP IIFVIAFLSG LAYFISGKLY AVLPAIPLLI GTRLLYETDR DFLTLNMLNF KTNSGLGKIV RFFGSKTFTA QKYNRTAFSE NRIETLGIKL SEQKDYSKFI PYSSHIAPNV VITRNGDLVA TWCCKGVTFE TAENYELNLS KEKLNTLIQS FSKKGVSFYQ HNIRHKVNET LDGHFSSEFT QEVNDKYYAG FNNGTLQRNI LYVTLVYTPY SKLEKISRKT TKLKDKKQEL AYQLETMQEM CSRLDKALED FRGEALTTFS KGGALYSEQL SFYNYLITNR WQPVRVTSTS FYHLLGNTDL HFGKETGQIT FNGESRFFRC LEIKDYTEET CEGFFDALMY INADYVITQS FQAMPSNVAK EKLDRQQKRL NSSNEAAISQ VDNLTVALDD LASGRLSFGY YHFGMMVYGD SIKDVTDKTN EIIAVLSSLG LIITLANTAL SASYFGQFPA NFAYRPRLAM LSSKNYASFT SLHNFAGGKR DGNPWGDAVT MLITTNNQPY YFNFHQSEFN VDDRGEKRLG NTMVLGQAGA GKTMLMTFLI NQLQKFNHTS TFLPTSVKRE LTTVYLDKDY GAEACIRAMG GKYMLIRKGV PSGFNPFICE NTPENLSFLS TLMKMLVTRN GKTLSSLDEE ELYKAIKSVM EFSPEYRSYP ISRVIEHLPE GSTKAEKENS LARRLKNWAQ GGEFGWVFDN AADTLDFTGY AVFGIDGTEF LDDPDTSAPL SFYLLHRITQ LLDGRRLGIF MDEYWKWIKH DAFTDFSENK AKTIRKEDGF IVPITQSPHE VLKSPIARAI IEQCETMICL PNPQAKKNEY VDGFNISEKQ FEIVRDLKPN SRTFLIRKGL ETTLAKLDLS GLGRENLKIL STSKDNAEIL HQILEEVGEA TNDWIPIYKQ RCV // ID G8NL62_BRUSS Unreviewed; 116 AA. AC G8NL62; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 22-JAN-2014, entry version 8. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=BSVBI22_B0067; OS Brucella suis VBI22. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=1112912; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=VBI22; RX PubMed=22275106; DOI=10.1128/JB.06556-11; RA Tae H., Shallom S., Settlage R., Hawkins G.N., Adams L.G., RA Garner H.R.; RT "Complete Genome Sequence of Brucella suis VBI22, Isolated from Bovine RT Milk."; RL J. Bacteriol. 194:910-910(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003129; AEU07229.1; -; Genomic_DNA. DR RefSeq; YP_005108091.1; NC_016775.1. DR ProteinModelPortal; G8NL62; -. DR EnsemblBacteria; AEU07229; AEU07229; BSVBI22_B0067. DR GeneID; 11686210; -. DR KEGG; bsv:BSVBI22_B0067; -. DR KO; K03198; -. DR BioCyc; BSUI1112912:GJTI-2296-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID G8SUL1_BRUCA Unreviewed; 82 AA. AC G8SUL1; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 22-JAN-2014, entry version 8. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BCA52141_II1140; OS Brucella canis HSK A52141. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=1104321; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=A52141; RA Kim J.-S., Jeong W., Kim H., Baek J.-H., Vinuselvi P., Lee S.K., RA Kim J.W., Kim J.-Y., Jung S.C., Her M., An D.-J.; RL Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=A52141; RX PubMed=22933762; DOI=10.1128/JB.01125-12; RA Kim J.S., Jeong W., Jeoung H.Y., Song J.Y., Kim H., Beak J.H., RA Parisutham V., Lee S.K., Kim J.W., Kim J.Y., Jung S.C., Her M., RA An D.J.; RT "Complete Genome Sequence of Brucella canis Strain HSK A52141, RT Isolated from the Blood of an Infected Dog."; RL J. Bacteriol. 194:5134-5134(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003175; AEW15888.1; -; Genomic_DNA. DR RefSeq; YP_005153281.1; NC_016796.1. DR EnsemblBacteria; AEW15888; AEW15888; BCA52141_II1140. DR GeneID; 11726877; -. DR KEGG; bsk:BCA52141_II1140; -. DR KO; K03198; -. DR BioCyc; BCAN1104321:GJV1-2903-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 82 AA; 9504 MW; 507BFE1637F15414 CRC64; MIPLVIVGGS IVLLSVWISM FILPLIVPIV LVMRQITQTD DQMFRLLGLK AQFRLIHFNR TGRFWRASAY SPIAFTKRKR ES // ID G8T3C1_BRUAO Unreviewed; 82 AA. AC G8T3C1; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 22-JAN-2014, entry version 8. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=BAA13334_II00314; OS Brucella abortus A13334. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=1104320; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=A13334; RX PubMed=22965076; DOI=10.1128/JB.01124-12; RA Kim H., Jeong W., Jeoung H.Y., Song J.Y., Kim J.S., Beak J.H., RA Parisutham V., Lee S.K., Kim J.W., Kim J.Y., Jung S.C., Her M., RA An D.J.; RT "Complete Genome Sequence of Brucella abortus A13334, a New Strain RT Isolated from the Fetal Gastric Fluid of Dairy Cattle."; RL J. Bacteriol. 194:5444-5444(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003177; AEW18754.1; -; Genomic_DNA. DR RefSeq; YP_005113658.1; NC_016777.1. DR EnsemblBacteria; AEW18754; AEW18754; BAA13334_II00314. DR GeneID; 11685060; -. DR KEGG; baa:BAA13334_II00314; -. DR KO; K03198; -. DR BioCyc; BABO1104320:GKD4-2435-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 82 AA; 9504 MW; 507BFE1637F15414 CRC64; MIPLVIVGGS IVLLSVWISM FILPLIVPIV LVMRQITQTD DQMFRLLGLK AQFRLIHFNR TGRFWRASAY SPIAFTKRKR ES // ID G8VYZ0_KLEPH Unreviewed; 912 AA. AC G8VYZ0; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 14-MAY-2014, entry version 13. DE SubName: Full=Putative type IV secretory pathway VirB4 component; GN OrderedLocusNames=KPHS_34780; OS Klebsiella pneumoniae subsp. pneumoniae (strain HS11286). OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Klebsiella. OX NCBI_TaxID=1125630; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=HS11286; RX PubMed=22408243; DOI=10.1128/JB.00043-12; RA Liu P., Li P., Jiang X., Bi D., Xie Y., Tai C., Deng Z., Rajakumar K., RA Ou H.Y.; RT "Complete Genome Sequence of Klebsiella pneumoniae subsp. pneumoniae RT HS11286, a Multidrug-Resistant Strain Isolated from Human Sputum."; RL J. Bacteriol. 194:1841-1842(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003200; AEW62176.1; -; Genomic_DNA. DR RefSeq; YP_005227778.1; NC_016845.1. DR EnsemblBacteria; AEW62176; AEW62176; KPHS_34780. DR GeneID; 11848507; -. DR KEGG; kpm:KPHS_34780; -. DR KO; K03199; -. DR OMA; FSEETAT; -. DR BioCyc; KPNE1125630:GJUV-3532-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 912 AA; 103159 MW; 96ABD66E54E7F5A4 CRC64; MAKLLKAMKR PAALWGVPMV PLLAVTGVTI IVAVWTSVAL LFLLPVEFLV MKSLTRNEPM RFNLIAVWLR VKGKPVANRL FGATTLMPVE HEAVDIKEFL DAMKLNHCAT IKKYIPYSSH IHQHVVRSPK SDLYCTWELM GTPFDCESDE SLQFGTNQLH GLIHSFEGMP VTFYIHNDRN TFTDNLHKDS GNPYADEVSR LYYASVGVFR RNRLFLTVCY RPFVSLEKAE RKRMKDSQKL KELDGALLEM LEIKSTLDTA LSRYGARPLG TFTEGSTVFS SQLAFYEYLL THQWRKVRVT RTPAYDVMGA AALFFSAESG QINHANGTQY FRGLEVKEFS EETATGMMDS LLYAPCDYVI TQSYTCMSRE EAKKAIKRTR RLLMSADDDA VSQRLDLDVA LDLLTSGKIA YGKHHFSIMV YSPSLENLVA DTNEISNALN NIGITPVPAE ISLSAAYMAQ LPGNYNLRPR KGELSSQNFV ELAALHNFYP GKRDKAPWGD AMALLRTPSG DGYYINLHNT LADKDEFNEK NPASTCILGT NGSGKTMLMT FFEIMQQKYG REDSFSPDAK TKRLTTVYLD KDRGAEMNIR ALGGRYYRVI SGESTGWNPF SLPATKRNIN FIKQLMKILC TRNGSTIFPR DERRLSDAVN AVMNDEPQYR VYGITRMLEN LPEPATKEAQ ENGLSIRLSQ WAQGGEFGWV FDNESDTFDI SNCDNFGIDG TEFLDDASVC APISFYLLYR ITSLLDGRRL VIFMDEFWKW LRDPVFKDFA YNKLKTIRKL NGMLVVGTQS PAEIIKDDIA PAVIEQCGTQ ILAANPNADR AHYVDDMKFE PEVFDVVKGL DPQARQYVVV KNQFKRGDTK RFAARVTLDL SGIGRYTKVM SGDAPNLEIF ESIYREGMQP HEWLDTYLAK AL // ID G8W8H3_KLEOK Unreviewed; 915 AA. AC G8W8H3; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 16-APR-2014, entry version 10. DE SubName: Full=Putative conjugal transfer protein; GN OrderedLocusNames=KOX_24565; OS Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC OS 3318 / NRRL B-199 / KCTC 1686). OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Klebsiella. OX NCBI_TaxID=1006551; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / RC KCTC 1686; RA Shin S.H., Kim S., Kim J.Y., Yang K.-S., Seo J.-S.; RT "Complete genome sequence of Klebsiella oxytoca strain KCTC 1686."; RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003218; AEX06628.1; -; Genomic_DNA. DR RefSeq; YP_005020867.1; NC_016612.1. DR EnsemblBacteria; AEX06628; AEX06628; KOX_24565. DR GeneID; 11661705; -. DR KEGG; kox:KOX_24565; -. DR KO; K03199; -. DR BioCyc; KOXY1006551:GH6O-4982-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 915 AA; 103654 MW; 61A4B12E784CE1A0 CRC64; MATLNKALTR PAAIAGIPLV PFVMVSGAIV LLAVYVSYYL VLLLIPAWLE MKVKARTDIH YFGLLWLAFK TRGRFGTNKH FGANALLANR YDAVDVSEFI EKMKLNERVT LEKYIPYSSH IHPHVIRNRQ GDLVASWELE GTVFECEDEH HLTLMATHLN NVIRAYEGLP VTFYLHRIRE KYHDAFDANS GIPFSDEVTR LYYQPIHGKP FWRHRLFFTV CYAPFSPLEK KAMKAQPSGK RKAALDDALK VMLEHREALV SALSRYTATP LGMYEDNGRV YSAQLSLYHR LLTGQWQKVA VTRAPFYETL STPDVFLTTD TAECQTVGGS RFFRSLEIKD YSPETATGLL DALLYAESEY VLTQSFTCMA RDEAQKHIRL TEKRLNSADD DAISQREELI VLRDLIQSGH VSCGKYHFSL LVSSDSPDQV VKDTNALAQP FADLGIMTAL STLSLPAAYL AQLPGIYTLR PRLVAISSQN FADLASLHNF HSHKRSDNPW GEAIAILKSP GGGGYYLNLH DGQCRRNDFN EKTPGNTAII GKTGSGKTML MTMMQQLMQK YRNPATFSAS TTIQRFTTVY FDKDRAAEMA IRQMGGRYFR IRTGTPTGFN PFSLAPTRRN ISFIKRLVRM LCGRNGKPLD PRDEERISAA VDTIMLDYPP EYRKFGITRL LEVLPEPPTP AARLNGLRIR LKQWAQGGEF GWVFDNEEDT FNISHVDNLG IDGTEFLDDD DIRGPITFYL LYRVTGLLDG RRLVMFMDEF WKWLADVEFS RFSLNMLKVI RKLNGIFVPA TQSPDEIVKH PIAPAIIEQC STQIFLANPK ASRADYVEKM KVPESVYDIV RNLDPGERYM VVLKTPLRAG ETRPFVAMAK MDLSGLGKLT KMLSGSEDNL KLFDTLYQEG MQPDDWKAAF LEQAL // ID G9ABZ9_RHIFH Unreviewed; 99 AA. AC G9ABZ9; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 22-JAN-2014, entry version 10. DE SubName: Full=K03198 type IV secretion system protein VirB3; GN OrderedLocusNames=SFHH103_04088; OS Rhizobium fredii (strain HH103) (Sinorhizobium fredii). OG Plasmid pSfHH103c. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. OX NCBI_TaxID=1117943; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=HH103; RX PubMed=22374952; DOI=10.1128/JB.06729-11; RA Weidner S., Becker A., Bonilla I., Jaenicke S., Lloret J., RA Margaret I., Puhler A., Ruiz-Sainz J.E., Schneiker-Bekel S., RA Szczepanowski R., Vinardell J.M., Zehner S., Gottfert M.; RT "Genome sequence of the soybean symbiont Sinorhizobium fredii HH103."; RL J. Bacteriol. 194:1617-1618(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HE616893; CCE98578.1; -; Genomic_DNA. DR RefSeq; YP_005191345.1; NC_016814.1. DR EnsemblBacteria; CCE98578; CCE98578; SFHH103_04088. DR GeneID; 11801063; -. DR KEGG; sfh:SFHH103_04088; -. DR KO; K03198; -. DR BioCyc; SFRE1117943:GJT5-6029-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 99 AA; 11020 MW; 50B825EA25D15BFB CRC64; MSEFQDEKPA LTPLVIGLTR SPTLWGVPYM AVVLIVGVTI IGWLATNDLL ALLIAPVAYL VLFSLCTWDN RILDVMQVTS RKTPRTPNKR FWGSNSYGP // ID G9ADB8_RHIFH Unreviewed; 113 AA. AC G9ADB8; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 19-FEB-2014, entry version 13. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=SFHH103_04694; OS Rhizobium fredii (strain HH103) (Sinorhizobium fredii). OG Plasmid pSfHH103d. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. OX NCBI_TaxID=1117943; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=HH103; RX PubMed=22374952; DOI=10.1128/JB.06729-11; RA Weidner S., Becker A., Bonilla I., Jaenicke S., Lloret J., RA Margaret I., Puhler A., Ruiz-Sainz J.E., Schneiker-Bekel S., RA Szczepanowski R., Vinardell J.M., Zehner S., Gottfert M.; RT "Genome sequence of the soybean symbiont Sinorhizobium fredii HH103."; RL J. Bacteriol. 194:1617-1618(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HE616896; CCE99167.1; -; Genomic_DNA. DR RefSeq; YP_006575708.1; NT_187148.1. DR EnsemblBacteria; CCE99167; CCE99167; SFHH103_04694. DR GeneID; 13434953; -. DR KEGG; sfh:SFHH103_04694; -. DR KO; K03198; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 113 AA; 12498 MW; 94DD01BA2A1735AD CRC64; MANARPALEE DTLFIACTRP AMIAGVTMEA MGMNVMLTTI LYIVAGSIAY ALVGVVFHLV FRALVKHDHN MFRILLAWVE TRGRSRNSAY WGGATLAPLK LARKYDERDL GLA // ID G9AE28_RHIFH Unreviewed; 99 AA. AC G9AE28; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 19-FEB-2014, entry version 13. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=SFHH103_04843; OS Rhizobium fredii (strain HH103) (Sinorhizobium fredii). OG Plasmid pSfHH103d. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. OX NCBI_TaxID=1117943; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=HH103; RX PubMed=22374952; DOI=10.1128/JB.06729-11; RA Weidner S., Becker A., Bonilla I., Jaenicke S., Lloret J., RA Margaret I., Puhler A., Ruiz-Sainz J.E., Schneiker-Bekel S., RA Szczepanowski R., Vinardell J.M., Zehner S., Gottfert M.; RT "Genome sequence of the soybean symbiont Sinorhizobium fredii HH103."; RL J. Bacteriol. 194:1617-1618(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HE616897; CCE99310.1; -; Genomic_DNA. DR RefSeq; YP_006575849.1; NT_187149.1. DR EnsemblBacteria; CCE99310; CCE99310; SFHH103_04843. DR GeneID; 13435100; -. DR KEGG; sfh:SFHH103_04843; -. DR KO; K03198; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 99 AA; 11470 MW; D7429E9BB5D536D3 CRC64; MAEALSERYR NRIHRALSRP NLLMGADREL VLITGLAAVI LIFVVLTVYS ALFGVVVWIV IVGLLRMMAK SDPLMRQVYV RHISYKPYYK ATTSPWRRY // ID G9AI60_RHIFH Unreviewed; 113 AA. AC G9AI60; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 22-JAN-2014, entry version 11. DE SubName: Full=Type IV secretion system protein virB3; GN OrderedLocusNames=SFHH103_06283; OS Rhizobium fredii (strain HH103) (Sinorhizobium fredii). OG Plasmid pSfHH103e. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. OX NCBI_TaxID=1117943; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=HH103; RX PubMed=22374952; DOI=10.1128/JB.06729-11; RA Weidner S., Becker A., Bonilla I., Jaenicke S., Lloret J., RA Margaret I., Puhler A., Ruiz-Sainz J.E., Schneiker-Bekel S., RA Szczepanowski R., Vinardell J.M., Zehner S., Gottfert M.; RT "Genome sequence of the soybean symbiont Sinorhizobium fredii HH103."; RL J. Bacteriol. 194:1617-1618(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HE616899; CCF00742.1; -; Genomic_DNA. DR RefSeq; YP_005192881.1; NC_016815.1. DR EnsemblBacteria; CCF00742; CCF00742; SFHH103_06283. DR GeneID; 11800470; -. DR KEGG; sfh:SFHH103_06283; -. DR BioCyc; SFRE1117943:GJT5-5437-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 113 AA; 12688 MW; C7FDC48842FA923A CRC64; MATTRPTLEE DTLFIACTRP AMIAGVTMEA MGMNIMLTTI FYIVAGSIAY LAVGVVFHLV FRALVKHDHN MFRILLVWVE TCGRSRNSAY WGGATLAPLR LTRRYDERDL GFA // ID G9C9C2_COMTE Unreviewed; 103 AA. AC G9C9C2; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 11-DEC-2013, entry version 7. DE SubName: Full=TrbD; GN Name=trbD; OS Comamonas testosteroni (Pseudomonas testosteroni). OG Plasmid pTB30. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Comamonas. OX NCBI_TaxID=285; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=TB30; PLASMID=pTB30; RA Dejonghe W., Goris J., Dierickx A., De Dobbeleer V., Crul K., RA De Vos P., Verstraete W., Top E.M.; RT "Diversity of 3-chloroaniline and 3,4-dichloroaniline degrading RT bacteria isolated from three different soils and involvement of their RT plasmids in chloroaniline degradation."; RL FEMS Microbiol. Ecol. 42:315-325(2002). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=TB30; PLASMID=pTB30; RX PubMed=22101050; DOI=10.1128/AEM.07480-11; RA Krol J.E., Penrod J.T., McCaslin H., Rogers L.M., Yano H., RA Stancik A.D., Dejonghe W., Brown C.J., Parales R.E., Wuertz S., RA Top E.M.; RT "Role of IncP-1? Plasmids pWDL7::rfp and pNB8c in Chloroaniline RT Catabolism as Determined by Genomic and Functional Analyses."; RL Appl. Environ. Microbiol. 78:828-838(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JF274987; AEX00387.1; -; Genomic_DNA. DR RefSeq; YP_005351535.1; NC_016968.1. DR GeneID; 11934155; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11860 MW; D54CECAB78AD75E2 CRC64; MALRAIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QEVRATVFGI ALWFGALFVL RLMAKSDPKL RHVYLRHRRY KPYYPARSTP FRENTPSQGK QYK // ID G9C9J8_DELAC Unreviewed; 85 AA. AC G9C9J8; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 11-DEC-2013, entry version 9. DE SubName: Full=TrbD; GN Name=trbD; OS Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans). OG Plasmid pC1-1, and Plasmid pLME1. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Delftia. OX NCBI_TaxID=80866; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=LME1; PLASMID=pLME1; RX PubMed=11229899; DOI=10.1128/AEM.67.3.1107-1115.2001; RA Boon N., Goris J., De Vos P., Verstraete W., Top E.M.; RT "Genetic diversity among 3-chloroaniline- and aniline-degrading RT strains of the Comamonadaceae."; RL Appl. Environ. Microbiol. 67:1107-1115(2001). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=CA28; PLASMID=pC1-1; RA Krol J.E., Rogers L.M., Sen D., Top E.M.; RT "Family of IncP-1 plasmids involved in chloroaniline degradation."; RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases. RN [3] RP NUCLEOTIDE SEQUENCE. RC STRAIN=LME1; PLASMID=pLME1; RX PubMed=22101050; DOI=10.1128/AEM.07480-11; RA Krol J.E., Penrod J.T., McCaslin H., Rogers L.M., Yano H., RA Stancik A.D., Dejonghe W., Brown C.J., Parales R.E., Wuertz S., RA Top E.M.; RT "Role of IncP-1? Plasmids pWDL7::rfp and pNB8c in Chloroaniline RT Catabolism as Determined by Genomic and Functional Analyses."; RL Appl. Environ. Microbiol. 78:828-838(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HQ891317; AEA41889.1; -; Genomic_DNA. DR EMBL; JF274988; AEX00463.1; -; Genomic_DNA. DR RefSeq; YP_006961380.1; NC_019263.1. DR RefSeq; YP_006961845.1; NC_019283.1. DR GeneID; 13918100; -. DR GeneID; 13918348; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 85 AA; 9779 MW; E2593659C82C3675 CRC64; MGGDRELVMF SGLLAGALIF SAQEVRATVF GIALWFGALF VLRLMAKSDP KLRHVYLRHR RYKPYYPARS TPFRENTPSQ GKQYK // ID G9C9T2_COMTE Unreviewed; 85 AA. AC G9C9T2; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 11-DEC-2013, entry version 8. DE SubName: Full=TrbD; GN Name=trbD; OS Comamonas testosteroni (Pseudomonas testosteroni). OG Plasmid pI2. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Comamonas. OX NCBI_TaxID=285; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=I2; PLASMID=pI2; RX PubMed=11229899; DOI=10.1128/AEM.67.3.1107-1115.2001; RA Boon N., Goris J., De Vos P., Verstraete W., Top E.M.; RT "Genetic diversity among 3-chloroaniline- and aniline-degrading RT strains of the Comamonadaceae."; RL Appl. Environ. Microbiol. 67:1107-1115(2001). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=I2; PLASMID=pI2; RX PubMed=22101050; DOI=10.1128/AEM.07480-11; RA Krol J.E., Penrod J.T., McCaslin H., Rogers L.M., Yano H., RA Stancik A.D., Dejonghe W., Brown C.J., Parales R.E., Wuertz S., RA Top E.M.; RT "Role of IncP-1? Plasmids pWDL7::rfp and pNB8c in Chloroaniline RT Catabolism as Determined by Genomic and Functional Analyses."; RL Appl. Environ. Microbiol. 78:828-838(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JF274989; AEX00547.1; -; Genomic_DNA. DR RefSeq; YP_005352080.1; NC_016978.1. DR GeneID; 11934446; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 85 AA; 9779 MW; E2593659C82C3675 CRC64; MGGDRELVMF SGLLAGALIF SAQEVRATVF GIALWFGALF VLRLMAKSDP KLRHVYLRHR RYKPYYPARS TPFRENTPSQ GKQYK // ID G9CA17_DELAC Unreviewed; 103 AA. AC G9CA17; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 11-DEC-2013, entry version 7. DE SubName: Full=TrbD; GN Name=trbD; OS Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans). OG Plasmid pNB8c. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Delftia. OX NCBI_TaxID=80866; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=B8c; PLASMID=pNB8c; RX PubMed=11229899; DOI=10.1128/AEM.67.3.1107-1115.2001; RA Boon N., Goris J., De Vos P., Verstraete W., Top E.M.; RT "Genetic diversity among 3-chloroaniline- and aniline-degrading RT strains of the Comamonadaceae."; RL Appl. Environ. Microbiol. 67:1107-1115(2001). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=B8c; PLASMID=pNB8c; RX PubMed=22101050; DOI=10.1128/AEM.07480-11; RA Krol J.E., Penrod J.T., McCaslin H., Rogers L.M., Yano H., RA Stancik A.D., Dejonghe W., Brown C.J., Parales R.E., Wuertz S., RA Top E.M.; RT "Role of IncP-1? Plasmids pWDL7::rfp and pNB8c in Chloroaniline RT Catabolism as Determined by Genomic and Functional Analyses."; RL Appl. Environ. Microbiol. 78:828-838(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JF274990; AEX00632.1; -; Genomic_DNA. DR RefSeq; YP_006961464.1; NC_019264.1. DR GeneID; 13918170; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11860 MW; D54CECAB78AD75E2 CRC64; MALRAIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QEVRATVFGI ALWFGALFVL RLMAKSDPKL RHVYLRHRRY KPYYPARSTP FRENTPSQGK QYK // ID G9EPD7_9GAMM Unreviewed; 81 AA. AC G9EPD7; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Putative uncharacterized protein; GN ORFNames=LDG_7121; OS Legionella drancourtii LLAP12. OC Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; OC Legionellaceae; Legionella. OX NCBI_TaxID=658187; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=LLAP12; RX PubMed=22047552; DOI=10.1186/1471-2164-12-542; RA Gimenez G., Bertelli C., Moliner C., Robert C., Raoult D., RA Fournier P.E., Greub G.; RT "Insight into cross-talk between intra-amoebal pathogens."; RL BMC Genomics 12:542-542(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JH413822; EHL30972.1; -; Genomic_DNA. DR EnsemblBacteria; EHL30972; EHL30972; LDG_7121. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 81 AA; 9355 MW; C48C6BAD7B49F775 CRC64; MGGDRELVMF SGLLSAILIF AAQDWLAAFV GVLMWFSALK GLRLMAKSDP SMRAIYLRQR RYQAYYPARS TPFRTNRRGY Q // ID G9FB48_9BACT Unreviewed; 103 AA. AC G9FB48; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 19-FEB-2014, entry version 10. DE SubName: Full=Mating pair formation protein; DE SubName: Full=TrbD; GN Name=trbD; ORFNames=pEMT30006; OS uncultured bacterium. OG Plasmid pAKD16, Plasmid pAKD25, Plasmid pAKD34, and Plasmid pEMT3. OC Bacteria; environmental samples. OX NCBI_TaxID=77133; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pAKD16, pAKD25, and pAKD34; RX PubMed=21948829; DOI=10.1128/AEM.05439-11; RA Sen D., Van der Auwera G.A., Rogers L.M., Thomas C.M., Brown C.J., RA Top E.M.; RT "Broad-host-range plasmids from agricultural soils have IncP-1 RT backbones with diverse accessory genes."; RL Appl. Environ. Microbiol. 77:7975-7983(2011). RN [2] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pEMT3; RX PubMed=22936717; DOI=10.1093/molbev/mss210; RA Sen D., Brown C.J., Top E.M., Sullivan J.; RT "Inferring the evolutionary history of IncP-1 plasmids despite RT incongruence among backbone gene trees."; RL Mol. Biol. Evol. 30:154-166(2013). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JN106167; AEV56833.1; -; Genomic_DNA. DR EMBL; JN106170; AEV57039.1; -; Genomic_DNA. DR EMBL; JN106175; AEV57384.1; -; Genomic_DNA. DR EMBL; JX469827; AFR43843.1; -; Genomic_DNA. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11826 MW; E4133DE24ECD785C CRC64; MALRAIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QEVRATVFGI VLWFGALWAC RLMAKSDPKL RKVYLRHRRY KGYYPARSTP FRDNTPSQGK QYK // ID G9FBS3_9BACT Unreviewed; 85 AA. AC G9FBS3; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 13-NOV-2013, entry version 3. DE SubName: Full=TrbD; GN Name=trbD; OS uncultured bacterium. OG Plasmid pAKD31. OC Bacteria; environmental samples. OX NCBI_TaxID=77133; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pAKD31; RX PubMed=21948829; DOI=10.1128/AEM.05439-11; RA Sen D., Van der Auwera G.A., Rogers L.M., Thomas C.M., Brown C.J., RA Top E.M.; RT "Broad-host-range plasmids from agricultural soils have IncP-1 RT backbones with diverse accessory genes."; RL Appl. Environ. Microbiol. 77:7975-7983(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JN106173; AEV57264.1; -; Genomic_DNA. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 85 AA; 9721 MW; B859371CDB975BD0 CRC64; MGGDRELVMF SGLLAGALIF SAQEVRATVF GIALWFGALF ALRLMAKADP KLRHVYLRHR RYKPYYPARS TPFRDNTPSQ GKQYK // ID G9G733_KLEPN Unreviewed; 917 AA. AC G9G733; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 16-APR-2014, entry version 14. DE SubName: Full=PilX3-PilX4; DE SubName: Full=Type IV secretion/conjugal transfer ATPase; DE SubName: Full=VirB3-4; GN Name=pilx3-4; Synonyms=virB3-4; ORFNames=IPF_310, pCRE79_30; OS Klebsiella pneumoniae. OG Plasmid pIncX-SHV, Plasmid pKPC-NY79, and Plasmid pKpS90. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Klebsiella. OX NCBI_TaxID=573; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pIncX-SHV; RX PubMed=22252815; DOI=10.1128/AAC.05308-11; RA Garcia-Fernandez A., Villa L., Carta C., Venditti C., Giordano A., RA Venditti M., Mancini C., Carattoli A.; RT "Klebsiella pneumoniae ST258 Producing KPC-3 Identified in Italy RT Carries Novel Plasmids and OmpK36/OmpK35 Porin Variants."; RL Antimicrob. Agents Chemother. 56:2143-2145(2012). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=KpS90; PLASMID=pKpS90; RX PubMed=23089759; DOI=10.1128/AAC.01712-12; RA Kassis-Chikhani N., Frangeul L., Drieux L., Sengelin C., Jarlier V., RA Brisse S., Arlet G., Decre D.; RT "Complete Nucleotide Sequence of the First KPC-2- and SHV-12-Encoding RT IncX Plasmid, pKpS90, from Klebsiella pneumoniae."; RL Antimicrob. Agents Chemother. 57:618-620(2013). RN [3] RP NUCLEOTIDE SEQUENCE. RC STRAIN=CRE79; PLASMID=pKPC-NY79; RX PubMed=23728748; DOI=10.1007/s00284-013-0398-2; RA Ho P.L., Cheung Y.Y., Lo W.U., Li Z., Chow K.H., Lin C.H., Chan J.F., RA Cheng V.C.; RT "Molecular Characterization of an Atypical IncX3 Plasmid pKPC-NY79 RT Carrying bla KPC-2 in a Klebsiella pneumoniae."; RL Curr. Microbiol. 67:493-498(2013). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JN247852; AEW43333.1; -; Genomic_DNA. DR EMBL; JX104759; AFR11546.1; -; Genomic_DNA. DR EMBL; JX461340; AFV66835.1; -; Genomic_DNA. DR RefSeq; YP_006958991.1; NC_019157.1. DR RefSeq; YP_006959228.1; NC_019161.1. DR RefSeq; YP_006971158.1; NC_019384.1. DR GeneID; 13914030; -. DR GeneID; 13914619; -. DR GeneID; 13923847; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 917 AA; 104823 MW; 0DFE56B735ABBE28 CRC64; MSTVFKGLTR PALIRGLGVP LYPFLGMCVI CVLLGVWIHE AMYALILPGW YAIKRVTKID ERFFDLLYLR MQIKGNPLAN KRFNAVHYAG SSYDAVDISK VDNFMKLKDQ SSLEELIPYS SHITDNLIVT RNHDLLATWQ IDGAYFECVD EADLALLTDQ LNTLIRSFDG KPVTFYTHRI RVRKEVRPVF DSKIPFVNRV MNDYYESLSA AEYFENKLYL TVCYKPFSAE DKVTHFLSRK KGNKNIFEEP INDMNEICGR LSTYLSRFHS RRLGLYEENN IVYSEQLTLF QKLLSGRWQK VRVTNSPFYT YLGGKDLFFG NDAGQITASD HARYFRCIEI KDYFQETDAG IFDALMYLPV EYVQTSSFTP IDKQSAIKAL DDQIDKLEMT DDAAKSLLAD LKVGLDMVSS GYISFGKSHQ TLIVYADSPE RLVKDTNIVT TTLEDLGLIV TYSTLSLGAA YFAQLPGNYT LRPRLSSISS LNFAEMESFH NFFTGKEKGN TWGNNLITLG GSGNDIYNLN YHMTTEHQNY FGKNPTLGHT EILGTSNVGK TVVMMTKAFA AQQFGTPESF PPERKLKKLT TVFFDKDRAA EPGIRSMGGA YFRVKEGEPT GWNPAALPPT KRNISFMKDL VRLLCTLNSE PLDDYQNRLI SDAVERLMQR SNRSYPISKL RPLILEPDDT ETRRHGLKAR LNAWVQGGEF GWVFDNPDDT FDVDNLDVFG IDGTEFLDNK VLSSAASFYL IYRVTMLADG RRLLIYMDEF WQWINNEAFR DFVYNKLKTA RKLDMVLVVA TQSPDELIKS PIAAAVREQC ATHIYLANPK AKRSEYVDEL EVRELYFDKI KAIDPLSRQF LVVKNPQRKG ESDDFAAFAR LDLGKAAYYL PVLSASKPQL ELFDEIWKEG MKPEEWLDTY LERANLI // ID G9G7N1_9PSED Unreviewed; 97 AA. AC G9G7N1; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 13-NOV-2013, entry version 3. DE SubName: Full=Putative mating pair formation protein MpfB; GN Name=mpfB; ORFNames=pYIC1_81; OS Pseudomonas sp. MC1. OG Plasmid KOPRI126573. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. OX NCBI_TaxID=1123041; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MC1; PLASMID=KOPRI126573; RA Ahn E., Kim D., Kim E.; RT "Complete nucleotide sequence and genetic organization of a catabolic RT plasmid from a psychrotolerant Pseudomonas species."; RL Submitted (JUL-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JN248563; AEV45922.1; -; Genomic_DNA. DR RefSeq; YP_005083720.1; NC_016644.1. DR GeneID; 11593799; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 97 AA; 10725 MW; A127D949339B63FF CRC64; MAEQDPDEGE VLVVAMARPS MVGPFTLSSI LISLITPVLA ALLLRSLYVL ASMPILFAAA YWICSKDVYL FGVIKAAFKL TASRLRKLWG YRSYAPR // ID G9RMI1_9ENTR Unreviewed; 912 AA. AC G9RMI1; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 16-APR-2014, entry version 6. DE SubName: Full=VirB4 family type IV secretion/conjugal transfer ATPase; GN ORFNames=HMPREF1024_05170; OS Klebsiella sp. 4_1_44FAA. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Klebsiella. OX NCBI_TaxID=665944; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=4_1_44FAA; RG The Broad Institute Genome Sequencing Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Daigneault M., Strauss J., RA Allen-Vercoe E., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., RA Haas B., Abouelleil A., Alvarado L., Arachchi H.M., Berlin A., RA Brown A., Chapman S.B., Chen Z., Dunbar C., Freedman E., Gearin G., RA Goldberg J., Griggs A., Gujja S., Heiman D., Howarth C., Larson L., RA Lui A., MacDonald P.J.P., Montmayeur A., Murphy C., Neiman D., RA Pearson M., Priest M., Roberts A., Saif S., Shea T., Shenoy N., RA Sisk P., Stolte C., Sykes S., Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Klebsiella sp. 4_1_44FAA."; RL Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ACWO01000125; EHL84629.1; -; Genomic_DNA. DR EnsemblBacteria; EHL84629; EHL84629; HMPREF1024_05170. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 912 AA; 103094 MW; 6742C839B7308DE4 CRC64; MAKLLKAMKR PAALWGVPMV PLLAVTGVTI IVAIWTSVAL LFLLPVQFLV MKSLTRNEPM RFNLIAVWLR AKGKPVANRL FGATTFMPVE HDDVDIKEFL DAMKLNQCAT IKKYIPYSSH IHQHVVRSPK SDLYCTWELM GTPFDCESDE SLQFGTNQLH GLIRSFEGMP VTFYIHNDRN TFTDNLHKDS GNPYADEVSR LYYASVGLFR RNRLFLTVCY RPFVSLEKAE RKRMKDSQKL KELDGALLEM LEIKSTLDTA LSRYGARPLG TFTEGNAVFS SQLAFYEYLL THQWRKVRVT RTPAYDVMGA AALFFSAESG QINHANGTQY FRGLEVKEFS EETATGMMDS LLYAPCDYVI TQSYTCMSRE EAKKAIKRTR RLLMSADDDA VSQRLDLDVA LDLLTSGKIA YGKHHFSIMV YSPSLESLVA DTNEISNALN NIGITPVPAE ISLSAAYMAQ LPGNYNLRPR KGELSSQNFV ELAALHNFYP GKRDKAPWGD AMALLRTPSG DGYYINLHNT LADKDEFNEK NPASTCILGT NGSGKTMLMT FFEIMQQKYG REDSFSPDAK TKRLTTVYLD KDRGAEMNIR ALGGRYYRVI SGEPTGWNPF SLPATKRNIN FIKQLMKILC TRNGSTISPR DERRLSDAVN AVMNDEPQYR VYGITRMLEN LPEPATKEAQ ENGLSIRLSQ WAQGGEFGWV FDNESDTFDI SNCDNFGIDG TEFLDDASVC APISFYLLYR ITSLLDGRRL VIFMDEFWKW LRDPVFKDFA YNKLKTIRKL NGMLVVGTQS PAEIIKDDIA PAVIEQCGTQ ILAANPNADR AHYVDGMKFE PEVFDVVKGL DPQARQYVVV KNQFKRGDTK RFAARVTLDL SGIGRYTKVM SGDAPNLEIF ESIYREGMQP HEWLDTYLAK AL // ID G9SDQ8_CITFR Unreviewed; 104 AA. AC G9SDQ8; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 19-MAR-2014, entry version 5. DE SubName: Full=Uncharacterized protein; GN ORFNames=HMPREF9428_02558; OS Citrobacter freundii 4_7_47CFAA. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Citrobacter; Citrobacter freundii complex. OX NCBI_TaxID=742730; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=4_7_47CFAA; RG The Broad Institute Genome Sequencing Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Daigneault M., Strauss J., RA Allen-Vercoe E., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., RA Haas B., Abouelleil A., Alvarado L., Arachchi H.M., Berlin A., RA Brown A., Chapman S.B., Chen Z., Dunbar C., Freedman E., Gearin G., RA Goldberg J., Griggs A., Gujja S., Heiman D., Howarth C., Larson L., RA Lui A., MacDonald P.J.P., Montmayeur A., Murphy C., Neiman D., RA Pearson M., Priest M., Roberts A., Saif S., Shea T., Shenoy N., RA Sisk P., Stolte C., Sykes S., Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Citrobacter freundii 4_7_47CFAA."; RL Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADLG01000011; EHL84365.1; -; Genomic_DNA. DR EnsemblBacteria; EHL84365; EHL84365; HMPREF9428_02558. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 104 AA; 11983 MW; 3CC4BC964078AB37 CRC64; MQAEEARRLT PFHRALHRPQ QVWGGERELM LFSMLVAGGL IVSAMNWPAT ILGTCIWLVC VYGLRKMAKA DPNMSKVYVR QLKYGNYYGP FSRPHRVAKS PRIY // ID G9ZDC4_9GAMM Unreviewed; 111 AA. AC G9ZDC4; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 13-NOV-2013, entry version 5. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=HMPREF9080_00758; OS Cardiobacterium valvarum F0432. OC Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; OC Cardiobacteriaceae; Cardiobacterium. OX NCBI_TaxID=797473; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=F0432; RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., RA Courtney L., Fronick C., Harrison M., Strong C., Farmer C., RA Delahaunty K., Markovic C., Hall O., Minx P., Tomlinson C., RA Mitreva M., Hou S., Chen J., Wollam A., Pepin K.H., Johnson M., RA Bhonagiri V., Zhang X., Suruliraj S., Warren W., Chinwalla A., RA Mardis E.R., Wilson R.K.; RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGCM01000039; EHM55402.1; -; Genomic_DNA. DR EnsemblBacteria; EHM55402; EHM55402; HMPREF9080_00758. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 111 AA; 12706 MW; 47C5DE95E5C0EB67 CRC64; MTDTDIERTT APLSRGATRP PMLLGVPLMA FVVATVPIVS ASMFLSLFFD RLAYILLLIP IPALIVMREL TKRDDQYLRM AGLQRREQLW LLPNKVENAY FLPPKPIRHK D // ID H0BVL2_9BURK Unreviewed; 113 AA. AC H0BVL2; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN ORFNames=KYG_07091; OS Acidovorax sp. NO-1. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Acidovorax. OX NCBI_TaxID=512030; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NO-1; RX PubMed=22374962; DOI=10.1128/JB.06814-11; RA Huang Y., Li H., Rensing C., Zhao K., Johnstone L., Wang G.; RT "Genome Sequence of the Facultative Anaerobic Arsenite-Oxidizing and RT Nitrate-Reducing Bacterium Acidovorax sp. Strain NO1."; RL J. Bacteriol. 194:1635-1636(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGTS01000063; EHL23544.1; -; Genomic_DNA. DR EnsemblBacteria; EHL23544; EHL23544; KYG_07091. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 113 AA; 13124 MW; EDD816F0884A689C CRC64; MQTMQAEAIY KGATRPAMKL GIPLVPLVIL FGTGMLLIMW GGILVSWWLA LGVVLSIAPV LLWMRWLTAR DDQRFRQIFV VLKLKLHDRN RRFWRARSYS PTLYRGGSDV WHV // ID H0C096_9BURK Unreviewed; 90 AA. AC H0C096; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=KYG_15435; OS Acidovorax sp. NO-1. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Acidovorax. OX NCBI_TaxID=512030; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NO-1; RX PubMed=22374962; DOI=10.1128/JB.06814-11; RA Huang Y., Li H., Rensing C., Zhao K., Johnstone L., Wang G.; RT "Genome Sequence of the Facultative Anaerobic Arsenite-Oxidizing and RT Nitrate-Reducing Bacterium Acidovorax sp. Strain NO1."; RL J. Bacteriol. 194:1635-1636(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGTS01000090; EHL22012.1; -; Genomic_DNA. DR EnsemblBacteria; EHL22012; EHL22012; KYG_15435. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 90 AA; 9527 MW; B4AD483702FD9DF3 CRC64; MTAPDTFAAG FEVPLHRSLT EPILLGGAPR TVAITNGTLA AAVGLGLQLW VPGLVLWIAG HALAVWGAKA DPQFMPVFAR HIKHRPLLDV // ID H0FVD3_RHIML Unreviewed; 113 AA. AC H0FVD3; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN ORFNames=SM0020_06032; OS Sinorhizobium meliloti CCNWSX0020. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. OX NCBI_TaxID=1107881; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=CCNWSX0020; RX PubMed=22328762; DOI=10.1128/JB.06682-11; RA Li Z., Ma Z., Hao X., Wei G.; RT "Draft Genome Sequence of Sinorhizobium meliloti CCNWSX0020, a RT Nitrogen-Fixing Symbiont with Copper Tolerance Capability Isolated RT from Lead-Zinc Mine Tailings."; RL J. Bacteriol. 194:1267-1268(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGVV01000007; EHK78981.1; -; Genomic_DNA. DR EnsemblBacteria; EHK78981; EHK78981; SM0020_06032. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 113 AA; 12494 MW; 57D6F08C8B38745B CRC64; MADSGPALEE DTLFIACTRP AMIAGVTMEA MGMNIMLTTI LYIVAGSVAY ALVGVVFHLV FRALIKHDHN MFRILLAWIE TRGRSRNSAY WGGATLSPLK LARKYDERDL GFA // ID H0GAT7_RHIML Unreviewed; 108 AA. AC H0GAT7; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=SM0020_33248; OS Sinorhizobium meliloti CCNWSX0020. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. OX NCBI_TaxID=1107881; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=CCNWSX0020; RX PubMed=22328762; DOI=10.1128/JB.06682-11; RA Li Z., Ma Z., Hao X., Wei G.; RT "Draft Genome Sequence of Sinorhizobium meliloti CCNWSX0020, a RT Nitrogen-Fixing Symbiont with Copper Tolerance Capability Isolated RT from Lead-Zinc Mine Tailings."; RL J. Bacteriol. 194:1267-1268(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGVV01000131; EHK73577.1; -; Genomic_DNA. DR EnsemblBacteria; EHK73577; EHK73577; SM0020_33248. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 108 AA; 11739 MW; 72E1BEAE4B77864C CRC64; MSDRLEESTL YVAATRPALF LGVPLNLAAL LMMLAGLIIV VVQNPLYEII LVPLWFGSRV VVERDYNAAS VALLYLQTAG RSVDAPFWGG ASVSPNPIKV PRRGRGML // ID H0HEF2_RHIRD Unreviewed; 113 AA. AC H0HEF2; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 03-APR-2013, entry version 5. DE SubName: Full=Type IV secretion protein AvhB3; GN ORFNames=AT5A_20261; OS Agrobacterium tumefaciens 5A. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=1107544; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=5A; RX PubMed=22275101; DOI=10.1128/JB.06585-11; RA Hao X., Lin Y., Johnstone L., Liu G., Wang G., Wei G., McDermott T., RA Rensing C.; RT "Genome sequence of the arsenite-oxidizing strain Agrobacterium RT tumefaciens 5A."; RL J. Bacteriol. 194:903-903(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGVZ01000008; EHJ96557.1; -; Genomic_DNA. DR EnsemblBacteria; EHJ96557; EHJ96557; AT5A_20261. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 113 AA; 12579 MW; 2E572501CAB5ACAE CRC64; MVGGQTVLEE DTLFIACTRP AMIAGVTMEA MGFNIMLTTI LYIVAGSIAY AFVGIVFHLI FKALVKHDHN MFRILLAWVE TRGRSRNGAY WGGATLSPLR LTRRFDERDI GIA // ID H0HH05_RHIRD Unreviewed; 99 AA. AC H0HH05; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 03-APR-2013, entry version 5. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=AT5A_24800; OS Agrobacterium tumefaciens 5A. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=1107544; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=5A; RX PubMed=22275101; DOI=10.1128/JB.06585-11; RA Hao X., Lin Y., Johnstone L., Liu G., Wang G., Wei G., McDermott T., RA Rensing C.; RT "Genome sequence of the arsenite-oxidizing strain Agrobacterium RT tumefaciens 5A."; RL J. Bacteriol. 194:903-903(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGVZ01000012; EHJ95601.1; -; Genomic_DNA. DR EnsemblBacteria; EHJ95601; EHJ95601; AT5A_24800. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 99 AA; 11137 MW; C8F96837E0E8AE9D CRC64; MAEAGSSLAR SRVHRALSRP NLLMGADREL VLLTALAAII LIFVVLTWYA ALFGIAIWLV AVAALRMMAK SDPLMRRVYL RHISYKTSYR ATSSPWRTF // ID H0HXL9_9RHIZ Unreviewed; 90 AA. AC H0HXL9; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 19-FEB-2014, entry version 7. DE SubName: Full=Putative conjugal transfer TrbD transmembrane protein; GN ORFNames=MAXJ12_24722; OS Mesorhizobium alhagi CCNWXJ12-2. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Phyllobacteriaceae; Mesorhizobium. OX NCBI_TaxID=1107882; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=CCNWXJ12-2; RX PubMed=22328758; DOI=10.1128/JB.06635-11; RA Zhou M., Chen W., Chen H., Wei G.; RT "Draft Genome Sequence of Mesorhizobium alhagi CCNWXJ12-2T, a Novel RT Salt-Resistant Species Isolated from the Desert of Northwestern RT China."; RL J. Bacteriol. 194:1261-1262(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AHAM01000207; EHK54542.1; -; Genomic_DNA. DR EnsemblBacteria; EHK54542; EHK54542; MAXJ12_24722. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Membrane; Transmembrane. SQ SEQUENCE 90 AA; 9488 MW; C54AFEAC677B8FAA CRC64; MAAGEQHIEG FEVPVHLALT EPILLGGAPR AVAILNGTVA AAIGLGMQQW IAGLVLWIAG HTLAVFAARR DPDFASALVR HLRLKGWLAC // ID H0HY33_9RHIZ Unreviewed; 93 AA. AC H0HY33; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Conjugal transfer protein TrbB; GN ORFNames=MAXJ12_25558; OS Mesorhizobium alhagi CCNWXJ12-2. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Phyllobacteriaceae; Mesorhizobium. OX NCBI_TaxID=1107882; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=CCNWXJ12-2; RX PubMed=22328758; DOI=10.1128/JB.06635-11; RA Zhou M., Chen W., Chen H., Wei G.; RT "Draft Genome Sequence of Mesorhizobium alhagi CCNWXJ12-2T, a Novel RT Salt-Resistant Species Isolated from the Desert of Northwestern RT China."; RL J. Bacteriol. 194:1261-1262(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AHAM01000215; EHK54315.1; -; Genomic_DNA. DR EnsemblBacteria; EHK54315; EHK54315; MAXJ12_25558. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 93 AA; 9844 MW; EA573BC257AD35D9 CRC64; MATSAEAIVE VPGFSVPVHR ALTEHILLGG APRSIAILNG TLAAALGLGL RLWLVGLGLW AIGHFAAVWA AKRDPQFVDV VRRHLRIPGH IGV // ID H0I164_9RHIZ Unreviewed; 99 AA. AC H0I164; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN ORFNames=MAXJ12_31007; OS Mesorhizobium alhagi CCNWXJ12-2. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Phyllobacteriaceae; Mesorhizobium. OX NCBI_TaxID=1107882; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=CCNWXJ12-2; RX PubMed=22328758; DOI=10.1128/JB.06635-11; RA Zhou M., Chen W., Chen H., Wei G.; RT "Draft Genome Sequence of Mesorhizobium alhagi CCNWXJ12-2T, a Novel RT Salt-Resistant Species Isolated from the Desert of Northwestern RT China."; RL J. Bacteriol. 194:1261-1262(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AHAM01000278; EHK53226.1; -; Genomic_DNA. DR EnsemblBacteria; EHK53226; EHK53226; MAXJ12_31007. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 99 AA; 11266 MW; 658A10432CDA53E9 CRC64; MNDVSDDRPQ LTPLVIGLTR PPMMWGIPLN AFYIILGVTL VAFLVTTSFW SALAGPFIYL VLFAFCSRDI RTLDLTQVAC RRTPRTPNRL FWRTNSYGP // ID H0RRV4_9BRAD Unreviewed; 87 AA. AC H0RRV4; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Conjugal transfer protein TrbB; GN ORFNames=BRAO285_1230015; OS Bradyrhizobium sp. ORS 285. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Bradyrhizobium. OX NCBI_TaxID=115808; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ORS285; RA Rouy Z.; RL Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ORS285; RA Mornico D., Miche L., Bena G., Nouwen N., Vermeglio A., Vallenet D., RA Smith A.A.T., Giraud E., Medigue C., Moulin L.; RT "Comparative Genomics of Aeschynomene Symbionts: Insights into the RT Ecological Lifestyle of Nod-Independent Photosynthetic RT Bradyrhizobia."; RL Genes (Basel) 3:35-61(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAFH01000028; CCD84681.1; -; Genomic_DNA. DR EnsemblBacteria; CCD84681; CCD84681; BRAO285_1230015. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 87 AA; 9759 MW; 9E68C26FFB533373 CRC64; MNDEIKGFSA PVHRSLTEPI LIGGAPRSVA ILNGTLSAAL GLGLRLWFFG LLLWFVCHML AVWATRRDPS FIEVVRRHLR IPNHLSQ // ID H0RZ34_9BRAD Unreviewed; 87 AA. AC H0RZ34; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Putative conjugal transfer protein trbD; GN ORFNames=BRAO285_2260004; OS Bradyrhizobium sp. ORS 285. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Bradyrhizobium. OX NCBI_TaxID=115808; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ORS285; RA Rouy Z.; RL Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ORS285; RA Mornico D., Miche L., Bena G., Nouwen N., Vermeglio A., Vallenet D., RA Smith A.A.T., Giraud E., Medigue C., Moulin L.; RT "Comparative Genomics of Aeschynomene Symbionts: Insights into the RT Ecological Lifestyle of Nod-Independent Photosynthetic RT Bradyrhizobia."; RL Genes (Basel) 3:35-61(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAFH01000142; CCD87211.1; -; Genomic_DNA. DR EnsemblBacteria; CCD87211; CCD87211; BRAO285_2260004. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 87 AA; 9568 MW; A1E77D31FD4257DE CRC64; MDEEVKGFAA PVHRSLTEPI LLGGAPRSVA IVNGTLSAAL GLGLRLWFFG LLLWFVGHMI AVWATKRDPS FIEVVRRHLR IPGHLGQ // ID H0SGQ3_9BRAD Unreviewed; 87 AA. AC H0SGQ3; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Conjugal transfer protein trbD; GN Name=trbD; ORFNames=BRAO375_2560049; OS Bradyrhizobium sp. ORS 375. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Bradyrhizobium. OX NCBI_TaxID=566679; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ORS375; RA Rouy Z.; RL Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ORS375; RA Mornico D., Miche L., Bena G., Nouwen N., Vermeglio A., Vallenet D., RA Smith A.A.T., Giraud E., Medigue C., Moulin L.; RT "Comparative Genomics of Aeschynomene Symbionts: Insights into the RT Ecological Lifestyle of Nod-Independent Photosynthetic RT Bradyrhizobia."; RL Genes (Basel) 3:35-61(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAFI01000175; CCD93380.1; -; Genomic_DNA. DR EnsemblBacteria; CCD93380; CCD93380; BRAO375_2560049. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 87 AA; 9615 MW; 8CABC6302AFCF8C7 CRC64; MSDEIKGFSA PVHRSLTEPI LIGGAPRSVA IINGTLSAAL GLGLRLWFFG LLLWFVGHMV AVWATRRDAA FVEVVRRHLR IPNHLSQ // ID H0SSK6_9BRAD Unreviewed; 87 AA. AC H0SSK6; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Conjugal transfer protein trbD; GN Name=trbD; ORFNames=BRAO375_960017; OS Bradyrhizobium sp. ORS 375. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Bradyrhizobium. OX NCBI_TaxID=566679; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ORS375; RA Rouy Z.; RL Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ORS375; RA Mornico D., Miche L., Bena G., Nouwen N., Vermeglio A., Vallenet D., RA Smith A.A.T., Giraud E., Medigue C., Moulin L.; RT "Comparative Genomics of Aeschynomene Symbionts: Insights into the RT Ecological Lifestyle of Nod-Independent Photosynthetic RT Bradyrhizobia."; RL Genes (Basel) 3:35-61(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAFI01000494; CCD97183.1; -; Genomic_DNA. DR EnsemblBacteria; CCD97183; CCD97183; BRAO375_960017. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 87 AA; 9648 MW; 8F2CBF0C77E9349F CRC64; MDEQVKGFVA PVHRSLTEPI LLGGAPRSVA IVNGTLSAAL GLGLRLWFFG LLLWFVGHVI AVWATKRDPW FVEVVRRHLR IPGHLGQ // ID H0SV04_9BRAD Unreviewed; 87 AA. AC H0SV04; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Conjugal transfer protein trbD; GN Name=trbD; ORFNames=BRAS3809_1570012; OS Bradyrhizobium sp. STM 3809. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Bradyrhizobium. OX NCBI_TaxID=551936; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=STM 3809; RA Rouy Z.; RL Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=STM 3809; RA Mornico D., Miche L., Bena G., Nouwen N., Vermeglio A., Vallenet D., RA Smith A.A.T., Giraud E., Medigue C., Moulin L.; RT "Comparative Genomics of Aeschynomene Symbionts: Insights into the RT Ecological Lifestyle of Nod-Independent Photosynthetic RT Bradyrhizobia."; RL Genes (Basel) 3:35-61(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAFJ01000065; CCD98031.1; -; Genomic_DNA. DR EnsemblBacteria; CCD98031; CCD98031; BRAS3809_1570012. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 87 AA; 9596 MW; 793542D777E93487 CRC64; MDEDVKGFVA PVHRSLTEPI LLGGAPRSVA IVNGTLSAAL GLGLRLWFFG LLLWFIGHMI AVWATKRDPS FLEVVRRHLR IPGHLGQ // ID H0U383_WOLPI Unreviewed; 98 AA. AC H0U383; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Putative Type IV secretion system protein VirB3 (VirB3 domain, ); GN ORFNames=WALBB_750008; OS Wolbachia pipientis wAlbB. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=1116230; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=WAlbB; RA MicroScope M.; RL Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=WAlbB; RX PubMed=22408242; DOI=10.1128/JB.00036-12; RA Mavingui P., Valiente Moro C., Tran-Van V., Wisniewski-Dye F., RA Raquin V., Minard G., Tran F.H., Voronin D., Rouy Z., Bustos P., RA Lozano L., Barbe V., Gonzalez V.; RT "Whole-Genome Sequence of Wolbachia Strain wAlbB, an Endosymbiont of RT Tiger Mosquito Vector Aedes albopictus."; RL J. Bacteriol. 194:1840-1840(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAGB01000139; CCE77774.1; -; Genomic_DNA. DR EnsemblBacteria; CCE77774; CCE77774; WALBB_750008. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10967 MW; 78387A0B42E26374 CRC64; MSTGSIQTNQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INTNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIT // ID H1ETN4_ECOLX Unreviewed; 917 AA. AC H1ETN4; DT 21-MAR-2012, integrated into UniProtKB/TrEMBL. DT 21-MAR-2012, sequence version 1. DT 16-APR-2014, entry version 9. DE SubName: Full=Uncharacterized protein; GN ORFNames=ESPG_04948; OS Escherichia coli H397. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=656398; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=H397; RG The Broad Institute Genome Sequencing Platform; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Feldgarden M., Gordon D.M., Johnson J.R., Johnston B.D., Young S.K., RA Zeng Q., Gargeya S., Fitzgerald M., Haas B., Abouelleil A., RA Alvarado L., Arachchi H.M., Berlin A., Brown A., Chapman S.B., RA Chen Z., Dunbar C., Freedman E., Gearin G., Gellesch M., Goldberg J., RA Griggs A., Gujja S., Heiman D., Howarth C., Larson L., Lui A., RA MacDonald P.J.P., Mehta T., Montmayeur A., Murphy C., Neiman D., RA Pearson M., Priest M., Roberts A., Saif S., Shea T., Shenoy N., RA Sisk P., Stolte C., Sykes S., Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Escherichia coli H397."; RL Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AEXH01000091; EHN90201.1; -; Genomic_DNA. DR EnsemblBacteria; EHN90201; EHN90201; ESPG_04948. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 917 AA; 105017 MW; A9A0B7EB9B5BCC38 CRC64; MSTLFKGLTR PALIRGLGVP LYPFLGMCII CVLLGVWIHE AMYALILPGW YAIRRVTQFD ERFFDLLYLR TLVKGHPLSN KRFSAVHYAG SQYDEVDISK VDNFMKLKDQ SSVEELIPYS SHITDNIIVT KNRDLLATWQ IDGAYFECVD SEDLSILTDQ LNTLIRSFEG KSVTLYPHRI RCKKDVRPVF NSKIPFVNRV MNDYYESFPQ SEFFENKLFL TICFKPFTTE DKVTHFFSRG KKQKDIFKEP VNEMNEICDR LNTYLSRFHS RRLGLYEDHG VVYSDQLSLF QYLLSGRWQK VRVSSSPFYT YLGGKDLFFG NDAGQITASD HARYFRCIEI KDYFQETDAG ILDALMYLPV EYVVTSSFTA MDKQSAIKAL DDQIDKLEMT DDAAKSLLAD LKVGLDMVSS GYISFGKSHQ TLVVFADSPE RLVKDTNIVT STLEDLGLIV TYSTLSLGAA YFAQLPGNYT LRPRLSTLSS LNFAEMESFH NFFSGKEKGN TWGEKLITLR GSGNDIYHLN YHMTTEHQNF FGKNPTLGHT EILGTSNVGK TVLLMTKAFA AQQFGTPESF PANRKLKKLT TVFFDKDRAG EVGIRAMGGS YYRVKEGEPT GWNPAALPPT KRNIAFMKDL VRLLCTLNSE PLDDYQNSLI SDAVERLMQR SDRSYPISKL RPLIQEPDDT ETKRHGLKAR LKPWTQGEEF GWVFDNREDT FDVDNLDVFG IDGTEFLDNK VLASAASFYL IYRVTMLADG RRLLIYMDEF WQWINNEAFR DFVYNKLKTG RKLDMVLVVA TQSPDELIKS PIAAAVREQC ATHIYLANPK AKRSEYVDGL QVRELYFDKI KAIDPLSRQF LVVKNPQRKG ESDDFAAFAR LELGKAAYYL PVLSASKPQL ELFDEIWKEG MKPEEWLDTY LEQANLI // ID H1HC36_FUSNU Unreviewed; 87 AA. AC H1HC36; DT 21-MAR-2012, integrated into UniProtKB/TrEMBL. DT 21-MAR-2012, sequence version 1. DT 13-NOV-2013, entry version 7. DE SubName: Full=Uncharacterized protein; GN ORFNames=HMPREF9942_00037; OS Fusobacterium nucleatum subsp. animalis F0419. OC Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; OC Fusobacterium. OX NCBI_TaxID=999414; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=OT 420; RG The Broad Institute Genome Sequencing Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Izard J., Blanton J.M., RA Mathney J., Tanner A.C., Dewhirst F.E., Young S.K., Zeng Q., RA Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Alvarado L., RA Arachchi H.M., Berlin A., Chapman S.B., Gearin G., Goldberg J., RA Griggs A., Gujja S., Hansen M., Heiman D., Howarth C., Larimer J., RA Lui A., MacDonald P.J.P., McCowen C., Montmayeur A., Murphy C., RA Neiman D., Pearson M., Priest M., Roberts A., Saif S., Shea T., RA Sisk P., Stolte C., Sykes S., Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Fusobacterium nucleatum subsp. animalis OT RT 420."; RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGEH01000003; EHO79547.1; -; Genomic_DNA. DR EnsemblBacteria; EHO79547; EHO79547; HMPREF9942_00037. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 87 AA; 10027 MW; BDB967D3992438E7 CRC64; MEEINLSEKI CRAFTTDITV AGGAREAVIG NFFLALILIF STDSGLVVLI VIILFTFSHG YLVYLTKKDT KFFKVFRSHL KFKEYYY // ID H1HF06_FUSNU Unreviewed; 95 AA. AC H1HF06; DT 21-MAR-2012, integrated into UniProtKB/TrEMBL. DT 21-MAR-2012, sequence version 1. DT 13-NOV-2013, entry version 7. DE SubName: Full=Uncharacterized protein; GN ORFNames=HMPREF9942_01057; OS Fusobacterium nucleatum subsp. animalis F0419. OC Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; OC Fusobacterium. OX NCBI_TaxID=999414; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=OT 420; RG The Broad Institute Genome Sequencing Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Izard J., Blanton J.M., RA Mathney J., Tanner A.C., Dewhirst F.E., Young S.K., Zeng Q., RA Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Alvarado L., RA Arachchi H.M., Berlin A., Chapman S.B., Gearin G., Goldberg J., RA Griggs A., Gujja S., Hansen M., Heiman D., Howarth C., Larimer J., RA Lui A., MacDonald P.J.P., McCowen C., Montmayeur A., Murphy C., RA Neiman D., Pearson M., Priest M., Roberts A., Saif S., Shea T., RA Sisk P., Stolte C., Sykes S., Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Fusobacterium nucleatum subsp. animalis OT RT 420."; RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGEH01000011; EHO78158.1; -; Genomic_DNA. DR EnsemblBacteria; EHO78158; EHO78158; HMPREF9942_01057. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 95 AA; 11168 MW; C5A1A1811BC0B1D9 CRC64; MSNQINEKDE HINFKIPIYQ SLTKDIMIAG VPLTFALLLF AGMFFSMMIL HNIIFFLIFL VIYFLLFLII KLSKKFDSKI LDILARVSLK PYIDY // ID H1HI38_FUSNU Unreviewed; 87 AA. AC H1HI38; DT 21-MAR-2012, integrated into UniProtKB/TrEMBL. DT 21-MAR-2012, sequence version 1. DT 13-NOV-2013, entry version 7. DE SubName: Full=Uncharacterized protein; GN ORFNames=HMPREF9942_02139; OS Fusobacterium nucleatum subsp. animalis F0419. OC Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; OC Fusobacterium. OX NCBI_TaxID=999414; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=OT 420; RG The Broad Institute Genome Sequencing Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Izard J., Blanton J.M., RA Mathney J., Tanner A.C., Dewhirst F.E., Young S.K., Zeng Q., RA Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Alvarado L., RA Arachchi H.M., Berlin A., Chapman S.B., Gearin G., Goldberg J., RA Griggs A., Gujja S., Hansen M., Heiman D., Howarth C., Larimer J., RA Lui A., MacDonald P.J.P., McCowen C., Montmayeur A., Murphy C., RA Neiman D., Pearson M., Priest M., Roberts A., Saif S., Shea T., RA Sisk P., Stolte C., Sykes S., Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Fusobacterium nucleatum subsp. animalis OT RT 420."; RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGEH01000027; EHO76115.1; -; Genomic_DNA. DR EnsemblBacteria; EHO76115; EHO76115; HMPREF9942_02139. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 87 AA; 10097 MW; 6086C1C55FE57045 CRC64; MEELDLREKI CRAFTTDITV AGGAREPVIG NFFLALILIF STDSGLVVLT VIILFTFSHG YLVYLTKKDT KFFKVFRSHL KFKDYYY // ID H1PYK1_9FUSO Unreviewed; 93 AA. AC H1PYK1; DT 21-MAR-2012, integrated into UniProtKB/TrEMBL. DT 21-MAR-2012, sequence version 1. DT 13-NOV-2013, entry version 6. DE SubName: Full=Uncharacterized protein; GN ORFNames=HMPREF0402_03494; OS Fusobacterium ulcerans 12-1B. OC Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; OC Fusobacterium. OX NCBI_TaxID=457404; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=12_1B; RG The Broad Institute Genome Sequencing Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Strauss J., Ambrose C.E., RA Allen-Vercoe E., Walker B., Young S.K., Zeng Q., Gargeya S., RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M., RA Berlin A.M., Chapman S.B., Goldberg J., Griggs A., Gujja S., RA Hansen M., Howarth C., Imamovic A., Larimer J., McCowen C., RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., RA Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J., RA Nusbaum C., Birren B.; RT "The Genome Sequence of Fusobacterium ulcerans 12_1B."; RL Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGWJ02000035; EHO77190.1; -; Genomic_DNA. DR EnsemblBacteria; EHO77190; EHO77190; HMPREF0402_03494. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 93 AA; 11092 MW; 131CEE21A1468CC3 CRC64; MEDRYTEADE NFYIPVYQVF TKEIMLFGLP RSMAIFFIGV MAFTGLSMKN FVLTIVFFIL YLIMVLVVKF VPKFDPKILE TIVRFSFKKY INY // ID H1RZU5_9BURK Unreviewed; 99 AA. AC H1RZU5; DT 21-MAR-2012, integrated into UniProtKB/TrEMBL. DT 21-MAR-2012, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=VirB3 protein; GN ORFNames=OR16_04257; OS Cupriavidus basilensis OR16. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Cupriavidus. OX NCBI_TaxID=1127483; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=OR16; RX PubMed=22461549; DOI=10.1128/JB.06752-11; RA Cserhati M., Kriszt B., Szoboszlay S., Toth A., Szabo I., Tancsics A., RA Nagy I., Horvath B., Nagy I., Kukolya J.; RT "De Novo Genome Project of Cupriavidus basilensis OR16."; RL J. Bacteriol. 194:2109-2110(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AHJE01000012; EHP44161.1; -; Genomic_DNA. DR EnsemblBacteria; EHP44161; EHP44161; OR16_04257. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 99 AA; 11103 MW; 285302CBFB23992C CRC64; MSHDEPFLED GEPLVAAMTR PAMLGGFTLT SIVLSLFIPG LIMMISRSVL TVVLVPAFLL VSYLVCLKDV YLFEIFVSAT RLSRCPNKHL WGCRRYAPR // ID H1XK96_9XANT Unreviewed; 99 AA. AC H1XK96; DT 21-MAR-2012, integrated into UniProtKB/TrEMBL. DT 21-MAR-2012, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretory pathway, VirB3-like family protein; GN Name=virB3; ORFNames=XAPC_3354; OS Xanthomonas axonopodis pv. punicae str. LMG 859. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=1085630; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=LMG 859; RX PubMed=22493202; DOI=10.1128/JB.00181-12; RA Sharma V., Midha S., Ranjan M., Pinnaka A.K., Patil P.B.; RT "Genome Sequence of Xanthomonas axonopodis pv. punicae Strain LMG RT 859."; RL J. Bacteriol. 194:2395-2395(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAGJ01000067; CCF69626.1; -; Genomic_DNA. DR EnsemblBacteria; CCF69626; CCF69626; XAPC_3354. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 99 AA; 11005 MW; 0B84524E2EFB780D CRC64; MSADEQFHDE GESLVAAMTR PTMVGGLTLA SLAMSFYFPG MAALITRSLW AAALIPVLLL ISYLVCLKDV YLFDIMSAAT HLKTCPNKRF WGCRRYAPR // ID H1ZMU3_KLEPN Unreviewed; 105 AA. AC H1ZMU3; DT 21-MAR-2012, integrated into UniProtKB/TrEMBL. DT 21-MAR-2012, sequence version 1. DT 13-NOV-2013, entry version 11. DE SubName: Full=TraA; DE SubName: Full=TraA (VirB3-type inner membrane protein); GN Name=traA; ORFNames=TR3_043, TR4_043; OS Klebsiella pneumoniae. OG Plasmid pJIE137, Plasmid pTR3, and Plasmid pTR4. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Klebsiella. OX NCBI_TaxID=573; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=JIE137; PLASMID=pJIE137; RX PubMed=22252811; DOI=10.1128/AAC.05796-11; RA Partridge S.R., Paulsen I.T., Iredell J.R.; RT "pJIE137 carrying blaCTX-M-62 is closely related to p271A carrying RT blaNDM-1."; RL Antimicrob. Agents Chemother. 56:2166-2168(2012). RN [2] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pTR3, and pTR4; RX PubMed=23139815; DOI=10.1371/journal.pone.0048737; RA Chen Y.T., Lin A.C., Siu L.K., Koh T.H.; RT "Sequence of Closely Related Plasmids Encoding bla(NDM-1) in Two RT Unrelated Klebsiella pneumoniae Isolates in Singapore."; RL PLoS ONE 7:E48737-E48737(2012). RN [3] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pTR3, and pTR4; RA Chen Y.-T., Lin A.-C., Siu K., Koh T.-H.; RL Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EF219134; AEY80218.1; -; Genomic_DNA. DR EMBL; JQ349085; AFO59797.1; -; Genomic_DNA. DR EMBL; JQ349086; AFO59848.1; -; Genomic_DNA. DR RefSeq; YP_006959330.1; NC_019163.1. DR GeneID; 13914137; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 105 AA; 12167 MW; 774FA6E9BDC94326 CRC64; MFENGQRPLF KGATRVPRLA GVPRTVALVI FMISATLFMT LHLWSLLVFA VLWSIAAALT KYDDRMFRIL SLWLQTKFRN AHDTPFKQWS GSSYSPVDYK KKELK // ID H1ZXZ5_ECOLX Unreviewed; 106 AA. AC H1ZXZ5; DT 21-MAR-2012, integrated into UniProtKB/TrEMBL. DT 21-MAR-2012, sequence version 1. DT 13-NOV-2013, entry version 4. DE SubName: Full=Conjugal transfer protein TraD; GN Name=traD; ORFNames=MM3_068; OS Escherichia coli. OG Plasmid pChi7122-3. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=562; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=APEC strain 7122; PLASMID=pChi7122-3; RA Aslett M.; RL Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=APEC strain 7122; PLASMID=pChi7122-3; RA Mellata M., Maddux J., Nam T., Thomson N., Hauser H., Stevens N.P., RA Mukhopadhyay S., Nickerson C., Sarker S., Crabbe A., Curtis III R.; RT "New insights into the fitness-associated mechanisms of ExPECs RT revealed by the genotypic and phenotypic characterization of large RT plasmids of APEC 7122 (O78:K80:H9)."; RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; FR851304; CCA64399.1; -; Genomic_DNA. DR RefSeq; YP_006903115.1; NC_019039.1. DR GeneID; 13900885; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 106 AA; 11911 MW; C4EA81CA50B7A574 CRC64; MDKVNEHVSE SFMTYNGFNR PALIAGIPLM LLLFTAFFAV LTGFPAIFLW GIKGIIIPVI CALFLFIVKL ACENDSNALR VIRLNLMGLL LKIRHRDLII GYSSVR // ID H2DDV0_9BACT Unreviewed; 104 AA. AC H2DDV0; DT 21-MAR-2012, integrated into UniProtKB/TrEMBL. DT 21-MAR-2012, sequence version 1. DT 13-NOV-2013, entry version 3. DE SubName: Full=Conserved hypothetical plasmid protein; GN Name=trwM; OS uncultured bacterium. OG Plasmid pHH2-227. OC Bacteria; environmental samples. OX NCBI_TaxID=77133; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pHH2-227; RA Krol J.E., Wojtowicz A.J., Heuer H., Rogers L.M., Krone S.M., RA Top E.M.; RT "Invasion of E. coli biofilms by multidrug resistance plasmids."; RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JN581942; AEY63605.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 104 AA; 12278 MW; BEB48D8F31D4D325 CRC64; MKPPQQQHEA FPLFKGATRL PTIWGVPMIP LMAMVMGVAV IALTVSIWWW ALVPPLWFIM AQITKNDDKA FRIWWLWIDT KFRNRNKGFW GASSYSPANY RKRR // ID H2EPM4_9BACT Unreviewed; 103 AA. AC H2EPM4; Q0VUW8; DT 21-MAR-2012, integrated into UniProtKB/TrEMBL. DT 21-MAR-2012, sequence version 1. DT 14-MAY-2014, entry version 8. DE SubName: Full=Conjugal transfer protein TrbD; DE SubName: Full=TrbD protein; GN Name=trbD; GN ORFNames=KS77_16, pHH128_16, pHH3408_16, pHH3414_16, pKJK5_6; OS uncultured bacterium. OG Plasmid pHH128, Plasmid pHH3408, Plasmid pHH3414, Plasmid pKJK5, OG Plasmid pKS77, Plasmid pMLUA1, Plasmid pMLUA3, and Plasmid pMLUA4. OC Bacteria; environmental samples. OX NCBI_TaxID=77133; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pKJK5; RX PubMed=17132149; DOI=10.1111/j.1574-6968.2006.00536.x; RA Bahl M.I., Hansen L.H., Sorensen S.J.; RT "Impact of conjugal transfer on the stability of IncP-1 plasmid pKJK5 RT in bacterial populations."; RL FEMS Microbiol. Lett. 266:250-256(2007). RN [2] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pHH128, pHH3408, pHH3414, and pKS77; RX PubMed=22279444; RA Heuer H., Thanh Binh C.T., Jechalke S., Kopmann C., Zimmerling U., RA Krogerrecklenfort E., Ledger T., Gonzalez B., Top E.M., Smalla K.; RT "IncP-1? Plasmids are Important Vectors of Antibiotic Resistance Genes RT in Agricultural Systems: Diversification Driven by Class 1 Integron RT Gene Cassettes."; RL Front. Microbiol. 3:2-2(2012). RN [3] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pMLUA1, pMLUA3, and pMLUA4; RX PubMed=23831558; RA Oliveira C.S., Moura A., Henriques I., Brown C.J., Rogers L.M., RA Top E.M., Correia A.; RT "Comparative genomics of IncP-1epsilon plasmids from water RT environments reveals diverse and unique accessory genetic elements."; RL Plasmid 0:0-0(2013). RN [4] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pMLUA1, pMLUA3, and pMLUA4; RA Oliveira C., Moura A., Henriques I., Brown C.J., Rogers L.M., RA Top E.M., Correia A.; RL Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JQ004406; AEX92044.1; -; Genomic_DNA. DR EMBL; JQ004407; AEX92107.1; -; Genomic_DNA. DR EMBL; JQ004408; AEX92166.1; -; Genomic_DNA. DR EMBL; JQ004409; AEX92227.1; -; Genomic_DNA. DR EMBL; KC964605; AGT55625.1; -; Genomic_DNA. DR EMBL; KC964606; AGT55693.1; -; Genomic_DNA. DR EMBL; KC964607; AGT55760.1; -; Genomic_DNA. DR EMBL; AM261282; CAK02647.1; -; Genomic_DNA. DR RefSeq; YP_709145.1; NC_008272.1. DR GeneID; 4226832; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11770 MW; 229CEDE2536B7842 CRC64; MALRAIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QEVRATVFGI GLWFGALYAC RLMAKSDPKL RHVYLRHRRY KGYYPARSTP FRDNTPSQGK QYK // ID H2ERY8_ALIFS Unreviewed; 100 AA. AC H2ERY8; DT 21-MAR-2012, integrated into UniProtKB/TrEMBL. DT 21-MAR-2012, sequence version 1. DT 11-DEC-2013, entry version 4. DE SubName: Full=Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB3); OS Aliivibrio fischeri (Vibrio fischeri). OG Plasmid pES657-44. OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; OC Vibrionaceae; Aliivibrio. OX NCBI_TaxID=668; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ES657; PLASMID=pES657-44; RA Summers A.O., Wireman J., Williams L.E.; RL Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JQ031551; AEY78155.1; -; Genomic_DNA. DR RefSeq; YP_005231058.1; NC_016853.1. DR GeneID; 11748114; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 100 AA; 11613 MW; CFBA611900A53552 CRC64; MSEPIFKACT RPSMLFSVPL VPLMLSNAII FLVSMWANFF GLGLWLFILT IPNYLTLRFI TKLDDANLSL LGLRFKCRRM NRNRSFYGAT VYSPLPFKKR // ID H2ITU8_RAHAC Unreviewed; 915 AA. AC H2ITU8; DT 21-MAR-2012, integrated into UniProtKB/TrEMBL. DT 21-MAR-2012, sequence version 1. DT 16-APR-2014, entry version 10. DE SubName: Full=Type IV secretory pathway, VirB4 component; GN OrderedLocusNames=Rahaq2_1731; OS Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC OS 105701 / NCIMB 13365 / CIP 78.65). OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Rahnella. OX NCBI_TaxID=745277; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / RC CIP 78.65; RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., RA Peters L., Ovchinnikova G., Held B., Detter J.C., Han C., Tapia R., RA Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Sobecky P., RA Martinez R., Woyke T.; RT "Complete sequence of chromosome of Rahnella aquatilis CIP 78.65."; RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003244; AEX51604.1; -; Genomic_DNA. DR RefSeq; YP_005199744.1; NC_016818.1. DR EnsemblBacteria; AEX51604; AEX51604; Rahaq2_1731. DR GeneID; 11791259; -. DR KEGG; raq:Rahaq2_1731; -. DR KO; K03199; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 915 AA; 103416 MW; B11146031D633C5E CRC64; MATLNKALTR PAAIAGIPLV PFVIVSGAIV LLAVYVSYYL VLLLIPAWLE MKAKARTDIH YFGLLWLAFK TRGRFGTNKH FGANALLANR YDAVDVSEFI EKMKLNERVT LEKYIPYSSH IHPHVIRNRQ GDLVASWELE GTVFECEDEH HLTLMATHLN NVIRAYEGLP ITFYLHRIRE KYHDVFDANS GIPFSDEVTR LYYQPISEKP LWRHRLFFTV CYAPFSPLEK KAMKAQPSGK RKAALDDALK VMLEHREALA SALSRYTATP LGMYEGNGRV YSAQLSFYHR LLTGNWQKVA VTRAPFYETL STPDVFFTTD TAECQTVGGS RFFRSLEIKD YSPETATGLL DALLYAESEY VLTQSFTCMA RDEAQKHIRL AEKRLTSADD DAISQREELI VLRDLLQSGH VSCGKYHFSL LVSSDSPEQV VKDANALAQP FADLGIMTTL STLSLPAAYL AQLPGNYTLR PRLVAVSSQN FADLASLHNF HPHKRNGNPW GDAIAILKSP GGGGYYLNLH DSQSGRDDFN AKTPGNTAII GKTGSGKTML MTMMQQLMQK YRNPATFSES ALLKQLTTVY FDKDRAAEMA IRQMGGRYFR IRTGTPTGFN PFKLAPTRRN ISFIKRVVRM LCGRNGKPLD PRDEERISAA VDTIMLDYPP EYRKFGITRL LEVLPEPPTP DARINGLRIR LKQWAQGGEF GWVFDNEEDT FNISDVENFG IDGTEFLDDD DIRGPITFYL LYRVTSLLDG RRLVMFMDEF WKWLADVEFS RFSLNMLKVI RKLNGIFVPA TQSPDEIVKH PIAPAIIEQC STQIFLANPK ASRADYVEKM KVPESVYDIV RNLDPGERSM VVLKTPLRAG ETRPFVAMAK MDLSGLGKLT KMLSGSEDNL KLFDTLYQEG MQPDDWKAAF LEQAL // ID H3K4Z6_9FIRM Unreviewed; 81 AA. AC H3K4Z6; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 19-MAR-2014, entry version 6. DE SubName: Full=Uncharacterized protein; GN ORFNames=HMPREF9454_00319; OS Megamonas funiformis YIT 11815. OC Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; OC Megamonas. OX NCBI_TaxID=742816; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=YIT 11815; RG The Broad Institute Genome Sequencing Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Morotomi M., Young S.K., RA Zeng Q., Gargeya S., Fitzgerald M., Haas B., Abouelleil A., RA Alvarado L., Arachchi H.M., Berlin A., Chapman S.B., Gearin G., RA Goldberg J., Griggs A., Gujja S., Hansen M., Heiman D., Howarth C., RA Larimer J., Lui A., MacDonald P.J.P., McCowen C., Montmayeur A., RA Murphy C., Neiman D., Pearson M., Priest M., Roberts A., Saif S., RA Shea T., Sisk P., Stolte C., Sykes S., Wortman J., Nusbaum C., RA Birren B.; RT "The Genome Sequence of Megamonas funiformis YIT 11815."; RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADMB01000014; EHR38926.1; -; Genomic_DNA. DR EnsemblBacteria; EHR38926; EHR38926; HMPREF9454_00319. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 81 AA; 9657 MW; 10B1919D764A0561 CRC64; MKYTIPVFKA LTERATLLGG PKEIVLLNAV LALIIWTMFN TLWIIPFNLI IHFFSIYVNK FDDRFFICLL KFLHKKKFYD V // ID H3KB28_9FIRM Unreviewed; 87 AA. AC H3KB28; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 19-MAR-2014, entry version 6. DE SubName: Full=Uncharacterized protein; GN ORFNames=HMPREF9454_02451; OS Megamonas funiformis YIT 11815. OC Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; OC Megamonas. OX NCBI_TaxID=742816; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=YIT 11815; RG The Broad Institute Genome Sequencing Platform; RA Earl A., Ward D., Feldgarden M., Gevers D., Morotomi M., Young S.K., RA Zeng Q., Gargeya S., Fitzgerald M., Haas B., Abouelleil A., RA Alvarado L., Arachchi H.M., Berlin A., Chapman S.B., Gearin G., RA Goldberg J., Griggs A., Gujja S., Hansen M., Heiman D., Howarth C., RA Larimer J., Lui A., MacDonald P.J.P., McCowen C., Montmayeur A., RA Murphy C., Neiman D., Pearson M., Priest M., Roberts A., Saif S., RA Shea T., Sisk P., Stolte C., Sykes S., Wortman J., Nusbaum C., RA Birren B.; RT "The Genome Sequence of Megamonas funiformis YIT 11815."; RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; ADMB01000108; EHR31888.1; -; Genomic_DNA. DR EnsemblBacteria; EHR31888; EHR31888; HMPREF9454_02451. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 87 AA; 10382 MW; 07550AEA8EEB598D CRC64; MKEKLPEGYE VPIHRSLVKP LFWMGVPRDL FLANIFLAVL GGVFFKTWTV IFVAVGVHYL FKYLGQKDPQ FHSVFWKART HKNYYYR // ID H3PEK0_BRUAO Unreviewed; 116 AA. AC H3PEK0; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 11-DEC-2013, entry version 6. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=M17_02791; OS Brucella abortus bv. 1 str. NI435a. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=1051055; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NI435a; RG The Broad Institute Genome Sequencing Platform; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Ward D., Whatmore A., Skuce R., Young S.K., Zeng Q., Gargeya S., RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M., RA Berlin A., Brown A., Chapman S.B., Dunbar C., Gearin G., Goldberg J., RA Griggs A., Gujja S., Heiman D., Howarth C., Lui A., MacDonald P.J.P., RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Brucella abortus bv. 1 NI435a."; RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGVF01000014; EHR08463.1; -; Genomic_DNA. DR ProteinModelPortal; H3PEK0; -. DR EnsemblBacteria; EHR08463; EHR08463; M17_02791. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID H3PL83_BRUAO Unreviewed; 116 AA. AC H3PL83; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 11-DEC-2013, entry version 6. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=M19_01995; OS Brucella abortus bv. 1 str. NI474. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=1051056; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NI474; RG The Broad Institute Genome Sequencing Platform; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Ward D., Whatmore A., Skuce R., Young S.K., Zeng Q., Gargeya S., RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M., RA Berlin A., Brown A., Chapman S.B., Dunbar C., Gearin G., Goldberg J., RA Griggs A., Gujja S., Heiman D., Howarth C., Lui A., MacDonald P.J.P., RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Brucella abortus bv. 1 NI474."; RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGVG01000010; EHR09061.1; -; Genomic_DNA. DR ProteinModelPortal; H3PL83; -. DR EnsemblBacteria; EHR09061; EHR09061; M19_01995. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID H3PW21_BRUAO Unreviewed; 116 AA. AC H3PW21; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 11-DEC-2013, entry version 6. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=M1A_02202; OS Brucella abortus bv. 1 str. NI486. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=1051057; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NI486; RG The Broad Institute Genome Sequencing Platform; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Ward D., Whatmore A., Skuce R., Young S.K., Zeng Q., Gargeya S., RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M., RA Berlin A., Brown A., Chapman S.B., Dunbar C., Gearin G., Goldberg J., RA Griggs A., Gujja S., Heiman D., Howarth C., Lui A., MacDonald P.J.P., RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Brucella abortus bv. 1 NI486."; RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGVH01000014; EHR09084.1; -; Genomic_DNA. DR ProteinModelPortal; H3PW21; -. DR EnsemblBacteria; EHR09084; EHR09084; M1A_02202. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID H3Q145_BRUAO Unreviewed; 116 AA. AC H3Q145; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 11-DEC-2013, entry version 6. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=M1E_00945; OS Brucella abortus bv. 1 str. NI488. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=1051058; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NI488; RG The Broad Institute Genome Sequencing Platform; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Ward D., Whatmore A., Skuce R., Young S.K., Zeng Q., Gargeya S., RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M., RA Berlin A., Brown A., Chapman S.B., Dunbar C., Gearin G., Goldberg J., RA Griggs A., Gujja S., Heiman D., Howarth C., Lui A., MacDonald P.J.P., RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Brucella abortus bv. 1 NI488."; RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGVI01000008; EHR24680.1; -; Genomic_DNA. DR ProteinModelPortal; H3Q145; -. DR EnsemblBacteria; EHR24680; EHR24680; M1E_00945. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID H3QD31_BRUAO Unreviewed; 116 AA. AC H3QD31; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 11-DEC-2013, entry version 6. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=M1G_01994; OS Brucella abortus bv. 1 str. NI010. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=1051059; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NI010; RG The Broad Institute Genome Sequencing Platform; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Ward D., Whatmore A., Skuce R., Young S.K., Zeng Q., Gargeya S., RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M., RA Berlin A., Brown A., Chapman S.B., Dunbar C., Gearin G., Goldberg J., RA Griggs A., Gujja S., Heiman D., Howarth C., Lui A., MacDonald P.J.P., RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Brucella abortus bv. 1 NI010."; RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGVJ01000010; EHR18880.1; -; Genomic_DNA. DR ProteinModelPortal; H3QD31; -. DR EnsemblBacteria; EHR18880; EHR18880; M1G_01994. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID H3QM08_BRUAO Unreviewed; 116 AA. AC H3QM08; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 11-DEC-2013, entry version 6. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=M1I_01994; OS Brucella abortus bv. 1 str. NI016. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=1051060; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NI016; RG The Broad Institute Genome Sequencing Platform; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Ward D., Whatmore A., Skuce R., Young S.K., Zeng Q., Gargeya S., RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M., RA Berlin A., Brown A., Chapman S.B., Dunbar C., Gearin G., Goldberg J., RA Griggs A., Gujja S., Heiman D., Howarth C., Lui A., MacDonald P.J.P., RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Brucella abortus bv. 1 NI016."; RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGVK01000008; EHR19283.1; -; Genomic_DNA. DR ProteinModelPortal; H3QM08; -. DR EnsemblBacteria; EHR19283; EHR19283; M1I_01994. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID H3QVY4_BRUAO Unreviewed; 116 AA. AC H3QVY4; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 11-DEC-2013, entry version 6. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=M1K_01992; OS Brucella abortus bv. 1 str. NI021. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=1051061; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NI021; RG The Broad Institute Genome Sequencing Platform; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Ward D., Whatmore A., Skuce R., Young S.K., Zeng Q., Gargeya S., RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M., RA Berlin A., Brown A., Chapman S.B., Dunbar C., Gearin G., Goldberg J., RA Griggs A., Gujja S., Heiman D., Howarth C., Lui A., MacDonald P.J.P., RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Brucella abortus bv. 1 NI021."; RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGVL01000010; EHR28302.1; -; Genomic_DNA. DR ProteinModelPortal; H3QVY4; -. DR EnsemblBacteria; EHR28302; EHR28302; M1K_01992. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID H3R2T7_BRUAO Unreviewed; 116 AA. AC H3R2T7; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 11-DEC-2013, entry version 6. DE SubName: Full=Type IV secretion system protein virB3; GN ORFNames=M1M_01277; OS Brucella abortus bv. 1 str. NI259. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=1051062; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NI259; RG The Broad Institute Genome Sequencing Platform; RG The Broad Institute Genome Sequencing Center for Infectious Disease; RA Ward D., Whatmore A., Skuce R., Young S.K., Zeng Q., Gargeya S., RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M., RA Berlin A., Brown A., Chapman S.B., Dunbar C., Gearin G., Goldberg J., RA Griggs A., Gujja S., Heiman D., Howarth C., Lui A., MacDonald P.J.P., RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., RA Wortman J., Nusbaum C., Birren B.; RT "The Genome Sequence of Brucella abortus bv. 1 NI259."; RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGVM01000006; EHR28549.1; -; Genomic_DNA. DR ProteinModelPortal; H3R2T7; -. DR EnsemblBacteria; EHR28549; EHR28549; M1M_01277. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID H3RLB8_PANSE Unreviewed; 912 AA. AC H3RLB8; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 16-APR-2014, entry version 5. DE SubName: Full=VirB4 family type IV secretion complex ATPase; GN ORFNames=CKS_0814; OS Pantoea stewartii subsp. stewartii DC283. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Pantoea. OX NCBI_TaxID=660596; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DC283; RX PubMed=22111898; DOI=10.1111/j.1365-2958.2011.07926.x; RA Wang X., Yang F., von Bodman S.B.; RT "The genetic and structural basis of two distinct terminal side branch RT residues in stewartan and amylovoran exopolysaccharides and their RT potential role in host adaptation."; RL Mol. Microbiol. 83:195-207(2012). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DC283; RA Biehl B.S., Ding Y., Dugan-Rocha S.P., Gibbs R.A., Glasner J.D., RA Kovar C., Muzny D.M., Neeno-Eckwall E.C., Perna N.T., Qin X., RA von Bodman S.B., Weinstock G.M.; RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AHIE01000041; EHT97802.1; -; Genomic_DNA. DR EnsemblBacteria; EHT97802; EHT97802; CKS_0814. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 912 AA; 103284 MW; 2159172122B6BBB4 CRC64; MAKLLKAMKR PAALWGVPMV PLLAVTGVTI IVAIWTTIAF LAFLPLEFLV MKSLTRKEPM RFNLIAVWLR AKGKPVANRL FGATTFMPVE HDAVDIREFL DAMKLNQCAA IRKYIPYSSH IHQHVVRSPK SDLYCTWELM GAPFDCESDE TLQFGTSQLH GLFRSFEGMP VTFYIHNDRN TFEDSLHKDS GNLYADEISR LYYASVGVFR RNRLFLTVCY RPFVSLEKAE RKRMKDSQKL KELDGALLEM LEIKSTLDTA LSRYGARPLG TFTEGNAVFS SQLAFYEYLL TRRWRKVRVT RTPAYDVMGA AALFFSAESG QINHANGTQY FRGLEVKEFS EETATGMMDS LLYAPCDYII TQSYTCMSRE EAKKAIKRTR RLLLSADDDA VSQRLDLDVA LDLLTSGKIA YGKHHFSIMV YSPSLESLVA DTNEISNALN NIGITPVPAE ISLSAAYMAQ LPGNYNLRPR KGELSSQNFV ELAALHNFYP GKRDKAPWGD AMALLRTPSG DGYYLNLHNT LADKDEFDEK NPASTCILGT NGSGKTMLMT YLEIMQQKYG REDSFSPDAK TKRLTTIYLD KDRGAEMNIR ALGGRYYRVI SGESTGWNPF SLPPTKRNIN FIKQLVKILC TRNGATITPR DERRLNDTVN AVMSDEPEYR RFGITRLREQ LPEPATKEAQ ENGLDIRLSQ WAQGGEFGWV FDNESDTFDI SNCDNFGIDG TEFLDDASVC APISFYLLYR ITSLLDGRRL VIFMDEFWKW LRDPVFKDFA YNKLKTIRKL NGMLVVGTQS PAEIIKDDIA PAVIEQCGTQ ILAANPNADR AHYVDGMKFE PEVFDVVKGL DPQARQYVVV KNQFRRGDTK RFAARVTLDL SGIGKYTKVM SGDSANLEIF ESIYREGMQP HEWLDTYLAK AL // ID H4F1G0_9RHIZ Unreviewed; 113 AA. AC H4F1G0; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN ORFNames=PDO_4200; OS Rhizobium sp. PDO1-076. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium. OX NCBI_TaxID=1125979; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=PDO-076; RX PubMed=22493196; DOI=10.1128/JB.00198-12; RA Brown S.D., Klingeman D.M., Lu T.Y., Johnson C.M., Utturkar S.M., RA Land M.L., Schadt C.W., Doktycz M.J., Pelletier D.A.; RT "Draft Genome Sequence of Rhizobium sp. Strain PDO1-076, a Bacterium RT Isolated from Populus deltoides."; RL J. Bacteriol. 194:2383-2384(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AHZC01000039; EHS53484.1; -; Genomic_DNA. DR EnsemblBacteria; EHS53484; EHS53484; PDO_4200. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 113 AA; 12701 MW; 80A4B677DBD3D859 CRC64; MVADRPTLEE DTLFIACTRP AMIAGVTMEA MGMNVMATTI FYLVAGSVAY ALVGLVFHFV FRALVKHDHN MFRILLAWIE TRGRTRNSAY WGGATLSPLR LARRFDERDI GFA // ID H4F3N6_9RHIZ Unreviewed; 93 AA. AC H4F3N6; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Conjugal transfer protein; GN ORFNames=PDO_1367; OS Rhizobium sp. PDO1-076. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium. OX NCBI_TaxID=1125979; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=PDO-076; RX PubMed=22493196; DOI=10.1128/JB.00198-12; RA Brown S.D., Klingeman D.M., Lu T.Y., Johnson C.M., Utturkar S.M., RA Land M.L., Schadt C.W., Doktycz M.J., Pelletier D.A.; RT "Draft Genome Sequence of Rhizobium sp. Strain PDO1-076, a Bacterium RT Isolated from Populus deltoides."; RL J. Bacteriol. 194:2383-2384(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AHZC01000099; EHS52607.1; -; Genomic_DNA. DR EnsemblBacteria; EHS52607; EHS52607; PDO_1367. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 93 AA; 10003 MW; 2C19B47DEA6DB9F4 CRC64; MVGGFQQEDE VRGFFATVHR SLAEPILLGG APRAVAIANG TLAAAVSLGL RLWIAGLVIW AIGHFVAVWA AKRDAQFVDV GRRHLRYPAH MGV // ID H4HR71_ECOLX Unreviewed; 915 AA. AC H4HR71; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 16-APR-2014, entry version 6. DE SubName: Full=Type IV secretion/conjugal transfer ATPase, VirB4 family protein; GN ORFNames=ECDEC1A_5233; OS Escherichia coli DEC1A. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=868133; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DEC1A; RX PubMed=22582382; DOI=10.1128/JB.00426-12; RA Hazen T.H., Sahl J.W., Redman J.C., Morris C.R., Daugherty S.C., RA Chibucos M.C., Sengamalay N.A., Fraser-Liggett C.M., Steinsland H., RA Whittam T.S., Whittam B., Manning S.D., Rasko D.A.; RT "Draft Genome Sequences of the Diarrheagenic Escherichia coli RT Collection."; RL J. Bacteriol. 194:3026-3027(2012). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DEC1A; RA Rasko D., Redman J., Daugherty S.C., Chibucos M.C., Tallon L., RA Sadzewicz L., Jones K., Santana-Cruz I., Liu X.; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIEV01000005; EHU16252.1; -; Genomic_DNA. DR EnsemblBacteria; EHU16252; EHU16252; ECDEC1A_5233. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 915 AA; 103920 MW; 2452315F26A946C4 CRC64; MSTLYKAMTR PAMYVGVPVV PLTVVAGALF LAGVYISKLI WLAIPVAVFI LRMITKQDDH IFNLYFLKLK MLGNSVCNRF FGARAFLSGQ YEAVEIDEFV NAMKLNERIT TGKYIPYSSH VDKNIVKTKN GDYVATWQLM GINFESISAE MLETIDSQVA TLVRSFSGLP VSFYNHSCRA SFYDAFTTKS GNKYADIISD CYYGSMKKNK FKGNTLYFTL IYRPDGRVEK LEKRKKSIKE KKDDIHIHVK RMNEMINTFS GALDKFTCKL LGMYEENGKV FSSQLSFYNY LLTGKLQKIR VTDSPVYNVL GGVDVFFNHD TGQICRIDGN KFFRSIEIKD FCSETASGVF DVLQYSDADY IITHSYTSMS KSEALSTIKR AEKQLKSTED DAVTQLQELE KAKNDIVSGD ISFGYYHFTI MVMADSIREL DESVSKITAD FTDLGIIPAL STMSLPAAYF AQLPAVFHLR PRLSPVSNVN FVELASFHNF YQGKRDKNCW TEAVAILKTP SKQAYYLNLH NSVLFKDETG EKNLANTKVI GTAGSGKTMF LSYLACSLQK YNNPETFADS AKNKKLTCVF LDKDRGAELC IRMLGGEYYT VKSGEPTGWN PFALEATKRN RIFVKQLMEI LCTRNGERLS TRERLLISES VDAVMDFPPG EMREYGITRM LEHLMQRDDR DEQENGIILR LSQWANSQAH GWVFDNAKDT FNIQHVNNFG IDGTEFLDDP MVCAPITFYL LYRITQLLDG RRLVIFLDEF WKWLQDEAFS DFVYNKLKTI RKLNGLVIPA TQSPDEILKN KISRAVVEVC STSIYLANPD ADYNDYVEGL KLTPEEFNII KNLDPMSRQF LIKKSSLKKG DGKSFSALAT LDLSGLGGYL KILSASADNL EIFESIYHEG MEPDDWVPEY LERAI // ID H4QBB5_ECOLX Unreviewed; 106 AA. AC H4QBB5; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretory pathway, VirB3-like family protein; GN ORFNames=ECDEC4B_5971; OS Escherichia coli DEC4B. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=868150; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DEC4B; RX PubMed=22582382; DOI=10.1128/JB.00426-12; RA Hazen T.H., Sahl J.W., Redman J.C., Morris C.R., Daugherty S.C., RA Chibucos M.C., Sengamalay N.A., Fraser-Liggett C.M., Steinsland H., RA Whittam T.S., Whittam B., Manning S.D., Rasko D.A.; RT "Draft Genome Sequences of the Diarrheagenic Escherichia coli RT Collection."; RL J. Bacteriol. 194:3026-3027(2012). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DEC4B; RA Rasko D., Redman J., Daugherty S.C., Chibucos M.C., Tallon L., RA Sadzewicz L., Jones K., Santana-Cruz I., Liu X.; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIFL01000085; EHU87561.1; -; Genomic_DNA. DR EnsemblBacteria; EHU87561; EHU87561; ECDEC4B_5971. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 106 AA; 11913 MW; 6BF48851126E3E28 CRC64; MDKVNEHVSE SFMTYNGFNR PALVSGIPLM LLLFTAFFAV LTGFPAIFLW GIKGIIIPVI CALFLFIVKL ACENDSNALR VIRLNLMGLL LKIRHRDLII GYSSVR // ID H4U3Z9_ECOLX Unreviewed; 912 AA. AC H4U3Z9; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 16-APR-2014, entry version 6. DE SubName: Full=CagE, TrbE, VirB, component of type IV transporter system family protein; GN ORFNames=ECDEC5E_2456; OS Escherichia coli DEC5E. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=868159; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DEC5E; RX PubMed=22582382; DOI=10.1128/JB.00426-12; RA Hazen T.H., Sahl J.W., Redman J.C., Morris C.R., Daugherty S.C., RA Chibucos M.C., Sengamalay N.A., Fraser-Liggett C.M., Steinsland H., RA Whittam T.S., Whittam B., Manning S.D., Rasko D.A.; RT "Draft Genome Sequences of the Diarrheagenic Escherichia coli RT Collection."; RL J. Bacteriol. 194:3026-3027(2012). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DEC5E; RA Rasko D., Redman J., Daugherty S.C., Chibucos M.C., Tallon L., RA Sadzewicz L., Jones K., Santana-Cruz I., Liu X.; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIFU01000013; EHV48069.1; -; Genomic_DNA. DR ProteinModelPortal; H4U3Z9; -. DR EnsemblBacteria; EHV48069; EHV48069; ECDEC5E_2456. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 912 AA; 103084 MW; 095C183866793052 CRC64; MAKLLKAMKR PAALWGVPMV PLLAVTGVTI IVAIWTSVAL LFLLPVQFLV MKSLTRNEPM RFNLIAVWLR AKGKPVANRL FGATTFMPVE HDDVDIKEFL DAMKLNQCAT IKKYIPYSSH IHQHVVRSPK SDLYCTWELM GTPFDCESDE SLQFGTNQLH GLIRSFEGMP VTFYIHNDRN TFTDNLHKDS GNPYADEVSR LYYASVGLFR RNRLFLTVCY RPFVSLEKAE RKRMKDSQKL KELDGALLEM LEIKSTLDTA LSRYGARPLG TFTEGNAVFS SQLAFYEYLL THQWRKVRVT RTPAYDVMGA AALFFSAESG QINHANGTQY FRGLEVKEFS EETATGMMDS LLYAPCDYVI TQSYTCMSRE EAKKAIKRTR RLLMSADDDA VSQRLDLDVA LDLLTSGKIA YGKHHFSIMV YSPSLESLVA DTNEISNALN NIGITPVPAE ISLSAAYMAQ LPGNYNLRPR KGELSSQNFV ELAALHNFYP GKRDKAPWGD AMALLRTPSG DGYYINLHNT LADKDEFNEK NPASTCILGT NGSGKTMLMT FFEIMQQKYG REDSFSPDAK TKRLTTVYLD KDRGAEMNIR ALGGRYYRVI SGESTGWNPF SLPATKRNIN FIKQLMKILC TRNGSTISPR DERRLSDAVN AVMNDEPQYR VYGITRMLEN LPEPATKEAQ ENGLSIRLSQ WAQGGEFGWV FDNESDTFDI SNCDNFGIDG TEFLDDASVC APISFYLLYR ITSLLDGRRL VIFMDEFWKW LRDPVFKDFA YNKLKTIRKL NGMLVVGTQS PAEIIKDDIA PAVIEQCGTQ ILAANPNADR AHYVDGMKFE PEVFDVVKGL DPQARQYVVV KNQFKRGDTK RFAARVTLDL SGIGRYTKVM SGDAPNLEIF ESIYREGMQP HEWLDTYLAK AL // ID H4UTP3_ECOLX Unreviewed; 911 AA. AC H4UTP3; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 16-APR-2014, entry version 6. DE SubName: Full=CagE, TrbE, VirB, component of type IV transporter system family protein; GN ORFNames=ECDEC6A_5397; OS Escherichia coli DEC6A. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=868160; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DEC6A; RX PubMed=22582382; DOI=10.1128/JB.00426-12; RA Hazen T.H., Sahl J.W., Redman J.C., Morris C.R., Daugherty S.C., RA Chibucos M.C., Sengamalay N.A., Fraser-Liggett C.M., Steinsland H., RA Whittam T.S., Whittam B., Manning S.D., Rasko D.A.; RT "Draft Genome Sequences of the Diarrheagenic Escherichia coli RT Collection."; RL J. Bacteriol. 194:3026-3027(2012). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DEC6A; RA Rasko D., Redman J., Daugherty S.C., Chibucos M.C., Tallon L., RA Sadzewicz L., Jones K., Santana-Cruz I., Liu X.; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIFV01000049; EHV49281.1; -; Genomic_DNA. DR EnsemblBacteria; EHV49281; EHV49281; ECDEC6A_5397. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 911 AA; 104001 MW; 1EE8FA4F111A328A CRC64; MASVFRALTR PPLLVGVPVA PALLSFFALF MSGLLVSKFI WFLIPLVHVL MKRKANKDEQ YFSLLYLWLK TRGNAAINRF YNVNTISCQN YDGVDVSEFI ESMKLNQRMP LEKRIPYSTH VDDYIIKNRD SSLVATWLVD GEPFESQTHD ALEMLTTHLN QSIVGFSGEP VTFYTHRIRY QYTDEFTSRS GNYYADEIAE RYYKGIKKKP FFKTVIYVSL CFLPYTKEEK AERKTKGAAF LDKTQKDAIL RMNELRGTVE SMLQHYRPER LGMYEDNGVV FSSQLSFYNY LLTGQWQKVR VPRMPYYSLL GNLDIFLSTD TAQFSNQRFF RSLEIKGYSR YTGTGLLDVL QYLPVEYVLT QSFTSMSKNE ALAAIKDKQK RLKGSGDDAK EEQEDLNVAR SMVTSGDISM GYYHYSLIVY ADSPEQLIKD SNTVQAALTD LGMIITLSTL SLAAAYLAQL PGVYNLRPRL TMLNSQNFVD LNALHSIQSG KRDKLPWGEA IAIARTNSHS PYYLGLHNSR IGSDDFNKKP PGNFKIIGTT GSGKTIMLTF IQDMLQKYGN PASFAPQTKI KRQTTVFFDK DRGAEMNIRA LGGEYYRVLA GVETGWNPFR LEANKRNRRF VKQLMKILVT GRGEKLTARQ ELDLFRATDD VMDLPLELRT FGISRLLENL PEDTTVEAQE NGLRLRLSQW KKGGDFGWIF DNEEDTFDIS KVDNFGIDGT EFLDDPDICG PITFYLLYRV TSLLDGRRLV IFFDEFWKWL GTEAFADFVY NMLKVIRKLN GVVGMATQSL DEALKNKVAK AIIELTATDF YLANPNADYK DYVEGAKVSP EHFEIIRNID PESRQLLVVK NPVRKGDVKK FASLISLDLS GLGDYTKVMS GSEDNLEIFD SIYKPGMKPE DWINTYLSQA L // ID H4Z5Q3_ECOLX Unreviewed; 876 AA. AC H4Z5Q3; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 16-APR-2014, entry version 6. DE SubName: Full=CagE, TrbE, VirB, component of type IV transporter system family protein; GN ORFNames=ECDEC8A_5416; OS Escherichia coli DEC8A. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=868170; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DEC8A; RX PubMed=22582382; DOI=10.1128/JB.00426-12; RA Hazen T.H., Sahl J.W., Redman J.C., Morris C.R., Daugherty S.C., RA Chibucos M.C., Sengamalay N.A., Fraser-Liggett C.M., Steinsland H., RA Whittam T.S., Whittam B., Manning S.D., Rasko D.A.; RT "Draft Genome Sequences of the Diarrheagenic Escherichia coli RT Collection."; RL J. Bacteriol. 194:3026-3027(2012). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DEC8A; RA Rasko D., Redman J., Daugherty S.C., Chibucos M.C., Tallon L., RA Sadzewicz L., Jones K., Santana-Cruz I., Liu X.; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIGF01000059; EHW02783.1; -; Genomic_DNA. DR EnsemblBacteria; EHW02783; EHW02783; ECDEC8A_5416. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 876 AA; 100564 MW; 3E823DE0FA788603 CRC64; MYALILPGWY AIRRVTQFDE RFFDLLYLRT LVKGHPLSNK RFSAVHYAGS QYDEVDISKV DNFMKLKDQS SVEELIPYSS HITDNIIVTK NRDLLATWQI DGAYFECVDS EDLSILTDQL NTLIRSFEGK SVTLYPHRIR CKKDVRPVFN SKIPFVNRVM NDYYESFPQS EFFENKLFLT ICFKPFTTED KVTHFFSRSK KQKDIFKEPV NEMNEICDRL NTYLSRFHSR RLGLYEDHGV VYSDQLSLFQ YLLSGRWQKV RVSSSPFYTY LGGKDLFFGN DAGQITASDH ARYFRCIEIK DYFQETDAGI LDALMYLPVE YVVTSSFTAM DKQSAIKALD DQIDKLEMTD DAAKSLLADL KVGLDMVSSG YISFGKSHQT LVVFADSPER LVKDTNIVTS TLEDLGLIVT YSTLSLGAAY FAQLPGNYTL RPRLSTLSSL NFAEMESFHN FFSGKEKGNT WGEKLITLRG SGNDIYHLNY HMTTEHQNFF GKNPTLGHTE ILGTSNVGKT VLLMTKAFAA QQFGTPESFP ANRKLKKLTT VFFDKDRAGE VGIRAMGGSY YRVKEGEPTG WNPAALPPTK RNIAFMKDLV RLLCTLNSEP LDDYQNSLIS DAVERLMQRS DRSYPISKLR PLIQEPDDTE TKRHGLKARL KPWTQGEEFG WVFDNREDTF DVDNLDVFGI DGTEFLDNKV LASAASFYLI YRVTMLADGR RLLIYMDEFW QWINNEAFRD FVYNKLKTGR KLDMVLVVAT QSPDELIKSP IAAAVREQCA THIYLANPKA KRSEYVDGLQ VRELYFDKIK ALDPLSRQFL VVKNPQRKGE SDDFAAFARL ELGKAAYYLP VLSASKPQLE LFDEIWKEGM KPEEWLDTYL EQANLI // ID H5AN97_ECOLX Unreviewed; 106 AA. AC H5AN97; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretory pathway, VirB3-like family protein; GN ORFNames=ECDEC8E_5532; OS Escherichia coli DEC8E. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=868174; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DEC8E; RX PubMed=22582382; DOI=10.1128/JB.00426-12; RA Hazen T.H., Sahl J.W., Redman J.C., Morris C.R., Daugherty S.C., RA Chibucos M.C., Sengamalay N.A., Fraser-Liggett C.M., Steinsland H., RA Whittam T.S., Whittam B., Manning S.D., Rasko D.A.; RT "Draft Genome Sequences of the Diarrheagenic Escherichia coli RT Collection."; RL J. Bacteriol. 194:3026-3027(2012). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DEC8E; RA Rasko D., Redman J., Daugherty S.C., Chibucos M.C., Tallon L., RA Sadzewicz L., Jones K., Santana-Cruz I., Liu X.; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIGJ01000005; EHW36714.1; -; Genomic_DNA. DR EnsemblBacteria; EHW36714; EHW36714; ECDEC8E_5532. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 106 AA; 11911 MW; C4EA81CA50B7A574 CRC64; MDKVNEHVSE SFMTYNGFNR PALIAGIPLM LLLFTAFFAV LTGFPAIFLW GIKGIIIPVI CALFLFIVKL ACENDSNALR VIRLNLMGLL LKIRHRDLII GYSSVR // ID H5FV27_ECOLX Unreviewed; 106 AA. AC H5FV27; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretory pathway, VirB3-like family protein; GN ORFNames=ECDEC10F_2099; OS Escherichia coli DEC10F. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=868185; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DEC10F; RX PubMed=22582382; DOI=10.1128/JB.00426-12; RA Hazen T.H., Sahl J.W., Redman J.C., Morris C.R., Daugherty S.C., RA Chibucos M.C., Sengamalay N.A., Fraser-Liggett C.M., Steinsland H., RA Whittam T.S., Whittam B., Manning S.D., Rasko D.A.; RT "Draft Genome Sequences of the Diarrheagenic Escherichia coli RT Collection."; RL J. Bacteriol. 194:3026-3027(2012). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DEC10F; RA Rasko D., Redman J., Daugherty S.C., Chibucos M.C., Tallon L., RA Sadzewicz L., Jones K., Santana-Cruz I., Liu X.; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIGU01000028; EHW97527.1; -; Genomic_DNA. DR EnsemblBacteria; EHW97527; EHW97527; ECDEC10F_2099. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 106 AA; 11911 MW; C4EA81CA50B7A574 CRC64; MDKVNEHVSE SFMTYNGFNR PALIAGIPLM LLLFTAFFAV LTGFPAIFLW GIKGIIIPVI CALFLFIVKL ACENDSNALR VIRLNLMGLL LKIRHRDLII GYSSVR // ID H5JCC0_ECOLX Unreviewed; 873 AA. AC H5JCC0; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 16-APR-2014, entry version 6. DE SubName: Full=CagE, TrbE, VirB, component of type IV transporter system family protein; GN ORFNames=ECDEC12C_5915; OS Escherichia coli DEC12C. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=868193; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DEC12C; RX PubMed=22582382; DOI=10.1128/JB.00426-12; RA Hazen T.H., Sahl J.W., Redman J.C., Morris C.R., Daugherty S.C., RA Chibucos M.C., Sengamalay N.A., Fraser-Liggett C.M., Steinsland H., RA Whittam T.S., Whittam B., Manning S.D., Rasko D.A.; RT "Draft Genome Sequences of the Diarrheagenic Escherichia coli RT Collection."; RL J. Bacteriol. 194:3026-3027(2012). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DEC12C; RA Rasko D., Redman J., Daugherty S.C., Chibucos M.C., Tallon L., RA Sadzewicz L., Jones K., Santana-Cruz I., Liu X.; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIHC01000034; EHX38797.1; -; Genomic_DNA. DR EnsemblBacteria; EHX38797; EHX38797; ECDEC12C_5915. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 873 AA; 100103 MW; E10A7F9B151C50B9 CRC64; MYALILPGWY AIRRVTQFDE RFFDLLYLRT LVKGHPLSNK RFSAVHYAGS QYNEVDISKV DNFMKLKDQS SVEELIPYSS HITDNIIVTK NRDLLATWQI DGAYFECVDS EDLSILTDQL NTLIRSFEGK SVTLYPHRIR CKKGVRPVFN SKIPFVNRVM NDYYESFPQS EFFENKLFLT ICFKPFTTED KVTHFFSRSK KQKDIFKEPV NEICDRLNTY LSRFHSRRLG LYEDHGVVYS DQLSLFQYLL SGRWQKVRVS SSPFYTYLGG KDLFFGNDAG QITASDHARY FRCIEIKDYF QETDAGILDA LMYLPVEYVV TSSFTAMDKQ SAIKALDDQI DKLEMTDDAA KSLLADLKVG LDMVSSGYIS FGKSHQTVVV FADSPERLVK DTNIVTSTLE DLGLIVTYST LSLGAAYFAQ LPGNYTLRPR LSTLSSLNFA EMESFHNFFS GKDKGNTWGE KLITLRGSGN DIYHLNYHMT TEHQNFFGKN PTLGHTEILG TSNVGKTVLL MTKAFAAQQF GTPESFPANR KLKKLTTVFF DKDRAGEVGI RAMGGSYYRV KEGEPTGWNP AALPPTKRNI AFMKDLVRLL CTLNSEPLDD YQNSLISDAV ERLMQRSDRS YPISKLRPLI QEPDDTETKR HGLKARLKPW TQGEEFGWVF DNREDTFDVD NLDVFGIDGT EFLDNKVLAS AASFYLIYRV TMLADGRRLL IYMDEFWQWI NNEAFRDFVY NKLKTGRKLD MVLVVATQSP DELIKSPIAA AVREQCATHI YLANPKAKRS EYVDGLQVRE LYFDKIKAID PLSRQFLVVK NPQRKGESDD FAAFARLELG KAAYYLPVLS ASKPQLELFD EIWKEGMKPE EWLDTYLEQA NLI // ID H5WLN5_9BURK Unreviewed; 110 AA. AC H5WLN5; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 22-JAN-2014, entry version 4. DE SubName: Full=Type IV secretory pathway, VirB3 component; GN ORFNames=BurJ1DRAFT_2187; OS Burkholderiales bacterium JOSHI_001. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales. OX NCBI_TaxID=864051; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=JOSHI_001; RG US DOE Joint Genome Institute; RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., RA Peters L., Mikhailova N., Zeytun A., Lu M., Detter J.C., Han C., RA Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., RA Smith J., Lewis G., Woyke T.; RT "Noncontiguous Finished sequence of Burkholderiales bacterium RT JOSHI_001."; RL Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM001438; EHR71027.1; -; Genomic_DNA. DR EnsemblBacteria; EHR71027; EHR71027; BurJ1DRAFT_2187. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 110 AA; 12697 MW; 59BC80A4E1EFB03C CRC64; MHGEAIYKGA TRPAMKLGIP LVPLVVLFGT GMLLIMWGGA LVSWWIALGV VVAFVPALLW MRFVTSKDDQ RFRQMFVAMK LRLHDRNRRF WHARSYAPTL YRGARDAWHV // ID H5WQ87_9BURK Unreviewed; 112 AA. AC H5WQ87; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 22-JAN-2014, entry version 4. DE SubName: Full=Type IV secretory pathway, VirB3 component; GN ORFNames=BurJ1DRAFT_2383; OS Burkholderiales bacterium JOSHI_001. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales. OX NCBI_TaxID=864051; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=JOSHI_001; RG US DOE Joint Genome Institute; RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., RA Peters L., Mikhailova N., Zeytun A., Lu M., Detter J.C., Han C., RA Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., RA Smith J., Lewis G., Woyke T.; RT "Noncontiguous Finished sequence of Burkholderiales bacterium RT JOSHI_001."; RL Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM001438; EHR71217.1; -; Genomic_DNA. DR EnsemblBacteria; EHR71217; EHR71217; BurJ1DRAFT_2383. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 112 AA; 12772 MW; 77133C1327B458EB CRC64; MHAEAIYKGA TRPAMKLGVP LVPLVVLFGT AMLLTMWGGA LLSWWVAVGV LSAVLPALLW MRFVTAKDDQ RFHQAFVAMK LRLHDRNRRF WHARSYSPTL YREASDAWFV QG // ID H5Y911_9BRAD Unreviewed; 87 AA. AC H5Y911; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 22-JAN-2014, entry version 4. DE SubName: Full=Type IV secretory pathway, TrbD component; GN ORFNames=Bra471DRAFT_01644; OS Bradyrhizobium sp. WSM471. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Bradyrhizobium. OX NCBI_TaxID=319017; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=WSM471; RG US DOE Joint Genome Institute; RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., RA Peters L., Lu M., Detter J.C., Han C., Tapia R., Land M., Hauser L., RA Kyrpides N., Ivanova N., Pagani I., Brau L., Yates R., O'Hara G., RA Rui T., Howieson J., Reeve W., Woyke T.; RT "The Noncontiguous Finished sequence of Bradyrhizobium sp. WSM471."; RL Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CM001442; EHR00991.1; -; Genomic_DNA. DR EnsemblBacteria; EHR00991; EHR00991; Bra471DRAFT_01644. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 87 AA; 9223 MW; DBFD595C5B1FA294 CRC64; MDEPVPGFVA PVHRALTEPI LMGGAPRSVA ILNGTLAAAL GLGLRLWLAG LLLAFIGHMA AVWAAKRDPE FVEVVRRHVR VPGHLSA // ID H6D9C2_9BACT Unreviewed; 105 AA. AC H6D9C2; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 26-JUN-2013, entry version 4. DE SubName: Full=Conjugal transfer protein TraA; GN Name=traA; ORFNames=pRSB201_25, pRSB203_20, pRSB205_14, pRSB206_14; OS uncultured bacterium. OG Plasmid pRSB201, Plasmid pRSB203, Plasmid pRSB205, and OG Plasmid pRSB206. OC Bacteria; environmental samples. OX NCBI_TaxID=77133; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pRSB201, pRSB203, pRSB205, and pRSB206; RA Eikmeyer F.G., Szczepanowski R., Wibberg D., Hadiati A., RA Schneiker-Bekel S., Rogers L.M., Brown C.J., Top E.M., Puehler A., RA Schlueter A.; RL Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pRSB201, pRSB203, pRSB205, and pRSB206; RX PubMed=22326849; DOI=10.1016/j.plasmid.2012.01.011; RA Eikmeyer F., Hadiati A., Szczepanowski R., Wibberg D., RA Schneiker-Bekel S., Rogers L.M., Brown C.J., Top E.M., Puhler A., RA Schluter A.; RT "The complete genome sequences of four new IncN plasmids from RT wastewater treatment plant effluent provide new insights into IncN RT plasmid diversity and evolution."; RL Plasmid 68:13-24(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JN102341; AEW28761.1; -; Genomic_DNA. DR EMBL; JN102342; AEW28813.1; -; Genomic_DNA. DR EMBL; JN102343; AEW28857.1; -; Genomic_DNA. DR EMBL; JN102344; AEW28909.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 105 AA; 12264 MW; BD45A3DAAC64DAF5 CRC64; MFVDGKRPLF KGATRLPRAL GVPRNVAMMI FMISASLFMI IHMWAILVFV FLWIPSAALT KYDDRMFRIM GLWLKTKFSN WFDSPFKQWG GSSYSSVDYK RKGLK // ID H6PDM9_RICCA Unreviewed; 95 AA. AC H6PDM9; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 22-JAN-2014, entry version 8. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=RCA_00480; OS Rickettsia canadensis str. CA410. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; belli group. OX NCBI_TaxID=1105107; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=CA410; RA Johnson S.L., Munk A.C., Han S., Bruce D.C., Dasch G.A.; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003304; AFB20675.1; -; Genomic_DNA. DR RefSeq; YP_005299157.1; NC_016929.1. DR EnsemblBacteria; AFB20675; AFB20675; RCA_00480. DR GeneID; 11860408; -. DR KEGG; rcc:RCA_00480; -. DR KO; K03198; -. DR BioCyc; RCAN1105107:GJVR-96-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10912 MW; 50DCD3D4A69169B4 CRC64; MAGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIFFI WNNGIMILFI ATVLHLIAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYRA NSYGI // ID H6PJP8_RICRI Unreviewed; 95 AA. AC H6PJP8; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 22-JAN-2014, entry version 7. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=RPN_06095; OS Rickettsia rickettsii str. Brazil. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=1105104; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Brazil; RA Johnson S.L., Davenport K.W., Han S., Bruce D.C., Dasch G.A.; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003305; AFB22688.1; -; Genomic_DNA. DR RefSeq; YP_005293159.1; NC_016913.1. DR EnsemblBacteria; AFB22688; AFB22688; RPN_06095. DR GeneID; 11867883; -. DR KEGG; rrb:RPN_06095; -. DR KO; K03198; -. DR BioCyc; RRIC1105104:GJWU-1119-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10750 MW; 7253E0673CBA777C CRC64; MAGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID H6PLL7_RICRI Unreviewed; 95 AA. AC H6PLL7; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 22-JAN-2014, entry version 7. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=RPL_00800; OS Rickettsia rickettsii str. Colombia. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=1105102; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Colombia; RA Johnson S.L., Munk A.C., Han S., Bruce D.C., Dasch G.A.; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003306; AFB23077.1; -; Genomic_DNA. DR RefSeq; YP_005285701.1; NC_016908.1. DR EnsemblBacteria; AFB23077; AFB23077; RPL_00800. DR GeneID; 11785522; -. DR KEGG; rrc:RPL_00800; -. DR KO; K03198; -. DR BioCyc; RRIC1105102:GJU0-150-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10750 MW; 7253E0673CBA777C CRC64; MAGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID H6PRG0_RICRI Unreviewed; 95 AA. AC H6PRG0; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 22-JAN-2014, entry version 7. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=RPO_00805; OS Rickettsia rickettsii str. Arizona. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=1105105; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Arizona; RA Johnson S.L., Davenport K.W., Han S., Bruce D.C., Dasch G.A.; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003307; AFB24430.1; -; Genomic_DNA. DR RefSeq; YP_005287054.1; NC_016909.1. DR EnsemblBacteria; AFB24430; AFB24430; RPO_00805. DR GeneID; 11786913; -. DR KEGG; rra:RPO_00805; -. DR KO; K03198; -. DR BioCyc; RRIC1105105:GKDS-153-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10750 MW; 7253E0673CBA777C CRC64; MAGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID H6PW21_RICP3 Unreviewed; 95 AA. AC H6PW21; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 14-MAY-2014, entry version 7. DE SubName: Full=Type IV secretion system protein VirB3; GN OrderedLocusNames=RSA_00760; OS Rickettsia philipii (strain 364D). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=481009; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=364D; RA Johnson S.L., Munk A.C., Han S., Bruce D.C., Dasch G.A.; RT "Complete genome sequence of Rickettsia philipii strain 364D."; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003308; AFB25764.1; -; Genomic_DNA. DR RefSeq; YP_005300221.1; NC_016930.1. DR EnsemblBacteria; AFB25764; AFB25764; RSA_00760. DR GeneID; 11894954; -. DR KEGG; rph:RSA_00760; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR BioCyc; RPHI481009:GLJC-144-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10750 MW; 7253E0673CBA777C CRC64; MAGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID H6PXD1_RICRI Unreviewed; 95 AA. AC H6PXD1; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 22-JAN-2014, entry version 7. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=RPJ_00795; OS Rickettsia rickettsii str. Hino. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=1105100; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Hino; RA Johnson S.L., Sims D., Han S., Bruce D.C., Dasch G.A.; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003309; AFB27115.1; -; Genomic_DNA. DR RefSeq; YP_005293548.1; NC_016914.1. DR EnsemblBacteria; AFB27115; AFB27115; RPJ_00795. DR GeneID; 11865538; -. DR KEGG; rrn:RPJ_00795; -. DR KO; K03198; -. DR BioCyc; RRIC1105100:GJW1-151-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10750 MW; 7253E0673CBA777C CRC64; MAGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID H6Q219_RICRI Unreviewed; 95 AA. AC H6Q219; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 22-JAN-2014, entry version 7. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=RPK_00770; OS Rickettsia rickettsii str. Hlp#2. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=1105101; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Hlp#2; RA Johnson S.L., Davenport K.W., Han S., Bruce D.C., Dasch G.A.; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003311; AFB28460.1; -; Genomic_DNA. DR RefSeq; YP_005294880.1; NC_016915.1. DR EnsemblBacteria; AFB28460; AFB28460; RPK_00770. DR GeneID; 11864188; -. DR KEGG; rrp:RPK_00770; -. DR KO; K03198; -. DR BioCyc; RRIC1105101:GJU5-147-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10750 MW; 7253E0673CBA777C CRC64; MAGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID H6QGG9_RICRI Unreviewed; 95 AA. AC H6QGG9; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 22-JAN-2014, entry version 7. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=RPM_00805; OS Rickettsia rickettsii str. Hauke. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=1105103; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Hauke; RA Johnson S.L., Munk A.C., Han S., Bruce D.C., Dasch G.A.; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003318; AFB29774.1; -; Genomic_DNA. DR RefSeq; YP_005288410.1; NC_016911.1. DR EnsemblBacteria; AFB29774; AFB29774; RPM_00805. DR GeneID; 11788311; -. DR KEGG; rrh:RPM_00805; -. DR KO; K03198; -. DR BioCyc; RRIC1105103:GJY3-153-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10750 MW; 7253E0673CBA777C CRC64; MAGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID H6QKT9_RICMA Unreviewed; 95 AA. AC H6QKT9; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 22-JAN-2014, entry version 7. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=RMB_00830; OS Rickettsia massiliae str. AZT80. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=1105112; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=AZT80; RA Johnson S.L., Munk A.C., Han S., Bruce D.C., Dasch G.A.; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003319; AFB31094.1; -; Genomic_DNA. DR RefSeq; YP_005301554.1; NC_016931.1. DR EnsemblBacteria; AFB31094; AFB31094; RMB_00830. DR GeneID; 11893711; -. DR KEGG; rmi:RMB_00830; -. DR KO; K03198; -. DR BioCyc; RMAS1105112:GLJ9-133-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10835 MW; 15269E8D69B84135 CRC64; MVGTLASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTN QCPNKFYYGA NSYNI // ID H6SJS0_RHOPH Unreviewed; 93 AA. AC H6SJS0; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 29-MAY-2013, entry version 5. DE SubName: Full=Conjugal transfer protein; GN ORFNames=RSPPHO_01609; OS Rhodospirillum photometricum DSM 122. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Rhodospirillaceae; Rhodospirillum. OX NCBI_TaxID=1150469; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DSM 122; RA Duquesne K., Sturgis J.; RT "Shotgun genome sequence of Phaeospirillum photometricum DSM 122."; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HE663493; CCG08235.1; -; Genomic_DNA. DR RefSeq; YP_005417205.1; NC_017059.1. DR EnsemblBacteria; CCG08235; CCG08235; RSPPHO_01609. DR GeneID; 12212299; -. DR KEGG; rpm:RSPPHO_01609; -. DR KO; K03198; -. DR BioCyc; RPHO1150469:GLJ6-1716-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 93 AA; 9779 MW; CDD68AC9D212A316 CRC64; MAGMADHAGD VPGYAVPVHR ALTEHILLGG APRGLAILNG TLAAALGLGL RLWLVGLVIW AIGHLAAVWA AKRDPMFVDV VRRHLRIPGH LGV // ID H6SKU1_RHOPH Unreviewed; 86 AA. AC H6SKU1; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 29-MAY-2013, entry version 5. DE SubName: Full=Conjugal transfer protein; GN ORFNames=RSPPHO_01980; OS Rhodospirillum photometricum DSM 122. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Rhodospirillaceae; Rhodospirillum. OX NCBI_TaxID=1150469; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DSM 122; RA Duquesne K., Sturgis J.; RT "Shotgun genome sequence of Phaeospirillum photometricum DSM 122."; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HE663493; CCG08606.1; -; Genomic_DNA. DR RefSeq; YP_005417576.1; NC_017059.1. DR EnsemblBacteria; CCG08606; CCG08606; RSPPHO_01980. DR GeneID; 12212669; -. DR KEGG; rpm:RSPPHO_01980; -. DR KO; K03198; -. DR BioCyc; RPHO1150469:GLJ6-2093-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 86 AA; 9091 MW; 528B2083B0BD101C CRC64; MMSIDGFEVP LHRALTEPIL LGGAPRTLAI VNGTVAAALG LGLQMWSAGI VLWLVGHSVA VFAAKRDPDF ASVLARHLRQ KGELSC // ID H7EGD3_SALHO Unreviewed; 103 AA. AC H7EGD3; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 22-JAN-2014, entry version 5. DE SubName: Full=Conjugal transfer protein; GN ORFNames=SEHO0A_pSEHO0A1p05701; OS Salmonella enterica subsp. houtenae str. ATCC BAA-1581. OG Plasmid pSEHO0A1. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella. OX NCBI_TaxID=523831; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ATCC BAA-1581; PLASMID=pSEHO0A1; RA McClelland M., Clifton S., Porwollik S., Cheng P., Wollam A., RA Rotter K., Pepin K., Bhonagiri V., Fulton R., Fulton L.F., RA Delehaunty K., Fronick C., O'Laughlin M., Godfrey J., Waligorski J., RA Appelbaum E., Farmer C., Strong C., Tomlinson C., Hou S., Minx P., RA Warren W., Wilson R.K.; RL Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AGRM01000006; EHY67066.1; -; Genomic_DNA. DR EnsemblBacteria; EHY67066; EHY67066; SEHO0A_pSEHO0A1p05701. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 103 AA; 11802 MW; 8F4CEDEE6B161847 CRC64; MALRAIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QEVRATVFGI ALWFGALFAL RLMAKADPKL RHVYLRHRRY KPYYPARSTP FRDNTPSQGK QYK // ID H7R2Q8_CAMCO Unreviewed; 95 AA. AC H7R2Q8; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 29-MAY-2013, entry version 4. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=cco10_09021; OS Campylobacter coli 90-3. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887286; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=90-3; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=90-3; RX PubMed=23279811; RA Richards V.P., Lefebure T., Pavinski Bitar P.D., Stanhope M.J.; RT "Comparative characterization of the virulence gene clusters RT (lipooligosaccharide [LOS] and capsular polysaccharide [CPS]) for RT Campylobacter coli, Campylobacter jejuni subsp. jejuni and related RT Campylobacter species."; RL Infect. Genet. Evol. 14:200-213(2013). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIMJ01000051; EIA40820.1; -; Genomic_DNA. DR EnsemblBacteria; EIA40820; EIA40820; cco10_09021. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 95 AA; 10955 MW; 0B3470DF9FD7E9F5 CRC64; MEELKGIDIY SALNKPNLIF GADRELILMV GVISFALIFT GATLLTSIIG IFLFFFCNML LRLMAKSDPL MRQIFLRQIK YKKFYYAQST PFSKD // ID H7RC03_CAMCO Unreviewed; 922 AA. AC H7RC03; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 16-APR-2014, entry version 5. DE SubName: Full=Cmgb3/4; GN ORFNames=cco105_06745; OS Campylobacter coli 2548. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887315; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=2548; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIML01000039; EIA47177.1; -; Genomic_DNA. DR EnsemblBacteria; EIA47177; EIA47177; cco105_06745. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 922 AA; 106276 MW; A4C27FC07C9418EC CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGS IILVAFYSQN IFLVGFSIPV FFIMKAMTKK DDFIFRLMFL KMRFFSNPAS KNYYKAKTYS TNSYRQMPPN SNFPKISVFG LNAEPNFEKL IPFSSLINDS VVITKDYLLM TTWEIGGISF EAEDDDELDI KNDLLNMLFK SFANEPVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLKKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSK QLEFYNYLLG GKFNPIRVLP SPIDQYLNGN LQNIQFGHDT IQFNQNDSTK RFARCIEIKD YTNETFAGIL DILMYLDVEY TITQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVEQID EALDQLTNGE ISFGKYHFSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN FSSLIALHNF SMGKRDKNCW GDAVSILKTP NKQPYYFNFH QSSGVNKNDF GELFLANTLI LGQSSGGKTV FMNFIVDQMM KYASKDTFPD DIPEENRKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVENT QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDN LDFPDDINLF GIDGTEFLDD KDVSEILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSLEDFLK LKNAATLIEQ SSTMVFLSNP KAKEEEYVKG VGLSYDEYMI IKGFNPAKRQ FLIKRQDEKV ICTLDLSPLG NENLKILSTE TAYIDVIEKI FSQENKSLDE KVLELKEIYK NS // ID H7RGJ1_CAMCO Unreviewed; 922 AA. AC H7RGJ1; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 16-APR-2014, entry version 5. DE SubName: Full=Type IV secretion system protein VirB4; GN ORFNames=cco106_05111; OS Campylobacter coli 2553. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887316; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=2553; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=2553; RX PubMed=23279811; RA Richards V.P., Lefebure T., Pavinski Bitar P.D., Stanhope M.J.; RT "Comparative characterization of the virulence gene clusters RT (lipooligosaccharide [LOS] and capsular polysaccharide [CPS]) for RT Campylobacter coli, Campylobacter jejuni subsp. jejuni and related RT Campylobacter species."; RL Infect. Genet. Evol. 14:200-213(2013). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIMM01000031; EIA50443.1; -; Genomic_DNA. DR EnsemblBacteria; EIA50443; EIA50443; cco106_05111. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 922 AA; 106053 MW; D28387858BEC2393 CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGS IILVAFYSQN IFLVGFSIPV FFIMKAMTKK DDFIFRLMFL KMRFFSNPAS KNYYKAKTYS TNSYRQMPPN SNFPKISVFG LNAEPNFEKL IPFSSLINDS VVITKDYLLM TTWEIGGISF EAEDDDELDI KNDLLNMLFK SFANEPVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLKKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSK QLEFYNYLLG GKFNPIRVLP SPIDQYLNGN LQNIQFGHDT IQFNQNDSTK RFARCIEIKD YTNETFAGIL DILMYLDVEY TITQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVEQID EALDQLTNGE ISFGKYHFSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN FSSLIALHNF SMGKRDKNCW GDAVSILKTP NKQPYYFNFH QSSGVNKNDF GELFLANTLI LGQSGGGKTV FMNFIVDQMM KYASKDTFPD DIPEENRKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVENT QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDS LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSVEDFLK LKNATTLIEQ SATMVFLPNP KAKEEEYVKG VGLSYDEYMI IKGFNVAKRQ FLIKRQDEKV ICTLDLSSLG NENLKILSTG TAHIDTIEKI FSQENKSLDE KVLELKEIYK NS // ID H7RIR9_CAMCO Unreviewed; 95 AA. AC H7RIR9; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 29-MAY-2013, entry version 4. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=cco106_09206; OS Campylobacter coli 2553. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887316; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=2553; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=2553; RX PubMed=23279811; RA Richards V.P., Lefebure T., Pavinski Bitar P.D., Stanhope M.J.; RT "Comparative characterization of the virulence gene clusters RT (lipooligosaccharide [LOS] and capsular polysaccharide [CPS]) for RT Campylobacter coli, Campylobacter jejuni subsp. jejuni and related RT Campylobacter species."; RL Infect. Genet. Evol. 14:200-213(2013). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIMM01000112; EIA46567.1; -; Genomic_DNA. DR EnsemblBacteria; EIA46567; EIA46567; cco106_09206. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 95 AA; 11054 MW; F0C02E71D53347AB CRC64; MEELQRIDIY SALNKPNLIF GADRELILMV GVISFALIFT GATLLTSIIG IFLFFFCNML LRLMAKSDPL MRQIFLRQIK YKKFYYAQST PFSKD // ID H7RP16_CAMCO Unreviewed; 95 AA. AC H7RP16; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=cco111_08942; OS Campylobacter coli 2680. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887317; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=2680; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIMN01000065; EIA46187.1; -; Genomic_DNA. DR EnsemblBacteria; EIA46187; EIA46187; cco111_08942. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 95 AA; 11054 MW; F0C02E71D53347AB CRC64; MEELQRIDIY SALNKPNLIF GADRELILMV GVISFALIFT GATLLTSIIG IFLFFFCNML LRLMAKSDPL MRQIFLRQIK YKKFYYAQST PFSKD // ID H7RVW0_CAMCO Unreviewed; 95 AA. AC H7RVW0; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=cco113_02360; OS Campylobacter coli 2688. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887319; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=2688; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIMP01000020; EIA56319.1; -; Genomic_DNA. DR EnsemblBacteria; EIA56319; EIA56319; cco113_02360. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 95 AA; 11054 MW; F0C02E71D53347AB CRC64; MEELQRIDIY SALNKPNLIF GADRELILMV GVISFALIFT GATLLTSIIG IFLFFFCNML LRLMAKSDPL MRQIFLRQIK YKKFYYAQST PFSKD // ID H7S323_CAMCO Unreviewed; 95 AA. AC H7S323; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=cco115_05228; OS Campylobacter coli 2692. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887320; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=2692; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIMQ01000045; EIA55235.1; -; Genomic_DNA. DR EnsemblBacteria; EIA55235; EIA55235; cco115_05228. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 95 AA; 11054 MW; F0C02E71D53347AB CRC64; MEELQRIDIY SALNKPNLIF GADRELILMV GVISFALIFT GATLLTSIIG IFLFFFCNML LRLMAKSDPL MRQIFLRQIK YKKFYYAQST PFSKD // ID H7SII4_CAMCO Unreviewed; 922 AA. AC H7SII4; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 16-APR-2014, entry version 6. DE SubName: Full=Uncharacterized protein; GN ORFNames=cco14_07270; OS Campylobacter coli 80352. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887288; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=80352; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIMT01000070; EIA63157.1; -; Genomic_DNA. DR EnsemblBacteria; EIA63157; EIA63157; cco14_07270. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 922 AA; 106365 MW; 4D1A7355C98C076F CRC64; MQKNPLFKGL TRPPMIFGVP MVPLVLAMGG IFLLAFYSQN IFLIAFAIPV FFIMKAMTKR DDFIFRLMFL KMRFFSNPAS KNYHKVKTYS TNSYRQMPPN SNFPKISVFG LNAEPSFEKF IPFSSLISES VVITKDYLLM TTWEIEGISF EAEEDDELDI KNDLLNMLFK SFANEPVSFY FHNCRYSIED KLTSKFSNAF LEEIDRKYYE SFKQGTLRKN SLYLTLIFNP LKVKIEKTTF MKSSFETKRK TISLFLTKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSG QLEFYNYLLG GKFNPIRVLP SPIDQYLNGN LQNIQFGHDT IQFNQNDSTK RFARCIEIKD YTNETFAGIL DILMYLDVEY TITQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVEQID EALDQLTNGE ISFGKYHFSI LVYGNTIKEC KDNTNEVVTK MNELGFAVTL ATIALPATFF SQLPSNFAIR PRINLISSIN YSSLIALHNF SMGKRDKNCW GDAVSILKTP NKQPYYFNFH QSSGVNKNDF GKFFLANTLI LGQSSGGKTV FMNFIVDQMM KYASKDTFPD DIPEDKRKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVENT QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDN LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSLEDFLK LKNAATLIEQ SSTMVFLSNP KAKEEEYVKG VGLSYDEYMI IKGFNPAKRQ FLIKRQDEKV ICTLDLSPLG NENLKILSTE TAYIDVIEKI FSQENKSLDE KVLELKEFYK NS // ID H7SJN1_CAMCO Unreviewed; 95 AA. AC H7SJN1; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=cco14_09327; OS Campylobacter coli 80352. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887288; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=80352; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIMT01000104; EIA62359.1; -; Genomic_DNA. DR EnsemblBacteria; EIA62359; EIA62359; cco14_09327. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 95 AA; 10927 MW; 8F08D18AC79847CD CRC64; MEELQKIDIY SALNKPNLIF GADRELILML GIVSFALIFT GATLLTSIVG ITLFFICSIL LRLMAKSDPL MRQIFIRQIK YKKFYYPQST PFSKD // ID H7SM95_CAMCO Unreviewed; 922 AA. AC H7SM95; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 16-APR-2014, entry version 5. DE SubName: Full=Cmgb3/4; GN ORFNames=cco16_03026; OS Campylobacter coli 86119. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887289; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=86119; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIMU01000009; EIA61890.1; -; Genomic_DNA. DR EnsemblBacteria; EIA61890; EIA61890; cco16_03026. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 922 AA; 106226 MW; B94428898A5829D8 CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGS IILVAFYSQN IFLVGFSIPV FFIMKAMTKK DDFIFRLMFL KMRFFSNPAS KNYYKAKTYS TNSYRQMPPN SNFPKISVFG LNAEPNFEKL IPFSSLINDS VVITKDYLLM TTWEIGGISF EAEDDDELDI KNDLLNMLFK SFANEPVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLKKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSK QLEFYNYLLG GKFNPIRVLP SPIDQYLNGN LQNIQFGHDT IQFNQNDSTK RFARCIEIKD YTNETFAGIL DILMYLDVEY TITQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVEQID EALDQLTNGE ISFGKYHFSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN YSSLIALHNF SMGKRDKNCW GDAVSILKTP NKQPYYFNFH QSSGANKNDF GKFFLANTLI LGQSSGGKTV FMNFIVDQMM KYASKDTFPD DIPEDKRKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVEST QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDN LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSLEDFLK LKNAATLIEQ SSTMVFLSNP KAKEEEYVKG VGLSYDEYMI IKGFNPVKRQ FLIKRQDEKV ICTLDLSPLG NENLKILSTE TAYIDVIEKI FSQENKSLDE KVLELKEIYK NS // ID H7SQ62_CAMCO Unreviewed; 95 AA. AC H7SQ62; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=cco16_08190; OS Campylobacter coli 86119. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887289; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=86119; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIMU01000039; EIA60514.1; -; Genomic_DNA. DR EnsemblBacteria; EIA60514; EIA60514; cco16_08190. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 95 AA; 11054 MW; F0C02E71D53347AB CRC64; MEELQRIDIY SALNKPNLIF GADRELILMV GVISFALIFT GATLLTSIIG IFLFFFCNML LRLMAKSDPL MRQIFLRQIK YKKFYYAQST PFSKD // ID H7T613_CAMCO Unreviewed; 922 AA. AC H7T613; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 16-APR-2014, entry version 6. DE SubName: Full=Uncharacterized protein; GN ORFNames=cco25_08656; OS Campylobacter coli 1148. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887292; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=1148; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIMX01000058; EIA68132.1; -; Genomic_DNA. DR EnsemblBacteria; EIA68132; EIA68132; cco25_08656. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 922 AA; 106217 MW; 9BAB47706D90F3F4 CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGC IILIAFYSQN IFLVGFSIPV FFIMKAMTKR DDFIFRLMFL KMRFFSNPAS KNYHKVKTYS TNSYRQMPPN SNFPKISVFG LNAEPNFEKL IPFSSLINDS VVITKDYLLM TTWEIGGISF EAEDDDELDI KNDLLNMLFK SFANEPVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLRKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSK QLEFYNYLFG GKFNPIRVLS SPIDQYLNGN LQNIQFGHDT IQFNQNDSTK KFARCIEIKD YTNETFAGIL DILMYLDVEY TITQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVEQID EALDQLTNGE ISFGKYHFSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN YSSLIALHNF SMGKRDKNCW GDAVSILKTP NKQPYYFNFH QSSGANKNDF GELFLANTLI LGQSGGGKTV FMNFIVDQMM KYASKDTFPD DIPEENRKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVEST QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDN LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSVEDFLK LKNATTLIEQ SATMVFLPNP KAKEEEYVNG IGLSYDEYMI IKSFKPSKRQ FLIKRQDEKV ICTLDLSSLG NENLKILSTG TAHIDTIEKI FSQENKSLDE KVLELKEFYK NS // ID H7THQ1_CAMCO Unreviewed; 95 AA. AC H7THQ1; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=cco5_02537; OS Campylobacter coli 132-6. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887282; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=132-6; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AINA01000014; EIA76723.1; -; Genomic_DNA. DR EnsemblBacteria; EIA76723; EIA76723; cco5_02537. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 95 AA; 11054 MW; F0C02E71D53347AB CRC64; MEELQRIDIY SALNKPNLIF GADRELILMV GVISFALIFT GATLLTSIIG IFLFFFCNML LRLMAKSDPL MRQIFLRQIK YKKFYYAQST PFSKD // ID H7UKT1_CAMCO Unreviewed; 922 AA. AC H7UKT1; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 16-APR-2014, entry version 5. DE SubName: Full=Cmgb3/4; GN ORFNames=cco69_07598; OS Campylobacter coli 202/04. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887299; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=202/04; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AINH01000031; EIA84261.1; -; Genomic_DNA. DR EnsemblBacteria; EIA84261; EIA84261; cco69_07598. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 922 AA; 106340 MW; E02A8427F976F8DA CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGS IILVAFYSQN IFLVGFSIPV FFIMKAMTKK DDFIFRLMFL KMRFFSNPAS KNYYKAKTYS TNSYRQMPPN SNFPKISVFA LNAEPNFEKL IPFSSLINDS VVITKDYLLM TTWEIGGISF EAEDDDELDI KNDLLNMLFK SFANEPVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLRKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSK QLEFYNYLLG GKFNPIRVLP SPIDQYLNGN LQNIQFGHDT IQFNQNDSTK RFARCIEIKD YTNETFAGIL DILMYLDVEY TITQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVEQID EALDQLTNGE ISFGKYHFSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN FSSLIALHNF SMGKRDKNCW GDAVTILKTP NKQPYYFNFH QSSGVNKNDF GKFFLANTLI LGQSSGGKTV FMNFIVDQMM KYASKDTFPD DIPEDKRKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVEST QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDN LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSLEDFLK LKNAATLIEQ SSIMVFLSNP KAKEEEYVKG VGLSYDEYMI IKGFNPVKRQ FLIKRQDEKV ICTLDLSPLG NENLKILSTE TAYIDVIEKI FSQENKSLDE KVLELKEFYK NS // ID H7UM52_CAMCO Unreviewed; 102 AA. AC H7UM52; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Conjugal transfer protein TrbD; DE Flags: Fragment; GN ORFNames=cco7_00818; OS Campylobacter coli 67-8. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887284; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=67-8; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AINI01000004; EIA88824.1; -; Genomic_DNA. DR EnsemblBacteria; EIA88824; EIA88824; cco7_00818. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; FT NON_TER 1 1 SQ SEQUENCE 102 AA; 11916 MW; 847BD77CDF48D272 CRC64; NKWSINLMEE FQKIDIYSAL NKPNLIFGAD RELILMVGVI SFALIFTGAT LLTSIIGIFL FFFCNMLLRL MAKSDPLMRQ IFLRQIKYKK FYYAQSTPFS KD // ID H7UTV5_CAMCO Unreviewed; 511 AA. AC H7UTV5; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 19-FEB-2014, entry version 4. DE SubName: Full=Uncharacterized protein; DE Flags: Fragment; GN ORFNames=cco71_04672; OS Campylobacter coli 317/04. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887300; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=317/04; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AINJ01000013; EIA91469.1; -; Genomic_DNA. DR EnsemblBacteria; EIA91469; EIA91469; cco71_04672. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; FT NON_TER 511 511 SQ SEQUENCE 511 AA; 58799 MW; 5D837D9B623E2C4A CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGS IILVAFYSQN IFLVGFSIPV FFIMKAMTKK DDFIFRLMFL KMRFFSNPAS KNYHKVKTYS TNSYRQMPPN SNFPKISVFG LNAEPNFEKL IPFSSLINDS VVITKDYFLM TTWEIGGISF EAEEDDELDI KNDLLNMLFK SFANESVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLRKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSE QLEFYNYLLG GKFNPIRVLP SPIDQYLNGN LQNIQFGHDT LQLNSNDGTK RFARCIEIKD YTNETFAGIL NILMYLDVEY TITQSFSPIP KIDAKSAISK QKKQLIATED DGFSQVEQID EALDQLTNGE ISFGKYHFSI LVYGNTIKEA KDNANRVITE MNGLGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN YSSLIALHNF SMGKRDKNCW G // ID H7V6V6_CAMCO Unreviewed; 922 AA. AC H7V6V6; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 16-APR-2014, entry version 5. DE SubName: Full=Cmgb3/4; GN ORFNames=cco75_08661; OS Campylobacter coli LMG 9854. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887302; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=LMG 9854; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AINL01000068; EIA90053.1; -; Genomic_DNA. DR EnsemblBacteria; EIA90053; EIA90053; cco75_08661. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 922 AA; 106083 MW; C0E40DCAEAE37EBA CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGS IILVAFYSQN IFLVGFSIPV FFIMKAMTKK DDFIFRLMFL KMRFFSNPAS KNYYKAKTYS TNSYRQMPPN SNFPKISVFG LNAEPNFEKL IPFSSLINDS VVITKDYLLM TTWEIGGISF EAEDDDELDI KNDLLNMLFK SFANEPVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLKKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSK QLEFYNYLLG GKFNPIRVLP SPIDQYLNGN LQNIQFGHDT IQFNQNDSTK RFARCIEIKD YTNETFAGIL DILMYLDVEY TITQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVEQID EALDQLTNGE ISFGKYHFSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN FSSLIALHNF SMGKRDKNCW GDAVSILKTP NKQPYYFNFH QSSGVNKNDF GELFLANTLI LGQSGGGKTV FMNFIVDQMM KYASKDTFPD DIPEENRKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVENT QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDN LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSVEDFLK LKNAATLIEQ SATMVFLPNP KAKEEEYVNG IGLSYDEYMI IKGFNPAKRQ FLIKRQDEKV ICTLDLSSLG SENLKILSTG TAHIDTIEKI FSQENKSLDE KVLELREFYK NS // ID H7V730_CAMCO Unreviewed; 100 AA. AC H7V730; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=cco75_09039; OS Campylobacter coli LMG 9854. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887302; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=LMG 9854; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AINL01000085; EIA89537.1; -; Genomic_DNA. DR EnsemblBacteria; EIA89537; EIA89537; cco75_09039. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 100 AA; 11685 MW; 9BABBB8F2232FC07 CRC64; MEELQMEELQ RIDIYSALNK PNLIFGADRE LILMVGVISF ALIFTGATLL TSIIGIFLFF FCNMLLRLMA KSDPLMRQIF LRQIKYKKFY YAQSTPFSKD // ID H7VS04_CAMCO Unreviewed; 922 AA. AC H7VS04; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 16-APR-2014, entry version 6. DE SubName: Full=Uncharacterized protein; GN ORFNames=cco79_08930; OS Campylobacter coli LMG 23344. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887306; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=LMG 23344; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AINP01000099; EIB01369.1; -; Genomic_DNA. DR EnsemblBacteria; EIB01369; EIB01369; cco79_08930. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 922 AA; 106268 MW; 7B6A8228243F464B CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGC IILIAFYSQN IFLVGFSIPV FFIMKAMTKR DDFIFRLMFL KMRFFSNPAS KNYHKVKTYS TNSYRQMPPN SNFPKISVFG LNAEPNFEKL IPFSSLINDS VVITKDYLLM TTWEIGGISF EAEDDDELDI KNDLLNMLFK SFANEPVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLRKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSK QLEFYNYLLG GKFNPIRVLP SPIDQYLNGN LQNIQFGHDT IQFNQNDSTK RFARCIEIKD YTNETFAGIL DILMYLDVEY TITQSFSPIP KIDAKSAISK QKKQLIATED DGFSQVEQID EALDQLTNGE ISFGKYHFSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN YSSLIALHNF SIGKRDKNCW GDAVSILKTP NKQPYYFNFH QSSGVNKNDF GKFFLANTLI LGQSSGGKTV FMNFIVDQMM KYASKDTFPD DIPEDKRKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVEST QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDN LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSLEDFLK LKNAATLIEQ SSTMVFLSNP KAKEEEYVKG VGLSYDEYMI VKGFNPAKRQ FLIKRQDEKV ICTLDLSPLG NENLKILSTE TAYIDVIEKI FSQENKSLDE KVLELKEIYK NS // ID H7W012_CAMCO Unreviewed; 95 AA. AC H7W012; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=cco81_03969; OS Campylobacter coli LMG 9853. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887307; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=LMG 9853; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AINR01000018; EIB01378.1; -; Genomic_DNA. DR EnsemblBacteria; EIB01378; EIB01378; cco81_03969. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 95 AA; 11036 MW; 0B20330D0E943B70 CRC64; MEELKRIDIY SALNKPNLIF GADRELILIV GVISFALIFT GATLLTSIIG IFLFFFCNML LRLMAKSDPL MRQIFLRQIK YKKFYYAQST PFSKD // ID H7W5N7_CAMCO Unreviewed; 922 AA. AC H7W5N7; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 16-APR-2014, entry version 5. DE SubName: Full=Cmgb3/4; GN ORFNames=cco88_05669; OS Campylobacter coli LMG 9860. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887308; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=LMG 9860; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AINS01000038; EIB07869.1; -; Genomic_DNA. DR EnsemblBacteria; EIB07869; EIB07869; cco88_05669. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 922 AA; 106201 MW; 120D2695F9B3C3C5 CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGC IILIAFYSQN IFLVGFSIPV FFIMKAMTKK DDFIFRLMFL KMRFFSNPAS KNYHKVKTYS TNSYRQMPPN SNFPKISVFG LNAEPNFEKL IPFSSLINDS VVITKDYLLM TTWEIGGISF EAEDDDELDI KNDLLNMLFK SFANEPVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLRKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSK QLEFYNYLLG GKFNPIRVLP SPIDQYLNGN LQNIQFGHDT IQFNQNDSTK RFARCIEIKD YTNETFAGIL DILMYLDVEY TITQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVAQID EALDQLTNGE ISFGKYHLSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN YSSLIALHNF SMGKRDKNCW GDAVSILKTP NKQPYYFNFH QSSGANKNDF GKFFLANTLI LGQSSGGKTV FMNFIVDQMM KYASKDTFPD DIPEDKRKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVEST QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDS LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSLEDFLK LKNAATLIEQ SSTMVFLSNP KAKEEEYVKG VGLSYDEYMI IKGFNPVKRQ FLIKRQDEKV ICTLDLSPLG NENLKILSTE TAYIDVIEKI FSQENKSLDE KVLELKEFYK NS // ID H7W7P2_CAMCO Unreviewed; 95 AA. AC H7W7P2; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=cco88_09297; OS Campylobacter coli LMG 9860. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887308; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=LMG 9860; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AINS01000092; EIB05680.1; -; Genomic_DNA. DR EnsemblBacteria; EIB05680; EIB05680; cco88_09297. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 95 AA; 10856 MW; A6067037D6080B82 CRC64; MEELQKIDIY SALNKPNLIF GADRELMLIT GLISFALIFT GATLITSVIG IALFFVCGLL LRLMAKSDPL MRQIFIRQNK YKKFYYPQST PFSKD // ID H7WD15_CAMCO Unreviewed; 95 AA. AC H7WD15; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=cco91_08404; OS Campylobacter coli H6. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887309; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=H6; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AINT01000080; EIB04936.1; -; Genomic_DNA. DR EnsemblBacteria; EIB04936; EIB04936; cco91_08404. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 95 AA; 11054 MW; F0C02E71D53347AB CRC64; MEELQRIDIY SALNKPNLIF GADRELILMV GVISFALIFT GATLLTSIIG IFLFFFCNML LRLMAKSDPL MRQIFLRQIK YKKFYYAQST PFSKD // ID H7WEZ3_CAMCO Unreviewed; 922 AA. AC H7WEZ3; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 16-APR-2014, entry version 6. DE SubName: Full=Uncharacterized protein; GN ORFNames=cco93_02958; OS Campylobacter coli H8. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887310; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=H8; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AINU01000013; EIB11410.1; -; Genomic_DNA. DR EnsemblBacteria; EIB11410; EIB11410; cco93_02958. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 922 AA; 106318 MW; 0B764F45EF93E927 CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGC IILIAFYSQN IFLVGFSIPV FFIMKAMTKR DDFIFRLMFL KMRFFSNPAS KNYHKVKTYS TNSYRQMPPN SNFPKISVFG LNAEPNFEKL IPFSSLINDS VVITKDYFLM TTWEIGGISF EAEEDDELDI KNDLLNMLFK SFANEPVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLRKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSK QLEFYNYLLG GKFNPIRVLP SPIDQYLNGN LQNIQFGHDT IQFNQNDSTK RFARCIEIKD YTNETFAGIL DILMYLDVEY TITQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVAQID EALDQLTNGE ISFGKYHLSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN YSSLIALHNF SMGKRDKNCW GDAVSILKTP NKQPYYFNFH QSSGANKNDF GKFFLANTLI LGQSSGGKTV FMNFIVDQMM KYASKDTFPD DIPEDKRKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVEST QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDN LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSLEDFLK LKNAATLIEQ SSTMVFLSNP KAKEEEYVKG VGLSYDEYMI IKGFNPVKRQ FLIKRQDEKV ICTLDLSPLG NENLKILSTE TAYIDIIEKI FSQENKSLDE KVLELKEFYK NS // ID H7WLF5_CAMCO Unreviewed; 95 AA. AC H7WLF5; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=cco94_04642; OS Campylobacter coli H9. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887311; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=H9; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AINV01000021; EIB10681.1; -; Genomic_DNA. DR EnsemblBacteria; EIB10681; EIB10681; cco94_04642. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 95 AA; 10856 MW; A6067037D6080B82 CRC64; MEELQKIDIY SALNKPNLIF GADRELMLIT GLISFALIFT GATLITSVIG IALFFVCGLL LRLMAKSDPL MRQIFIRQNK YKKFYYPQST PFSKD // ID H7WTP6_CAMCO Unreviewed; 95 AA. AC H7WTP6; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=cco96_09236; OS Campylobacter coli H56. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=887312; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=H56; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AINW01000087; EIB10751.1; -; Genomic_DNA. DR EnsemblBacteria; EIB10751; EIB10751; cco96_09236. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 95 AA; 11054 MW; F0C02E71D53347AB CRC64; MEELQRIDIY SALNKPNLIF GADRELILMV GVISFALIFT GATLLTSIIG IFLFFFCNML LRLMAKSDPL MRQIFLRQIK YKKFYYAQST PFSKD // ID H7X2P4_CAMJU Unreviewed; 922 AA. AC H7X2P4; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 16-APR-2014, entry version 6. DE SubName: Full=Uncharacterized protein; GN ORFNames=cje1_06685; OS Campylobacter jejuni subsp. jejuni 129-258. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=889213; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=129-258; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AINY01000047; EIB15109.1; -; Genomic_DNA. DR EnsemblBacteria; EIB15109; EIB15109; cje1_06685. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 922 AA; 106222 MW; 3B099768A674FB3A CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGC IILIAFYSQN IFLVGFSIPV FFIMKAMTKR DDFIFRLMFL KMRFFSNPAS KNYHKVKTYS TNSYRQMPPN SNFPKISVFG LNAEPNFEKL IPFSSLINDS VVITKDYLLM TTWEIGGISF EAEDDDELDI KNDLLNMLFK SFANEPVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLRKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSK QLEFYNYLLG GKFNPIRVLP SPIEQYLNGN LQNIQFGHDT IQFNQNDSTK RFARCIEIKD YTNETFAGIL DILMYLDVEY TITQSFSPIP KIDAKSAISK QKKQLIATED DGFSQVAQID EALDQLTNGE ISFGKYHLSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN YSSLIALHNF SMGKRDKNCW GDAVSILKTP NKQPYYFNFH QSSGANKNDF GKFFLANTLI LGQSSGGKTV FMNFIVDQMM KYASKDTFPD DIPEDKRKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVEST QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDN LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSLEDFLK LKNAATLIEQ SSTMVFLSNP KAKEEEYVKG VGLSYDEYMI IKGFNPVKRQ FLIKRQDEKV ICTLDLSPLG NENLKILSTE TAYIDVIEKI FSQENKSLDE KVLELKEIYK NS // ID H7X5D2_CAMJU Unreviewed; 922 AA. AC H7X5D2; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 16-APR-2014, entry version 6. DE SubName: Full=Uncharacterized protein; GN ORFNames=cje10_02961; OS Campylobacter jejuni subsp. jejuni 51494. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=889216; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=51494; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AINZ01000012; EIB22515.1; -; Genomic_DNA. DR EnsemblBacteria; EIB22515; EIB22515; cje10_02961. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 922 AA; 106209 MW; B0733ECB00245125 CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGC IILIAFYSQN IFLVGFSIPV FFIMKAMTKR DDFIFRLMFL KMRFFSNPAS KNYHKVKTYS TNSYRQMPPN SNFPKISVFG LNAEPNFEKL IPFSSLINDS VVITKDYLLM TTWEIGGISF EAEDDDELDI KNDLLNMLFK SFANEPVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLRKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSK QLEFYNYLLG GKFNPIRVLS SPIDQYLNGN LQNIQFGHDT IQFNQNDSTK KFARCIEIKD YTNETFAGIL DILMYLDVEY TITQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVEQID EALDQLTNGE ISFGKYYFSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN YSSLIALHNF SMGKRDKNCW GDAVSILKTP NKQPYYFNFH QSSGANKNDF GELFLANTLI LGQSGGGKTV FMNFIVDQMM KYASKDTFPD DIPEENRKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVEST QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDN LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSVEDFLK LKNATTLIEQ SATMVFLPNP KAKEEEYVNG IGLSYDEYMI IKSFKPSKRQ FLIKRQDEKV ICTLDLSSLG NENLKILSTG TAHIDTIEKI FSQENKSLDE KVLELKEFYK NS // ID H7XFE2_CAMJU Unreviewed; 922 AA. AC H7XFE2; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 16-APR-2014, entry version 6. DE SubName: Full=Cmgb3/4; GN ORFNames=cje102_02717; OS Campylobacter jejuni subsp. jejuni LMG 23218. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=889240; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=LMG 23218; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIOB01000009; EIB20826.1; -; Genomic_DNA. DR ProteinModelPortal; H7XFE2; -. DR EnsemblBacteria; EIB20826; EIB20826; cje102_02717. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 922 AA; 106331 MW; 5C46272226AE23BA CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGC IILIAFYSQN IFLVGFSIPV FFIMKAMTKK DDFIFRLMFL KMRFFSNPAS KNYYKAKTYS TNSYRQMPPN SNFPKISVFA LNAEPNFEKL IPFSSLINDS VVITKDYLLM TTWEIGGISF EAEDDDELDI KNDLLNMLFK SFANEPVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLRKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSK QLEFYNYLLG GKFNPIRVLP SPIDQYLNGN LQNIQFGHDT IQFNQNDSTK RFARCIEIKD YTNETFAGIL DILMYLDVEY TITQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVEQID EALDQLTNGE ISFGKYHFSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN FSSLIALHNF SMGKRDKNCW GDAVTILKTP NKQPYYFNFH QSSGVNKNDF GKFFLANTLI LGQSSGGKTV FMNFIVDQMM KYASKDTFPD DIPEDKRKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVEST QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDS LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSLEDFLK LKNAATLIEQ SSTMVFLSNP KAKEEEYVKG VGLSYDEYMI IKGFNPVKRQ FLIKRQDEKV ICTLDLSPLG NENLKILSTE TAYIDVIEKI FSQENKSLDE KVLELKEFYK NS // ID H7ZWF6_CAMJU Unreviewed; 922 AA. AC H7ZWF6; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 16-APR-2014, entry version 5. DE SubName: Full=Cmgb3/4; GN ORFNames=cje154_05851; OS Campylobacter jejuni subsp. jejuni 2008-988. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=889253; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=2008-988; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIOS01000044; EIB53660.1; -; Genomic_DNA. DR EnsemblBacteria; EIB53660; EIB53660; cje154_05851. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 922 AA; 106301 MW; 759EE8EE1170F30D CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGS IILVAFYSQN IFLVGFSIPV FFIMKAMTKK DDFIFRLMFL KMRFFSNPAS KNYYKAKTYS TNSYRQMPPN SNFPKISVFA LNAEPNFEKL IPFSSLINDS VVITKDYLLM TTWEIGGISF EAEDDDELDI KNDLLNMLFK SFANEPVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLRKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSK QLEFYNYLLG GKFNPIRVLP SPIDQYLNGN LQNIQFGHDT IQFNQNDSTK RFARCIEIKD YTNETFAGIL DILMYLDVEY TITQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVEQID EALDQLTNGE ISFGKYHFSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN FSSLIALHNF SMGKRDKNCW GDAVTILKTP NKQPYYFNFH QSSGVNKNDF GKFFLANTLI LGQSSGGKTV FMNFIVDQMM KYASKDTFPD DIPEDKRKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVEST QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDS LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSLEDFLK LKNAATLIEQ SSTMVFLSNP KAKEEEYVKG VGLSYDEYMI IKGFNPVKRQ FLIKRQDEKV ICTLDLSPLG NENLKILSTE TAYIDVIEKI FSQENKSLDE KVLELKEFYK NS // ID H8AMQ8_CAMJU Unreviewed; 95 AA. AC H8AMQ8; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Conjugal transfer protein TrbD; GN ORFNames=cje21_05787; OS Campylobacter jejuni subsp. jejuni 1997-7. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=889223; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=1997-7; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIOX01000031; EIB59306.1; -; Genomic_DNA. DR EnsemblBacteria; EIB59306; EIB59306; cje21_05787. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 95 AA; 10879 MW; 4436CC412663EC1E CRC64; MEELHRVDIY SALNKPNLML GADRELIMMT GLISASLIFT GATIVTTIVG VVLFFICSLL LRLMAKSDPL MRQIFIRQNK YKKFYYPQST PFSKD // ID H8ATX5_CAMJU Unreviewed; 922 AA. AC H8ATX5; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 16-APR-2014, entry version 6. DE SubName: Full=Uncharacterized protein; GN ORFNames=cje22_09599; OS Campylobacter jejuni subsp. jejuni 1997-10. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=889224; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=1997-10; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIOY01000120; EIB60163.1; -; Genomic_DNA. DR EnsemblBacteria; EIB60163; EIB60163; cje22_09599. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 922 AA; 106183 MW; 8FD8537DDB49E7F8 CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGC IILIAFYSQN IFLVGFSIPV FFIMKAMTKR DDFIFRLMFL KMRFFSNPAS KNYHKVKTYS TNSYRQMPPN SNFPKISVFG LNAEPNFEKL IPFSSLINDS VVITKDYLLM TTWEIGGISF EAEDDDELDI KNDLLNMLFK SFANEPVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLRKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSK QLEFYNYLLG GKFNPIRVLS SPIDQYLNGN LQNIQFGHDT IQFNQNDSTK KFARCIEIKD YTNETFAGIL DILMYLDVEY TITQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVEQID EALDQLTNGE ISFGKYHFSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN YSSLIALHNF SMGKRDKNCW GDAVSILKTP NKQPYYFNFH QSSGANKNDF GELFLANTLI LGQSGGGKTV FMNFIVDQMM KYASKDTFPD DIPEENRKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVEST QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDN LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSVEDFLK LKNATTLIEQ SATMVFLPNP KAKEEEYVNG IGLSYDEYMI IKSFKPSKRQ FLIKRQDEKV ICTLDLSSLG NENLKILSTG TAHIDTIEKI FSQENKSLDE KVLELKEFYK NS // ID H8CXE9_CAMJU Unreviewed; 922 AA. AC H8CXE9; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 16-APR-2014, entry version 6. DE SubName: Full=Uncharacterized protein; GN ORFNames=cje95_05748; OS Campylobacter jejuni subsp. jejuni LMG 23210. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=889237; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=LMG 23210; RA Richards V., Lefebure T., Suzuki H., Pavinski Bitar P., Stanhope M.; RL Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AIPN01000029; EIB90518.1; -; Genomic_DNA. DR EnsemblBacteria; EIB90518; EIB90518; cje95_05748. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; SQ SEQUENCE 922 AA; 106184 MW; 3BB78F2C6009D534 CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGC IILIAFYSQN IFLVGFSIPV FFIMKAMTKK DDFIFRLMFL KMRFLSNPAS KNYHKVKTYS TNSYRQMPPN SNFPKISVFG LNAEPSFEKL IPFSSLINDF VVITKDYFLM TTWEIGGISF EAEEDDELDI KNDLLNMLFK SFSNESVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLRKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TINLFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSE QLEFYNYLIS GKFNPIRVLP SPIDQYLNGN LQNIQFGHDT IQFNQNDSTK RFARCIEIKD YTNETFAGIL DILMYLDVEY TITQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVAQID EALDQLTNGE ISFGKYHFSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN FSSLIALHNF SMGKRDKNCW GDAVSILKTP NKQPYYFNFH QSSGVNKNDF GELFLANTLI LGQSGGGKTV FMNFIVDQMM KYASKDTFPD DIPEENKKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVEST QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDN LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSVEDFLK LKNATTLIEQ SATMVFLPNP KAKEEEYVKG VGLSYDEYMI IKGFNPAKRQ FLIKRQDEKV ICTLDLSSLG NENLKILSTG TAHIDTIEKI FSQENKSLDE KVLELKEFYK NS // ID H8FI62_XANCI Unreviewed; 89 AA. AC H8FI62; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 19-FEB-2014, entry version 5. DE SubName: Full=Conjugal transfer TrbD transmembrane protein; GN Name=trbD; ORFNames=XMIN_3040; OS Xanthomonas citri pv. mangiferaeindicae LMG 941. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=1156940; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=LMG 941; RA Midha S., Ranjan M., Sharma V., Pinnaka A.K., Patil P.B.; RT "Genome Sequence of Xanthomonas citri pv. mangiferaeindicae Strain LMG RT 941."; RL J. Bacteriol. 194:3031-3031(2012). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=LMG 941; RA Patil P.; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAHO01000038; CCG38049.1; -; Genomic_DNA. DR EnsemblBacteria; CCG38049; CCG38049; XMIN_3040. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Membrane; Transmembrane. SQ SEQUENCE 89 AA; 9529 MW; B818F5238375747B CRC64; MSTASDLPGF EVPLHRSLTE PILMGGAPRT VAIANGTLAA AVGLGLQLWI PGLVLWLVGH SLAVWGARVD PQFMQVFARH IKHKPLLDV // ID H8FL05_XANCI Unreviewed; 51 AA. AC H8FL05; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Uncharacterized protein; GN ORFNames=XMIN_4034; OS Xanthomonas citri pv. mangiferaeindicae LMG 941. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=1156940; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=LMG 941; RA Midha S., Ranjan M., Sharma V., Pinnaka A.K., Patil P.B.; RT "Genome Sequence of Xanthomonas citri pv. mangiferaeindicae Strain LMG RT 941."; RL J. Bacteriol. 194:3031-3031(2012). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=LMG 941; RA Patil P.; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAHO01000073; CCG39042.1; -; Genomic_DNA. DR EnsemblBacteria; CCG39042; CCG39042; XMIN_4034. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 51 AA; 5968 MW; 94B9F41FCB4F78F4 CRC64; MAAALIFGLQ SWWSLPLYLV IHIGLVLMTK YDTQWPAALR RALRLKNHYR A // ID H8FM29_XANCI Unreviewed; 99 AA. AC H8FM29; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 03-APR-2013, entry version 3. DE SubName: Full=Type IV secretory pathway, VirB3-like family protein; GN Name=virB3; ORFNames=XMIN_4409; OS Xanthomonas citri pv. mangiferaeindicae LMG 941. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=1156940; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=LMG 941; RA Midha S., Ranjan M., Sharma V., Pinnaka A.K., Patil P.B.; RT "Genome Sequence of Xanthomonas citri pv. mangiferaeindicae Strain LMG RT 941."; RL J. Bacteriol. 194:3031-3031(2012). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=LMG 941; RA Patil P.; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAHO01000110; CCG39416.1; -; Genomic_DNA. DR EnsemblBacteria; CCG39416; CCG39416; XMIN_4409. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 99 AA; 11005 MW; 0B84524E2EFB780D CRC64; MSADEQFHDE GESLVAAMTR PTMVGGLTLA SLAMSFYFPG MAALITRSLW AAALIPVLLL ISYLVCLKDV YLFDIMSAAT HLKTCPNKRF WGCRRYAPR // ID H8FXW9_PHAMO Unreviewed; 89 AA. AC H8FXW9; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 11-DEC-2013, entry version 5. DE SubName: Full=Conjugal transfer protein; GN ORFNames=PHAMO_70011; OS Phaeospirillum molischianum DSM 120. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Rhodospirillaceae; Phaeospirillum. OX NCBI_TaxID=1150626; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=DSM 120; RX PubMed=22689244; DOI=10.1128/JB.00605-12; RA Duquesne K., Prima V., Ji B., Rouy Z., Medigue C., Talla E., RA Sturgis J.N.; RT "Draft Genome Sequence of the Purple Photosynthetic Bacterium RT Phaeospirillum molischianum DSM120, a Particularly Versatile RT Bacterium."; RL J. Bacteriol. 194:3559-3560(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CAHP01000059; CCG43207.1; -; Genomic_DNA. DR EnsemblBacteria; CCG43207; CCG43207; PHAMO_70011. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 89 AA; 9483 MW; 8790960C3E8F3A32 CRC64; MAGADPIDGF SVPVHRALTE PILLGGAPRT VAIANGTLAA AIALGLRLWI PGLVLWLLGH AAAVWAAKHD AQFVEVVRRH LRYPAYLRA // ID H8K407_RICAG Unreviewed; 95 AA. AC H8K407; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 29-MAY-2013, entry version 6. DE SubName: Full=Type IV secretion system protein VirB3; GN OrderedLocusNames=MCE_01180; OS Rickettsia amblyommii (strain GAT-30V). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=1105111; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=GAT-30V; RA Johnson S.L., Munk A.C., Han S., Bruce D.C., Dasch G.A.; RT "Complete genome sequence of Candidatus Rickettsia amblyommii strain RT GAT-30V."; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003334; AFC69251.1; -; Genomic_DNA. DR RefSeq; YP_005364883.1; NC_017028.1. DR EnsemblBacteria; AFC69251; AFC69251; MCE_01180. DR GeneID; 11963402; -. DR KEGG; ram:MCE_01180; -. DR KO; K03198; -. DR BioCyc; RAMB1105111:GLAJ-195-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10784 MW; 7AF162673CBA7772 CRC64; MAGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAALHFVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID H8K9X9_RICAC Unreviewed; 95 AA. AC H8K9X9; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 29-MAY-2013, entry version 6. DE SubName: Full=Type IV secretion system protein VirB3; GN OrderedLocusNames=MC5_00080; OS Rickettsia australis (strain Cutlack). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=1105110; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Cutlack; RA Johnson S.L., Munk A.C., Han S., Bruce D.C., Dasch G.A.; RT "Complete genome sequence of Rickettsia australis strain Cutlack."; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003338; AFC70467.1; -; Genomic_DNA. DR RefSeq; YP_005414310.1; NC_017058.1. DR EnsemblBacteria; AFC70467; AFC70467; MC5_00080. DR GeneID; 12017396; -. DR KEGG; rau:MC5_00080; -. DR KO; K03198; -. DR BioCyc; RAUS1105110:GLJ8-17-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10766 MW; 45CD99995CA9456F CRC64; MSGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID H8KBT8_RICMS Unreviewed; 95 AA. AC H8KBT8; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 14-MAY-2014, entry version 8. DE SubName: Full=Type IV secretion system protein VirB3; GN OrderedLocusNames=MCI_04900; OS Rickettsia montanensis (strain OSU 85-930). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=1105114; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=OSU 85-930; RA Johnson S.L., Munk A.C., Han S., Bruce D.C., Dasch G.A.; RT "Complete genome sequence of Rickettsia montanensis strain OSU 85- RT 930."; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003340; AFC73804.1; -; Genomic_DNA. DR RefSeq; YP_005391863.1; NC_017043.1. DR EnsemblBacteria; AFC73804; AFC73804; MCI_04900. DR GeneID; 11994021; -. DR KEGG; rmo:MCI_04900; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR BioCyc; RMON1105114:GLJA-853-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10718 MW; 7243F0672CAA777C CRC64; MAGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIVILFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID H8KEI6_RICPT Unreviewed; 95 AA. AC H8KEI6; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 14-MAY-2014, entry version 8. DE SubName: Full=Type IV secretion system protein VirB3; GN OrderedLocusNames=MC1_00790; OS Rickettsia parkeri (strain Portsmouth). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=1105108; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Portsmouth; RA Johnson S.L., Munk A.C., Han S., Bruce D.C., Dasch G.A.; RT "Complete genome sequence of Rickettsia parkeri strain Portsmouth."; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003341; AFC74336.1; -; Genomic_DNA. DR RefSeq; YP_005392395.1; NC_017044.1. DR EnsemblBacteria; AFC74336; AFC74336; MC1_00790. DR GeneID; 11995709; -. DR KEGG; rpp:MC1_00790; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR BioCyc; RPAR1105108:GLJB-145-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10720 MW; 089951DB30BA6369 CRC64; MAGALASDPL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMVLFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID H8KHX7_RICR3 Unreviewed; 95 AA. AC H8KHX7; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 29-MAY-2013, entry version 6. DE SubName: Full=Type IV secretion system protein VirB3; GN OrderedLocusNames=MCC_01330; OS Rickettsia rhipicephali (strain 3-7-female6-CWPP). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=1105113; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=3-7-female6-CWPP; RA Johnson S.L., Munk A.C., Han S., Bruce D.C., Dasch G.A.; RT "Complete genome sequence of Rickettsia rhipicephali strain 3-7- RT female6-CWPP."; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003342; AFC71923.1; -; Genomic_DNA. DR RefSeq; YP_005389996.1; NC_017042.1. DR EnsemblBacteria; AFC71923; AFC71923; MCC_01330. DR GeneID; 11992096; -. DR KEGG; rre:MCC_01330; -. DR KO; K03198; -. DR BioCyc; RRHI1105113:GLJK-218-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10835 MW; 15269E8D69B84135 CRC64; MVGTLASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTN QCPNKFYYGA NSYNI // ID H8LLL5_RICSL Unreviewed; 95 AA. AC H8LLL5; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 22-JAN-2014, entry version 7. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=MC3_00820; OS Rickettsia slovaca str. D-CWPP. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=1105109; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=D-CWPP; RA Johnson S.L., Munk A.C., Han S., Bruce D.C., Dasch G.A.; RL Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003375; AFD19150.1; -; Genomic_DNA. DR RefSeq; YP_005425881.1; NC_017065.1. DR EnsemblBacteria; AFD19150; AFD19150; MC3_00820. DR GeneID; 12021887; -. DR KEGG; rsw:MC3_00820; -. DR KO; K03198; -. DR BioCyc; RSLO1105109:GLJL-144-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10750 MW; 7253E0673CBA777C CRC64; MAGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID H8N2L5_RICPO Unreviewed; 95 AA. AC H8N2L5; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 22-JAN-2014, entry version 7. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=M9W_00485; OS Rickettsia prowazekii str. Chernikova. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; typhus group. OX NCBI_TaxID=1105094; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Chernikova; RA Johnson S.L., Munk A.C., Han S., Bruce D.C., Dasch G.A.; RL Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003391; AFE48926.1; -; Genomic_DNA. DR RefSeq; YP_005405204.1; NC_017049.1. DR EnsemblBacteria; AFE48926; AFE48926; M9W_00485. DR GeneID; 12007851; -. DR KEGG; rpw:M9W_00485; -. DR KO; K03198; -. DR BioCyc; RPRO1105094:GLJE-97-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10786 MW; 5F0C444AFE267B3E CRC64; MSGTLASDLL FVGLTRPTMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AGALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID H8N678_RICPO Unreviewed; 95 AA. AC H8N678; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 22-JAN-2014, entry version 7. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=M9Y_00485; OS Rickettsia prowazekii str. Katsinyian. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; typhus group. OX NCBI_TaxID=1105095; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Katsinyian; RA Johnson S.L., Sims D., Han S., Bruce D.C., Dasch G.A.; RL Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003392; AFE49771.1; -; Genomic_DNA. DR RefSeq; YP_005406049.1; NC_017050.1. DR EnsemblBacteria; AFE49771; AFE49771; M9Y_00485. DR GeneID; 12009408; -. DR KEGG; rps:M9Y_00485; -. DR KO; K03198; -. DR BioCyc; RPRO1105095:GLJH-97-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10786 MW; 5F0C444AFE267B3E CRC64; MSGTLASDLL FVGLTRPTMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AGALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID H8N8H1_RICPO Unreviewed; 95 AA. AC H8N8H1; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 22-JAN-2014, entry version 7. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=MA1_00485; OS Rickettsia prowazekii str. BuV67-CWPP. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; typhus group. OX NCBI_TaxID=1105096; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=BuV67-CWPP; RA Johnson S.L., Sims D., Han S., Bruce D.C., Dasch G.A.; RL Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003393; AFE50615.1; -; Genomic_DNA. DR RefSeq; YP_005412710.1; NC_017056.1. DR EnsemblBacteria; AFE50615; AFE50615; MA1_00485. DR GeneID; 12015606; -. DR KEGG; rpo:MA1_00485; -. DR KO; K03198; -. DR BioCyc; RPRO1105096:GLJD-97-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10786 MW; 5F0C444AFE267B3E CRC64; MSGTLASDLL FVGLTRPTMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AGALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID H8N9Y0_RICPO Unreviewed; 95 AA. AC H8N9Y0; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 22-JAN-2014, entry version 7. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=MA3_00495; OS Rickettsia prowazekii str. Dachau. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; typhus group. OX NCBI_TaxID=1105097; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Dachau; RA Johnson S.L., Sims D., Han S., Bruce D.C., Dasch G.A.; RL Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003394; AFE51456.1; -; Genomic_DNA. DR RefSeq; YP_005406891.1; NC_017051.1. DR EnsemblBacteria; AFE51456; AFE51456; MA3_00495. DR GeneID; 12009612; -. DR KEGG; rpz:MA3_00495; -. DR KO; K03198; -. DR BioCyc; RPRO1105097:GLJF-95-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10786 MW; 5F0C444AFE267B3E CRC64; MSGTLASDLL FVGLTRPTMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AGALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID H8NDN8_RICPO Unreviewed; 95 AA. AC H8NDN8; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 22-JAN-2014, entry version 7. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=MA5_01855; OS Rickettsia prowazekii str. GvV257. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; typhus group. OX NCBI_TaxID=1105098; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=GvV257; RA Johnson S.L., Sims D., Han S., Bruce D.C., Dasch G.A.; RL Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003395; AFE52551.1; -; Genomic_DNA. DR RefSeq; YP_005404629.1; NC_017048.1. DR EnsemblBacteria; AFE52551; AFE52551; MA5_01855. DR GeneID; 12007252; -. DR KEGG; rpg:MA5_01855; -. DR KO; K03198; -. DR BioCyc; RPRO1105098:GLJG-364-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10814 MW; 5F0C5B45EE39742E CRC64; MSGTLASDLL FVGLTRPTMI FGVSIKFAVL NMIMTMIVFI WNNGIMILFI AGALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID H8NEI8_RICPO Unreviewed; 95 AA. AC H8NEI8; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 22-JAN-2014, entry version 7. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=MA7_00490; OS Rickettsia prowazekii str. RpGvF24. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; typhus group. OX NCBI_TaxID=1105099; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=RpGvF24; RA Johnson S.L., Sims D., Han S., Bruce D.C., Dasch G.A.; RL Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003396; AFE53122.1; -; Genomic_DNA. DR RefSeq; YP_005413549.1; NC_017057.1. DR EnsemblBacteria; AFE53122; AFE53122; MA7_00490. DR GeneID; 12016623; -. DR KEGG; rpv:MA7_00490; -. DR KO; K03198; -. DR BioCyc; RPRO1105099:GLJJ-93-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10814 MW; 5F0C5B45EE39742E CRC64; MSGTLASDLL FVGLTRPTMI FGVSIKFAVL NMIMTMIVFI WNNGIMILFI AGALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID H8NIS9_RICTP Unreviewed; 95 AA. AC H8NIS9; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 22-JAN-2014, entry version 7. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=RTTH1527_00160; OS Rickettsia typhi str. TH1527. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; typhus group. OX NCBI_TaxID=1003201; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=TH1527; RA Johnson S.L., Sims D., Han S., Bruce D.C., Dasch G.A.; RL Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003397; AFE53899.1; -; Genomic_DNA. DR RefSeq; YP_005427121.1; NC_017066.1. DR EnsemblBacteria; AFE53899; AFE53899; RTTH1527_00160. DR GeneID; 12022753; -. DR KEGG; rtt:RTTH1527_00160; -. DR KO; K03198; -. DR BioCyc; RTYP1003201:GLJN-34-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10782 MW; 5866E98AFE236A2A CRC64; MSGTLASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AGALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID H8NKL7_RICTP Unreviewed; 95 AA. AC H8NKL7; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 22-JAN-2014, entry version 7. DE SubName: Full=Type IV secretion system protein VirB3; GN ORFNames=RTB9991CWPP_00160; OS Rickettsia typhi str. B9991CWPP. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; typhus group. OX NCBI_TaxID=1003202; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=B9991CWPP; RA Johnson S.L., Sims D., Han S., Bruce D.C., Dasch G.A.; RL Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003398; AFE54737.1; -; Genomic_DNA. DR RefSeq; YP_005423359.1; NC_017062.1. DR EnsemblBacteria; AFE54737; AFE54737; RTB9991CWPP_00160. DR GeneID; 12063516; -. DR KEGG; rtb:RTB9991CWPP_00160; -. DR KO; K03198; -. DR BioCyc; RTYP1003202:GLJM-34-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10782 MW; 5866E98AFE236A2A CRC64; MSGTLASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AGALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID H8NTU7_RAHAQ Unreviewed; 915 AA. AC H8NTU7; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 16-APR-2014, entry version 9. DE SubName: Full=Putative conjugal transfer protein; GN ORFNames=Q7S_09545; OS Rahnella aquatilis HX2. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Rahnella. OX NCBI_TaxID=1151116; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=HX2; RX PubMed=23144397; DOI=10.1128/JB.01769-12; RA Guo Y., Jiao Z., Li L., Wu D., Crowley D.E., Wang Y., Wu W.; RT "Draft Genome Sequence of Rahnella aquatilis Strain HX2, a Plant RT Growth-Promoting Rhizobacterium Isolated from Vineyard Soil in RT Beijing, China."; RL J. Bacteriol. 194:6646-6647(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003403; AFE58143.1; -; Genomic_DNA. DR RefSeq; YP_005401710.1; NC_017047.1. DR EnsemblBacteria; AFE58143; AFE58143; Q7S_09545. DR GeneID; 12003610; -. DR KEGG; raa:Q7S_09545; -. DR KO; K03199; -. DR BioCyc; RAQU1151116:GLJ4-1919-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 915 AA; 103483 MW; DA33D1D41AE6D5FF CRC64; MATLNKALTR PAAIAGIPLV PFVMVSGAIV LLAVYVSYYL ILLLIPAWLE MKAKARTDIH YFGLLWLAFK TRGRFGTNKH FGANALLANR YDAVDVSEFI EKMKLNERVT LDKYIPYSSH MHPHVIRNRQ GDLVASWELE GTVFECEDEH HLTLMATHLN NVIRAYEGLP ITFYLHRIRE KYHDAFDANS GIPFSDEVTR LYYQPISEKP LWRHRLFFTV CYVPFSPLEK KAMKAQPSGK RKTALDDALK VMLEHRDALA SALSRYTATP LGMYEDNGRV YSAQLSFYHR LLTGQWQKVA VTRAPFYETL NTPDVFFTTD TAECQTVSGS RFLRSLEIKD YSPETATGLL DALLYAESEY VLTQSFTCMA RDEAQKHIRL AEKRLNSADD DAISQREELI VLRDLLQSGH VSCGKYHFSL LVSSDSAEQV VKDANALAQP FADLGIMTTL STLSLPAAYL AQLPGVYTLR PRLVAVSSQN FADLASLHNF HPHKRSGNPW GDAIAILKSP GGGGYYLNLH DSQSGRDDFN EKTPGNTAII GKTGSGKTML MTMMQQLMQK YRNPATFSES APLKQLTTVY FDKDRAAEMA IRQMGGRYFR IRTGVPTGFN PFALAPTRRN ISFIKRLVRM LCRRNGKPLD PRDEERISAA VDTIMLDYPP EYRKFGITRL LEVLPEPPTP DARLNGLRIR LKQWAQGGEF GWVFDNEEDT FNISNTDNVG IDGTEFLDDD DIRGPVTFYL LYRVTGLLDG RRLVMFMDEF WKWLADVEFS RFSLNMLKVI RKLNGIFVPA TQSPDEIVKH PIAPAIIEQC STQIFLANPK ASRADYVEKM KVPESVYDIV RNLDPGERSM VVLKTPLRAG ETRPFVAMAK MDLAGLGKLT KMLSGSEDNL KLFDTLYQEG MQPDDWKAAF LEQAL // ID H9AXR8_ECOLX Unreviewed; 917 AA. AC H9AXR8; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 16-APR-2014, entry version 7. DE SubName: Full=IncX type IV secretion system protein VirB4; GN Name=virB4; ORFNames=nmec31_25; OS Escherichia coli. OG Plasmid pNMEC31_31. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=562; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pNMEC31_31; RX PubMed=22470007; DOI=10.1016/j.plasmid.2012.03.001; RA Johnson T.J., Bielak E.M., Fortini D., Hansen L.H., Hasman H., RA Debroy C., Nolan L.K., Carattoli A.; RT "Expansion of the IncX plasmid family for improved identification and RT typing of novel plasmids in drug-resistant Enterobacteriaceae."; RL Plasmid 68:43-50(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JN935897; AFC60833.1; -; Genomic_DNA. DR RefSeq; YP_006903202.1; NC_019046.1. DR GeneID; 13903655; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 917 AA; 104992 MW; 77B22D38002C8DD8 CRC64; MSTLFKGLTR PALIRGLGVP LFPFLGMCLI CVLLGVWIHD LMYALILPGW YAIKRVTQID ERFFDLLYLR AIVKGHPLSN KRFSAVHYAG SQYNEVDISK VDNFMKLKDQ SSVEELIPYS SHITDNIIVT KNRDLLATWQ IDGAYFECVD SEDLSILTDQ LNTLIRSFEG KSVTLYPHRI RCKKDVRPVF NSKIHFVNRV MNDYYDSFPQ SEFFENKLFL TICFKPFTTE DKVTHFFSRS KKQKDIFKEP VNEMNEICDR LNTYLSRFHS RRLGLYEDHG VVYSDQLSLF QYLLSGRWQK VRVSSSPFYT YLGGKDLFFG NDAGQITASD HARYFRCIEI KDYFQETDAG ILDALMYLPV EYVVTSSFTA MDKQSAIKAL DDQIDKLEMT DDAAKSLLAD LKVGLDMVSS GYISFGKSHQ TLVVFADSPE RLVKDTNIVT STLEDLGLIV TYSTLSLGAA YFAQLPGNYT LRPRLSTLSS LNFAEMESFH NFFSGKEKGN TWGEKLITLR GSGNDIYHLN YHMTTEHQNF FGKNPTLGHT EILGTSNVGK TVLLMTKAFA AQQFGTPESF PANRKLKKLT TVFFDKDRAG EVGIRAMGGS YYRVKEGEPT GWNPAALPPT KRNIAFMKDL VRLLCTLNSE PLDDYQNSLI SDAVERLMQR SDRSYPISKL RPLIQEPDDT ETKRHGLKAR LKPWTQGEEF GWVFDNREDT FDVDNLDVFG IDGTEFLDNK VLASAASFYL IYRVTMLADG RRLLIYMDEF WQWINNEAFR DFVYNKLKTG RKLDMVLVVA TQSPDELIKS PIAAAVREQC ATHIYLANPK AKRSEYVDGL QVRELYFDKI KAIDPLSRQF LVVKNPQRKG ESDDFAAFAR LELGKAAYYL PVLSASKPQL ELFDEIWKEG MKPEEWLDTY LEQANLI // ID H9AXW3_ECOLX Unreviewed; 917 AA. AC H9AXW3; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 16-APR-2014, entry version 7. DE SubName: Full=IncX type IV secretion system protein VirB4; GN Name=virB4; ORFNames=rpec180_34; OS Escherichia coli. OG Plasmid pRPEC180_47. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=562; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=RPEC180; PLASMID=pRPEC180_47; RX PubMed=22470007; DOI=10.1016/j.plasmid.2012.03.001; RA Johnson T.J., Bielak E.M., Fortini D., Hansen L.H., Hasman H., RA Debroy C., Nolan L.K., Carattoli A.; RT "Expansion of the IncX plasmid family for improved identification and RT typing of novel plasmids in drug-resistant Enterobacteriaceae."; RL Plasmid 68:43-50(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JN935898; AFC60878.1; -; Genomic_DNA. DR RefSeq; YP_006953788.1; NC_019088.1. DR GeneID; 13906735; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 917 AA; 105009 MW; 61BEEDC07E12DC00 CRC64; MSTLFKGLTR PALIRGLGVP LYPFLGMCII CVLLGVWIHE AMYTLILPGW YAIRRVTQFD ERFFDLLYLR TLVKGYPLSN KRFSAVHYAG SQYNEVDISK VDNFMKLKDQ SSVEELIPYS SHITDNIIVT KNRDLLATWQ IDGAYFECVD SEDLSILTDQ LNTLIRSFEG KSVTLYPHRI RCKKGVRPVF NSKIPFVNRV MNDYYESFPQ SEFFENKLFL TICFKPFTTE DKVTHFFSRS KKQKDIFKEP VNEMNEICDR LNTYLSRFHS RRLGLYEDHG VVYSDQLSLF QYLLSGRWQK VRVSSSPFYT YLGGKDLFFG NDAGQITASD HARYFRCIEI KDYFQETDAG ILDALMYLPV EYVVTSSFTA MDKQSAIKAL DDQIDKLEMT DDAAKSLLAD LKVGLDMVSS GYISFGKSHQ TLVVFADSPE RLVKDTNIVT STLEDLGLIV TYSTLSLGAA YFAQLPGNYT LRPRLSTLSS LNFAEMESFH NFFSGKEKGN TWGEKLITLR GSGNDIYHLN YHMTTEHQNF FGKNPTLGHT EILGTSNVGK TVLLMTKAFA AQQFGTPESF PANRKLKKLT TVFFDKDRAG EVGIRAMGGS YYRVKEGEPT GWNPAALPPT KRNIAFMKDM VRLLCTLNSE PLDDYQNSLI SDAVERLMQR SDRSYPISKL RPLIQEPDDT ETKRHGLKAR LKPWTQGEEF GWVFDNREDT FDVDNLDVFG IDGTEFLDNK VLASAASFYL IYRVTMLADG RRLLIYMDEF WQWINNEAFR DFVYNKLKTG RKLDMVLVVA TQSPDELIKS PIAAAVREQC ATHIYLANPK AKCSEYVDGL QVRELYFDKI KAIDPLSRQF LVVKNPQRKG ESDDFAAFAR LELGKAAYYL PVLSASKPQL ELFDEIWKEG MKPEEWLDTY LEQANLI // ID H9AY05_ECOLX Unreviewed; 917 AA. AC H9AY05; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 16-APR-2014, entry version 7. DE SubName: Full=IncX type IV secretion system protein VirB4; GN Name=virB4; ORFNames=ec14_32; OS Escherichia coli. OG Plasmid pEC14_35. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=562; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=EC14; PLASMID=pEC14_35; RX PubMed=22470007; DOI=10.1016/j.plasmid.2012.03.001; RA Johnson T.J., Bielak E.M., Fortini D., Hansen L.H., Hasman H., RA Debroy C., Nolan L.K., Carattoli A.; RT "Expansion of the IncX plasmid family for improved identification and RT typing of novel plasmids in drug-resistant Enterobacteriaceae."; RL Plasmid 68:43-50(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JN935899; AFC60920.1; -; Genomic_DNA. DR RefSeq; YP_006953691.1; NC_019083.1. DR GeneID; 13906627; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 917 AA; 104923 MW; 469E1EFA84DDAFF5 CRC64; MSTVFKGLTR PALIRGLGVP LYPFLGMCVI CVLLGVWIHE AMYALILPGW YAIKRVTKID ERFFDLLYLR MQIKGNPLAN KRFNAVHYAG SSYDAVDISK VDNFMKLKDQ SSLEELIPYS SHITENLIVT KNHDLIATWQ IDGAYFECVD DADLTLLTDQ LNTLIRSFDG KPVTFYDHRI RGKKSVQPTF KSKIPFVNRV MNDYYSSLSE SEYFENKLYL SVCYKPFSAE DKVTHFLSRK KGNKNIFEEP INDMNEICGR LSTYLSRFHS RRLGLYEENG VVYSDQLSLF QKLLSGRWQK VRVTNSPFYT YLGGKDVFFG NDAGQITASD HARYFRCIEI KDYFRETDAG IFDALMYLPV EYVQTSSFTP IDKQSAIKAL DDQIDKLEMT DDAAQSLLTD LKVALDMVSS GYISFGKSHQ TLIVYADTPE RLVKDTNIVT TTLEDLGLIV TYSTMSLGAA YFAQLPGNYT LRPRLSPISS LNFAEMESFH NFFTGKEKGN TWGNNLITLG GSGNDVYHLN YHMTTEHQNY FGKNPTLGHT EILGTSNVGK TVVMMAKAFA AQQFGTPESF PPERKHKKLT TVWFDKDRAA EPGIRSMGGA YYRVKEGEPT GWNPAALPPT KRNISFMKDL VRLICSLNSE PLDDYQNRLI SDAVERLMQR SDRSYPISKL RPLILEPDDT ETRRHGLKAR LKPWTQGEEF GWVIDNPEDT FDVDNLDVFG IDGTEFLDNK VLSSVASFYL IYRVTMLADG RRLLIYMDEF WQWINNEAFR DFVYNKLKTA RKLDMVLVVA TQSPDELIKS PIAAAVREQC ATHIYLANPN AKRNEYVDEL QVRELYFDKI KAIDPLSRQF LVVKNPQRKG ESNDFAAFAR LDLGKAAYYL PVLSASKPQL ELFDEIWKEG MKPEEWLDIY LERANLI // ID H9K0M0_APIME Unreviewed; 312 AA. AC H9K0M0; DT 16-MAY-2012, integrated into UniProtKB/TrEMBL. DT 16-MAY-2012, sequence version 1. DT 14-MAY-2014, entry version 6. DE SubName: Full=Uncharacterized protein; GN Name=IRP30; OS Apis mellifera (Honeybee). OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; OC Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; OC Apoidea; Apidae; Apis. OX NCBI_TaxID=7460; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DH4; RG Honey bee genome project; RA Zhang L., Deng J., Wu Y.-Q., Kovar C., Aqrawi P., Bandaranaike D., RA Blankenburg K., Chen D., Denson S., Dinh H., Firestine M., Gross S., RA Han Y., Hernandez B., Holder M., Jackson L., Javaid M., Jing C., RA Jones J., Joshi V., Kamau G., Korchina V., Lee S., Lorensuhewa L., RA Mata R., Mathew T., Mims S., Ngo R., Nguyen L., Okwuonu G., Ongeri F., RA Osuji N., Pham C., Puazo M., Qu C., Quiroz J., Raj R., Rio Deiros D., RA Santibanez J., Scheel M., Scherer S., Vee V., Wang M., Xin Y., RA Richards S., Reid J.G., Newsham I., Worley K.C., Muzny D.M., Gibbs R.; RL Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases. RN [2] RP IDENTIFICATION. RC STRAIN=DH4; RG EnsemblMetazoa; RL Submitted (SEP-2013) to UniProtKB. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JN104327; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EnsemblMetazoa; GB10707-RA; GB10707-PA; GB10707. DR OMA; SELAPWI; -. DR InterPro; IPR023346; Lysozyme-like_dom. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR InterPro; IPR008258; TGlycosylase-like_SLT. DR Pfam; PF01464; SLT; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF53955; SSF53955; 1. PE 4: Predicted; KW Complete proteome; Reference proteome. SQ SEQUENCE 312 AA; 34313 MW; A3E7789B1162BA76 CRC64; MTCAPNDAVQ TLAAIASVES NFNTLAINDN TTKHNYTPSS EIEAIRIANN LIAAGHSVDL GLMQINSRNL QNINMSIKQA FDACSSIKAG AQILRENYKS ALQIAFSKYN TGSITKGFQN GYVNKIISRS EMFIPDLKGN VIATKNANLL INYPAWALSG AVEPTSALSE LAPWILSLCQ GGLIIICMYK GVHAFAEGRN ERLPMDKIAL ADTRPIIIFG MPFLWLLISL FGPAILAVFT IMIGYPNPWL FILAVPMCMS GRMIVAKDCN RPRILYLWIK TGKAFAYHKK GKGEILPILS TVRNQWGGYL HD // ID H9TIC0_SALET Unreviewed; 106 AA. AC H9TIC0; DT 13-JUN-2012, integrated into UniProtKB/TrEMBL. DT 13-JUN-2012, sequence version 1. DT 13-NOV-2013, entry version 4. DE SubName: Full=Inner membrane protein forms channel for type IV secretion of T-DNA complex, VirB3; GN Name=virB3; ORFNames=pSH146_65_39; OS Salmonella enterica subsp. enterica serovar Heidelberg. OG Plasmid pSH146_65. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella. OX NCBI_TaxID=611; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=146; PLASMID=pSH146_65; RA Han J., Lynne A.M., David D.E., Tang H., Foley S.L.; RT "DNA Sequence Analysis of Plasmids from Multidrug Resistant Salmonella RT enterica Serotype Heidelberg Isolates."; RL Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JN983044; AFG20938.1; -; Genomic_DNA. DR RefSeq; YP_006956203.1; NC_019115.1. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 106 AA; 11911 MW; C4EA81CA50B7A574 CRC64; MDKVNEHVSE SFMTYNGFNR PALIAGIPLM LLLFTAFFAV LTGFPAIFLW GIKGIIIPVI CALFLFIVKL ACENDSNALR VIRLNLMGLL LKIRHRDLII GYSSVR // ID I0AFD1_SALET Unreviewed; 917 AA. AC I0AFD1; DT 13-JUN-2012, integrated into UniProtKB/TrEMBL. DT 13-JUN-2012, sequence version 1. DT 16-APR-2014, entry version 10. DE SubName: Full=Type IV secretion/conjugal transfer ATPase; GN ORFNames=SU5_p0018; OS Salmonella enterica subsp. enterica serovar Heidelberg str. B182. OG Plasmid pB182_37. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella. OX NCBI_TaxID=1160717; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=B182; PLASMID=pB182_37; RX PubMed=22689230; DOI=10.1128/JB.00498-12; RA Le Bars H., Bousarghin L., Bonnaure-Mallet M., Jolivet-Gougeon A., RA Barloy-Hubler F.; RT "Complete Genome Sequence of the Strong Mutator Salmonella enterica RT subsp. enterica Serotype Heidelberg Strain B182."; RL J. Bacteriol. 194:3537-3538(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP003417; AFH47688.1; -; Genomic_DNA. DR RefSeq; YP_006089962.1; NC_017624.1. DR EnsemblBacteria; AFH47688; AFH47688; SU5_p0018. DR BioCyc; SENT1160717:GLJS-4600-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 917 AA; 105059 MW; C156E0687752760E CRC64; MSTLFKGLTR PALIRGLGVP LYPFLGMCII CVLLGVWIHE AMYALILPGW YAIRRVTQFD ERFFDLLYLR TLVKGHPLSN KRFSAVHYAG SQYDEVDISK VDNFMKLKDQ SSVEELIPYS SHITDNIIVT KNRDLLATWQ IDGAYFECVD SEDLSILTDQ LNTLIRSFEG KSVTLYPHRI RCKKDVRPVF NSKIPFVNRV MNDYYESFPQ SEFFENKLFL TICFKPFTTE DKVTHFFSRS KKQKDIFKEP VNEMNEICDR LNTYLSRFHS RRLGLYEDHG VVYSDQLSLF QYLLSGRWQK VRVSSSPFYT YLGGKDLFFG NDAGQITASD HARYFRCIEI KDYFQETDAG ILDALMYLPV EYVVTSSFTA MDKQSAIKAL DDQIDKLEMT DDAAKSLLAD LKVGLDMVSS GYISFGKSHQ TLVVFADSPE RLVKDTNIVT STLEDLGLIV TYSTLSLGAA YFAQLPGNYT LRPRLSILSS LNFAEMESFH NFFSGKEKGN TWGEKLITLR GSGNDIYHLN YHMTTEHQNF FGKNPTLGHT EILGTSNVGK TVLLMTKAFA AQQFGTPESF PANRKLKKLT TVFFDKDRAG EVGIRAMGGS YYRVKEGEPT GWNPAALPPT KRNIAFMKDL VRLLCTLNSE PLDDYQNSLI SDAVERLMQR SDRSYPISKL RPLIQEPDDT ETKRHGLKAR LKPWTQGEEF GWVFDNREDT FDVDNLDVFG IDGTEFLDNK VLASAASFYL IYRVTMLADG RRLLIYMDEF WQWINNEAFR DFVYNKLKTG RKLDMVLVVA TQSPDELIKS PIAAAVREQC ATHIYLANPK AKRSEYVDGL QVRELYFDKI KAIDPLSRQF LVVKNPQRKG ESDDFAAFAR LELGKAAYYL PVLSASKPQL ELFDEIWKEG MKPEEWLDTY LEQANLI // ID I0GQI9_SELRL Unreviewed; 88 AA. AC I0GQI9; DT 13-JUN-2012, integrated into UniProtKB/TrEMBL. DT 13-JUN-2012, sequence version 1. DT 29-MAY-2013, entry version 6. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=SELR_13180; OS Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / OS TAM6421). OC Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; OC Selenomonas. OX NCBI_TaxID=927704; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NBRC 103574 / TAM6421; RA Oguchi A., Ankai A., Kaneko J., Yamada-Narita S., Fukui S., RA Takahashi M., Onodera T., Kojima S., Fushimi T., Abe N., Kamio Y., RA Yamazaki S., Fujita N.; RT "Whole genome sequence of Selenomonas ruminantium subsp. lactilytica RT TAM6421."; RL Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP012292; BAL83026.1; -; Genomic_DNA. DR RefSeq; YP_005433049.1; NC_017068.1. DR EnsemblBacteria; BAL83026; BAL83026; SELR_13180. DR GeneID; 12024334; -. DR KEGG; sri:SELR_13180; -. DR KO; K03198; -. DR BioCyc; SRUM927704:GLJZ-1366-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 88 AA; 10168 MW; E75E7B6F953DC69D CRC64; MSEEKKRMEF KLPLFSSLTE PVLLMGAPPF MIVFNICVAG IFVLSFHFFW IIPLNIAIHA ATIYVTKQDA DAFECLRSYM QQSRTYNV // ID I0IJJ1_PHYMF Unreviewed; 89 AA. AC I0IJJ1; DT 13-JUN-2012, integrated into UniProtKB/TrEMBL. DT 13-JUN-2012, sequence version 1. DT 13-NOV-2013, entry version 7. DE SubName: Full=Putative conjugal transfer protein TrbD; GN Name=trbD; OrderedLocusNames=PSMK_p00670; OS Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / OS FYK2301M01). OG Plasmid pPSMK1. OC Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; OC Phycisphaeraceae; Phycisphaera. OX NCBI_TaxID=1142394; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NBRC 102666 / KCTC 22515 / FYK2301M01; PLASMID=pPSMK1; RA Ankai A., Hosoyama A., Terui Y., Sekine M., Fukai R., Kato Y., RA Nakamura S., Yamada-Narita S., Kawakoshi A., Fukunaga Y., Yamazaki S., RA Fujita N.; RT "Complete genome sequence of Phycisphaera mikurensis NBRC 102666."; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP012339; BAM05429.1; -; Genomic_DNA. DR RefSeq; YP_005447326.1; NC_017081.1. DR EnsemblBacteria; BAM05429; BAM05429; PSMK_p00670. DR GeneID; 11948385; -. DR KEGG; phm:PSMK_p00670; -. DR KO; K03198; -. DR BioCyc; PMIK1142394:GLIF-3320-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 89 AA; 10074 MW; 72375F6124B21281 CRC64; MRSEHPEGWV VPLHVSLVTP VLLMGVPRPV GILILMVSLI ITMSLGLWYL GIPLGLGCWA LATWLTRLDP QWFEIGQVHL RLPKVFHTR // ID I0KKA4_STEMA Unreviewed; 94 AA. AC I0KKA4; DT 13-JUN-2012, integrated into UniProtKB/TrEMBL. DT 13-JUN-2012, sequence version 1. DT 22-JAN-2014, entry version 8. DE SubName: Full=Conjugative transfer protein TrbD; GN Name=trbD; ORFNames=SMD_0924; OS Stenotrophomonas maltophilia D457. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Stenotrophomonas; OC Stenotrophomonas maltophilia group. OX NCBI_TaxID=1163399; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=D457; RX PubMed=22689246; DOI=10.1128/JB.00602-12; RA Lira F., Hernandez A., Belda E., Sanchez M.B., Moya A., Silva F.J., RA Martinez J.L.; RT "Whole-genome sequence of Stenotrophomonas maltophilia D457, a RT clinical isolate and a model strain."; RL J. Bacteriol. 194:3563-3564(2012). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=D457; RA Silva F.; RL Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HE798556; CCH11493.1; -; Genomic_DNA. DR RefSeq; YP_006183671.1; NC_017671.1. DR EnsemblBacteria; CCH11493; CCH11493; SMD_0924. DR GeneID; 12744384; -. DR KEGG; smz:SMD_0924; -. DR KO; K03198; -. DR BioCyc; SMAL1163399:GLKX-924-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 94 AA; 9971 MW; 55FCBD6C5BE85483 CRC64; MSAADEGTPG FALGFEVPLH RSLTEPILLG GAPRTVAIAN GTLAAAVGLG LQLWIPGVVL WIVGHSLAVW GARVDPQFMQ VFARHIKHRP LLDV // ID I0KQ25_STEMA Unreviewed; 88 AA. AC I0KQ25; DT 13-JUN-2012, integrated into UniProtKB/TrEMBL. DT 13-JUN-2012, sequence version 1. DT 22-JAN-2014, entry version 8. DE SubName: Full=Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB3); GN ORFNames=SMD_2633; OS Stenotrophomonas maltophilia D457. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Stenotrophomonas; OC Stenotrophomonas maltophilia group. OX NCBI_TaxID=1163399; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=D457; RX PubMed=22689246; DOI=10.1128/JB.00602-12; RA Lira F., Hernandez A., Belda E., Sanchez M.B., Moya A., Silva F.J., RA Martinez J.L.; RT "Whole-genome sequence of Stenotrophomonas maltophilia D457, a RT clinical isolate and a model strain."; RL J. Bacteriol. 194:3563-3564(2012). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=D457; RA Silva F.; RL Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; HE798556; CCH13165.1; -; Genomic_DNA. DR RefSeq; YP_006185336.1; NC_017671.1. DR EnsemblBacteria; CCH13165; CCH13165; SMD_2633. DR GeneID; 12743469; -. DR KEGG; smz:SMD_2633; -. DR KO; K03198; -. DR BioCyc; SMAL1163399:GLKX-2633-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 88 AA; 10546 MW; 934E723150CC3C4E CRC64; MFLGVPYLPF FMVAGGLLLL SMYTNFWFLL TIPVAVFIMR QMAKRDEMIF RLLGLRLMFK LKVRNVQEHD GMWVFNPNHY RDKPARMD // ID I0M1T1_SALET Unreviewed; 917 AA. AC I0M1T1; DT 13-JUN-2012, integrated into UniProtKB/TrEMBL. DT 13-JUN-2012, sequence version 1. DT 16-APR-2014, entry version 9. DE SubName: Full=Pilx3-4 protein; GN ORFNames=SEEH1563_08900; OS Salmonella enterica subsp. enterica serovar Heidelberg str. 41563. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella. OX NCBI_TaxID=1124941; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=41563; RX PubMed=22628505; DOI=10.1128/JB.00419-12; RA Hoffmann M., Zhao S., Luo Y., Li C., Folster J.P., Whichard J., RA Allard M.W., Brown E.W., McDermott P.F.; RT "Genome Sequences of Five Salmonella enterica Serovar Heidelberg RT Isolates Associated with a 2011 Multistate Outbreak in the United RT States."; RL J. Bacteriol. 194:3274-3275(2012). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=41563; RA Strain E.A., Timme R.E., Brown E., Allard M.W., Luo Y.L.; RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AJGX01000028; EIC36101.1; -; Genomic_DNA. DR EnsemblBacteria; EIC36101; EIC36101; SEEH1563_08900. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 917 AA; 105075 MW; 59A3F25560A2AF2B CRC64; MSTLFKGLTR PALIRGLGVP LYPFLGMCII CVLLGVWIHE AMYALILPGW YAIRRVTQFD ERFFDLLYLR TLVKGHPLSN KRFSAVHYAG SQYDEVDISK VDNFMKLKDQ SSVEELIPYS SHITDNIIVT KNRDLLATWQ IDGAYFECVD SEDLSILTDQ LNTLIRSFEG KSVTLYPHRI RCKKDVRPVF NSKIPFVNRV MNDYYESFPQ SEFFENKLFL TICFKPFTTE DKVTHFFSRS KKQKDIFKEP VNEMNEICDR LNTYLSRFHS RRLGLYEDHG VVYSDQLSLF QYLLSGRWQK VRVSSSPFYT YLGGKDLFFG NDAGQITASD HARYFRCIEI KDYFQETDVG ILDALMYLPV EYVVTSSFTA MDKQSAIKAL DDQIDKLEMT DDAAKSLLAD LKVGLDMVSS GYISFGKSHQ TLVVFADSPE RLVKDTNIVT STLEDLGLIV TYSTLSLGAA YFAQLPGNYT LRPRLSTLSS LNFAEMESFH NFFSGKEKGN TWGEKLITLR GSGNDIYHLN YHMTTEHQNF FGKNPTLGHT EILGTSNVGK TVLLMTKAFA AQQFGTPESF PANRKLKKLT TVFFDKDRAG EVGIRAMGGS YYRVKEGEPT GWNPAALPPT KRNIAFMKDL VRLLCTLNSE PLDDYQNSLI SDAVERLMQR SDRSYPISKL RPLIQEPDDT ETKRHGLKAR LKPWTQGEEF GWVFDNREDT FDVDNLDVFG IDGTEFLDNK VLASAASFYL IYRVTMLADG RRLLIYMDEF WQWINNEAFR DFVYNKLKTG RKLDMVLVVA TQSPDELIKS PIAAAVREQC ATHIYLANPK AKRSEYVDGL QVRELYFDKI KAIDPLSRQF LVVKNPQRKG ESDDFAAFAR LELGKAAYYL PVLSASKPQL ELFDEIWKEG MKPEEWLDTY LEQANLI // ID I0M5M7_SALET Unreviewed; 917 AA. AC I0M5M7; DT 13-JUN-2012, integrated into UniProtKB/TrEMBL. DT 13-JUN-2012, sequence version 1. DT 16-APR-2014, entry version 11. DE SubName: Full=Pilx3-4 protein; GN ORFNames=SEEH1573_18207; OS Salmonella enterica subsp. enterica serovar Heidelberg str. 41573. OG Plasmid pCFSAN000316_01. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella. OX NCBI_TaxID=1128959; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=41573; PLASMID=pCFSAN000316_01; RX PubMed=22628505; DOI=10.1128/JB.00419-12; RA Hoffmann M., Zhao S., Luo Y., Li C., Folster J.P., Whichard J., RA Allard M.W., Brown E.W., McDermott P.F.; RT "Genome Sequences of Five Salmonella enterica Serovar Heidelberg RT Isolates Associated with a 2011 Multistate Outbreak in the United RT States."; RL J. Bacteriol. 194:3274-3275(2012). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=41573; PLASMID=pCFSAN000316_01; RA Strain E.A., Timme R.E., Brown E., Allard M.W., Luo Y.L.; RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AJGY01000090; EIC37447.1; -; Genomic_DNA. DR EnsemblBacteria; EIC37447; EIC37447; SEEH1573_18207. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 917 AA; 105075 MW; 59A3F25560A2AF2B CRC64; MSTLFKGLTR PALIRGLGVP LYPFLGMCII CVLLGVWIHE AMYALILPGW YAIRRVTQFD ERFFDLLYLR TLVKGHPLSN KRFSAVHYAG SQYDEVDISK VDNFMKLKDQ SSVEELIPYS SHITDNIIVT KNRDLLATWQ IDGAYFECVD SEDLSILTDQ LNTLIRSFEG KSVTLYPHRI RCKKDVRPVF NSKIPFVNRV MNDYYESFPQ SEFFENKLFL TICFKPFTTE DKVTHFFSRS KKQKDIFKEP VNEMNEICDR LNTYLSRFHS RRLGLYEDHG VVYSDQLSLF QYLLSGRWQK VRVSSSPFYT YLGGKDLFFG NDAGQITASD HARYFRCIEI KDYFQETDVG ILDALMYLPV EYVVTSSFTA MDKQSAIKAL DDQIDKLEMT DDAAKSLLAD LKVGLDMVSS GYISFGKSHQ TLVVFADSPE RLVKDTNIVT STLEDLGLIV TYSTLSLGAA YFAQLPGNYT LRPRLSTLSS LNFAEMESFH NFFSGKEKGN TWGEKLITLR GSGNDIYHLN YHMTTEHQNF FGKNPTLGHT EILGTSNVGK TVLLMTKAFA AQQFGTPESF PANRKLKKLT TVFFDKDRAG EVGIRAMGGS YYRVKEGEPT GWNPAALPPT KRNIAFMKDL VRLLCTLNSE PLDDYQNSLI SDAVERLMQR SDRSYPISKL RPLIQEPDDT ETKRHGLKAR LKPWTQGEEF GWVFDNREDT FDVDNLDVFG IDGTEFLDNK VLASAASFYL IYRVTMLADG RRLLIYMDEF WQWINNEAFR DFVYNKLKTG RKLDMVLVVA TQSPDELIKS PIAAAVREQC ATHIYLANPK AKRSEYVDGL QVRELYFDKI KAIDPLSRQF LVVKNPQRKG ESDDFAAFAR LELGKAAYYL PVLSASKPQL ELFDEIWKEG MKPEEWLDTY LEQANLI // ID I0MY89_SALET Unreviewed; 917 AA. AC I0MY89; DT 13-JUN-2012, integrated into UniProtKB/TrEMBL. DT 13-JUN-2012, sequence version 1. DT 16-APR-2014, entry version 9. DE SubName: Full=Pilx3-4 protein; GN ORFNames=SEEH1566_01914; OS Salmonella enterica subsp. enterica serovar Heidelberg str. 41566. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella. OX NCBI_TaxID=1124942; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=41566; RX PubMed=22628505; DOI=10.1128/JB.00419-12; RA Hoffmann M., Zhao S., Luo Y., Li C., Folster J.P., Whichard J., RA Allard M.W., Brown E.W., McDermott P.F.; RT "Genome Sequences of Five Salmonella enterica Serovar Heidelberg RT Isolates Associated with a 2011 Multistate Outbreak in the United RT States."; RL J. Bacteriol. 194:3274-3275(2012). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=41566; RA Strain E.A., Timme R.E., Brown E., Allard M.W., Luo Y.L.; RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AJGZ01000038; EIC47109.1; -; Genomic_DNA. DR EnsemblBacteria; EIC47109; EIC47109; SEEH1566_01914. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 917 AA; 105075 MW; 59A3F25560A2AF2B CRC64; MSTLFKGLTR PALIRGLGVP LYPFLGMCII CVLLGVWIHE AMYALILPGW YAIRRVTQFD ERFFDLLYLR TLVKGHPLSN KRFSAVHYAG SQYDEVDISK VDNFMKLKDQ SSVEELIPYS SHITDNIIVT KNRDLLATWQ IDGAYFECVD SEDLSILTDQ LNTLIRSFEG KSVTLYPHRI RCKKDVRPVF NSKIPFVNRV MNDYYESFPQ SEFFENKLFL TICFKPFTTE DKVTHFFSRS KKQKDIFKEP VNEMNEICDR LNTYLSRFHS RRLGLYEDHG VVYSDQLSLF QYLLSGRWQK VRVSSSPFYT YLGGKDLFFG NDAGQITASD HARYFRCIEI KDYFQETDVG ILDALMYLPV EYVVTSSFTA MDKQSAIKAL DDQIDKLEMT DDAAKSLLAD LKVGLDMVSS GYISFGKSHQ TLVVFADSPE RLVKDTNIVT STLEDLGLIV TYSTLSLGAA YFAQLPGNYT LRPRLSTLSS LNFAEMESFH NFFSGKEKGN TWGEKLITLR GSGNDIYHLN YHMTTEHQNF FGKNPTLGHT EILGTSNVGK TVLLMTKAFA AQQFGTPESF PANRKLKKLT TVFFDKDRAG EVGIRAMGGS YYRVKEGEPT GWNPAALPPT KRNIAFMKDL VRLLCTLNSE PLDDYQNSLI SDAVERLMQR SDRSYPISKL RPLIQEPDDT ETKRHGLKAR LKPWTQGEEF GWVFDNREDT FDVDNLDVFG IDGTEFLDNK VLASAASFYL IYRVTMLADG RRLLIYMDEF WQWINNEAFR DFVYNKLKTG RKLDMVLVVA TQSPDELIKS PIAAAVREQC ATHIYLANPK AKRSEYVDGL QVRELYFDKI KAIDPLSRQF LVVKNPQRKG ESDDFAAFAR LELGKAAYYL PVLSASKPQL ELFDEIWKEG MKPEEWLDTY LEQANLI // ID I0QYC6_9ENTR Unreviewed; 915 AA. AC I0QYC6; DT 13-JUN-2012, integrated into UniProtKB/TrEMBL. DT 13-JUN-2012, sequence version 1. DT 16-APR-2014, entry version 5. DE SubName: Full=Putative conjugal transfer protein; GN ORFNames=SPM24T3_02858; OS Serratia sp. M24T3. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Serratia. OX NCBI_TaxID=932213; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=M24T3; RX PubMed=22740681; DOI=10.1128/JB.00670-12; RA Proenca D.N., Espirito Santo C., Grass G., Morais P.V.; RT "Draft Genome Sequence of Serratia sp. Strain M24T3, Isolated from RT Pinewood Disease Nematode Bursaphelenchus xylophilus."; RL J. Bacteriol. 194:3764-3764(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AJHJ01000002; EIC86299.1; -; Genomic_DNA. DR EnsemblBacteria; EIC86299; EIC86299; SPM24T3_02858. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 915 AA; 103628 MW; 6521914A2556F507 CRC64; MATLNKALTR PAAIAGIPLV PFVMVSGAIV LLAVYVSYYL ILLLIPAWLE MKAKARTDIH YFGLLWLAFK TRGRFGINKH FGANALLANR YDAVDVSEFI EKMKLNERVT LEKYIPYSSH IHPHVIRNRQ GDLVASWELE GTVFECEDEH HLTLMATHLN NVIRAYEGLP ITFYLHRIRE KYHDAFDANS GIPFSDEVTR LYYQPISEKP FWRHRLFFTL CYAPLSPLEK KAMKAQPSGK RKAALDDALK MMLEHRDALA SALSRYTATP LGMYEENRRV YSAQLSLYHR LLTGQWQKVA VTRAPFYETL STPDVFFTAD TAECQTVGGS RFFRSLEIKD YSPETATGLL DALLYAESEY VLTQSFTCMA RDEAQKHIRL AEKRLTSADD DAISQREELI VLRDLLQSGH VSCGKYHFSL LVSSDSADQV VKDTNALAQP FADLGIMTTL STLSLPAAYL AQLPGIYTLR PRLVAVSSQN FADLASLHNF HPHKRNGNPW GDAIAILKSP GGGGYYLNLH DSQSGRDDFN EKTPGNTAII GKTGSGKTML MTMMQQLMQK YRNPATFSES APLKQLTTVY FDKDRAAEMA IRQMGGRYFR IRTGTPTGFN PFKLAPTRRN ISFIKRLVRM LCRRNGKPLE PRDEERISAA VDTIMLDYPT EYRKFGITRL LEVLPEPPTT DARTNGIRIR LKQWAQGGEF GWVFDNEEDT FNISNIDNVG IDGTEFLDDD DIRGPITFYL LYRVTSLLDG RRLVMFMDEF WKWLADVEFS RFSLNMLKVI RKLNGIFVPA TQSPDEIVKH PIAPAIIEQC GTQIFLANPK ASRADYVEKM KVPESVYDIV RNLDPGERSM VVLKTPLRAG ETRPFVAVAK MDLSGLGKLT KMLSGSEDNL KLFDTLYQEG MQPDDWKAAF LEQAL // ID I1AJ25_PSEAI Unreviewed; 90 AA. AC I1AJ25; DT 13-JUN-2012, integrated into UniProtKB/TrEMBL. DT 13-JUN-2012, sequence version 1. DT 19-FEB-2014, entry version 6. DE SubName: Full=Conjugal transfer TrbD transmembrane protein; GN ORFNames=CF510_08462; OS Pseudomonas aeruginosa PADK2_CF510. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. OX NCBI_TaxID=1134459; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=PADK2_CF510; RX PubMed=22672046; DOI=10.1111/j.1462-2920.2012.02795.x; RA Rau M.H., Marvig R.L., Ehrlich G.D., Molin S., Jelsbak L.; RT "Deletion and acquisition of genomic content during early stage RT adaptation of Pseudomonas aeruginosa to a human host environment."; RL Environ. Microbiol. 14:2200-2211(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AJHI01000009; EIE46496.1; -; Genomic_DNA. DR EnsemblBacteria; EIE46496; EIE46496; CF510_08462. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Membrane; Transmembrane. SQ SEQUENCE 90 AA; 9719 MW; BFD713F903792464 CRC64; MNGERELIPG FEVPLHRSLA EPILLGGAPR NVAILNGTLA AVVGLGLQLW LPGLALWLVG HSLAVWGARL DPQFLQVFAR HIKQPSLLDV // ID I1AYY8_9RHOB Unreviewed; 70 AA. AC I1AYY8; DT 13-JUN-2012, integrated into UniProtKB/TrEMBL. DT 13-JUN-2012, sequence version 1. DT 03-APR-2013, entry version 4. DE SubName: Full=Type IV secretory pathway VirB3 family protein; GN ORFNames=C357_07211; OS Citreicella sp. 357. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Citreicella. OX NCBI_TaxID=766499; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=357; RX PubMed=22965089; DOI=10.1128/JB.01261-12; RA Suarez-Suarez L.Y., Brunet-Galmes I., Pina-Villalonga J.M., RA Christie-Oleza J.A., Pena A., Bennasar A., Armengaud J., Nogales B., RA Bosch R.; RT "Draft Genome Sequence of Citreicella aestuarii Strain 357, a Member RT of the Roseobacter Clade Isolated without Xenobiotic Pressure from a RT Petroleum-Polluted Beach."; RL J. Bacteriol. 194:5464-5465(2012). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AJKJ01000060; EIE51709.1; -; Genomic_DNA. DR EnsemblBacteria; EIE51709; EIE51709; C357_07211. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 70 AA; 7948 MW; CA74F421626E0BDD CRC64; MYAMVWLFGS VLLFVWVQHI AVLAVAALLY PVLWKAADWD PRFIDVMMTA LQETPPTRNR SIHGGDSYAP // ID O50329_ECOLX Unreviewed; 104 AA. AC O50329; DT 01-JUN-1998, integrated into UniProtKB/TrEMBL. DT 01-JUN-1998, sequence version 1. DT 22-JAN-2014, entry version 38. DE SubName: Full=TrwM protein; GN Name=trwM; OS Escherichia coli. OG Plasmid IncW R388, and Plasmid R388. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=562; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=R388; RX PubMed=7022127; DOI=10.1007/BF00428733; RA Swift G., McCarthy B.J., Heffron F.; RT "DNA sequence of a plasmid-encoded dihydrofolate reductase."; RL Mol. Gen. Genet. 181:441-447(1981). RN [2] RP NUCLEOTIDE SEQUENCE. RC PLASMID=R388; RX PubMed=3054482; DOI=10.1007/BF00339581; RA Sundstrom L., Radstrom P., Swedberg G., Skold O.; RT "Site-specific recombination promotes linkage between trimethoprim-and RT sulfonamide resistance genes. Sequence characterization of dhfrV and RT sulI and a recombination active locus of Tn21."; RL Mol. Gen. Genet. 213:191-201(1988). RN [3] RP NUCLEOTIDE SEQUENCE. RC PLASMID=R388; RX PubMed=2038309; DOI=10.1007/BF00260661; RA Llosa M., Bolland S., de la Cruz F.; RT "Structural and functional analysis of the origin of conjugal transfer RT of the broad-host-range IncW plasmid R388 and comparison with the RT related IncN plasmid R46."; RL Mol. Gen. Genet. 226:473-483(1991). RN [4] RP NUCLEOTIDE SEQUENCE. RC PLASMID=R388; RX PubMed=7929000; RA Hall R.M., Brown H.J., Brookes D.E., Stokes H.W.; RT "Integrons found in different locations have identical 5' ends but RT variable 3' ends."; RL J. Bacteriol. 176:6286-6294(1994). RN [5] RP NUCLEOTIDE SEQUENCE. RC PLASMID=R388; RX PubMed=8289274; DOI=10.1006/jmbi.1994.1005; RA Llosa M., Bolland S., de la Cruz F.; RT "Genetic organization of the conjugal DNA processing region of the RT IncW plasmid R388."; RL J. Mol. Biol. 235:448-464(1994). RN [6] RP NUCLEOTIDE SEQUENCE. RC STRAIN=K-12; PLASMID=IncW R388, and R388; RX PubMed=9325277; DOI=10.1074/jbc.272.41.25583; RA Bolland S., Llosa M., de la Cruz F.; RT "Genetic organization of the region involved in conjugative pilus RT synthesis, export and assembly of the incW plasmid R388."; RL J. Biol. Chem. 272:25583-25590(1997). RN [7] RP NUCLEOTIDE SEQUENCE. RC PLASMID=R388; RX PubMed=11959558; DOI=10.1128/AAC.46.5.1288-1294.2002; RA Partridge S.R., Brown H.J., Hall R.M.; RT "Characterization and movement of the class 1 integron known as Tn2521 RT and Tn1405."; RL Antimicrob. Agents Chemother. 46:1288-1294(2002). RN [8] RP NUCLEOTIDE SEQUENCE. RC STRAIN=K-12; PLASMID=IncW R388; RA de la Cruz F.; RL Submitted (JUL-2002) to the EMBL/GenBank/DDBJ databases. RN [9] RP NUCLEOTIDE SEQUENCE. RC PLASMID=R388; RX PubMed=12533481; DOI=10.1128/JB.185.3.1045-1058.2003; RA Rabel C., Grahn A.M., Lurz R., Lanka E.; RT "The VirB4 family of proposed traffic nucleoside triphosphatases: RT common motifs in plasmid RP4 TrbE are essential for conjugation and RT phage adsorption."; RL J. Bacteriol. 185:1045-1058(2003). RN [10] RP NUCLEOTIDE SEQUENCE. RC PLASMID=R388; RX PubMed=16391056; DOI=10.1128/AEM.72.1.291-297.2006; RA Sota M., Yano H., Nagata Y., Ohtsubo Y., Genka H., Anbutsu H., RA Kawasaki H., Tsuda M.; RT "Functional analysis of unique class II insertion sequence IS1071."; RL Appl. Environ. Microbiol. 72:291-297(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; X81123; CAA57023.1; -; Genomic_DNA. DR EMBL; BR000038; FAA00029.1; -; Genomic_DNA. DR TCDB; 3.A.7.2.1; the type iv (conjugal dna-protein transfer or virb) secretory pathway (ivsp) family. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 104 AA; 12235 MW; 652B59C4B1C5D4AD CRC64; MKPPQQQHEA FPLFKGATRL PTILGEPMIP LMAMVMGVAV IALTVSIWWW ALVPPLWFIM AQITKNDDKA FRIWWLWIDT KFRNRNKGFW GASSYSPANY RKRR // ID O66171_RHIRD Unreviewed; 99 AA. AC O66171; DT 01-AUG-1998, integrated into UniProtKB/TrEMBL. DT 01-AUG-1998, sequence version 1. DT 14-MAY-2014, entry version 55. DE SubName: Full=Tiorf15 protein; DE SubName: Full=TrbD; GN Name=trbD; Synonyms=tiorf15; OS Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium OS radiobacter). OG Plasmid pTi-SAKURA, and Plasmid pTiC58. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=358; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=C58; PLASMID=pTiC58; RX PubMed=8197112; DOI=10.1073/pnas.91.11.4639; RA Hwang I., Li P.L., Zhang L., Piper K.R., Cook D.M., Tate M.E., RA Farrand S.K.; RT "TraI, a LuxI homologue, is responsible for production of conjugation RT factor, the Ti plasmid N-acylhomoserine lactone autoinducer."; RL Proc. Natl. Acad. Sci. U.S.A. 91:4639-4643(1994). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MAFF 301001; PLASMID=pTi-SAKURA; RX PubMed=9524202; DOI=10.1016/S0167-4781(97)00182-6; RA Suzuki K., Ohta N., Hattori Y., Uraji M., Katoh A., Yoshida K.; RT "Novel structural difference between nopaline- and octopine-type trbJ RT genes: construction of genetic and physical map and sequencing of RT trb/traI and rep gene clusters of a new Ti plasmid pTi-SAKURA."; RL Biochim. Biophys. Acta 1396:1-7(1998). RN [3] RP NUCLEOTIDE SEQUENCE. RC STRAIN=C58; PLASMID=pTiC58; RX PubMed=9829924; RA Li P.L., Everhart D.M., Farrand S.K.; RT "Genetic and sequence analysis of the pTiC58 trb locus, encoding a RT mating-pair formation system related to members of the type IV RT secretion family."; RL J. Bacteriol. 180:6164-6172(1998). RN [4] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MAFF 301001; PLASMID=pTi-SAKURA; RA Hattori Y., Suzuki K., Ohta N., Uraji M., Katoh A., Yoshida K.; RT "Genome structure of pTi-SAKURA(I): Strategy for DNA sequencing of a RT Japanese cherry-Ti plasmid."; RL Nucleic Acids Symp. Ser. 37:159-160(1998). RN [5] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MAFF 301001; PLASMID=pTi-SAKURA; RA Ohta N., Suzuki K., Hattori Y., Uraji M., Katoh A., Yoshida K.; RT "Genome structure of pTi-SAKURA (III): Characteristics of T-DNA."; RL Nucleic Acids Symp. Ser. 39:185-186(1998). RN [6] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MAFF 301001; PLASMID=pTi-SAKURA; RA Uraji M., Suzuki K., Ohta N., Hattori Y., Katoh A., Yoshida K.; RT "Genome structure of pTi-SAKURA (IV): Characteristics of tra region."; RL Nucleic Acids Symp. Ser. 39:187-188(1998). RN [7] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MAFF 301001; PLASMID=pTi-SAKURA; RA Hattori Y., Suzuki K., Ohta N., Uraji M., Katoh A., Yoshida K.; RT "Genome structure of pTi-SAKURA (V): Complete nucleotide sequence of RT plasmid pTi-SAKURA's vir region in Agrobacterium tumefaciens."; RL Nucleic Acids Symp. Ser. 39:265-266(1998). RN [8] RP NUCLEOTIDE SEQUENCE. RC STRAIN=C58; PLASMID=pTiC58; RA Li P.-L., Farrand S.K.; RL Submitted (APR-1998) to the EMBL/GenBank/DDBJ databases. RN [9] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MAFF 301001; PLASMID=pTi-SAKURA; RX PubMed=10721727; DOI=10.1016/S0378-1119(99)00502-8; RA Suzuki K., Hattori Y., Uraji M., Ohta N., Iwata K., Murata K., RA Katoh A., Yoshida K.; RT "Complete nucleotide sequence of a plant tumor-inducing Ti plasmid."; RL Gene 242:331-336(2000). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AF057718; AAC82630.1; -; Genomic_DNA. DR EMBL; AB016260; BAA87640.1; -; Genomic_DNA. DR PIR; AE3232; AE3232. DR RefSeq; NP_053255.1; NC_002147.1. DR ProteinModelPortal; O66171; -. DR GeneID; 1224007; -. DR PATRIC; 20820302; VBIAgrTum91616_5245. DR OrthoDB; EOG6N6849; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 99 AA; 11265 MW; 63EC6C6E45738DD0 CRC64; MAEPGSNLAR SRVHRALSRP NLLMGADREL VLLTGLAAVI LIFVVLTWYA ALFGVAIWLV AVAALRMMAK SDPLMRRVYL RHVSYRSHYR PTSTPWRKF // ID O66283_RHIRD Unreviewed; 108 AA. AC O66283; DT 01-AUG-1998, integrated into UniProtKB/TrEMBL. DT 01-AUG-1998, sequence version 1. DT 13-NOV-2013, entry version 26. DE SubName: Full=VirB3; OS Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium OS radiobacter). OG Plasmid pRiA4. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=358; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=A4; PLASMID=pRiA4; RX PubMed=9679196; DOI=10.1093/dnares/5.2.87; RA Liang Y., Aoyama T., Oka A.; RT "Structural characterization of the virB operon on the hairy-root- RT inducing plasmid A4."; RL DNA Res. 5:87-93(1998). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AB011800; BAA28697.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 108 AA; 11676 MW; B006218393DC6E50 CRC64; MNDRLEEATL YLAATRPALF LGVPLTLAGL FMMFAGFVIV IVQNPLYEVV LLPLWFGARL VVERDYNAAS VVLLFLQTAG RSVDGLIWGG ASVSPNPIKV PARGRGMA // ID P71179_ENTAE Unreviewed; 103 AA. AC P71179; DT 01-FEB-1997, integrated into UniProtKB/TrEMBL. DT 01-FEB-1997, sequence version 1. DT 14-MAY-2014, entry version 38. DE SubName: Full=TrbD; GN Name=trbD; OS Enterobacter aerogenes (Aerobacter aerogenes). OG Plasmid R751. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Enterobacter. OX NCBI_TaxID=548; RN [1] RP NUCLEOTIDE SEQUENCE. RX PubMed=8954881; DOI=10.1006/plas.1996.0037; RA Thorsted P.B., Shah D.S., Macartney D., Kostelidou K., Thomas C.M.; RT "Conservation of the genetic switch between replication and transfer RT genes of IncP plasmids but divergence of the replication functions RT which are major host-range determinants."; RL Plasmid 36:95-111(1996). RN [2] RP NUCLEOTIDE SEQUENCE. RC PLASMID=R751; RX PubMed=9753548; DOI=10.1006/jmbi.1998.2060; RA Thorsted P.B., Macartney D.P., Akhtar P., Haines A.S., Ali N., RA Davidson P., Stafford T., Pocklington M.J., Pansegrau W., RA Wilkins B.M., Lanka E., Thomas C.M.; RT "Complete sequence of the IncPbeta plasmid R751: implications for RT evolution and organisation of the IncP backbone."; RL J. Mol. Biol. 282:969-990(1998). RN [3] RP NUCLEOTIDE SEQUENCE. RC PLASMID=R751; RA Haines A.S., Thomas C.M.; RL Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; U67194; AAC64445.1; -; Genomic_DNA. DR PIR; T08501; T08501. DR RefSeq; NP_044242.1; NC_001735.4. DR TCDB; 3.A.7.4.1; the type iv (conjugal dna-protein transfer or virb) secretory pathway (ivsp) family. DR GeneID; 877466; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11778 MW; AEB8788F98161DEB CRC64; MALRAIPIRR AGNRENLFMG GDRELVMFSG LCGGALIFSA QEVRATVFGI ALWFGALFAL RLMAKADPKL RHVYLRHRRY KPYYPARSTP FRDNTPSQGK QYK // ID PTLB_BORBR Reviewed; 104 AA. AC Q7WDU2; DT 15-MAY-2007, integrated into UniProtKB/Swiss-Prot. DT 01-OCT-2003, sequence version 1. DT 14-MAY-2014, entry version 47. DE RecName: Full=Type IV secretion system protein PtlB homolog; GN Name=ptlB; OrderedLocusNames=BB4896; OS Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) OS (Alcaligenes bronchisepticus). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Alcaligenaceae; Bordetella. OX NCBI_TaxID=257310; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-588 / NCTC 13252 / RB50; RX PubMed=12910271; DOI=10.1038/ng1227; RA Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., RA Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., RA Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., RA Achtman M., Atkin R., Baker S., Basham D., Bason N., Cherevach I., RA Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., RA Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., RA Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., RA Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., RA Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., RA Unwin L., Whitehead S., Barrell B.G., Maskell D.J.; RT "Comparative analysis of the genome sequences of Bordetella pertussis, RT Bordetella parapertussis and Bordetella bronchiseptica."; RL Nat. Genet. 35:32-40(2003). RN [2] RP TRANSCRIPTIONAL SILENCING. RC STRAIN=ATCC 4617 / NCIB 9935 / NCTC 8344 / NRRL B-140; RX PubMed=3584073; RA Arico B., Rappuoli R.; RT "Bordetella parapertussis and Bordetella bronchiseptica contain RT transcriptionally silent pertussis toxin genes."; RL J. Bacteriol. 169:2847-2853(1987). RN [3] RP POSSIBLE EXPRESSION OF PTL AND PTX PROTEINS UNDER CONDITIONS DIFFERENT RP FROM B.PERTUSSIS EXPRESSION CONDITIONS. RC STRAIN=ATCC 31437 / Bb55; RX PubMed=8926063; RA Hausman S.Z., Cherry J.D., Heininger U., Wirsing von Koenig C.H., RA Burns D.L.; RT "Analysis of proteins encoded by the ptx and ptl genes of Bordetella RT bronchiseptica and Bordetella parapertussis."; RL Infect. Immun. 64:4020-4026(1996). CC -!- SUBCELLULAR LOCATION: Cell membrane; Single-pass membrane protein CC (Potential). CC -!- SIMILARITY: Belongs to the virB3 family. CC -!- CAUTION: B.parapertussis and B.bronchiseptica seem not to produce CC the pertussis toxin (S1, S2, S4, S5 and S3) and ptl proteins CC (PtlA, PtlB, PtlC, PtlD, PtlE, PtlF, PtlG, PtlH and PtlI) in vivo CC due to changes in the promoter region of the ptx-ptl operon. CC However, it is possible that their promoter is active under CC certain, as-yet-undefined conditions and that B.parapertussis and CC B.bronchiseptica are therefore capable of producing these CC proteins. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; BX640451; CAE35259.1; -; Genomic_DNA. DR RefSeq; NP_891429.1; NC_002927.3. DR STRING; 257310.BB4896; -. DR EnsemblBacteria; CAE35259; CAE35259; BB4896. DR GeneID; 2663872; -. DR KEGG; bbr:BB4896; -. DR PATRIC; 21143290; VBIBorBro124907_4987. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K12079; -. DR OMA; FWGASSY; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BBRO257310:BB4896-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 3: Inferred from homology; KW Cell membrane; Complete proteome; Membrane; Transmembrane; KW Transmembrane helix. FT CHAIN 1 104 Type IV secretion system protein PtlB FT homolog. FT /FTId=PRO_0000287407. FT TRANSMEM 30 50 Helical; (Potential). SQ SEQUENCE 104 AA; 12284 MW; 581DD0CA817164B4 CRC64; MRDPLFKGCT RPAMLMGVPA TPLAVCSGTI ALLGIWFSIA FLALFPVALL AMRIMIRRDD QQFRLIWLYL RMRWLSRDRT HAFWQSTVYA PLRYAERRQR LRKP // ID PTLB_BORPA Reviewed; 104 AA. AC Q7W2U4; DT 15-MAY-2007, integrated into UniProtKB/Swiss-Prot. DT 01-OCT-2003, sequence version 1. DT 14-MAY-2014, entry version 49. DE RecName: Full=Type IV secretion system protein PtlB homolog; GN Name=ptlB; OrderedLocusNames=BPP4310; OS Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Alcaligenaceae; Bordetella. OX NCBI_TaxID=257311; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=12822 / ATCC BAA-587 / NCTC 13253; RX PubMed=12910271; DOI=10.1038/ng1227; RA Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., RA Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., RA Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., RA Achtman M., Atkin R., Baker S., Basham D., Bason N., Cherevach I., RA Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., RA Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., RA Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., RA Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., RA Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., RA Unwin L., Whitehead S., Barrell B.G., Maskell D.J.; RT "Comparative analysis of the genome sequences of Bordetella pertussis, RT Bordetella parapertussis and Bordetella bronchiseptica."; RL Nat. Genet. 35:32-40(2003). RN [2] RP TRANSCRIPTIONAL SILENCING. RC STRAIN=ATCC 9305; RX PubMed=3584073; RA Arico B., Rappuoli R.; RT "Bordetella parapertussis and Bordetella bronchiseptica contain RT transcriptionally silent pertussis toxin genes."; RL J. Bacteriol. 169:2847-2853(1987). RN [3] RP POSSIBLE EXPRESSION OF PTL AND PTX PROTEINS UNDER CONDITIONS DIFFERENT RP FROM B.PERTUSSIS EXPRESSION CONDITIONS. RC STRAIN=10978, and 13449; RX PubMed=8926063; RA Hausman S.Z., Cherry J.D., Heininger U., Wirsing von Koenig C.H., RA Burns D.L.; RT "Analysis of proteins encoded by the ptx and ptl genes of Bordetella RT bronchiseptica and Bordetella parapertussis."; RL Infect. Immun. 64:4020-4026(1996). CC -!- SUBCELLULAR LOCATION: Cell membrane; Single-pass membrane protein CC (Potential). CC -!- SIMILARITY: Belongs to the virB3 family. CC -!- CAUTION: B.parapertussis and B.bronchiseptica seem not to produce CC the pertussis toxin (S1, S2, S4, S5 and S3) and ptl proteins CC (PtlA, PtlB, PtlC, PtlD, PtlE, PtlF, PtlG, PtlH and PtlI) in vivo CC due to changes in the promoter region of the ptx-ptl operon. CC However, it is possible that their promoter is active under CC certain, as-yet-undefined conditions and that B.parapertussis and CC B.bronchiseptica are therefore capable of producing these CC proteins. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; BX640436; CAE39588.1; -; Genomic_DNA. DR RefSeq; NP_886437.1; NC_002928.3. DR STRING; 257311.BPP4310; -. DR EnsemblBacteria; CAE39588; CAE39588; BPP4310. DR GeneID; 1665676; -. DR KEGG; bpa:BPP4310; -. DR PATRIC; 21152735; VBIBorPar43418_4522. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K12079; -. DR OMA; FWGASSY; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BPAR257311:BPP4310-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 3: Inferred from homology; KW Cell membrane; Complete proteome; Membrane; Transmembrane; KW Transmembrane helix. FT CHAIN 1 104 Type IV secretion system protein PtlB FT homolog. FT /FTId=PRO_0000287408. FT TRANSMEM 30 50 Helical; (Potential). SQ SEQUENCE 104 AA; 12312 MW; 581DD0CA8173B4B4 CRC64; MRDPLFKGCT RPAMLMGVPA TPLAVCSGTI ALLGIWFSIA FLALFPVALL AMRIMIRRDD QQFRLIWLYL RMRWLSRDRT HAFWQSTVYA PLRYAERRRR LRKP // ID PTLB_BORPE Reviewed; 104 AA. AC Q45391; DT 28-NOV-2006, integrated into UniProtKB/Swiss-Prot. DT 01-NOV-1996, sequence version 1. DT 14-MAY-2014, entry version 67. DE RecName: Full=Type IV secretion system protein PtlB; DE AltName: Full=Pertussis toxin liberation protein B; GN Name=ptlB; OrderedLocusNames=BP3789; OS Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Alcaligenaceae; Bordetella. OX NCBI_TaxID=257313; RN [1] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA]. RC STRAIN=BP165; RX PubMed=2873570; DOI=10.1073/pnas.83.13.4631; RA Nicosia A., Perugini M., Franzini C., Casagli M.C., Borri M.G., RA Antoni G., Almoni M., Neri P., Ratti G., Rappuoli R.; RT "Cloning and sequencing of the pertussis toxin genes: operon structure RT and gene duplication."; RL Proc. Natl. Acad. Sci. U.S.A. 83:4631-4635(1986). RN [2] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND FUNCTION. RC STRAIN=Tohama I / BP338; RX PubMed=8464913; DOI=10.1073/pnas.90.7.2970; RA Weiss A.A., Johnson F.D., Burns D.L.; RT "Molecular characterization of an operon required for pertussis toxin RT secretion."; RL Proc. Natl. Acad. Sci. U.S.A. 90:2970-2974(1993). RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Tohama I / ATCC BAA-589 / NCTC 13251; RX PubMed=12910271; DOI=10.1038/ng1227; RA Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., RA Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., RA Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., RA Achtman M., Atkin R., Baker S., Basham D., Bason N., Cherevach I., RA Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., RA Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., RA Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., RA Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., RA Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., RA Unwin L., Whitehead S., Barrell B.G., Maskell D.J.; RT "Comparative analysis of the genome sequences of Bordetella pertussis, RT Bordetella parapertussis and Bordetella bronchiseptica."; RL Nat. Genet. 35:32-40(2003). RN [4] RP REGULATION BY BVGS/BVGA. RC STRAIN=Tohama I / ATCC BAA-589 / NCTC 13251; RX PubMed=7592424; RA Boucher P.E., Stibitz S.; RT "Synergistic binding of RNA polymerase and BvgA phosphate to the RT pertussis toxin promoter of Bordetella pertussis."; RL J. Bacteriol. 177:6486-6491(1995). RN [5] RP COTRANSCRIPTION WITH PTX. RC STRAIN=Wellcome 28; RX PubMed=8606119; RA Ricci S., Rappuoli R., Scarlato V.; RT "The pertussis toxin liberation genes of Bordetella pertussis are RT transcriptionally linked to the pertussis toxin operon."; RL Infect. Immun. 64:1458-1460(1996). RN [6] RP FUNCTION. RC STRAIN=Tohama I / BP338; RX PubMed=10518754; DOI=10.1111/j.1574-6968.1999.tb08766.x; RA Craig-Mylius K.A., Weiss A.A.; RT "Mutants in the ptlA-H genes of Bordetella pertussis are deficient for RT pertussis toxin secretion."; RL FEMS Microbiol. Lett. 179:479-484(1999). RN [7] RP FUNCTION. RC STRAIN=Tohama I / BP338; RX PubMed=15322034; DOI=10.1128/IAI.72.9.5365-5372.2004; RA Burns D.L., Fiddner S., Cheung A.M., Verma A.; RT "Analysis of subassemblies of pertussis toxin subunits in vivo and RT their interaction with the ptl transport apparatus."; RL Infect. Immun. 72:5365-5372(2004). CC -!- FUNCTION: Component of the type IV secretion system ptl required CC for secretion of assembled pertussis toxin (PTX) through the outer CC membrane. CC -!- SUBCELLULAR LOCATION: Cell membrane; Single-pass membrane protein CC (Potential). CC -!- INDUCTION: Cotranscribed with ptxABCDE. Activated by the two- CC component regulatory system BvgS/BvgA. CC -!- SIMILARITY: Belongs to the virB3 family. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; M14378; AAA83986.1; -; Genomic_DNA. DR EMBL; L10720; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; BX640422; CAE44044.1; -; Genomic_DNA. DR PIR; A47301; A47301. DR RefSeq; NP_882288.1; NC_002929.2. DR STRING; 257313.BP3789; -. DR TCDB; 3.A.7.3.1; the type iv (conjugal dna-protein transfer or virb) secretory pathway (ivsp) family. DR EnsemblBacteria; CAE44044; CAE44044; BP3789. DR GeneID; 2665410; -. DR KEGG; bpe:BP3789; -. DR PATRIC; 21161258; VBIBorPer7866_4093. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K12079; -. DR OMA; FWGASSY; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BPER257313:BP3789-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. DR GO; GO:0006810; P:transport; IEA:UniProtKB-KW. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 2: Evidence at transcript level; KW Cell membrane; Complete proteome; Membrane; Reference proteome; KW Transmembrane; Transmembrane helix; Transport. FT CHAIN 1 104 Type IV secretion system protein PtlB. FT /FTId=PRO_0000262573. FT TRANSMEM 30 50 Helical; (Potential). SQ SEQUENCE 104 AA; 12312 MW; 581DD0CA8173B4B4 CRC64; MRDPLFKGCT RPAMLMGVPA TPLAVCSGTI ALLGIWFSIA FLALFPVALL AMRIMIRRDD QQFRLIWLYL RMRWLSRDRT HAFWQSTVYA PLRYAERRRR LRKP // ID Q07GT0_ROSDO Unreviewed; 91 AA. AC Q07GT0; DT 31-OCT-2006, integrated into UniProtKB/TrEMBL. DT 31-OCT-2006, sequence version 1. DT 14-MAY-2014, entry version 33. DE SubName: Full=Type IV secretion system protein, putative; GN OrderedLocusNames=RD1_A0015; OS Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter OS sp. (strain OCh 114)) (Roseobacter denitrificans). OG Plasmid pTB1. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Roseobacter. OX NCBI_TaxID=375451; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 33942 / OCh 114; PLASMID=pTB1; RX PubMed=17098896; DOI=10.1128/JB.01390-06; RA Swingley W.D., Sadekar S., Mastrian S.D., Matthies H.J., Hao J., RA Ramos H., Acharya C.R., Conrad A.L., Taylor H.L., Dejesa L.C., RA Shah M.K., O'huallachain M.E., Lince M.T., Blankenship R.E., RA Beatty J.T., Touchman J.W.; RT "The complete genome sequence of Roseobacter denitrificans reveals a RT mixotrophic rather than photosynthetic metabolism."; RL J. Bacteriol. 189:683-690(2007). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000464; ABI93319.1; -; Genomic_DNA. DR RefSeq; YP_771727.1; NC_008386.1. DR STRING; 375451.RD1_A0015; -. DR EnsemblBacteria; ABI93319; ABI93319; RD1_A0015. DR GeneID; 4311956; -. DR KEGG; rde:RD1_A0015; -. DR PATRIC; 23366458; VBIRosDen86677_4093. DR eggNOG; bactNOG79204; -. DR HOGENOM; HOG000118136; -. DR KO; K03198; -. DR OrthoDB; EOG6ND0NX; -. DR BioCyc; RDEN375451:GJIZ-4022-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 91 AA; 9979 MW; CEB3656EECCF3702 CRC64; MQNPCFKALT RPVSFLGLPF KFVVILAIVC FGGFIATLSF VYLLLSALIG YGALRLLSAY DPMIIDVIFV ALSKTPLPPS YFKGKGIIYR A // ID Q07JD6_RHOP5 Unreviewed; 93 AA. AC Q07JD6; DT 31-OCT-2006, integrated into UniProtKB/TrEMBL. DT 31-OCT-2006, sequence version 1. DT 14-MAY-2014, entry version 34. DE SubName: Full=Type IV secretory pathway, VirB3 family protein; GN OrderedLocusNames=RPE_4022; OS Rhodopseudomonas palustris (strain BisA53). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Rhodopseudomonas. OX NCBI_TaxID=316055; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BisA53; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., RA Larimer F., Land M., Hauser L., Pelletier D.A., Kyrpides N., Kim E., RA Harwood C.S., Oda Y., Richardson P.; RT "Complete sequence of Rhodopseudomonas palustris BisA53."; RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000463; ABJ07948.1; -; Genomic_DNA. DR RefSeq; YP_782928.1; NC_008435.1. DR STRING; 316055.RPE_4022; -. DR EnsemblBacteria; ABJ07948; ABJ07948; RPE_4022. DR GeneID; 4361714; -. DR KEGG; rpe:RPE_4022; -. DR PATRIC; 23262688; VBIRhoPal93214_4074. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; AVWATKR; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; RPAL316055:GHR9-4061-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9815 MW; 41DEF20442BBB966 CRC64; MDTPATAEQP IAGFVVPVHR ALTEPILLGG APRAVAILNG TLAAALGLGL RLWLAGLVLW VIGHGAAVWA TKRDPQFVDV VRRHLRISGH LSV // ID Q08KZ9_BORPT Unreviewed; 103 AA. AC Q08KZ9; DT 31-OCT-2006, integrated into UniProtKB/TrEMBL. DT 31-OCT-2006, sequence version 1. DT 14-MAY-2014, entry version 16. DE SubName: Full=TrbD; GN Name=trbD; OS Bordetella pertussis. OG Plasmid pBP136. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Alcaligenaceae; Bordetella. OX NCBI_TaxID=520; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=BP136; PLASMID=pBP136; RA Kamachi K., Sota M., Tamai Y., Nagata N., Konda T., Inoue T., RA Top E.M., Arakawa Y.; RT "Plasmid pBP136 from Bordetella pertussis represents an ancestral form RT of IncP-1 plasmids without accessory mobile elements."; RL Microbiology (Mosc.) 152:3477-3484(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AB237782; BAF33459.1; -; Genomic_DNA. DR RefSeq; YP_787940.1; NC_008459.1. DR GeneID; 4364092; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11802 MW; 8F4CEDEE6B161847 CRC64; MALRAIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QEVRATVFGI ALWFGALFAL RLMAKADPKL RHVYLRHRRY KPYYPARSTP FRDNTPSQGK QYK // ID Q09J81_WOLPI Unreviewed; 98 AA. AC Q09J81; DT 17-OCT-2006, integrated into UniProtKB/TrEMBL. DT 17-OCT-2006, sequence version 1. DT 08-MAR-2011, entry version 9. DE SubName: Full=Vir-like protein B3; OS Wolbachia pipientis. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=955; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=WAtab3, and WRi; RX PubMed=18502862; DOI=10.1128/JB.00377-08; RA Rances E., Voronin D., Tran-Van V., Mavingui P.; RT "Genetic and functional characterization of the type IV secretion RT system in Wolbachia."; RL J. Bacteriol. 190:5020-5030(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DQ887630; ABI50363.1; -; Genomic_DNA. DR EMBL; EF423641; ABO40496.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10924 MW; 1342D706E24869DB CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INSNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIA // ID Q0ACT2_NITEC Unreviewed; 106 AA. AC Q0ACT2; DT 17-OCT-2006, integrated into UniProtKB/TrEMBL. DT 17-OCT-2006, sequence version 1. DT 16-APR-2014, entry version 38. DE SubName: Full=Type IV secretory pathway, VirB3 family protein; GN OrderedLocusNames=Neut_2637; OS Nitrosomonas eutropha (strain C91). OG Plasmid pNeutP2. OC Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; OC Nitrosomonadaceae; Nitrosomonas. OX NCBI_TaxID=335283; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=C91; RX PubMed=17991028; DOI=10.1111/j.1462-2920.2007.01409.x; RA Stein L.Y., Arp D.J., Berube P.M., Chain P.S., Hauser L., Jetten M.S., RA Klotz M.G., Larimer F.W., Norton J.M., Op den Camp H.J., Shin M., RA Wei X.; RT "Whole-genome analysis of the ammonia-oxidizing bacterium, RT Nitrosomonas eutropha C91: implications for niche adaptation."; RL Environ. Microbiol. 9:2993-3007(2007). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000452; ABI60839.1; -; Genomic_DNA. DR RefSeq; YP_743817.1; NC_008342.1. DR STRING; 335283.Neut_2637; -. DR EnsemblBacteria; ABI60839; ABI60839; Neut_2637. DR GeneID; 4271808; -. DR KEGG; net:Neut_2637; -. DR PATRIC; 22716862; VBINitEut7577_0119. DR eggNOG; NOG295420; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; IVGTHIL; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; NEUT335283:GHT6-2682-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 106 AA; 12159 MW; F29888FE2C322FDD CRC64; MDSRDRVFKG ATRPPMMFGI PIVPFILIVG THILVALWSF VLLSGFVSVA VFVLLAFIIV VLRQVNADDN FKLAQTFMYF RDIGHRTNKH YWGTHSMGPV TYKKRK // ID Q0AD15_NITEC Unreviewed; 105 AA. AC Q0AD15; DT 17-OCT-2006, integrated into UniProtKB/TrEMBL. DT 17-OCT-2006, sequence version 1. DT 14-MAY-2014, entry version 40. DE SubName: Full=Conjugal transfer TrbD family protein; GN OrderedLocusNames=Neut_2553; OS Nitrosomonas eutropha (strain C91). OG Plasmid pNeutP1. OC Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; OC Nitrosomonadaceae; Nitrosomonas. OX NCBI_TaxID=335283; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=C91; RX PubMed=17991028; DOI=10.1111/j.1462-2920.2007.01409.x; RA Stein L.Y., Arp D.J., Berube P.M., Chain P.S., Hauser L., Jetten M.S., RA Klotz M.G., Larimer F.W., Norton J.M., Op den Camp H.J., Shin M., RA Wei X.; RT "Whole-genome analysis of the ammonia-oxidizing bacterium, RT Nitrosomonas eutropha C91: implications for niche adaptation."; RL Environ. Microbiol. 9:2993-3007(2007). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000451; ABI60756.1; -; Genomic_DNA. DR RefSeq; YP_743734.1; NC_008341.1. DR STRING; 335283.Neut_2553; -. DR EnsemblBacteria; ABI60756; ABI60756; Neut_2553. DR GeneID; 4271755; -. DR KEGG; net:Neut_2553; -. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; LRMMAKS; -. DR OrthoDB; EOG6N6849; -. DR BioCyc; NEUT335283:GHT6-2598-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 105 AA; 12172 MW; BE8F5021CC5D196B CRC64; MAQSVDKKRK TAFHRALHRP QQIMGGEREL MLFSMLIAGT LVITAMNWVA TAIGLFVWTL CIYGLRRMAK ADPEMSKIYL RQLRYGVYYG PFSKYSRVSK SSRNY // ID Q0B0Z7_BURCM Unreviewed; 103 AA. AC Q0B0Z7; DT 17-OCT-2006, integrated into UniProtKB/TrEMBL. DT 17-OCT-2006, sequence version 1. DT 14-MAY-2014, entry version 36. DE SubName: Full=Conjugal transfer TrbD family protein; DE Flags: Precursor; GN OrderedLocusNames=Bamb_6633; OS Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia OS cepacia (strain AMMD)). OG Plasmid pAMMD-1. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia; Burkholderia cepacia complex. OX NCBI_TaxID=339670; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-244 / AMMD; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., RA Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., RA Land M., Hauser L., Kyrpides N., Kim E., Parke J., Coenye T., RA Konstantinidis K., Ramette A., Tiedje J., Richardson P.; RT "Complete sequence of plasmid 1 of Burkholderia cepacia AMMD."; RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000443; ABI92176.1; -; Genomic_DNA. DR RefSeq; YP_771710.1; NC_008385.1. DR STRING; 339670.Bamb_6633; -. DR EnsemblBacteria; ABI92176; ABI92176; Bamb_6633. DR GeneID; 4308467; -. DR KEGG; bam:Bamb_6633; -. DR PATRIC; 19015423; VBIBurAmb61564_0044. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; LRMMAKS; -. DR OrthoDB; EOG6N6849; -. DR BioCyc; BAMB339670:GH48-6715-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 103 AA; 11802 MW; 8F4CEDEE6B161847 CRC64; MALRAIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QEVRATVFGI ALWFGALFAL RLMAKADPKL RHVYLRHRRY KPYYPARSTP FRDNTPSQGK QYK // ID Q0BE61_BURCM Unreviewed; 94 AA. AC Q0BE61; DT 17-OCT-2006, integrated into UniProtKB/TrEMBL. DT 17-OCT-2006, sequence version 1. DT 14-MAY-2014, entry version 39. DE SubName: Full=Putative conjugal transfer trbD transmembrane protein; GN OrderedLocusNames=Bamb_2006; OS Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia OS cepacia (strain AMMD)). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia; Burkholderia cepacia complex. OX NCBI_TaxID=339670; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-244 / AMMD; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., RA Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., RA Land M., Hauser L., Kyrpides N., Kim E., Parke J., Coenye T., RA Konstantinidis K., Ramette A., Tiedje J., Richardson P.; RT "Complete sequence of chromosome 1 of Burkholderia cepacia AMMD."; RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000440; ABI87562.1; -; Genomic_DNA. DR RefSeq; YP_773896.1; NC_008390.1. DR STRING; 339670.Bamb_2006; -. DR EnsemblBacteria; ABI87562; ABI87562; Bamb_2006. DR GeneID; 4309048; -. DR KEGG; bam:Bamb_2006; -. DR PATRIC; 19019632; VBIBurAmb61564_2100. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; PGLVLWI; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; BAMB339670:GH48-2054-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 94 AA; 9928 MW; 54D9A70E7B9F8E14 CRC64; MTAANEGAPA FASGFEIPLH RSLTEPILLG GAPRTVAIAN GTLAAAVGLG LQLWIPGVVL WIVGHSLAVW GARVDPQFMQ VFARHIKHKP LLDV // ID Q0E6E8_PSEAI Unreviewed; 103 AA. AC Q0E6E8; DT 17-OCT-2006, integrated into UniProtKB/TrEMBL. DT 17-OCT-2006, sequence version 1. DT 14-MAY-2014, entry version 16. DE SubName: Full=TrbD protein; GN Name=trbD; OS Pseudomonas aeruginosa. OG Plasmid pBS228. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. OX NCBI_TaxID=287; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pBS228; RX PubMed=17320955; DOI=10.1016/j.plasmid.2007.01.001; RA Haines A.S., Jones K., Batt S., Thomas C.M.; RT "Sequence of plasmid pBS228 and reconstruction of the IncP-1alpha RT phylogeny."; RL Plasmid 58:76-83(2007). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM261760; CAK12667.1; -; Genomic_DNA. DR RefSeq; YP_758660.1; NC_008357.1. DR GeneID; 4290887; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 12085 MW; C1D63A178E30DEF7 CRC64; MALRTIPIRR AGNRENLFMG GDRELVMFSG LMAFALIFSA QELRATVVGL ILWFGALYAF RIMAKADPKM RFVYLRHRRY KPYYPARSTP FRENTNSQGK QYR // ID Q0FXR8_9RHIZ Unreviewed; 92 AA. AC Q0FXR8; DT 17-OCT-2006, integrated into UniProtKB/TrEMBL. DT 17-OCT-2006, sequence version 1. DT 19-FEB-2014, entry version 10. DE SubName: Full=Uncharacterized protein; GN ORFNames=FP2506_00335; OS Fulvimarina pelagi HTCC2506. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Aurantimonadaceae; Fulvimarina. OX NCBI_TaxID=314231; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=HTCC2506; RX PubMed=20639329; DOI=10.1128/JB.00761-10; RA Kang I., Oh H.M., Lim S.I., Ferriera S., Giovannoni S.J., Cho J.C.; RT "Genome sequence of Fulvimarina pelagi HTCC2506T, a Mn(II)-oxidizing RT alphaproteobacterium possessing an aerobic anoxygenic photosynthetic RT gene cluster and Xanthorhodopsin."; RL J. Bacteriol. 192:4798-4799(2010). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AATP01000012; EAU39815.1; -; Genomic_DNA. DR EnsemblBacteria; EAU39815; EAU39815; FP2506_00335. DR PATRIC; 27668206; VBIFulPel16688_3693. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 92 AA; 10327 MW; D2132A9683F9AB64 CRC64; MAEQSPVYLG LVRPAKLLGL PMMYAMVWLF ASVLLFLWIQ SWIVLALSAL AYPAIWKAAD WDPHFLDVVA VSLQETRPTP NRSRHGGDSY AP // ID Q0KKJ9_9BACT Unreviewed; 114 AA. AC Q0KKJ9; DT 03-OCT-2006, integrated into UniProtKB/TrEMBL. DT 03-OCT-2006, sequence version 1. DT 14-MAY-2014, entry version 17. DE SubName: Full=VirB3 type IV secretion protein; GN Name=virB3; OS uncultured bacterium. OG Plasmid pLB1. OC Bacteria; environmental samples. OX NCBI_TaxID=77133; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pLB1; RX PubMed=16963556; DOI=10.1128/AEM.01531-06; RA Miyazaki R., Sato Y., Ito M., Ohtsubo Y., Nagata Y., Tsuda M.; RT "Complete nucleotide sequence of an exogenously isolated plasmid, RT pLB1, involved in gamma-hexachlorocyclohexane degradation."; RL Appl. Environ. Microbiol. 72:6923-6933(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AB244976; BAF30472.1; -; Genomic_DNA. DR RefSeq; YP_740345.1; NC_008330.1. DR GeneID; 4290939; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 114 AA; 12304 MW; DEFB07D9EA0DDCFA CRC64; MDGQEEMTKD PLFLAVTRPA LWAGVPIEAG ALIIMAGAIT LVGSGNPLYG GAAAVALYAM ARLIVRHDVN AFRLIFLWGR TKAANRNRVF WGGSSYTPLP LYGIKRKGFG RGVR // ID Q0ZKR4_ECOLX Unreviewed; 105 AA. AC Q0ZKR4; DT 22-AUG-2006, integrated into UniProtKB/TrEMBL. DT 22-AUG-2006, sequence version 1. DT 14-MAY-2014, entry version 40. DE SubName: Full=Conjugal transfer protein; DE SubName: Full=Conjugal transfer protein TraA; DE SubName: Full=Inner membrane protein forms channel for typeIV secretion of T-DNA complex, VirB3; DE SubName: Full=TraA; DE SubName: Full=TraA protein; DE SubName: Full=Uncharacterized protein; GN Name=traA; Synonyms=virB3; GN ORFNames=B634_00043, pec386IL_00155, pEcNDM0_00043, pHKU1_27, GN pKC394-022, pKC396-015, pN3_029; OS Escherichia coli. OG Plasmid IncN plasmid N3, Plasmid pE66An, Plasmid pEC386IL, OG Plasmid pECN580, Plasmid pEcNDM0, Plasmid pEcNDM1, Plasmid pHHA45, OG Plasmid pHKU1, Plasmid pKC394, Plasmid pKC396, Plasmid pKT58A, OG Plasmid pLEW517, Plasmid pNDM-BTR, Plasmid pQNR2078, and OG Plasmid pZS50. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=562; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=517-2H1; PLASMID=pLEW517; RX PubMed=16820486; DOI=10.1128/AEM.00354-06; RA Williams L.E., Detter C., Barry K., Lapidus A., Summers A.O.; RT "Facile recovery of individual high-molecular-weight, low-copy-number RT natural plasmids for genomic sequencing."; RL Appl. Environ. Microbiol. 72:4899-4906(2006). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ST131; PLASMID=pKC394, and pKC396; RX PubMed=20093380; DOI=10.1099/jmm.0.016188-0; RA Cullik A., Pfeifer Y., Prager R., von Baum H., Witte W.; RT "A novel IS26 structure surrounds blaCTX-M genes in different plasmids RT from German clinical Escherichia coli isolates."; RL J. Med. Microbiol. 59:580-587(2010). RN [3] RP NUCLEOTIDE SEQUENCE. RC STRAIN=345-2RifC; PLASMID=IncN plasmid N3; RA Aslett M.A.; RL Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases. RN [4] RP NUCLEOTIDE SEQUENCE. RC STRAIN=5509; PLASMID=pZS50; RA Garza-Ramos J.U., Barrios H., Silva-Sanchez J.; RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases. RN [5] RP NUCLEOTIDE SEQUENCE. RC STRAIN=2078; PLASMID=pQNR2078; RA Schwarz S.P.; RL Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases. RN [6] RP NUCLEOTIDE SEQUENCE. RC STRAIN=345-2RifC; PLASMID=IncN plasmid N3; RX PubMed=22475035; DOI=10.1186/1471-2180-12-53; RA Humphrey B., Thomson N.R., Thomas C.M., Brooks K., Sanders M., RA Delsol A.A., Roe J.M., Bennett P.M., Enne V.I.; RT "Fitness of Escherichia coli strains carrying expressed and partially RT silent IncN and IncP1 plasmids."; RL BMC Microbiol. 12:53-53(2012). RN [7] RP NUCLEOTIDE SEQUENCE. RC STRAIN=2078; PLASMID=pQNR2078; RX PubMed=22334601; DOI=10.1093/jac/dks024; RA Schink A.K., Kadlec K., Schwarz S.; RT "Detection of qnr genes among Escherichia coli isolates of animal RT origin and complete sequence of the conjugative qnrB19-carrying RT plasmid pQNR2078."; RL J. Antimicrob. Chemother. 67:1099-1102(2012). RN [8] RP NUCLEOTIDE SEQUENCE. RC STRAIN=5509; PLASMID=pZS50; RX PubMed=22514263; DOI=10.1093/jac/dks123; RA Garza-Ramos U., Barrios H., Hernandez-Vargas M.J., Rojas-Moreno T., RA Reyna-Flores F., Tinoco P., Othon V., Poirel L., Nordmann P., RA Cattoir V., Ruiz-Palacios G., Fernandez J.L., Santamaria R.I., RA Bustos P., Castro N., Silva-Sanchez J.; RT "Transfer of quinolone resistance gene qnrA1 to Escherichia coli RT through a 50 kb conjugative plasmid resulting from the splitting of a RT 300 kb plasmid."; RL J. Antimicrob. Chemother. 67:1627-1634(2012). RN [9] RP NUCLEOTIDE SEQUENCE. RC STRAIN=E66An; PLASMID=pE66An; RA Le V.; RL Submitted (OCT-2012) to the EMBL/GenBank/DDBJ databases. RN [10] RP NUCLEOTIDE SEQUENCE. RC STRAIN=HHA45, and KT58A; PLASMID=pHHA45, and pKT58A; RX PubMed=23060365; DOI=10.1093/jac/dks387; RA Dolejska M., Villa L., Hasman H., Hansen L., Carattoli A.; RT "Characterization of IncN plasmids carrying blaCTX-M-1 and qnr genes RT in Escherichia coli and Salmonella from animals, the environment and RT humans."; RL J. Antimicrob. Chemother. 68:333-339(2013). RN [11] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pHKU1; RX PubMed=23988630; DOI=10.1099/jmm.0.062653-0; RA Ho P.L., Chan J., Lo W.U., Lai E.L., Cheung Y.Y., Lau T.C., Chow K.H.; RT "Prevalence and molecular epidemiology of plasmid-mediated fosfomycin RT resistance genes among blood and urinary Escherichia coli isolates."; RL J. Med. Microbiol. 62:1707-1713(2013). RN [12] RP NUCLEOTIDE SEQUENCE. RC STRAIN=E66An; PLASMID=pE66An; RA Le T.M.V., Nguyen T.K.N., Campbell J.I., Schultsz C., RA Cerdeno-Tarraga A.M., Thomson N.R., Farrar J.J., Baker S.; RT "Annotation of 3 multi-drug resistance qnrS1 harbouring plasmids and a RT widespread of qnrS1-containing transposons circulating in RT Enterobacteriaceae in Ho Chi Minh City, Vietnam."; RL Submitted (JAN-2013) to the EMBL/GenBank/DDBJ databases. RN [13] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pEC386IL; RA Chmelnitsky I., Shklyar M., Leavitt A., Sadovsky E., Navon-Venezia S., RA Edgar R., Carmeli Y.; RT "KPC-2 encoding plasmids from Enterobacteriaceae in Israel."; RL Submitted (JUN-2013) to the EMBL/GenBank/DDBJ databases. RN [14] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pNDM-BTR; RA Wang L., Zhang Z., Kang H., Pei G., Xu X., Tong Y., Lu X.; RT "Complete sequence of pNDM-BTR plasmid from Escherichia coli strain RT isolated in China."; RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases. RN [15] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pHKU1; RA Ho P.-L., Chan J., Lo W.U., Cheung Y.Y., Law P.Y., Lai E., Chow K.H.; RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases. RN [16] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ECN580; PLASMID=pECN580; RX PubMed=24395232; RA Chen L., Hu H., Chavda K.D., Zhao S., Liu R., Liang H., Zhang W., RA Wang X., Jacobs M.R., Bonomo R.A., Kreiswirth B.N.; RT "Complete sequence of a KPC-producing IncN multidrug-resistant plasmid RT from an epidemic Escherichia coli ST131 strain in China."; RL Antimicrob. Agents Chemother. 0:0-0(2014). RN [17] RP NUCLEOTIDE SEQUENCE. RC STRAIN=EcNDM0, and EcNDM1; PLASMID=pEcNDM0, and pEcNDM1; RX PubMed=24594606; RA Li J., Lan R., Xiong Y., Ye C., Yuan M., Liu X., Chen X., Yu D., RA Liu B., Lin W., Bai X., Wang Y., Sun Q., Wang Y., Zhao H., Meng Q., RA Chen Q., Zhao A., Xu J.; RT "Sequential Isolation in a Patient of Raoultella planticola and RT Escherichia coli Bearing a Novel ISCR1 Element Carrying blaNDM-1."; RL PLoS ONE 9:E89893-E89893(2014). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DQ390454; ABG49210.1; -; Genomic_DNA. DR EMBL; HM138652; ADH29980.1; -; Genomic_DNA. DR EMBL; HM138653; ADH30030.1; -; Genomic_DNA. DR EMBL; JN566044; AEX55266.1; -; Genomic_DNA. DR EMBL; JX065630; AFP24956.1; -; Genomic_DNA. DR EMBL; JX065631; AFP25026.1; -; Genomic_DNA. DR EMBL; JX469383; AGO88818.1; -; Genomic_DNA. DR EMBL; JX515587; AGO88899.1; -; Genomic_DNA. DR EMBL; KF182187; AGP03413.1; -; Genomic_DNA. DR EMBL; KC960485; AGW00968.1; -; Genomic_DNA. DR EMBL; KF534788; AGW01220.1; -; Genomic_DNA. DR EMBL; KF914891; AHI13646.1; -; Genomic_DNA. DR EMBL; FR850039; CCA62531.1; -; Genomic_DNA. DR EMBL; HE613857; CCE73946.1; -; Genomic_DNA. DR EMBL; HF545433; CCN79897.1; -; Genomic_DNA. DR RefSeq; YP_001096371.1; NC_009132.1. DR RefSeq; YP_003717494.1; NC_014231.1. DR RefSeq; YP_004558199.1; NC_015599.1. DR RefSeq; YP_006903007.1; NC_019033.1. DR RefSeq; YP_006953635.1; NC_019082.1. DR RefSeq; YP_006953720.1; NC_019087.1. DR RefSeq; YP_006954489.1; NC_019098.1. DR RefSeq; YP_007349464.1; NC_020086.1. DR RefSeq; YP_008396560.1; NC_021997.1. DR RefSeq; YP_008574842.1; NC_022374.1. DR RefSeq; YP_008574952.1; NC_022375.1. DR GeneID; 10752098; -. DR GeneID; 13897323; -. DR GeneID; 13906570; -. DR GeneID; 13906666; -. DR GeneID; 13909217; -. DR GeneID; 15152847; -. DR GeneID; 16489594; -. DR GeneID; 17035657; -. DR GeneID; 17035746; -. DR GeneID; 4924696; -. DR GeneID; 9284738; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 105 AA; 12264 MW; BD45A3DAAC64DAF5 CRC64; MFVDGKRPLF KGATRLPRAL GVPRNVAMMI FMISASLFMI IHMWAILVFV FLWIPSAALT KYDDRMFRIM GLWLKTKFSN WFDSPFKQWG GSSYSSVDYK RKGLK // ID Q11BK5_MESSB Unreviewed; 93 AA. AC Q11BK5; DT 22-AUG-2006, integrated into UniProtKB/TrEMBL. DT 22-AUG-2006, sequence version 1. DT 14-MAY-2014, entry version 40. DE SubName: Full=Conjugal transfer protein; GN OrderedLocusNames=Meso_3853; OS Mesorhizobium sp. (strain BNC1). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Phyllobacteriaceae; Chelativorans. OX NCBI_TaxID=266779; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BNC1; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., RA Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Mikhailova N., Richardson P.; RT "Complete sequence of chromosome of Mesorhizobium sp. BNC1."; RL Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000390; ABG65220.1; -; Genomic_DNA. DR RefSeq; YP_676385.1; NC_008254.1. DR STRING; 266779.Meso_3853; -. DR EnsemblBacteria; ABG65220; ABG65220; Meso_3853. DR GeneID; 4182444; -. DR KEGG; mes:Meso_3853; -. DR PATRIC; 21348082; VBICheSp72577_4641. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; PGLVLWI; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; CSP266779:GI09-3916-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9988 MW; 34A207C1E367534D CRC64; MNGLGDHTGP IAGFFAPVHR SLTEPILLGG APRAVAIANG TIAAAIALGL RLWLAGLVIW AIGHFAAVWA ARRDAQFMDV TRRHLRYPSF MRA // ID Q11FW5_MESSB Unreviewed; 93 AA. AC Q11FW5; DT 22-AUG-2006, integrated into UniProtKB/TrEMBL. DT 22-AUG-2006, sequence version 1. DT 14-MAY-2014, entry version 39. DE SubName: Full=Conjugal transfer protein trbB; GN OrderedLocusNames=Meso_2322; OS Mesorhizobium sp. (strain BNC1). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Phyllobacteriaceae; Chelativorans. OX NCBI_TaxID=266779; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BNC1; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., RA Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Mikhailova N., Richardson P.; RT "Complete sequence of chromosome of Mesorhizobium sp. BNC1."; RL Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000390; ABG63710.1; -; Genomic_DNA. DR RefSeq; YP_674875.1; NC_008254.1. DR STRING; 266779.Meso_2322; -. DR EnsemblBacteria; ABG63710; ABG63710; Meso_2322. DR GeneID; 4180052; -. DR KEGG; mes:Meso_2322; -. DR PATRIC; 21344808; VBICheSp72577_3024. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; ALTEHIM; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; CSP266779:GI09-2360-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9888 MW; 2246EA05666DF153 CRC64; MAGVLEQAAE VPGFTVPVHR ALTEHILLGG APRSIAIMNG TLAGAVGLGL RLWLVGLAIW AIGHFAAVWA ARRDPLFVEV GRRHLRIPGH LTV // ID Q11L15_MESSB Unreviewed; 93 AA. AC Q11L15; DT 22-AUG-2006, integrated into UniProtKB/TrEMBL. DT 22-AUG-2006, sequence version 1. DT 14-MAY-2014, entry version 40. DE SubName: Full=Conjugal transfer protein trbB; GN OrderedLocusNames=Meso_0507; OS Mesorhizobium sp. (strain BNC1). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Phyllobacteriaceae; Chelativorans. OX NCBI_TaxID=266779; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BNC1; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., RA Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Mikhailova N., Richardson P.; RT "Complete sequence of chromosome of Mesorhizobium sp. BNC1."; RL Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000390; ABG61910.1; -; Genomic_DNA. DR RefSeq; YP_673075.1; NC_008254.1. DR STRING; 266779.Meso_0507; -. DR EnsemblBacteria; ABG61910; ABG61910; Meso_0507. DR GeneID; 4182125; -. DR KEGG; mes:Meso_0507; -. DR PATRIC; 21340906; VBICheSp72577_1098. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; WAIGHIA; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; CSP266779:GI09-514-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9940 MW; 21B5299C3146E3A4 CRC64; MAGLLHHPDE VAGFSVPVHR ALTEQILLGG APRSIAIMNG TLAGAVGLGL RLWLVGLLIW AIGHFAAVWA AKRDPLFVEV GRRHLRIPGH LSV // ID Q11MQ2_MESSB Unreviewed; 112 AA. AC Q11MQ2; DT 22-AUG-2006, integrated into UniProtKB/TrEMBL. DT 22-AUG-2006, sequence version 1. DT 14-MAY-2014, entry version 39. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN OrderedLocusNames=Meso_4347; OS Mesorhizobium sp. (strain BNC1). OG Plasmid pBNC1-1. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Phyllobacteriaceae; Chelativorans. OX NCBI_TaxID=266779; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BNC1; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., RA Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Mikhailova N., Richardson P.; RT "Complete sequence of plasmid 1 of Mesorhizobium sp. BNC1."; RL Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000389; ABG61317.1; -; Genomic_DNA. DR RefSeq; YP_665964.1; NC_008242.1. DR STRING; 266779.Meso_4347; -. DR EnsemblBacteria; ABG61317; ABG61317; Meso_4347. DR GeneID; 4178831; -. DR KEGG; mes:Meso_4347; -. DR PATRIC; 21339243; VBICheSp72577_0275. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; HDHNMFR; -. DR OrthoDB; EOG6VMTNS; -. DR BioCyc; CSP266779:GI09-4419-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 112 AA; 12536 MW; 080DEA0E37922822 CRC64; MTERIALEED TLFLACTRPA MIGGVTMEAM GINMIFTTIL FIVAGSVAYA LVGLVFHVIF KAIVKHDHNM FRVLLGWIET RGRTRNSGFW GGSSLTPMKL VRRYDERDLG LA // ID Q11N46_MESSB Unreviewed; 99 AA. AC Q11N46; DT 22-AUG-2006, integrated into UniProtKB/TrEMBL. DT 22-AUG-2006, sequence version 1. DT 14-MAY-2014, entry version 39. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN OrderedLocusNames=Meso_4178; OS Mesorhizobium sp. (strain BNC1). OG Plasmid pBNC1-1. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Phyllobacteriaceae; Chelativorans. OX NCBI_TaxID=266779; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BNC1; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., RA Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Mikhailova N., Richardson P.; RT "Complete sequence of plasmid 1 of Mesorhizobium sp. BNC1."; RL Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000389; ABG61162.1; -; Genomic_DNA. DR RefSeq; YP_665809.1; NC_008242.1. DR STRING; 266779.Meso_4178; -. DR EnsemblBacteria; ABG61162; ABG61162; Meso_4178. DR GeneID; 4178774; -. DR KEGG; mes:Meso_4178; -. DR PATRIC; 21338861; VBICheSp72577_0085. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; FHELMLA; -. DR OrthoDB; EOG6ND0NX; -. DR BioCyc; CSP266779:GI09-4247-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 99 AA; 11221 MW; 0D99812AD7E62F04 CRC64; MVEVTDEKPH LTPLVIGLTR PPMMWGIPLN AFYIIVGVTL IAFLVSGSFW SALIAPLTYL ALFAFCSRDI RILDLAQVVG RRTPRTRNRL FWRTNSYGP // ID Q11ZH2_POLSJ Unreviewed; 99 AA. AC Q11ZH2; DT 22-AUG-2006, integrated into UniProtKB/TrEMBL. DT 22-AUG-2006, sequence version 1. DT 13-NOV-2013, entry version 27. DE SubName: Full=Type IV secretory pathway, VirB3-like; GN OrderedLocusNames=Bpro_5466; OS Polaromonas sp. (strain JS666 / ATCC BAA-500). OG Plasmid pPOLSJ2. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Polaromonas. OX NCBI_TaxID=296591; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=JS666 / ATCC BAA-500; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Munk A.C., RA Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Anderson I., Richardson P.; RT "Complete sequence of plasmid 2 of Polaromonas sp. JS666."; RL Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000318; ABE47320.1; -; Genomic_DNA. DR RefSeq; YP_552218.1; NC_007950.1. DR STRING; 296591.Bpro_5466; -. DR EnsemblBacteria; ABE47320; ABE47320; Bpro_5466. DR GeneID; 4016425; -. DR KEGG; pol:Bpro_5466; -. DR PATRIC; 22964116; VBIPolSp102244_5502. DR eggNOG; NOG271836; -. DR KO; K03198; -. DR OrthoDB; EOG63NMRB; -. DR BioCyc; PSP296591:GHI4-217-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 99 AA; 11302 MW; 7F67096FFF6984DE CRC64; MRASLIHSSL NRRRAVMGVP ITIFGVESLL LVLMLGGGMY AFLLILLPIH FSARWMHSRD DGAFEAMFTY MREQDVYDPW HRPATTTKRP AGYGKDLQC // ID Q120F3_POLSJ Unreviewed; 101 AA. AC Q120F3; DT 22-AUG-2006, integrated into UniProtKB/TrEMBL. DT 22-AUG-2006, sequence version 1. DT 01-MAY-2013, entry version 23. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=Bpro_5228; OS Polaromonas sp. (strain JS666 / ATCC BAA-500). OG Plasmid pPOLSJ1. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Polaromonas. OX NCBI_TaxID=296591; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=JS666 / ATCC BAA-500; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Munk A.C., RA Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., RA Anderson I., Richardson P.; RT "Complete sequence of plasmid 1 of Polaromonas sp. JS666."; RL Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000317; ABE47089.1; -; Genomic_DNA. DR RefSeq; YP_551987.1; NC_007949.1. DR STRING; 296591.Bpro_5228; -. DR EnsemblBacteria; ABE47089; ABE47089; Bpro_5228. DR GeneID; 4015955; -. DR KEGG; pol:Bpro_5228; -. DR PATRIC; 22963679; VBIPolSp102244_5284. DR BioCyc; PSP296591:GHI4-643-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 101 AA; 11592 MW; DB9186A10A39AF5F CRC64; MASRSSAFHQ SLQRSRLIMG IEKASFGGLV FASSFCLVAR SYWGVPIIVI LYLLAKWLTK RDGQFIEVFF KYLNEDHVYD ATPRLSDYKS RPKGWGKDLP L // ID Q13HT6_BURXL Unreviewed; 110 AA. AC Q13HT6; DT 22-AUG-2006, integrated into UniProtKB/TrEMBL. DT 22-AUG-2006, sequence version 1. DT 14-MAY-2014, entry version 30. DE SubName: Full=Putative type IV secretion system protein VirB3/TraD; GN ORFNames=Bxe_C0449; OS Burkholderia xenovorans (strain LB400). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia. OX NCBI_TaxID=266265; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=LB400; RX PubMed=17030797; DOI=10.1073/pnas.0606924103; RA Chain P.S., Denef V.J., Konstantinidis K.T., Vergez L.M., Agullo L., RA Reyes V.L., Hauser L., Cordova M., Gomez L., Gonzalez M., Land M., RA Lao V., Larimer F., LiPuma J.J., Mahenthiralingam E., Malfatti S.A., RA Marx C.J., Parnell J.J., Ramette A., Richardson P., Seeger M., RA Smith D., Spilker T., Sul W.J., Tsoi T.V., Ulrich L.E., Zhulin I.B., RA Tiedje J.M.; RT "Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp RT genome shaped for versatility."; RL Proc. Natl. Acad. Sci. U.S.A. 103:15280-15287(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000272; ABE36353.1; -; Genomic_DNA. DR RefSeq; YP_555703.1; NC_007953.1. DR STRING; 266265.Bxe_C0449; -. DR EnsemblBacteria; ABE36353; ABE36353; Bxe_C0449. DR GeneID; 4009963; -. DR KEGG; bxe:Bxe_C0449; -. DR PATRIC; 19341912; VBIBurXen52548_8214. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; FWGASSY; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BXEN266265:GJII-8103-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 110 AA; 12417 MW; 1AEA311FA943E986 CRC64; MSPRMNPLRD PVFKGCTRPA MLWGVPLVPF LMVGSSILIP AIWALLASPP VGVGIVLLLI PVFVTMRSIT RHDDQRLAQY ALCARMAIRQ RNRRFWGAHA YVPVRVKRRG // ID Q13XI7_BURXL Unreviewed; 106 AA. AC Q13XI7; DT 22-AUG-2006, integrated into UniProtKB/TrEMBL. DT 22-AUG-2006, sequence version 1. DT 14-MAY-2014, entry version 30. DE SubName: Full=Putative type IV secretion system protein VirB3/TraD; GN ORFNames=Bxe_A1755; OS Burkholderia xenovorans (strain LB400). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia. OX NCBI_TaxID=266265; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=LB400; RX PubMed=17030797; DOI=10.1073/pnas.0606924103; RA Chain P.S., Denef V.J., Konstantinidis K.T., Vergez L.M., Agullo L., RA Reyes V.L., Hauser L., Cordova M., Gomez L., Gonzalez M., Land M., RA Lao V., Larimer F., LiPuma J.J., Mahenthiralingam E., Malfatti S.A., RA Marx C.J., Parnell J.J., Ramette A., Richardson P., Seeger M., RA Smith D., Spilker T., Sul W.J., Tsoi T.V., Ulrich L.E., Zhulin I.B., RA Tiedje J.M.; RT "Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp RT genome shaped for versatility."; RL Proc. Natl. Acad. Sci. U.S.A. 103:15280-15287(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000270; ABE31202.1; -; Genomic_DNA. DR RefSeq; YP_559254.1; NC_007951.1. DR STRING; 266265.Bxe_A1755; -. DR EnsemblBacteria; ABE31202; ABE31202; Bxe_A1755. DR GeneID; 4004829; -. DR KEGG; bxe:Bxe_A1755; -. DR PATRIC; 19330946; VBIBurXen52548_2793. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BXEN266265:GJII-2774-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 106 AA; 12034 MW; FBCE1FB508F93DA2 CRC64; MKPLKDPVFK GATRPAMIWG VPLVAFLMVG GGMLIPAIWA LLASPPLGVA ILFLMIPVFV VMRMITRHDD QRLAQYLLRV RMVLRQGNRR FWGGHAYVPV RLKRRA // ID Q140D6_BURXL Unreviewed; 106 AA. AC Q140D6; DT 22-AUG-2006, integrated into UniProtKB/TrEMBL. DT 22-AUG-2006, sequence version 1. DT 14-MAY-2014, entry version 26. DE SubName: Full=Putative type IV secretion system protein VirB3/TraD; GN ORFNames=Bxe_A2656; OS Burkholderia xenovorans (strain LB400). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia. OX NCBI_TaxID=266265; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=LB400; RX PubMed=17030797; DOI=10.1073/pnas.0606924103; RA Chain P.S., Denef V.J., Konstantinidis K.T., Vergez L.M., Agullo L., RA Reyes V.L., Hauser L., Cordova M., Gomez L., Gonzalez M., Land M., RA Lao V., Larimer F., LiPuma J.J., Mahenthiralingam E., Malfatti S.A., RA Marx C.J., Parnell J.J., Ramette A., Richardson P., Seeger M., RA Smith D., Spilker T., Sul W.J., Tsoi T.V., Ulrich L.E., Zhulin I.B., RA Tiedje J.M.; RT "Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp RT genome shaped for versatility."; RL Proc. Natl. Acad. Sci. U.S.A. 103:15280-15287(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000270; ABE30303.1; -; Genomic_DNA. DR RefSeq; YP_558355.1; NC_007951.1. DR STRING; 266265.Bxe_A2656; -. DR EnsemblBacteria; ABE30303; ABE30303; Bxe_A2656. DR GeneID; 4005581; -. DR KEGG; bxe:Bxe_A2656; -. DR PATRIC; 19329018; VBIBurXen52548_1838. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; IVGTHIL; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BXEN266265:GJII-1827-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 106 AA; 12104 MW; C4950803786624C1 CRC64; MNPLKDPVFK GCTRPAMLWG VPLVLFLMVG GGMLIPAIWA LLASPPLGVA ILFLMIPVFV AMRVITRHDD QRLAQYVLRL RMVLRQGNRR FWGVHAYVPV RLKRRV // ID Q17U22_ECOLX Unreviewed; 103 AA. AC Q17U22; DT 25-JUL-2006, integrated into UniProtKB/TrEMBL. DT 25-JUL-2006, sequence version 1. DT 14-MAY-2014, entry version 18. DE SubName: Full=TraA; GN Name=traA; ORFNames=pMUR050_035; OS Escherichia coli. OG Plasmid pMUR050. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=562; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pMUR050; RX PubMed=15963296; RA Gonzalez-Zorn B., Teshager T., Casas M., Porrero M.C., Moreno M.A., RA Courvalin P., Dominguez L.; RT "armA and aminoglycoside resistance in Escherichia coli."; RL Emerg. Infect. Dis. 11:954-956(2005). RN [2] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pMUR050; RX PubMed=16027145; DOI=10.1093/jac/dki246; RA Gonzalez-Zorn B., Catalan A., Escudero J.A., Dominguez L., RA Teshager T., Porrero C., Moreno M.A.; RT "Genetic basis for dissemination of armA."; RL J. Antimicrob. Chemother. 56:583-585(2005). RN [3] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pMUR050; RA Gonzalez-Zorn B., Catalan A., Moreno M.A., Dominguez L.; RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AY522431; ABG33811.1; -; Genomic_DNA. DR RefSeq; YP_724492.1; NC_007682.3. DR GeneID; 3861266; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11782 MW; 39143DD437634FB6 CRC64; MFVDGKRPLF KGATRLPRAL GVPRNVAMMI FMISASLFMI IHMWAILVFV FLWIPSAALT KYDDRMFRIM GLWLKTNSVI GLILRLSSGE DRLIPLLTTN VRV // ID Q1BKX5_BURCA Unreviewed; 112 AA. AC Q1BKX5; DT 11-JUL-2006, integrated into UniProtKB/TrEMBL. DT 11-JUL-2006, sequence version 1. DT 14-MAY-2014, entry version 35. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN OrderedLocusNames=Bcen_4852; OS Burkholderia cenocepacia (strain AU 1054). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia; Burkholderia cepacia complex. OX NCBI_TaxID=331271; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=AU 1054; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., RA Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., LiPuma J.J., RA Konstantinidis K., Tiedje J.M., Richardson P.; RT "Complete sequence of chromosome 2 of Burkholderia cenocepacia AU RT 1054."; RL Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000379; ABF79730.1; -; Genomic_DNA. DR RefSeq; YP_624703.1; NC_008061.1. DR STRING; 331271.Bcen_4852; -. DR EnsemblBacteria; ABF79730; ABF79730; Bcen_4852. DR GeneID; 4095171; -. DR KEGG; bcn:Bcen_4852; -. DR PATRIC; 19053684; VBIBurCen11237_5047. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; FWGASSY; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BCEN331271:GHKX-4929-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 112 AA; 12582 MW; E13615E37CCC3680 CRC64; MNTELIVNTL SDPVFKGCTR PAMLWGVPLV PLLMVAGGML IPAIWVLMAS APLGVAIVLL IVPVFATMRM ITRQDDQRLA QRMLRVKMRL CQRNRRFWGA HAYAPIRLKA RG // ID Q1GN14_RUEST Unreviewed; 81 AA. AC Q1GN14; DT 27-JUN-2006, integrated into UniProtKB/TrEMBL. DT 27-JUN-2006, sequence version 1. DT 14-MAY-2014, entry version 38. DE SubName: Full=Type IV secretory pathway VirB3-like protein; GN Name=virB3; OrderedLocusNames=TM1040_3820; OS Ruegeria sp. (strain TM1040) (Silicibacter sp.). OG Plasmid pTM1040. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Ruegeria. OX NCBI_TaxID=292414; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=TM1040; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Goodwin L., RA Thompson L.S., Gilna P., Schmutz J., Larimer F., Land M., Hauser L., RA Kyrpides N., Kim E., Belas R., Moran M.A., Buchan A., Gonzalez J.M., RA Schell M.A., Sun F., Richardson P.; RT "Complete sequence of plasmid of Silicibacter sp. TM1040."; RL Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000375; ABF61952.1; -; Genomic_DNA. DR RefSeq; YP_611214.1; NC_008042.1. DR STRING; 292414.TM1040_3820; -. DR EnsemblBacteria; ABF61952; ABF61952; TM1040_3820. DR GeneID; 4074971; -. DR KEGG; sit:TM1040_3820; -. DR PATRIC; 23382371; VBIRueSp69653_0056. DR eggNOG; COG3702; -. DR HOGENOM; HOG000251901; -. DR KO; K03198; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; RSP292414:GHCT-3901-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 81 AA; 9257 MW; A9874FEE82E20765 CRC64; MRPPKLLGLP IMYAMVWLFG SVLLFVWIQH IVVLGVTAFL YPVLWKAADW DPRFIDVMMT ALQETPPTRN RSIHGGDSYA P // ID Q1GPV4_SPHAL Unreviewed; 89 AA. AC Q1GPV4; DT 27-JUN-2006, integrated into UniProtKB/TrEMBL. DT 27-JUN-2006, sequence version 1. DT 14-MAY-2014, entry version 38. DE SubName: Full=Putative conjugal transfer protein; GN OrderedLocusNames=Sala_2612; OS Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) OS (Sphingomonas alaskensis). OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Sphingopyxis. OX NCBI_TaxID=317655; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 13593 / LMG 18877 / RB2256; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Munk A.C., RA Chertkov O., Gilna P., Schmutz J., Larimer F., Land M., Hauser L., RA Kyrpides N., Kim E., Cavicchioli R., Robb F., Ertan H., Schut F., RA Ting L.M., Richardson P.; RT "Complete sequence of chromosome of Sphingopyxis alaskensis RB2256."; RL Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000356; ABF54318.1; -; Genomic_DNA. DR RefSeq; YP_617651.1; NC_008048.1. DR STRING; 317655.Sala_2612; -. DR EnsemblBacteria; ABF54318; ABF54318; Sala_2612. DR GeneID; 4081665; -. DR KEGG; sal:Sala_2612; -. DR PATRIC; 23694576; VBISphAla23391_2703. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; WAIGHIA; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; SALA317655:GHHY-2646-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 89 AA; 9682 MW; 6E4B4A8D8232A98B CRC64; MNSADDIPGY YAPVHRALCE PILLGGAPRS LAIVNGTLAG AIGLGLRLWI AGLALWAIGH ALSVWAARRD PQFVDVARRH LKYPVWMRP // ID Q1H9V1_9BACT Unreviewed; 103 AA. AC Q1H9V1; J9Z798; DT 27-JUN-2006, integrated into UniProtKB/TrEMBL. DT 27-JUN-2006, sequence version 1. DT 14-MAY-2014, entry version 20. DE SubName: Full=TrbD mating pair formation protein; GN Name=trbD; OS uncultured bacterium. OG Plasmid QKH54, and Plasmid pMBUI1. OC Bacteria; environmental samples. OX NCBI_TaxID=77133; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=QKH54; RA Akhtar P.; RT "Phylogeny and genomic motifs of the beta sub-family of IncP-1 RT plasmids."; RL Thesis (2002), Department of Biosciences, University of Birmingham, RL Birmingham, United Kingdom. RN [2] RP NUCLEOTIDE SEQUENCE. RC PLASMID=QKH54; RA Haines A.S., Akhtar P., Stephens E.R., Jones K., Thomas C.M., RA Perkins C.D., Williams J.R., Day M.J., Fry J.C.; RT "Plasmids from freshwater environments capable of IncQ retrotransfer RT are diverse and include pQKH54, a new IncP-1 subgroup archetype."; RL Microbiology (Mosc.) 152:2689-2701(2006). RN [3] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pMBUI1; RX PubMed=24002747; RA Yano H., Rogers L.M., Knox M.G., Heuer H., Smalla K., Brown C.J., RA Top E.M.; RT "Host range diversification within the IncP-1 plasmid group."; RL Microbiology 159:2303-2315(2013). RN [4] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pMBUI1; RX PubMed=22936717; DOI=10.1093/molbev/mss210; RA Sen D., Brown C.J., Top E.M., Sullivan J.; RT "Inferring the evolutionary history of IncP-1 plasmids despite RT incongruence among backbone gene trees."; RL Mol. Biol. Evol. 30:154-166(2013). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JQ432563; AFS51465.1; -; Genomic_DNA. DR EMBL; AM157767; CAJ43312.1; -; Genomic_DNA. DR RefSeq; YP_619830.1; NC_008055.1. DR GeneID; 4099498; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11970 MW; 3573298B005186E3 CRC64; MALRTIPIRR AGNRDNLFMG GDRELVMFSG LLAFALVFSA QELRATVVGI VLWFGALFVL RIMAKSDPKM RFVYLRHRRY KHFYPARSTP FRDNPTSQGN QYK // ID Q1LN41_RALME Unreviewed; 90 AA. AC Q1LN41; DT 30-MAY-2006, integrated into UniProtKB/TrEMBL. DT 30-MAY-2006, sequence version 1. DT 14-MAY-2014, entry version 46. DE SubName: Full=Putative conjugal transfer transmembrane protein; GN Name=trbD; OrderedLocusNames=Rmet_1552; OS Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Cupriavidus. OX NCBI_TaxID=266264; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CH34 / ATCC 43123 / DSM 2839; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Martinez M., Goltsman E., Pitluck S., Schmutz J., Larimer F., Land M., RA Hauser L., Kyrpides N., Kim E., Mergeay M., Benotmane M.A., RA Vallaeys T., Michaux A., Monchy S., Dunn J., McCorkle S., Taghavi S., RA van der Lelie D., Richardson P.; RT "Complete sequence of the chromosome of Ralstonia metallidurans RT CH34."; RL Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000352; ABF08435.1; -; Genomic_DNA. DR RefSeq; YP_583704.1; NC_007973.1. DR STRING; 266264.Rmet_1552; -. DR EnsemblBacteria; ABF08435; ABF08435; Rmet_1552. DR GeneID; 4038355; -. DR PATRIC; 20287720; VBIRalMet4734_1962. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR OMA; PGLVLWI; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; CMET266264:GJ5G-1619-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 90 AA; 9688 MW; FE9073E4DC6BC309 CRC64; MSAPDTFADG FEVPLHRSLT EPILLGGAPR TVAIANGTLT AAVGLGLQLW IPGVVLWIVG HSLAVWGARV DPQFMQVFAR HIKHRPLLDV // ID Q1LNQ0_RALME Unreviewed; 90 AA. AC Q1LNQ0; DT 30-MAY-2006, integrated into UniProtKB/TrEMBL. DT 30-MAY-2006, sequence version 1. DT 14-MAY-2014, entry version 43. DE SubName: Full=Conjugal transfer TrbD transmembrane protein (Protein belongs to CMGI-2); GN Name=trbD; OrderedLocusNames=Rmet_1343; OS Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Cupriavidus. OX NCBI_TaxID=266264; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CH34 / ATCC 43123 / DSM 2839; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Martinez M., Goltsman E., Pitluck S., Schmutz J., Larimer F., Land M., RA Hauser L., Kyrpides N., Kim E., Mergeay M., Benotmane M.A., RA Vallaeys T., Michaux A., Monchy S., Dunn J., McCorkle S., Taghavi S., RA van der Lelie D., Richardson P.; RT "Complete sequence of the chromosome of Ralstonia metallidurans RT CH34."; RL Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000352; ABF08226.1; -; Genomic_DNA. DR STRING; 266264.Rmet_1343; -. DR EnsemblBacteria; ABF08226; ABF08226; Rmet_1343. DR KEGG; rme:Rmet_1343; -. DR PATRIC; 20287294; VBIRalMet4734_1749. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; AVWATKR; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; CMET266264:GJ5G-1404-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 90 AA; 9543 MW; 5890B9346CA761ED CRC64; MSGPDTFAAG FEVPLHRSLT EPILLGGAPR TVAIANGTLA AAVGLGLQLW IPGVVLWIVG HSLAVWGARV DPQFMAVFAR HIKHRPLLDV // ID Q1M981_RHIL3 Unreviewed; 99 AA. AC Q1M981; DT 30-MAY-2006, integrated into UniProtKB/TrEMBL. DT 30-MAY-2006, sequence version 1. DT 14-MAY-2014, entry version 38. DE SubName: Full=Putative conjugal transfer protein TrbD; GN Name=trbDp8; OrderedLocusNames=pRL80140; OS Rhizobium leguminosarum bv. viciae (strain 3841). OG Plasmid pRL8. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium. OX NCBI_TaxID=216596; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=3841; PLASMID=pRL8; RX PubMed=16640791; DOI=10.1186/gb-2006-7-4-r34; RA Young J.P.W., Crossman L.C., Johnston A.W.B., Thomson N.R., RA Ghazoui Z.F., Hull K.H., Wexler M., Curson A.R.J., Todd J.D., RA Poole P.S., Mauchline T.H., East A.K., Quail M.A., Churcher C., RA Arrowsmith C., Cherevach I., Chillingworth T., Clarke K., Cronin A., RA Davis P., Fraser A., Hance Z., Hauser H., Jagels K., Moule S., RA Mungall K., Norbertczak H., Rabbinowitsch E., Sanders M., Simmonds M., RA Whitehead S., Parkhill J.; RT "The genome of Rhizobium leguminosarum has recognizable core and RT accessory components."; RL Genome Biol. 7:R34.1-R34.20(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM236082; CAK02940.1; -; Genomic_DNA. DR RefSeq; YP_771031.1; NC_008383.1. DR STRING; 216596.pRL80140; -. DR EnsemblBacteria; CAK02940; CAK02940; pRL80140. DR GeneID; 4404582; -. DR KEGG; rle:pRL80140; -. DR PATRIC; 23147924; VBIRhiLeg32091_6859. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; LRMMAKS; -. DR OrthoDB; EOG6N6849; -. DR BioCyc; RLEG216596:GKE5-7372-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 99 AA; 11261 MW; 9BE3D25C1F9FF74C CRC64; MADAGVGLHR NRIHRALSRP NLLMGADREL VLLTGLAAII LIFVVLTIYS ALFGIAIWIV VVGALRMMAK ADPMMRKVYA RHMRYRAHYL PTSAPWRRY // ID Q1M9N9_RHIL3 Unreviewed; 92 AA. AC Q1M9N9; DT 30-MAY-2006, integrated into UniProtKB/TrEMBL. DT 30-MAY-2006, sequence version 1. DT 14-MAY-2014, entry version 32. DE SubName: Full=Putative transmembrane protein homolog; GN OrderedLocusNames=pRL70151; OS Rhizobium leguminosarum bv. viciae (strain 3841). OG Plasmid pRL7. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium. OX NCBI_TaxID=216596; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=3841; PLASMID=pRL7; RX PubMed=16640791; DOI=10.1186/gb-2006-7-4-r34; RA Young J.P.W., Crossman L.C., Johnston A.W.B., Thomson N.R., RA Ghazoui Z.F., Hull K.H., Wexler M., Curson A.R.J., Todd J.D., RA Poole P.S., Mauchline T.H., East A.K., Quail M.A., Churcher C., RA Arrowsmith C., Cherevach I., Chillingworth T., Clarke K., Cronin A., RA Davis P., Fraser A., Hance Z., Hauser H., Jagels K., Moule S., RA Mungall K., Norbertczak H., Rabbinowitsch E., Sanders M., Simmonds M., RA Whitehead S., Parkhill J.; RT "The genome of Rhizobium leguminosarum has recognizable core and RT accessory components."; RL Genome Biol. 7:R34.1-R34.20(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AM236081; CAK11678.1; -; Genomic_DNA. DR RefSeq; YP_770873.1; NC_008382.1. DR STRING; 216596.pRL70151; -. DR EnsemblBacteria; CAK11678; CAK11678; pRL70151. DR GeneID; 4404445; -. DR KEGG; rle:pRL70151; -. DR eggNOG; NOG148097; -. DR HOGENOM; HOG000118136; -. DR KO; K03198; -. DR OrthoDB; EOG6ND0NX; -. DR BioCyc; RLEG216596:GKE5-7196-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Membrane; Plasmid; Transmembrane. SQ SEQUENCE 92 AA; 10253 MW; C147E28197A80AAF CRC64; MERTPLFVGL TREVSFAGLP IMYLVVLIAT VMLGFIITRS FVYLLITGGV GYVALRGLAA YDPKIISVFI ATVQRTRMSP RLLRGEELVY RA // ID Q1NBZ6_9SPHN Unreviewed; 116 AA. AC Q1NBZ6; DT 30-MAY-2006, integrated into UniProtKB/TrEMBL. DT 30-MAY-2006, sequence version 1. DT 19-FEB-2014, entry version 9. DE SubName: Full=Uncharacterized protein; GN ORFNames=SKA58_18490; OS Sphingomonas sp. SKA58. OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Sphingomonas. OX NCBI_TaxID=314266; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=SKA58; RA Hagstrom A., Ferriera S., Johnson J., Kravitz S., Halpern A., RA Remington K., Beeson K., Tran B., Rogers Y.-H., Friedman R., RA Venter J.C.; RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAQG01000009; EAT08457.1; -; Genomic_DNA. DR EnsemblBacteria; EAT08457; EAT08457; SKA58_18490. DR PATRIC; 29452487; VBISphSp87348_3553. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 116 AA; 12664 MW; 42CEE7474F94B676 CRC64; MKESAALDER LREETLFLAV TRPTMWLGVP LEASLPIALA ACLTLIVSGN PLYAGAIGGA CLAVARLIVR HDANAFRLLW LWTMTKARSR NRVWWGGSSY SPLPVAGLKR KGFARG // ID Q1NCP3_9SPHN Unreviewed; 90 AA. AC Q1NCP3; DT 30-MAY-2006, integrated into UniProtKB/TrEMBL. DT 30-MAY-2006, sequence version 1. DT 19-FEB-2014, entry version 10. DE SubName: Full=Probable conjugal transfer trbd transmembrane protein; GN ORFNames=SKA58_16753; OS Sphingomonas sp. SKA58. OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Sphingomonas. OX NCBI_TaxID=314266; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=SKA58; RA Hagstrom A., Ferriera S., Johnson J., Kravitz S., Halpern A., RA Remington K., Beeson K., Tran B., Rogers Y.-H., Friedman R., RA Venter J.C.; RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAQG01000007; EAT08847.1; -; Genomic_DNA. DR EnsemblBacteria; EAT08847; EAT08847; SKA58_16753. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Membrane; Transmembrane. SQ SEQUENCE 90 AA; 9292 MW; D5BD3A7A81FDB750 CRC64; MTGSGQHLEG FEVPIHGALG SPILLGGAPR MLAIVNGTLA AAVGLGLQQW LAGVLLWAAG HSLAVLAARR DPSFAPVLLR HLRQKGHLSC // ID Q1ND05_9SPHN Unreviewed; 93 AA. AC Q1ND05; DT 30-MAY-2006, integrated into UniProtKB/TrEMBL. DT 30-MAY-2006, sequence version 1. DT 03-APR-2013, entry version 9. DE SubName: Full=Conjugal transfer protein trbD; GN ORFNames=SKA58_16193; OS Sphingomonas sp. SKA58. OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Sphingomonas. OX NCBI_TaxID=314266; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=SKA58; RA Hagstrom A., Ferriera S., Johnson J., Kravitz S., Halpern A., RA Remington K., Beeson K., Tran B., Rogers Y.-H., Friedman R., RA Venter J.C.; RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAQG01000007; EAT08735.1; -; Genomic_DNA. DR EnsemblBacteria; EAT08735; EAT08735; SKA58_16193. DR PATRIC; 29450485; VBISphSp87348_1869. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 93 AA; 9988 MW; DCF742BEE38BD40E CRC64; MTGAADPVEP IAGFYAPVHR ALTEPILLGG APRSLAIVNG TLAGAIGLGL RLWVAGLVIW AIGHALSVWA ARRDPQFVDV ARRHLRYPAW MRP // ID Q1QF55_NITHX Unreviewed; 99 AA. AC Q1QF55; DT 16-MAY-2006, integrated into UniProtKB/TrEMBL. DT 16-MAY-2006, sequence version 1. DT 14-MAY-2014, entry version 39. DE SubName: Full=Conjugal transfer TrbD; GN OrderedLocusNames=Nham_4567; OS Nitrobacter hamburgensis (strain X14 / DSM 10229). OG Plasmid pNITHX3. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Nitrobacter. OX NCBI_TaxID=323097; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=X14 / DSM 10229; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., RA Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Ward B., RA Arp D., Klotz M., Stein L., O'Mullan G., Starkenburg S., Sayavedra L., RA Poret-Peterson A.T., Gentry M.E., Bruce D., Richardson P.; RT "Complete sequence of plasmid 3 of Nitrobacter hamburgensis X14."; RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000322; ABE65142.1; -; Genomic_DNA. DR RefSeq; YP_571974.1; NC_007961.1. DR STRING; 323097.Nham_4567; -. DR EnsemblBacteria; ABE65142; ABE65142; Nham_4567. DR GeneID; 4025335; -. DR KEGG; nha:Nham_4567; -. DR PATRIC; 22687068; VBINitHam61822_0579. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; LRMMAKS; -. DR OrthoDB; EOG6N6849; -. DR BioCyc; NHAM323097:GHP7-4633-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 99 AA; 11326 MW; 90A7587BAB6C5B12 CRC64; MAEAGAELRR NRIHRALSRP NLLFGADREL VLLTGLAAVI LIFVVLTWYA AILGAAIWIV VVAALRMMAK ADPMMRRVYA RHISYRPNYR ATSTPWRRY // ID Q1QFG7_NITHX Unreviewed; 98 AA. AC Q1QFG7; DT 16-MAY-2006, integrated into UniProtKB/TrEMBL. DT 16-MAY-2006, sequence version 1. DT 14-MAY-2014, entry version 38. DE SubName: Full=Type IV secretory pathway, VirB3-like; GN OrderedLocusNames=Nham_4446; OS Nitrobacter hamburgensis (strain X14 / DSM 10229). OG Plasmid pNITHX2. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Nitrobacter. OX NCBI_TaxID=323097; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=X14 / DSM 10229; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., RA Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Ward B., RA Arp D., Klotz M., Stein L., O'Mullan G., Starkenburg S., Sayavedra L., RA Poret-Peterson A.T., Gentry M.E., Bruce D., Richardson P.; RT "Complete sequence of plasmid 2 of Nitrobacter hamburgensis X14."; RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000321; ABE65030.1; -; Genomic_DNA. DR RefSeq; YP_571862.1; NC_007960.1. DR STRING; 323097.Nham_4446; -. DR EnsemblBacteria; ABE65030; ABE65030; Nham_4446. DR GeneID; 4025457; -. DR KEGG; nha:Nham_4446; -. DR PATRIC; 22686815; VBINitHam61822_0453. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; VPYMAVV; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; NHAM323097:GHP7-4512-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 98 AA; 11096 MW; E04CDF9D3209E734 CRC64; MTGDELEDPL ISPLVKALTR APTLMGVPYM YFMFNGVVSS VCFLVTHNLF MLLVAIPLHL FGYVMTLRDD RIFEILFVKS TKCPPRSRAF WAADSYSA // ID Q1RH08_RICBR Unreviewed; 95 AA. AC Q1RH08; DT 16-MAY-2006, integrated into UniProtKB/TrEMBL. DT 16-MAY-2006, sequence version 1. DT 14-MAY-2014, entry version 33. DE SubName: Full=VirB3; GN Name=virB3; OrderedLocusNames=RBE_1275; OS Rickettsia bellii (strain RML369-C). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; belli group. OX NCBI_TaxID=336407; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=RML369-C; RX PubMed=16703114; DOI=10.1371/journal.pgen.0020076; RA Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C., RA Fournier P.E., Claverie J.M., Raoult D.; RT "Genome sequence of Rickettsia bellii illuminates the role of amoebae RT in gene exchanges between intracellular pathogens."; RL PLoS Genet. 2:733-744(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000087; ABE05356.1; -; Genomic_DNA. DR RefSeq; YP_538445.1; NC_007940.1. DR STRING; 336407.RBE_1275; -. DR EnsemblBacteria; ABE05356; ABE05356; RBE_1275. DR GeneID; 3996172; -. DR KEGG; rbe:RBE_1275; -. DR PATRIC; 17884180; VBIRicBel102610_1439. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; RBEL336407:GJCY-1312-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10755 MW; 0B10A0E490D7435A CRC64; MAGTLATDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAGLHLIAYI ICFKEPRFIE LYMNKMSRTS QCPNKFYYGA NSYGI // ID Q1XGH4_PSEPU Unreviewed; 97 AA. AC Q1XGH4; DT 02-MAY-2006, integrated into UniProtKB/TrEMBL. DT 02-MAY-2006, sequence version 1. DT 14-MAY-2014, entry version 17. DE SubName: Full=Putative mating pair formation protein MpfB; GN Name=mpfB; OS Pseudomonas putida (Arthrobacter siderocapsulatus). OG Plasmid NAH7. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. OX NCBI_TaxID=303; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=G7; PLASMID=NAH7; RX PubMed=2175388; DOI=10.1007/BF00315794; RA Tsuda M., Iino T.; RT "Naphthalene degrading genes on plasmid NAH7 are on a defective RT transposon."; RL Mol. Gen. Genet. 223:33-39(1990). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=G7; PLASMID=NAH7; RX PubMed=16707697; DOI=10.1128/JB.00185-06; RA Sota M., Yano H., Ono A., Miyazaki R., Ishii H., Genka H., Top E.M., RA Tsuda M.; RT "Genomic and functional analysis of the IncP-9 naphthalene-catabolic RT plasmid NAH7 and its transposon Tn4655 suggests catabolic gene spread RT by a tyrosine recombinase."; RL J. Bacteriol. 188:4057-4067(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AB237655; BAE92202.1; -; Genomic_DNA. DR RefSeq; YP_534868.1; NC_007926.1. DR GeneID; 3974198; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 97 AA; 10725 MW; A127D949339B63FF CRC64; MAEQDPDEGE VLVVAMARPS MVGPFTLSSI LISLITPVLA ALLLRSLYVL ASMPILFAAA YWICSKDVYL FGVIKAAFKL TASRLRKLWG YRSYAPR // ID Q209M2_AERHY Unreviewed; 106 AA. AC Q209M2; DT 18-APR-2006, integrated into UniProtKB/TrEMBL. DT 18-APR-2006, sequence version 1. DT 14-MAY-2014, entry version 12. DE SubName: Full=VirB3 protein; GN Name=virB3; ORFNames=pRA3.28; OS Aeromonas hydrophila. OG Plasmid pRA3. OC Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; OC Aeromonadaceae; Aeromonas. OX NCBI_TaxID=644; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pRA3; RX PubMed=18502921; DOI=10.1128/AEM.00229-08; RA Kulinska A., Czeredys M., Hayes F., Jagura-Burdzy G.; RT "Genomic and functional characterization of the modular broad-host- RT range RA3 plasmid, the archetype of the IncU group."; RL Appl. Environ. Microbiol. 74:4119-4132(2008). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; DQ401103; ABD64856.1; -; Genomic_DNA. DR RefSeq; YP_001966845.1; NC_010919.1. DR GeneID; 6385810; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 106 AA; 11906 MW; B5C40D7CC5F3A4D1 CRC64; MATATDPLFV GATRPSLVMG VTYEAIIICV SIVGMLFLAT NNPFLLLFYI PMHGACYLIC LKDPRFFRFL LLWLGTKAKS ISWRYWGAAT ASPRVSTRKQ SRRMPG // ID Q20ZL1_RHOPB Unreviewed; 93 AA. AC Q20ZL1; DT 18-APR-2006, integrated into UniProtKB/TrEMBL. DT 18-APR-2006, sequence version 1. DT 14-MAY-2014, entry version 35. DE SubName: Full=Type IV secretory pathway, VirB3-like; GN OrderedLocusNames=RPC_3899; OS Rhodopseudomonas palustris (strain BisB18). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Rhodopseudomonas. OX NCBI_TaxID=316056; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BisB18; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., RA Larimer F., Land M., Hauser L., Pelletier D.A., Kyrpides N., RA Anderson I., Oda Y., Harwood C.S., Richardson P.; RT "Complete sequence of Rhodopseudomonas palustris BisB18."; RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000301; ABD89425.1; -; Genomic_DNA. DR RefSeq; YP_533744.1; NC_007925.1. DR STRING; 316056.RPC_3899; -. DR EnsemblBacteria; ABD89425; ABD89425; RPC_3899. DR GeneID; 3969262; -. DR KEGG; rpc:RPC_3899; -. DR PATRIC; 23272622; VBIRhoPal29154_3987. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; AVWATKR; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; RPAL316056:GH3E-3954-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 9803 MW; FC521008EAA9E1B9 CRC64; MDASATAEQP IPGFTVPVHR ALTEPILLGG APRAVAILNG TLAAALGLGL RLWLAGLVLW VIGHGAAVWA TKRDPQFVDV VRRHLRISGH LSV // ID Q210V8_RHOPB Unreviewed; 87 AA. AC Q210V8; DT 18-APR-2006, integrated into UniProtKB/TrEMBL. DT 18-APR-2006, sequence version 1. DT 14-MAY-2014, entry version 36. DE SubName: Full=Conjugal transfer protein TrbD; GN OrderedLocusNames=RPC_3539; OS Rhodopseudomonas palustris (strain BisB18). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Rhodopseudomonas. OX NCBI_TaxID=316056; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=BisB18; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., RA Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., RA Larimer F., Land M., Hauser L., Pelletier D.A., Kyrpides N., RA Anderson I., Oda Y., Harwood C.S., Richardson P.; RT "Complete sequence of Rhodopseudomonas palustris BisB18."; RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000301; ABD89078.1; -; Genomic_DNA. DR RefSeq; YP_533397.1; NC_007925.1. DR STRING; 316056.RPC_3539; -. DR EnsemblBacteria; ABD89078; ABD89078; RPC_3539. DR GeneID; 3973946; -. DR KEGG; rpc:RPC_3539; -. DR PATRIC; 23271906; VBIRhoPal29154_3634. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; WAIGHIA; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; RPAL316056:GH3E-3588-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 87 AA; 9214 MW; B511FAB5D4922AA4 CRC64; MEETIPGFAA PVHRALTEHI LLGGAPRAVA ILNGTLAAAL GLGLRLWLAG LLLAFLGHAA AVWAAKRDPQ FVDVVRRHLR IPGHLSV // ID Q21QJ7_RHOFD Unreviewed; 101 AA. AC Q21QJ7; DT 18-APR-2006, integrated into UniProtKB/TrEMBL. DT 18-APR-2006, sequence version 1. DT 14-MAY-2014, entry version 32. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=Rfer_4261; OS Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118). OG Plasmid pDSM15236. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Albidiferax. OX NCBI_TaxID=338969; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 15236 / ATCC BAA-621 / T118; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., RA Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., RA Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., RA Land M., Kyrpides N., Ivanova N., Richardson P.; RT "Complete sequence of plasmid 1 of Rhodoferax ferrireducens DSM RT 15236."; RL Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000268; ABD71948.1; -; Genomic_DNA. DR RefSeq; YP_515946.1; NC_007901.1. DR STRING; 338969.Rfer_4261; -. DR EnsemblBacteria; ABD71948; ABD71948; Rfer_4261. DR GeneID; 3959836; -. DR KEGG; rfr:Rfer_4261; -. DR eggNOG; NOG271836; -. DR KO; K03198; -. DR OMA; KRDENIY; -. DR OrthoDB; EOG63NMRB; -. DR BioCyc; AFER338969:GHU9-4319-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 101 AA; 11632 MW; 1CD536F5245BC0D3 CRC64; MRATPIYQCL LEVKSVAGAE FQPVVINVTM GLVMVIGPGL TWWLAVTYFG HKLLQWMFGR DPHLSRIFTK YMKEGDFYDP WPKPSQHMNK RPFGAGRDLL C // ID Q2GBK9_NOVAD Unreviewed; 91 AA. AC Q2GBK9; DT 21-MAR-2006, integrated into UniProtKB/TrEMBL. DT 21-MAR-2006, sequence version 1. DT 14-MAY-2014, entry version 39. DE SubName: Full=Conjugal transfer protein TrbD; GN OrderedLocusNames=Saro_0316; OS Novosphingobium aromaticivorans (strain DSM 12444 / F199). OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Novosphingobium. OX NCBI_TaxID=279238; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 12444; RG US DOE Joint Genome Institute; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., RA Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., RA Vergez L., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., RA Fredrickson J., Balkwill D., Romine M.F., Richardson P.; RT "Complete sequence of Novosphingobium aromaticivorans DSM 12444."; RL Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000248; ABD24764.1; -; Genomic_DNA. DR RefSeq; YP_495598.1; NC_007794.1. DR STRING; 279238.Saro_0316; -. DR EnsemblBacteria; ABD24764; ABD24764; Saro_0316. DR GeneID; 3915558; -. DR KEGG; nar:Saro_0316; -. DR PATRIC; 22783226; VBINovAro50627_0326. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; WAIGHIA; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; NARO279238:GHBU-321-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 91 AA; 9759 MW; 08EF4DBCB64F01B2 CRC64; MEGAPSGLPL GYAVPVHRAL TEHILLGGAP RGLAIANATL AGAIGLGLRL WIAGLVLFTL GHMVAVWAAR RDPQFVDVAR RHLRFPNYLR V // ID Q2GCR5_NEOSM Unreviewed; 98 AA. AC Q2GCR5; DT 21-MAR-2006, integrated into UniProtKB/TrEMBL. DT 21-MAR-2006, sequence version 1. DT 14-MAY-2014, entry version 36. DE SubName: Full=Type IV secretion system protein VirB3; GN Name=virB3; OrderedLocusNames=NSE_0864; OS Neorickettsia sennetsu (strain Miyayama). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Neorickettsia. OX NCBI_TaxID=222891; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Miyayama; RX PubMed=16482227; DOI=10.1371/journal.pgen.0020021; RA Hotopp J.C., Lin M., Madupu R., Crabtree J., Angiuoli S.V., RA Eisen J.A., Seshadri R., Ren Q., Wu M., Utterback T.R., Smith S., RA Lewis M., Khouri H., Zhang C., Niu H., Lin Q., Ohashi N., Zhi N., RA Nelson W., Brinkac L.M., Dodson R.J., Rosovitz M.J., Sundaram J., RA Daugherty S.C., Davidsen T., Durkin A.S., Gwinn M., Haft D.H., RA Selengut J.D., Sullivan S.A., Zafar N., Zhou L., Benahmed F., RA Forberger H., Halpin R., Mulligan S., Robinson J., White O., RA Rikihisa Y., Tettelin H.; RT "Comparative genomics of emerging human ehrlichiosis agents."; RL PLoS Genet. 2:208-222(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000237; ABD45884.1; -; Genomic_DNA. DR RefSeq; YP_506731.1; NC_007798.1. DR STRING; 222891.NSE_0864; -. DR EnsemblBacteria; ABD45884; ABD45884; NSE_0864. DR GeneID; 3931469; -. DR KEGG; nse:NSE_0864; -. DR PATRIC; 22681723; VBINeoSen119815_0773. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; RAYHDAN; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; NSEN222891:GHFU-867-MONOMER; -. DR GO; GO:0030255; P:protein secretion by the type IV secretion system; ISS:TIGR. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 98 AA; 11178 MW; 8C92F0F19BE1A285 CRC64; MGVGSLGLDP LFKGLTRPAM FLGVSFTFSA MNLIISLLAY ILTKNLFILL FFMPTIHGIG YLICFNEPLF LELFLVRNQK CMRCKNRAYH DANSYDVF // ID Q2GGX4_EHRCR Unreviewed; 97 AA. AC Q2GGX4; DT 21-MAR-2006, integrated into UniProtKB/TrEMBL. DT 21-MAR-2006, sequence version 1. DT 14-MAY-2014, entry version 37. DE SubName: Full=Type IV secretion system protein VirB3; GN Name=virB3; OrderedLocusNames=ECH_0494; OS Ehrlichia chaffeensis (strain ATCC CRL-10679 / Arkansas). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Ehrlichia. OX NCBI_TaxID=205920; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC CRL-10679 / Arkansas; RX PubMed=16482227; DOI=10.1371/journal.pgen.0020021; RA Hotopp J.C., Lin M., Madupu R., Crabtree J., Angiuoli S.V., RA Eisen J.A., Seshadri R., Ren Q., Wu M., Utterback T.R., Smith S., RA Lewis M., Khouri H., Zhang C., Niu H., Lin Q., Ohashi N., Zhi N., RA Nelson W., Brinkac L.M., Dodson R.J., Rosovitz M.J., Sundaram J., RA Daugherty S.C., Davidsen T., Durkin A.S., Gwinn M., Haft D.H., RA Selengut J.D., Sullivan S.A., Zafar N., Zhou L., Benahmed F., RA Forberger H., Halpin R., Mulligan S., Robinson J., White O., RA Rikihisa Y., Tettelin H.; RT "Comparative genomics of emerging human ehrlichiosis agents."; RL PLoS Genet. 2:208-222(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000236; ABD44690.1; -; Genomic_DNA. DR RefSeq; YP_507309.1; NC_007799.1. DR STRING; 205920.ECH_0494; -. DR EnsemblBacteria; ABD44690; ABD44690; ECH_0494. DR GeneID; 3927079; -. DR KEGG; ech:ECH_0494; -. DR PATRIC; 20576460; VBIEhrCha103583_0426. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; ECHA205920:GJNR-496-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 97 AA; 11170 MW; 8FB3C3C90AAE9B2A CRC64; MAGTVKADQL FKGLTRPTML FGVSYIFAML NFMICIMIFM YTNDFRALFI LGPGIHSVGF LASSKEPLFL ELFMLRMKKC SKCLNRFYHN ANSYDVM // ID Q2GKX3_ANAPZ Unreviewed; 97 AA. AC Q2GKX3; DT 21-MAR-2006, integrated into UniProtKB/TrEMBL. DT 21-MAR-2006, sequence version 1. DT 14-MAY-2014, entry version 40. DE SubName: Full=Type IV secretion system protein VirB3; GN Name=virB3; OrderedLocusNames=APH_0372; OS Anaplasma phagocytophilum (strain HZ). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Anaplasma; phagocytophilum group. OX NCBI_TaxID=212042; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=HZ; RX PubMed=16482227; DOI=10.1371/journal.pgen.0020021; RA Hotopp J.C., Lin M., Madupu R., Crabtree J., Angiuoli S.V., RA Eisen J.A., Seshadri R., Ren Q., Wu M., Utterback T.R., Smith S., RA Lewis M., Khouri H., Zhang C., Niu H., Lin Q., Ohashi N., Zhi N., RA Nelson W., Brinkac L.M., Dodson R.J., Rosovitz M.J., Sundaram J., RA Daugherty S.C., Davidsen T., Durkin A.S., Gwinn M., Haft D.H., RA Selengut J.D., Sullivan S.A., Zafar N., Zhou L., Benahmed F., RA Forberger H., Halpin R., Mulligan S., Robinson J., White O., RA Rikihisa Y., Tettelin H.; RT "Comparative genomics of emerging human ehrlichiosis agents."; RL PLoS Genet. 2:208-222(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000235; ABD44415.1; -; Genomic_DNA. DR RefSeq; YP_504978.1; NC_007797.1. DR STRING; 212042.APH_0372; -. DR EnsemblBacteria; ABD44415; ABD44415; APH_0372. DR GeneID; 3930714; -. DR KEGG; aph:APH_0372; -. DR PATRIC; 20949350; VBIAnaPha602_0395. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; APHA212042:GHPM-371-MONOMER; -. DR GO; GO:0030255; P:protein secretion by the type IV secretion system; TAS:TIGR. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 97 AA; 11112 MW; 46BC46A393C684A2 CRC64; MSGSVKADQL FKGLTRPTML FGVSYTFAIM NFMLSIMIFM YSNDFRVLFI LAPGMHGLGF IASAKDPLFM DLLIIRMQKC SKCLNRFYHN SNSYDVM // ID Q2K2D5_RHIEC Unreviewed; 108 AA. AC Q2K2D5; DT 07-MAR-2006, integrated into UniProtKB/TrEMBL. DT 07-MAR-2006, sequence version 1. DT 14-MAY-2014, entry version 32. DE SubName: Full=Transport secretion system IV, VirB3 protein; GN Name=virB3a; OrderedLocusNames=RHE_PA00044; OS Rhizobium etli (strain CFN 42 / ATCC 51251). OG Plasmid p42a. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium. OX NCBI_TaxID=347834; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CFN 42 / ATCC 51251; PLASMID=p42a; RX PubMed=16505379; DOI=10.1073/pnas.0508502103; RA Gonzalez V., Santamaria R.I., Bustos P., Hernandez-Gonzalez I., RA Medrano-Soto A., Moreno-Hagelsieb G., Janga S.C., Ramirez M.A., RA Jimenez-Jacinto V., Collado-Vides J., Davila G.; RT "The partitioned Rhizobium etli genome: genetic and metabolic RT redundancy in seven interacting replicons."; RL Proc. Natl. Acad. Sci. U.S.A. 103:3834-3839(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000134; ABC92913.1; -; Genomic_DNA. DR RefSeq; YP_471640.1; NC_007762.1. DR STRING; 347834.RHE_PA00044; -. DR EnsemblBacteria; ABC92913; ABC92913; RHE_PA00044. DR GeneID; 3894781; -. DR KEGG; ret:RHE_PA00044; -. DR PATRIC; 23090091; VBIRhiEtl108884_4677. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; RDYNAAS; -. DR OrthoDB; EOG6HJ293; -. DR BioCyc; RETL347834:GJJ0-5861-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 108 AA; 11699 MW; 1CD97478EE504265 CRC64; MNERLEEATL YLAATRPALF LGVPLTLAGI FMMLGGFVIV VVQNPLYEVV IIPLWFSARL VVERDYNAAS VVLLFLQTAG RNVDGLVWGG ASVSPNPIRV PARGRGMA // ID Q2K2R2_RHIEC Unreviewed; 99 AA. AC Q2K2R2; DT 07-MAR-2006, integrated into UniProtKB/TrEMBL. DT 07-MAR-2006, sequence version 1. DT 14-MAY-2014, entry version 34. DE SubName: Full=Conjugal transfer protein D; GN Name=trbD; OrderedLocusNames=RHE_PA00176; OS Rhizobium etli (strain CFN 42 / ATCC 51251). OG Plasmid p42a. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium. OX NCBI_TaxID=347834; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CFN 42 / ATCC 51251; PLASMID=p42a; RX PubMed=16505379; DOI=10.1073/pnas.0508502103; RA Gonzalez V., Santamaria R.I., Bustos P., Hernandez-Gonzalez I., RA Medrano-Soto A., Moreno-Hagelsieb G., Janga S.C., Ramirez M.A., RA Jimenez-Jacinto V., Collado-Vides J., Davila G.; RT "The partitioned Rhizobium etli genome: genetic and metabolic RT redundancy in seven interacting replicons."; RL Proc. Natl. Acad. Sci. U.S.A. 103:3834-3839(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000134; ABC93038.1; -; Genomic_DNA. DR RefSeq; YP_471765.1; NC_007762.1. DR STRING; 347834.RHE_PA00176; -. DR EnsemblBacteria; ABC93038; ABC93038; RHE_PA00176. DR GeneID; 3894881; -. DR KEGG; ret:RHE_PA00176; -. DR PATRIC; 23090373; VBIRhiEtl108884_4818. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; LRMMAKS; -. DR BioCyc; RETL347834:GJJ0-5993-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 99 AA; 11318 MW; 0BD904E197453006 CRC64; MAESLSGLQR NRIHRALSRP NLLMGADREL VLITGLAAVI LIFVVLTVYS ALFGVAVWIV IVGLLRMMAK ADPLMRQVYV RHISYKHYYK ATSSPWRRY // ID Q2NC55_ERYLH Unreviewed; 94 AA. AC Q2NC55; DT 07-FEB-2006, integrated into UniProtKB/TrEMBL. DT 07-FEB-2006, sequence version 1. DT 14-MAY-2014, entry version 37. DE SubName: Full=Type IV secretion system protein B3, putative; GN OrderedLocusNames=ELI_03220; OS Erythrobacter litoralis (strain HTCC2594). OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Erythrobacteraceae; Erythrobacter. OX NCBI_TaxID=314225; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=HTCC2594; RX PubMed=19168610; DOI=10.1128/JB.00026-09; RA Oh H.M., Giovannoni S.J., Ferriera S., Johnson J., Cho J.C.; RT "Complete genome sequence of Erythrobacter litoralis HTCC2594."; RL J. Bacteriol. 191:2419-2420(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000157; ABC62736.1; -; Genomic_DNA. DR RefSeq; YP_457533.1; NC_007722.1. DR STRING; 314225.ELI_03220; -. DR EnsemblBacteria; ABC62736; ABC62736; ELI_03220. DR GeneID; 3869533; -. DR KEGG; eli:ELI_03220; -. DR PATRIC; 21858410; VBIEryLit102657_0646. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; ELIT314225:GHLE-659-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 94 AA; 10943 MW; C334F46A72A200B5 CRC64; MTDLVRHPVH RALTRPQMFA GVTMNFFIIN LMVTTIAFLI LKSFWIIPVP IITHAIGYFV SLREPRVFDL WITKVSMCPR VKNYKTWGCN SYAP // ID Q2RW85_RHORT Unreviewed; 89 AA. AC Q2RW85; DT 24-JAN-2006, integrated into UniProtKB/TrEMBL. DT 24-JAN-2006, sequence version 1. DT 14-MAY-2014, entry version 42. DE SubName: Full=Conjugal transfer protein; GN OrderedLocusNames=Rru_A0806; OS Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Rhodospirillaceae; Rhodospirillum. OX NCBI_TaxID=269796; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S.1; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., RA Hammon N., Israni S., Pitluck S., Munk A.C., Brettin T., Bruce D., RA Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M., RA Kyrpides N., Mavrommatis K., Richardson P., Zhang Y., Roberts G., RA Reslewic S., Zhou S., Schwartz D.C.; RT "Complete sequence of the chromosome of Rhodospirillum rubrum ATCC RT 11170."; RL Submitted (DEC-2005) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000230; ABC21610.1; -; Genomic_DNA. DR RefSeq; YP_425897.1; NC_007643.1. DR STRING; 269796.Rru_A0806; -. DR EnsemblBacteria; ABC21610; ABC21610; Rru_A0806. DR GeneID; 3834439; -. DR KEGG; rru:Rru_A0806; -. DR PATRIC; 23325203; VBIRhoRub82919_0861. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; AVWATKR; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; RRUB269796:GCN1-827-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Reference proteome. SQ SEQUENCE 89 AA; 9541 MW; 30D398532049CA58 CRC64; MAGTDPIDGF SVPVHRALTE PILLGGAPRT LAIANATLAA AIALGLRLWI PGLVLWLLGH GAAVWAAKHD AQFVEVIRRH LRYPAYLRA // ID Q2VLE9_BURCE Unreviewed; 103 AA. AC Q2VLE9; DT 10-JAN-2006, integrated into UniProtKB/TrEMBL. DT 10-JAN-2006, sequence version 1. DT 14-MAY-2014, entry version 19. DE SubName: Full=TrbD mating pair formation protein; GN Name=trbD; OS Burkholderia cepacia (Pseudomonas cepacia). OG Plasmid pIJB1. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Burkholderia; Burkholderia cepacia complex. OX NCBI_TaxID=292; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=2a; PLASMID=pIJB1; RA Sebastianelli A., Bruce I.J.; RL Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=2a; PLASMID=pIJB1; RA Lin Q.Y., Bruce I.J.; RL Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JX847411; AFU75998.1; -; Genomic_DNA. DR RefSeq; YP_006965859.1; NC_019378.1. DR GeneID; 13919767; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11889 MW; 5FE2187E39A54050 CRC64; MALRTIPIRR AGNRDNLFMG GDRELVMFSG LLAFALIFSA QELRATVIGL LLWFGALFAC RLMAKSDPKL RFVYLRHRKY KGYYPARSTP FRLNPNSQGK QYK // ID Q3RC97_XYLFS Unreviewed; 106 AA. AC Q3RC97; DT 25-OCT-2005, integrated into UniProtKB/TrEMBL. DT 25-OCT-2005, sequence version 1. DT 19-FEB-2014, entry version 16. DE SubName: Full=Conjugal transfer TrbD; DE Flags: Precursor; GN ORFNames=XfasaDRAFT_0201; OS Xylella fastidiosa Dixon. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xylella. OX NCBI_TaxID=155919; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Dixon; RA DOE Joint Genome Institute; RL Submitted (JUL-2002) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Dixon; RG US DOE Joint Genome Institute (JGI-ORNL); RA Larimer F., Land M.; RT "Annotation of the draft genome assembly of Xylella fastidiosa RT Dixon."; RL Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases. RN [3] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Dixon; RG US DOE Joint Genome Institute (JGI-PGF); RA Copeland A., Lucas S., Lapidus A., Barry K., Detter C., Glavina T., RA Hammon N., Israni S., Pitluck S., Richardson P.; RT "Sequencing of the draft genome and assembly of Xylella fastidiosa RT Dixon."; RL Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAAL02000016; EAO12341.1; -; Genomic_DNA. DR EnsemblBacteria; EAO12341; EAO12341; XfasaDRAFT_0201. DR PATRIC; 26341782; VBIXylFas50652_2742. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 106 AA; 12452 MW; 4C88C8BCBEB50125 CRC64; MALRTIPIRR AGNRDNLFMG GDREMVMFSG LLCAVLIFVA QDWIAAGFGL GMWFIALWLL RKIAKADPRM RFVYMRNRRY KAYYPPRATP FRNNTVFQGS QYKCFK // ID Q3YRT5_EHRCJ Unreviewed; 101 AA. AC Q3YRT5; DT 27-SEP-2005, integrated into UniProtKB/TrEMBL. DT 27-SEP-2005, sequence version 1. DT 14-MAY-2014, entry version 38. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN OrderedLocusNames=Ecaj_0534; OS Ehrlichia canis (strain Jake). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Ehrlichia. OX NCBI_TaxID=269484; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Jake; RX PubMed=16707693; DOI=10.1128/JB.01837-05; RA Mavromatis K., Doyle C.K., Lykidis A., Ivanova N., Francino M.P., RA Chain P., Shin M., Malfatti S., Larimer F., Copeland A., Detter J.C., RA Land M., Richardson P.M., Yu X.J., Walker D.H., McBride J.W., RA Kyrpides N.C.; RT "The genome of the obligately intracellular bacterium Ehrlichia canis RT reveals themes of complex membrane structure and immune evasion RT strategies."; RL J. Bacteriol. 188:4015-4023(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000107; AAZ68570.1; -; Genomic_DNA. DR RefSeq; YP_303168.1; NC_007354.1. DR STRING; 269484.Ecaj_0534; -. DR EnsemblBacteria; AAZ68570; AAZ68570; Ecaj_0534. DR GeneID; 3617955; -. DR KEGG; ecn:Ecaj_0534; -. DR PATRIC; 20574658; VBIEhrCan118076_0581. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; ECAN269484:GI02-563-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 101 AA; 11647 MW; DA4AC64178DA4C03 CRC64; MVFIMAGSVK ADQLFKGLTR PTMLFGVSYI FAMLNFMICI MIFMYTNDFR ALFILGPGIH GIGFLASSKE PLFLELFMLR MKKCSKCLNR FYHNSNSYDV M // ID Q40KB8_EHRCH Unreviewed; 97 AA. AC Q40KB8; DT 27-SEP-2005, integrated into UniProtKB/TrEMBL. DT 27-SEP-2005, sequence version 1. DT 03-APR-2013, entry version 10. DE SubName: Full=Type IV secretory pathway, VirB3-like; GN ORFNames=EchaDRAFT_0650; OS Ehrlichia chaffeensis str. Sapulpa. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Ehrlichia. OX NCBI_TaxID=332415; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Sapulpa; RG US DOE Joint Genome Institute (JGI-ORNL); RA Larimer F., Land M.; RT "Annotation of the draft genome assembly of Ehrlichia chaffeensis str. RT Sapulpa."; RL Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Sapulpa; RG US DOE Joint Genome Institute (JGI-PGF); RA Copeland A., Lucas S., Lapidus A., Barry K., Detter C., Glavina T., RA Hammon N., Israni S., Pitluck S., Richardson P.; RT "Sequencing of the draft genome and assembly of Ehrlichia chaffeensis RT str. Sapulpa."; RL Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAIF01000003; EAM86045.1; -; Genomic_DNA. DR EnsemblBacteria; EAM86045; EAM86045; EchaDRAFT_0650. DR PATRIC; 26676441; VBIEhrCha122199_0071. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 97 AA; 11170 MW; 8FB3C3C90AAE9B2A CRC64; MAGTVKADQL FKGLTRPTML FGVSYIFAML NFMICIMIFM YTNDFRALFI LGPGIHSVGF LASSKEPLFL ELFMLRMKKC SKCLNRFYHN ANSYDVM // ID Q46697_ECOLX Unreviewed; 103 AA. AC Q46697; DT 01-NOV-1996, integrated into UniProtKB/TrEMBL. DT 01-NOV-1996, sequence version 1. DT 13-NOV-2013, entry version 39. DE SubName: Full=TraA protein; GN Name=traA; OS Escherichia coli. OG Plasmid pKM101. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=562; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pKM101; RX PubMed=7891554; DOI=10.1111/j.1365-2958.1994.tb01304.x; RA Pohlman R.F., Genetti H.D., Winans S.C.; RT "Common ancestry between IncN conjugal transfer genes and RT macromolecular export systems of plant and animal pathogens."; RL Mol. Microbiol. 14:655-668(1994). RN [2] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pKM101; RX PubMed=8029323; DOI=10.1006/plas.1994.1017; RA Pohlman R.F., Genetti H.D., Winans S.C.; RT "Entry exclusion of the IncN plasmid pKM101 is mediated by a single RT hydrophilic protein containing a lipid attachment motif."; RL Plasmid 31:158-165(1994). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; U09868; AAA86451.1; -; Genomic_DNA. DR PIR; I79266; I79266. DR TCDB; 3.A.7.6.1; the type iv (conjugal dna-protein transfer or virb) secretory pathway (ivsp) family. DR PRIDE; Q46697; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11752 MW; 39143B0981BEFFB6 CRC64; MFVDGKRPLF KGATRLPRAL GVPRNVAMMI FMISASLFMI IHMWAILVFV FLRIPSAALT KYDDRMFRIM GLWLKTNSVI GLILRLSSGE DRLIPLLTTN VRV // ID Q4AC52_9SPHN Unreviewed; 103 AA. AC Q4AC52; DT 13-SEP-2005, integrated into UniProtKB/TrEMBL. DT 13-SEP-2005, sequence version 1. DT 14-MAY-2014, entry version 16. DE SubName: Full=TrbD; GN Name=trbD; OS Sphingomonas sp. A1. OG Plasmid pA1. OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; OC Sphingomonadaceae; Sphingomonas. OX NCBI_TaxID=90322; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=A1; PLASMID=pA1; RX PubMed=16445980; DOI=10.1016/j.plasmid.2005.12.002; RA Harada K.M., Aso Y., Hashimoto W., Mikami B., Murata K.; RT "Sequence and analysis of the 46.6-kb plasmid pA1 from Sphingomonas RT sp. A1 that corresponds to the typical IncP-1beta plasmid backbone RT without any accessory gene."; RL Plasmid 56:11-23(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AB231906; BAE19731.1; -; Genomic_DNA. DR RefSeq; YP_302637.1; NC_007353.2. DR GeneID; 3622630; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11872 MW; F84CECAB618924BE CRC64; MALRAIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QEVRATVFGI VLWFGALFVL RLMAKADPKL RHVYLRHRRY KPYYPARSTP FRENTPSQGK QYK // ID Q4ECR0_9RICK Unreviewed; 98 AA. AC Q4ECR0; DT 13-SEP-2005, integrated into UniProtKB/TrEMBL. DT 13-SEP-2005, sequence version 1. DT 19-FEB-2014, entry version 11. DE SubName: Full=VirB3; GN ORFNames=WwAna1496; OS Wolbachia endosymbiont of Drosophila ananassae. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=307502; RN [1] RP NUCLEOTIDE SEQUENCE. RX PubMed=15774024; DOI=10.1186/gb-2005-6-3-r23; RA Salzberg S.L., Hotopp J.C., Delcher A.L., Pop M., Smith D.R., RA Eisen M.B., Nelson W.C.; RT "Serendipitous discovery of Wolbachia genomes in multiple Drosophila RT species."; RL Genome Biol. 6:R23-R23(2005). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAGB01000009; EAL59242.1; -; Genomic_DNA. DR EnsemblBacteria; EAL59242; EAL59242; WwAna1496. DR PATRIC; 25685436; VBIWolEnd62175_0315. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10924 MW; 1342D706E24869DB CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INSNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIA // ID Q4HDH7_CAMCO Unreviewed; 922 AA. AC Q4HDH7; DT 16-AUG-2005, integrated into UniProtKB/TrEMBL. DT 16-AUG-2005, sequence version 1. DT 16-APR-2014, entry version 26. DE SubName: Full=Type IV secretion system protein VirB4; GN ORFNames=CCOA0181; OS Campylobacter coli RM2228. OG Plasmid pCC178. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=306254; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=RM2228; PLASMID=pCC178; RX PubMed=15660156; DOI=10.1371/journal.pbio.0030015; RA Fouts D.E., Mongodin E.F., Mandrell R.E., Miller W.G., Rasko D.A., RA Ravel J., Brinkac L.M., DeBoy R.T., Parker C.T., Daugherty S.C., RA Dodson R.J., Durkin A.S., Madupu R., Sullivan S.A., Shetty J.U., RA Ayodeji M.A., Shvartsbeyn A., Schatz M.C., Badger J.H., Fraser C.M., RA Nelson K.E.; RT "Major structural differences and novel potential virulence mechanisms RT from the genomes of multiple Campylobacter species."; RL PLoS Biol. 3:72-85(2005). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAFL01000018; EAL55918.1; -; Genomic_DNA. DR ProteinModelPortal; Q4HDH7; -. DR EnsemblBacteria; EAL55918; EAL55918; CCOA0181. DR PATRIC; 30464438; VBICamCol113778_1796. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 922 AA; 106206 MW; E00796FEE25CC3CF CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGS IILVAFYSQN IFLVGFSIPV FFIMKAMTKK DDFIFRLMFL KMRFFSNPAS KNYYKAKTYS TNSYRQMPPN SNFPKISVFG LNAEPNFEKL ISFSSLINDS VVITKDYLLM TTWEIGGISF EAEDDDELDI KNDLLNMLFK SFANEPVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLKKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSK QLEFYNYLLG GKFNPIRVLP SPIDQYLNGN LQNIQFGHDT IQFNQNDSTK RFARCIEIKD YTNETFAGIL DILMYLDVEY TITQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVEQID EALDQLTNGE ISFGKYHFSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN FSSLIALHNF SMGKRDKNCW GDAVSILKTP NKQPYYFNFH QSSGVNKNDF GELFLANTLI LGQSSGGKTV FMNFIVDQMM KYASKDTFPD DIPEENRKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVENT QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDN LDFPDDINLF GIDGTEFLDD KDVSEILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSVEDFLK LKNATTLIEQ SATMVFLPNP KAKEEEYVKG VGLSYDEYMI IKGFNVAKRQ FLIKRQDEKV ICTLDLSSLG NENLKILSTG TAHIDTIEKI FSQENKSLDE KVLELKEFYK NS // ID Q4HP29_CAMUP Unreviewed; 923 AA. AC Q4HP29; DT 16-AUG-2005, integrated into UniProtKB/TrEMBL. DT 16-AUG-2005, sequence version 1. DT 16-APR-2014, entry version 23. DE SubName: Full=Type IV secretion system protein VirB4; GN ORFNames=CUPA0111; OS Campylobacter upsaliensis RM3195. OG Plasmid pCU110. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=306264; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=RM3195; PLASMID=pCU110; RX PubMed=15660156; DOI=10.1371/journal.pbio.0030015; RA Fouts D.E., Mongodin E.F., Mandrell R.E., Miller W.G., Rasko D.A., RA Ravel J., Brinkac L.M., DeBoy R.T., Parker C.T., Daugherty S.C., RA Dodson R.J., Durkin A.S., Madupu R., Sullivan S.A., Shetty J.U., RA Ayodeji M.A., Shvartsbeyn A., Schatz M.C., Badger J.H., Fraser C.M., RA Nelson K.E.; RT "Major structural differences and novel potential virulence mechanisms RT from the genomes of multiple Campylobacter species."; RL PLoS Biol. 3:72-85(2005). CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AAFJ01000010; EAL52563.1; -; Genomic_DNA. DR ProteinModelPortal; Q4HP29; -. DR EnsemblBacteria; EAL52563; EAL52563; CUPA0111. DR PATRIC; 27777684; VBICamUps61687_1636. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 923 AA; 106330 MW; D1D7FFF5416BA04F CRC64; MQAIPLFKGL TRPPMIFGVP IVPLFVAMGA IFLISFYTQN IFMTILSVPV YFVMKQMAKK DDFIFHLLFL KMKFFTNPFS KKFHNVKTYS ANHYNHKQNS KNFIPKLSLF HLNAEPNFEK LIPFSSIIDE GVVITKDYLF VATYEIEGIS FETKSDEELD FKNEALNMLF KSFANESVSF YFHNIRHKIE KSLQSNFTNS YLKELDEKYY EIFKDGALYK NSLFLSIVYN PISKLEKQSF KKLSLMNKSK ELKSYLQKFK ELILRLEANL NSFEAKRLCE YEENGNLFSK QLEFYNYLLG GKFSKVRLLK SPIYEYLTGN LNSIYFNYDM AQLNYNDENK KFVRAVEIKD YSSEVHAGIL NVLMYLDIEY TITQSFQTLA RIDAKSALDK QRKQLIASED DAISQVEQLD FALDSLAGGE LSFGKYHFEM LIYGDTPKEC KDNANTVITK LNELGFMASI ANVALPSAYF STLPCNFSLR PRVNLLSSLN YSALIALHNF NRGKKNKNCW GEAVSMLKTR SKSPYYLNFH QSGGKNKDDF GEFLLANTLI LGQSSGGKTV FMNFSFNQML KYADKNTFPN DLPDEKKQFT AVYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVEST PENIRALKNI ITLCVTRKGE ILNTKEEKKL SDAVDFIMTQ FEVQERKYPI SLLLENLTED VNDDNSLKSR LLAFKQGKQF GWVFDNEFDN LDFPDSINVF GIDGTEFLDD SDINGILSYF ILWRVMNLAD GRRLVIDIDE AWKWLENDIV ANEVKNKFKT IRKQNGFLRL ATQSVEDFLK LPIAKTIIEQ SATKIFLPNP QAREEDYVGG LNLSFDEYEI IKNFQPENRN LLVKRQDESV IANFNLSSLG KENLMILSTG TAFIDTIETI FKQENKSLDE KIAELKKFYK EQK // ID Q4L0T8_HAEIF Unreviewed; 118 AA. AC Q4L0T8; DT 02-AUG-2005, integrated into UniProtKB/TrEMBL. DT 02-AUG-2005, sequence version 1. DT 14-MAY-2014, entry version 13. DE SubName: Full=TraA/VirB3-like protein; OS Haemophilus influenzae biotype aegyptius. OG Plasmid pF1947. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; OC Pasteurellaceae; Haemophilus. OX NCBI_TaxID=725; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pF1947; RA McGillivary G., Actis L.A.; RT "Haemophilus influenzae biogroup aegyptius pF1947 sequence."; RL Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AY647243; AAV40883.1; -; Genomic_DNA. DR RefSeq; YP_271706.1; NC_007206.1. DR GeneID; 3523469; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 118 AA; 13422 MW; 1BDDEDA578365B44 CRC64; MSDLNESYPS FNGMNRPAMA FGVPMVAALF VLCFMVVSGF LGSFLNWGFY SLILPTIGAL YLFFLKIVCE DDPNALAFIK WRLKAILIKK AQGNPVILLT SDSKKREVYN ARRQFKKW // ID Q7X3F0_9BACT Unreviewed; 103 AA. AC Q7X3F0; Q4LCF6; Q5W3K0; DT 01-OCT-2003, integrated into UniProtKB/TrEMBL. DT 01-OCT-2003, sequence version 1. DT 14-MAY-2014, entry version 38. DE SubName: Full=Conjugative transfer protein; DE SubName: Full=Mating pair formation protein; DE SubName: Full=TrbD; DE SubName: Full=TrbD conjugal transfer protein; DE SubName: Full=TrbD protein; DE SubName: Full=TrbD:mating pair formation protein; GN Name=trbD; ORFNames=pB8_016; OS uncultured bacterium. OG Plasmid pAKD1, Plasmid pAKD14, Plasmid pAKD15, Plasmid pAKD17, OG Plasmid pAKD18, Plasmid pAKD29, Plasmid pAKD33, Plasmid pB10, OG Plasmid pB3, Plasmid pB8, Plasmid pDS3, Plasmid pKSP212, OG Plasmid pMBUI8, Plasmid pRWC72a, and Plasmid pTP6. OC Bacteria; environmental samples. OX NCBI_TaxID=77133; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pB10; RX PubMed=14600226; DOI=10.1099/mic.0.26570-0; RA Schlueter A., Heuer H., Szczepanowski R., Forney L.J., Thomas C.M., RA Puehler A., Top E.M.; RT "The 64.508 bp IncP-1beta antibiotic multiresistance plasmid pB10 RT isolated from a wastewater treatment plant provides evidence for RT recombination between members of different branches of the IncP-1beta RT group."; RL Microbiology 149:3139-3153(2003). RN [2] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pB3; RX PubMed=15528648; DOI=10.1099/mic.0.27304-0; RA Heuer H., Szczepanowski R., Schneiker S., Puhler A., Top E.M., RA Schluter A.; RT "The complete sequences of plasmids pB2 and pB3 provide evidence for a RT recent ancestor of the IncP-1beta group without any accessory genes."; RL Microbiology 150:3591-3599(2004). RN [3] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pB8; RX PubMed=16122561; DOI=10.1016/j.plasmid.2005.03.001; RA Schlueter A., Heuer H., Szczepanowski R., Poler S.M., Schneiker S., RA Puehler A., Top E.M.; RT "Plasmid pB8 is closely related to the prototype IncP-1beta plasmid RT R751 but transfers poorly to Escherichia coli and carries a new RT transposon encoding a small multidrug resistance efflux protein."; RL Plasmid 54:135-148(2005). RN [4] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pTP6; RX PubMed=16980416; DOI=10.1128/AEM.00922-06; RA Smalla K., Haines A.S., Jones K., Krogerrecklenfort E., Heuer H., RA Schloter M., Thomas C.M.; RT "Increased abundance of IncP-1beta plasmids and mercury resistance RT genes in mercury-polluted river sediments: first discovery of IncP- RT 1beta plasmids with a complex mer transposon as the sole accessory RT element."; RL Appl. Environ. Microbiol. 72:7253-7259(2006). RN [5] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pAKD1, pAKD14, pAKD15, pAKD17, pAKD18, pAKD29, and pAKD33; RX PubMed=21948829; DOI=10.1128/AEM.05439-11; RA Sen D., Van der Auwera G.A., Rogers L.M., Thomas C.M., Brown C.J., RA Top E.M.; RT "Broad-host-range plasmids from agricultural soils have IncP-1 RT backbones with diverse accessory genes."; RL Appl. Environ. Microbiol. 77:7975-7983(2011). RN [6] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pRWC72a; RA Rahube T.O., Alexander D.C., Yost C.K.; RT "Complete nucleotide sequence of a multiple resistance plasmid pRWC72a RT isolated from a wastewater treatment plant influent."; RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases. RN [7] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pMBUI8; RX PubMed=24096417; RA Brown C.J., Sen D., Yano H., Bauer M.L., Rogers L.M., RA Van der Auwera G.A., Top E.M.; RT "Diverse broad-host-range plasmids from freshwater carry few accessory RT genes."; RL Appl. Environ. Microbiol. 79:7684-7695(2013). RN [8] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pDS3, and pKSP212; RX PubMed=22936717; DOI=10.1093/molbev/mss210; RA Sen D., Brown C.J., Top E.M., Sullivan J.; RT "Inferring the evolutionary history of IncP-1 plasmids despite RT incongruence among backbone gene trees."; RL Mol. Biol. Evol. 30:154-166(2013). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JN106164; AEV56645.1; -; Genomic_DNA. DR EMBL; JN106165; AEV56709.1; -; Genomic_DNA. DR EMBL; JN106166; AEV56764.1; -; Genomic_DNA. DR EMBL; JN106168; AEV56916.1; -; Genomic_DNA. DR EMBL; JN106169; AEV56972.1; -; Genomic_DNA. DR EMBL; JN106172; AEV57207.1; -; Genomic_DNA. DR EMBL; JN106174; AEV57322.1; -; Genomic_DNA. DR EMBL; JX469831; AFR44137.1; -; Genomic_DNA. DR EMBL; JX469834; AFR44379.1; -; Genomic_DNA. DR EMBL; JX486125; AFV47183.1; -; Genomic_DNA. DR EMBL; KC170279; AGH89087.1; -; Genomic_DNA. DR EMBL; AJ564903; CAD97490.1; -; Genomic_DNA. DR EMBL; AJ639924; CAG26001.1; -; Genomic_DNA. DR EMBL; AJ863570; CAI10750.1; -; Genomic_DNA. DR EMBL; AM048832; CAJ15591.1; -; Genomic_DNA. DR RefSeq; NP_857979.1; NC_004840.1. DR RefSeq; YP_133911.1; NC_006388.1. DR RefSeq; YP_358823.1; NC_007502.1. DR RefSeq; YP_447019.1; NC_007680.1. DR GeneID; 1245496; -. DR GeneID; 3131007; -. DR GeneID; 3726120; -. DR GeneID; 3861072; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11802 MW; 8F4CEDEE6B161847 CRC64; MALRAIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QEVRATVFGI ALWFGALFAL RLMAKADPKL RHVYLRHRRY KPYYPARSTP FRDNTPSQGK QYK // ID Q4UNC0_RICFE Unreviewed; 95 AA. AC Q4UNC0; DT 05-JUL-2005, integrated into UniProtKB/TrEMBL. DT 05-JUL-2005, sequence version 1. DT 14-MAY-2014, entry version 38. DE SubName: Full=Type IV secretory pathway, VirB3-like protein; GN Name=virB3; OrderedLocusNames=RF_0087; OS Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=315456; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC VR-1525 / URRWXCal2; RX PubMed=15984913; DOI=10.1371/journal.pbio.0030248; RA Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.E., RA Parinello H., Claverie J.M., Raoult D.; RT "The genome sequence of Rickettsia felis identifies the first putative RT conjugative plasmid in an obligate intracellular parasite."; RL PLoS Biol. 3:1-12(2005). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000053; AAY60938.1; -; Genomic_DNA. DR RefSeq; YP_246103.1; NC_007109.1. DR STRING; 315456.RF_0087; -. DR EnsemblBacteria; AAY60938; AAY60938; RF_0087. DR GeneID; 3401040; -. DR KEGG; rfe:RF_0087; -. DR PATRIC; 17890512; VBIRicFel64634_0099. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; RFEL315456:GKEK-91-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10750 MW; 7253E0673CBA777C CRC64; MAGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID Q4UW69_XANC8 Unreviewed; 103 AA. AC Q4UW69; DT 05-JUL-2005, integrated into UniProtKB/TrEMBL. DT 05-JUL-2005, sequence version 1. DT 14-MAY-2014, entry version 34. DE SubName: Full=VirB3 protein; GN OrderedLocusNames=XC_1638; OS Xanthomonas campestris pv. campestris (strain 8004). OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=314565; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=8004; RX PubMed=15899963; DOI=10.1101/gr.3378705; RA Qian W., Jia Y., Ren S.X., He Y.Q., Feng J.X., Lu L.F., Sun Q., RA Ying G., Tang D.J., Tang H., Wu W., Hao P., Wang L., Jiang B.L., RA Zeng S., Gu W.Y., Lu G., Rong L., Tian Y., Yao Z., Fu G., Chen B., RA Fang R., Qiang B., Chen Z., Zhao G.P., Tang J.L., He C.; RT "Comparative and functional genomic analyses of the pathogenicity of RT phytopathogen Xanthomonas campestris pv. campestris."; RL Genome Res. 15:757-767(2005). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000050; AAY48704.1; -; Genomic_DNA. DR RefSeq; YP_242724.1; NC_007086.1. DR STRING; 314565.XC_1638; -. DR EnsemblBacteria; AAY48704; AAY48704; XC_1638. DR GeneID; 3380093; -. DR KEGG; xcb:XC_1638; -. DR PATRIC; 24064719; VBIXanCam24967_1762. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; VENIKCK; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; XCAM314565:GCQG-1640-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 103 AA; 12245 MW; 30DE80793FCA6493 CRC64; MHKDVLFRGC TRPAMFLGVP YIPFFIGAGG GLLLGMYFNL WYLLTIPVII FVMQQVAKRD EMIFRLLGLR WLFRMRVRNI QRYSGMWVFS PNEYRKHPAG KRQ // ID Q4VR12_CAMJU Unreviewed; 922 AA. AC Q4VR12; DT 05-JUL-2005, integrated into UniProtKB/TrEMBL. DT 05-JUL-2005, sequence version 1. DT 14-MAY-2014, entry version 29. DE SubName: Full=PTet16; OS Campylobacter jejuni. OG Plasmid pTet. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=197; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=81-176; PLASMID=pTet; RA Poly F., Stintzi A.; RT "Use of a shotgun microarray for the identification of Campylobacter RT jejuni specific sequences."; RL Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AY714214; AAX31297.1; -; Genomic_DNA. DR RefSeq; YP_001004032.1; NC_008790.1. DR RefSeq; YP_247544.1; NC_007141.1. DR ProteinModelPortal; Q4VR12; -. DR GeneID; 3429172; -. DR GeneID; 4711578; -. DR KEGG; cjj:CJJ81176_pTet0028; -. DR PATRIC; 20053497; VBICamJej103413_1741. DR KO; K03199; -. DR OrthoDB; EOG6HMX9P; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 922 AA; 106297 MW; C8AB77997254E9DD CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGC IILIAFYSQN IFLVGFSIPV FFIMKAMTKR DDFIFRLMFL KMRFFSNPAS KNYHKVKTYS TNSYRQMPPN SNFPKISVFG LNAEPSFEKL IPFSSLINDS VVITKDYFLM TTWEIGGISF EAEEDDELDI KNDLLNMLFK SFANESVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLRKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSK QLEFYNYLLG GKFNPIRVLP SPIEQYLNGN LQNIQFGHDT IQFNQNDSTK KFARCIEIKD YTNETFAGIL DILMYLDVEY TVTQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVEQID EALDQLTNGE ISFGKYHFSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN YSSLIALHNF SMGKRDKNCW GDAVSILKTP NKQPYYFNFH QSSGANKNDF GKFFLANTLI LGQSSGGKTV FMNFIVDQMM KYASKDTFPD DIPEDKRKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVEST QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDN LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSLEDFLK LKNAATLIEQ SSTMVFLSNP KAKEEEYVKG VGLSYDEYMI IKGFNPVKRQ FLIKRQDEKV ICTLDLSPLG NENLKILSTE TAYIDVIEKI FSQENKSLDE KVLELKEIYK NS // ID Q52SK5_9RICK Unreviewed; 98 AA. AC Q52SK5; DT 24-MAY-2005, integrated into UniProtKB/TrEMBL. DT 11-JUL-2006, sequence version 2. DT 08-MAR-2011, entry version 12. DE SubName: Full=VirB3; GN Name=virB3; OS Wolbachia endosymbiont of Armadillidium vulgare. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=77039; RN [1] RP NUCLEOTIDE SEQUENCE. RX PubMed=18582562; DOI=10.1016/j.resmic.2008.05.007; RA Felix C., Pichon S., Braquart-Varnier C., Braig H., Chen L., RA Garrett R.A., Martin G., Greve P.; RT "Characterization and transcriptional analysis of two gene clusters RT for type IV secretion machinery in Wolbachia of Armadillidium RT vulgare."; RL Res. Microbiol. 159:481-485(2008). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=WVulM, and WVulP; RA Pichon S., Bouchon D., Cordaux R., Chen L., Garrett R.A., Greve P.; RT "Conservation of the Type IV Secretion System throughout Wolbachia RT evolution."; RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AY967766; AAX86700.2; -; Genomic_DNA. DR EMBL; FJ223239; ACO52105.1; -; Genomic_DNA. DR EMBL; FJ223240; ACO52106.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 98 AA; 10982 MW; 7832D001E65869DE CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INTNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANTYDIT // ID Q5FEQ8_EHRRW Unreviewed; 99 AA. AC Q5FEQ8; DT 01-MAR-2005, integrated into UniProtKB/TrEMBL. DT 01-MAR-2005, sequence version 1. DT 14-MAY-2014, entry version 35. DE SubName: Full=Putative uncharacterized protein; GN OrderedLocusNames=ERWE_CDS_05520; OS Ehrlichia ruminantium (strain Welgevonden). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Ehrlichia. OX NCBI_TaxID=254945; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Welgevonden [CIRAD]; RX PubMed=16547041; DOI=10.1128/JB.188.7.2533-2542.2006; RA Frutos R., Viari A., Ferraz C., Morgat A., Eychenie S., Kandassamy Y., RA Chantal I., Bensaid A., Coissac E., Vachiery N., Demaille J., RA Martinez D.; RT "Comparative genomic analysis of three strains of Ehrlichia RT ruminantium reveals an active process of genome size plasticity."; RL J. Bacteriol. 188:2533-2542(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CR925678; CAI27046.1; -; Genomic_DNA. DR RefSeq; YP_197428.1; NC_006832.1. DR STRING; 254945.Erum5260; -. DR EnsemblBacteria; CAI27046; CAI27046; ERWE_CDS_05520. DR GeneID; 3260635; -. DR KEGG; erw:ERWE_CDS_05520; -. DR PATRIC; 20580948; VBIEhrRum92411_0585. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR BioCyc; ERUM254945:GJ2L-580-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 99 AA; 11433 MW; 1C8626FEA3C458FF CRC64; MFMAGTVKAD QLFKGLTRPT MLFGVSYIFA MLNFMICIML FMYTNDFRAL FILGPGIHGI GFLASSKEPL FLELFMLRMK KCSKCLNRFY HNANSYDVM // ID Q5FFK7_EHRRG Unreviewed; 99 AA. AC Q5FFK7; DT 01-MAR-2005, integrated into UniProtKB/TrEMBL. DT 01-MAR-2005, sequence version 1. DT 14-MAY-2014, entry version 39. DE SubName: Full=Putative uncharacterized protein; GN OrderedLocusNames=ERGA_CDS_05410; OS Ehrlichia ruminantium (strain Gardel). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Ehrlichia. OX NCBI_TaxID=302409; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Gardel; RX PubMed=16547041; DOI=10.1128/JB.188.7.2533-2542.2006; RA Frutos R., Viari A., Ferraz C., Morgat A., Eychenie S., Kandassamy Y., RA Chantal I., Bensaid A., Coissac E., Vachiery N., Demaille J., RA Martinez D.; RT "Comparative genomic analysis of three strains of Ehrlichia RT ruminantium reveals an active process of genome size plasticity."; RL J. Bacteriol. 188:2533-2542(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CR925677; CAI27993.1; -; Genomic_DNA. DR RefSeq; YP_196467.1; NC_006831.1. DR STRING; 302409.ERGA_CDS_05410; -. DR EnsemblBacteria; CAI27993; CAI27993; ERGA_CDS_05410. DR GeneID; 3268540; -. DR KEGG; erg:ERGA_CDS_05410; -. DR PATRIC; 20578842; VBIEhrRum72196_0575. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; ERUM302409:GHVW-569-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 99 AA; 11433 MW; 1C8626FEA3C458FF CRC64; MFMAGTVKAD QLFKGLTRPT MLFGVSYIFA MLNFMICIML FMYTNDFRAL FILGPGIHGI GFLASSKEPL FLELFMLRMK KCSKCLNRFY HNANSYDVM // ID Q5GRF2_ALCXX Unreviewed; 103 AA. AC Q5GRF2; DT 01-MAR-2005, integrated into UniProtKB/TrEMBL. DT 01-MAR-2005, sequence version 1. DT 14-MAY-2014, entry version 19. DE SubName: Full=Mating pair formation protein TrbD; GN Name=trbD; OS Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans). OG Plasmid pA81. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Alcaligenaceae; Achromobacter. OX NCBI_TaxID=85698; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=A8; PLASMID=pA81; RA Jencova V., Strnad H., Chodora Z., Ulbrich P., Hickey W.J., Paces V.; RT "Chlorocatechol catabolic enzymes from Achromobacter xylosoxidans RT A8."; RL Int. Biodeterior. Biodegradation 54:175-181(2004). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=A8; PLASMID=pA81; RA Jencova V.; RT "Analysis of large plasmid from chlorobenzoic acids degrading strain RT Achromobacter xylosoxidans A8."; RL Submitted (JAN-2005) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AJ515144; CAI47816.1; -; Genomic_DNA. DR RefSeq; YP_003982542.1; NC_014641.1. DR RefSeq; YP_195832.1; NC_006830.1. DR GeneID; 3267804; -. DR GeneID; 9900873; -. DR KEGG; axy:AXYL_06538; -. DR PATRIC; 42566191; VBIAchXyl160325_6545. DR KO; K03198; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11860 MW; D54CECAB78AD75E2 CRC64; MALRAIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QEVRATVFGI ALWFGALFVL RLMAKSDPKL RHVYLRHRRY KPYYPARSTP FRENTPSQGK QYK // ID Q5GRI8_WOLTR Unreviewed; 98 AA. AC Q5GRI8; DT 01-MAR-2005, integrated into UniProtKB/TrEMBL. DT 01-MAR-2005, sequence version 1. DT 14-MAY-2014, entry version 40. DE SubName: Full=Type IV secretory pathway, VirB3 components; GN OrderedLocusNames=Wbm0798; OS Wolbachia sp. subsp. Brugia malayi (strain TRS). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=292805; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=TRS; RX PubMed=15780005; DOI=10.1371/journal.pbio.0030121; RA Foster J., Ganatra M., Kamal I., Ware J., Makarova K., Ivanova N., RA Bhattacharyya A., Kapatral V., Kumar S., Posfai J., Vincze T., RA Ingram J., Moran L., Lapidus A., Omelchenko M., Kyrpides N., RA Ghedin E., Wang S., Goltsman E., Joukov V., Ostrovskaya O., RA Tsukerman K., Mazur M., Comb D., Koonin E., Slatko B.; RT "The Wolbachia genome of Brugia malayi: endosymbiont evolution within RT a human pathogenic nematode."; RL PLoS Biol. 3:599-614(2005). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AE017321; AAW71386.1; -; Genomic_DNA. DR RefSeq; YP_198628.1; NC_006833.1. DR ProteinModelPortal; Q5GRI8; -. DR STRING; 292805.Wbm0798; -. DR EnsemblBacteria; AAW71386; AAW71386; Wbm0798. DR GeneID; 3266738; -. DR KEGG; wbm:Wbm0798; -. DR PATRIC; 24033915; VBIWolEnd7741_1310. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; WPNISIM; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; WEND292805:GH18-925-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 98 AA; 10994 MW; 1A27C00D8FE9B9DB CRC64; MSTGSIQTDQ LFKGLTRPAM LFGVSYMFAI LNVLICMLIF INSNDLRIIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYY GANSYDIT // ID Q5HB05_EHRRW Unreviewed; 97 AA. AC Q5HB05; DT 15-FEB-2005, integrated into UniProtKB/TrEMBL. DT 15-FEB-2005, sequence version 1. DT 14-MAY-2014, entry version 28. DE SubName: Full=Type IV secretion system protein VirB3; GN Name=virB3; OrderedLocusNames=Erum5260; OS Ehrlichia ruminantium (strain Welgevonden). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Ehrlichia. OX NCBI_TaxID=254945; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Welgevonden [ARC-OVI]; RX PubMed=15637156; DOI=10.1073/pnas.0406633102; RA Collins N.E., Liebenberg J., de Villiers E.P., Brayton K.A., Louw E., RA Pretorius A., Faber F.E., van Heerden H., Josemans A., van Kleef M., RA Steyn H.C., van Strijp M.F., Zweygarth E., Jongejan F., Maillard J.C., RA Berthier D., Botha M., Joubert F., Corton C.H., Thomson N.R., RA Allsopp M.T., Allsopp B.A.; RT "The genome of the heartwater agent Ehrlichia ruminantium contains RT multiple tandem repeats of actively variable copy number."; RL Proc. Natl. Acad. Sci. U.S.A. 102:838-843(2005). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CR767821; CAH58255.1; -; Genomic_DNA. DR RefSeq; YP_180389.1; NC_005295.2. DR EnsemblBacteria; CAH58255; CAH58255; Erum5260. DR GeneID; 3232799; -. DR KEGG; eru:Erum5260; -. DR PATRIC; 20583079; VBIEhrRum203725_0595. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OrthoDB; EOG6N3CWS; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 97 AA; 11154 MW; 674015C80FAE9E3C CRC64; MAGTVKADQL FKGLTRPTML FGVSYIFAML NFMICIMLFM YTNDFRALFI LGPGIHGIGF LASSKEPLFL ELFMLRMKKC SKCLNRFYHN ANSYDVM // ID Q5I722_DICNO Unreviewed; 114 AA. AC Q5I722; DT 15-FEB-2005, integrated into UniProtKB/TrEMBL. DT 15-FEB-2005, sequence version 1. DT 09-JAN-2013, entry version 11. DE SubName: Full=VirB3; GN Name=virB3; OS Dichelobacter nodosus (Bacteroides nodosus). OC Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; OC Cardiobacteriaceae; Dichelobacter. OX NCBI_TaxID=870; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=C305-1; RX PubMed=19327404; DOI=10.1016/j.anaerobe.2009.02.005; RA Tanjung L.R., Whittle G., Shaw B.E., Bloomfield G.A., Katz M.E., RA Cheetham B.F.; RT "The intD mobile genetic element from Dichelobacter nodosus, the RT causative agent of ovine footrot, is associated with the benign RT phenotype."; RL Anaerobe 15:219-224(2009). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AY847513; AAW31824.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 114 AA; 13032 MW; 32A4AB648C289E6D CRC64; MSEKLTAPLF RGATRPPMMF GVPTEVLVKV IAPFLLLAFM IYPFCKLWTL LLAIPVVFIT MIMRDLTKRD DQYLSMLFIE LRQSSLLIRN AIGTGIHRVK VIPPRAIKQE SVNE // ID Q5NWM4_AROAE Unreviewed; 103 AA. AC Q5NWM4; DT 04-JAN-2005, integrated into UniProtKB/TrEMBL. DT 04-JAN-2005, sequence version 1. DT 14-MAY-2014, entry version 42. DE SubName: Full=Conjugation protein protein TrbD; GN Name=trbD; ORFNames=p2D1; OS Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)). OG Plasmid pAzo2. OC Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; OC Rhodocyclaceae; Aromatoleum. OX NCBI_TaxID=76114; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=EbN1; RX PubMed=15551059; DOI=10.1007/s00203-004-0742-9; RA Rabus R., Kube M., Heider J., Beck A., Heitmann K., Widdel F., RA Reinhardt R.; RT "The genome sequence of an anaerobic aromatic-degrading denitrifying RT bacterium, strain EbN1."; RL Arch. Microbiol. 183:27-36(2005). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CR555308; CAI10540.1; -; Genomic_DNA. DR RefSeq; YP_195564.1; NC_006824.1. DR STRING; 76114.p2D1; -. DR EnsemblBacteria; CAI10540; CAI10540; p2D1. DR GeneID; 3267395; -. DR KEGG; eba:p2D1; -. DR PATRIC; 20974865; VBIAroAro98752_4345. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; LRMMAKS; -. DR OrthoDB; EOG6N6849; -. DR BioCyc; AARO76114:GJTA-4197-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 103 AA; 11900 MW; 5F303224AA4A9A2C CRC64; MALRSIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QEVRATMFGI ALWFGALFVL RLMAKGDPKM RHVYLRHRRY KAYYPPRSTP FRENTTSQGK QYK // ID Q5PAD8_ANAMM Unreviewed; 98 AA. AC Q5PAD8; DT 04-JAN-2005, integrated into UniProtKB/TrEMBL. DT 04-JAN-2005, sequence version 1. DT 14-MAY-2014, entry version 36. DE SubName: Full=VirB3 protein; GN Name=virB3; OrderedLocusNames=AM815; OS Anaplasma marginale (strain St. Maries). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Anaplasma. OX NCBI_TaxID=234826; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=St. Maries; RX PubMed=15618402; DOI=10.1073/pnas.0406656102; RA Brayton K.A., Kappmeyer L.S., Herndon D.R., Dark M.J., Tibbals D.L., RA Palmer G.H., McGuire T.C., Knowles D.P.Jr.; RT "Complete genome sequencing of Anaplasma marginale reveals that the RT surface is skewed to two superfamilies of outer membrane proteins."; RL Proc. Natl. Acad. Sci. U.S.A. 102:844-849(2005). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP000030; AAV86742.1; -; Genomic_DNA. DR RefSeq; YP_153997.1; NC_004842.2. DR STRING; 234826.AM815; -. DR EnsemblBacteria; AAV86742; AAV86742; AM815. DR GeneID; 3171140; -. DR KEGG; ama:AM815; -. DR PATRIC; 20947575; VBIAnaMar46146_0703. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; EREYGTE; -. DR OrthoDB; EOG6N3CWS; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 98 AA; 11111 MW; 3AF2270396562EC6 CRC64; MSSGSVKTDQ LFKGLTRPTM LFGVSYTFAI LNFMISIMLF MYSNDFRVLL VLAPGMHAIG FAASAKDPLF MDLFVIKMQK CSKCLNRFYH NANSYDVM // ID Q5X070_LEGPL Unreviewed; 93 AA. AC Q5X070; DT 23-NOV-2004, integrated into UniProtKB/TrEMBL. DT 23-NOV-2004, sequence version 1. DT 14-MAY-2014, entry version 41. DE SubName: Full=Legionella vir homologue protein; GN Name=lvhB3; OrderedLocusNames=lpl0152; OS Legionella pneumophila (strain Lens). OC Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; OC Legionellaceae; Legionella. OX NCBI_TaxID=297245; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Lens; RX PubMed=15467720; DOI=10.1038/ng1447; RA Cazalet C., Rusniok C., Bruggemann H., Zidane N., Magnier A., Ma L., RA Tichit M., Jarraud S., Bouchier C., Vandenesch F., Kunst F., RA Etienne J., Glaser P., Buchrieser C.; RT "Evidence in the Legionella pneumophila genome for exploitation of RT host cell functions and high genome plasticity."; RL Nat. Genet. 36:1165-1173(2004). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CR628337; CAH14381.1; -; Genomic_DNA. DR RefSeq; YP_125528.1; NC_006369.1. DR STRING; 297245.lpl0152; -. DR EnsemblBacteria; CAH14381; CAH14381; lpl0152. DR GeneID; 3115145; -. DR KEGG; lpf:lpl0152; -. DR PATRIC; 22313743; VBILegPne33733_0222. DR LegioList; lpl0152; -. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; IIFIPLH; -. DR OrthoDB; EOG6RC3SC; -. DR BioCyc; LPNE297245:GJD4-157-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 10739 MW; E87FA01A1A918D01 CRC64; MSDLEISPIF NALTRPAMTA GVTFEYHMLN LIVSMCAFIG FSPLYGLIFI PLHVFGWLVC RYDTHFFTIC AKRFLLPEAP NTSLWRVRAY EPF // ID Q5X8S7_LEGPA Unreviewed; 93 AA. AC Q5X8S7; DT 23-NOV-2004, integrated into UniProtKB/TrEMBL. DT 23-NOV-2004, sequence version 1. DT 14-MAY-2014, entry version 40. DE SubName: Full=Legionella vir homologue protein; GN Name=lvhB3; OrderedLocusNames=lpp0170; OS Legionella pneumophila (strain Paris). OC Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; OC Legionellaceae; Legionella. OX NCBI_TaxID=297246; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Paris; RX PubMed=15467720; DOI=10.1038/ng1447; RA Cazalet C., Rusniok C., Bruggemann H., Zidane N., Magnier A., Ma L., RA Tichit M., Jarraud S., Bouchier C., Vandenesch F., Kunst F., RA Etienne J., Glaser P., Buchrieser C.; RT "Evidence in the Legionella pneumophila genome for exploitation of RT host cell functions and high genome plasticity."; RL Nat. Genet. 36:1165-1173(2004). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CR628336; CAH11317.1; -; Genomic_DNA. DR RefSeq; YP_122516.1; NC_006368.1. DR STRING; 297246.lpp0170; -. DR EnsemblBacteria; CAH11317; CAH11317; lpp0170. DR GeneID; 3119304; -. DR KEGG; lpp:lpp0170; -. DR PATRIC; 22320498; VBILegPne27771_0330. DR LegioList; lpp0170; -. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; IIFIPLH; -. DR OrthoDB; EOG6RC3SC; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 93 AA; 10738 MW; F462101A1A918904 CRC64; MSDLEISPIF NALTRPAMTA GVTFEYHMLN LIVSMCAFIG FSPLYGIIFI PLHVFGWLVC RYDTHFFTIC AKRFLLPQAP NTSLWRVRAY EPF // ID Q5ZHH9_9BACT Unreviewed; 103 AA. AC Q5ZHH9; DT 23-NOV-2004, integrated into UniProtKB/TrEMBL. DT 23-NOV-2004, sequence version 1. DT 14-MAY-2014, entry version 32. DE SubName: Full=Conjugal transfer protein TrbD; DE SubName: Full=Conjugal transfer protein trbD; DE SubName: Full=Mating pair formation protein; DE SubName: Full=Putative ATPase; GN Name=trbD; ORFNames=PB11_0007, PB5_0007, PSP21_0006, pWEC911_0006; OS uncultured bacterium. OG Plasmid PB11, Plasmid PB5, Plasmid PSP21, Plasmid pG527, OG Plasmid pTB11, and Plasmid pWEC911. OC Bacteria; environmental samples. OX NCBI_TaxID=77133; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pTB11; RX PubMed=15848226; DOI=10.1016/j.plasmid.2004.09.004; RA Tennstedt T., Szczepanowski R., Krahn I., Puehler A., Schlueter A.; RT "Sequence of the 68,869 bp IncP-1alpha plasmid pTB11 from a waste- RT water treatment plant reveals a highly conserved backbone, a Tn402- RT like integron and other transposable elements."; RL Plasmid 53:218-238(2005). RN [2] RP NUCLEOTIDE SEQUENCE. RC PLASMID=PB11, PB5, and PSP21; RX PubMed=21115076; DOI=10.1016/j.jbiotec.2010.11.018; RA Szczepanowski R., Eikmeyer F., Harfmann J., Blom J., Rogers L.M., RA Top E.M., Schluter A.; RT "Sequencing and comparative analysis of IncP-1? antibiotic resistance RT plasmids reveal a highly conserved backbone and differences within RT accessory regions."; RL J. Biotechnol. 155:95-103(2011). RN [3] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pG527, and pWEC911; RX PubMed=22936717; DOI=10.1093/molbev/mss210; RA Sen D., Brown C.J., Top E.M., Sullivan J.; RT "Inferring the evolutionary history of IncP-1 plasmids despite RT incongruence among backbone gene trees."; RL Mol. Biol. Evol. 30:154-166(2013). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002151; ADU90716.1; -; Genomic_DNA. DR EMBL; CP002152; ADU90798.1; -; Genomic_DNA. DR EMBL; CP002153; ADU90882.1; -; Genomic_DNA. DR EMBL; JX469830; AFR44042.1; -; Genomic_DNA. DR EMBL; JX469833; AFR44287.1; -; Genomic_DNA. DR EMBL; AJ744860; CAG30862.1; -; Genomic_DNA. DR RefSeq; YP_006941338.1; NC_019020.1. DR RefSeq; YP_006941419.1; NC_019021.1. DR RefSeq; YP_006941503.1; NC_019022.1. DR RefSeq; YP_112371.1; NC_006352.1. DR GeneID; 13881865; -. DR GeneID; 13881934; -. DR GeneID; 13882019; -. DR GeneID; 3101961; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 12085 MW; C1D63A178E30DEF7 CRC64; MALRTIPIRR AGNRENLFMG GDRELVMFSG LMAFALIFSA QELRATVVGL ILWFGALYAF RIMAKADPKM RFVYLRHRRY KPYYPARSTP FRENTNSQGK QYR // ID Q5ZW32_LEGPH Unreviewed; 76 AA. AC Q5ZW32; DT 23-NOV-2004, integrated into UniProtKB/TrEMBL. DT 23-NOV-2004, sequence version 1. DT 14-MAY-2014, entry version 37. DE SubName: Full=LvhB3; GN OrderedLocusNames=lpg1255; OS Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / OS ATCC 33152 / DSM 7513). OC Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; OC Legionellaceae; Legionella. OX NCBI_TaxID=272624; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Philadelphia 1 / ATCC 33152 / DSM 7513; RX PubMed=15448271; DOI=10.1126/science.1099776; RA Chien M., Morozova I., Shi S., Sheng H., Chen J., Gomez S.M., RA Asamani G., Hill K., Nuara J., Feder M., Rineer J., Greenberg J.J., RA Steshenko V., Park S.H., Zhao B., Teplitskaya E., Edwards J.R., RA Pampou S., Georghiou A., Chou I.C., Iannuccilli W., Ulz M.E., RA Kim D.H., Geringer-Sameth A., Goldsberry C., Morozov P., Fischer S.G., RA Segal G., Qu X., Rzhetsky A., Zhang P., Cayanis E., De Jong P.J., RA Ju J., Kalachikov S., Shuman H.A., Russo J.J.; RT "The genomic sequence of the accidental pathogen Legionella RT pneumophila."; RL Science 305:1966-1968(2004). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AE017354; AAU27339.1; -; Genomic_DNA. DR RefSeq; YP_095286.1; NC_002942.5. DR STRING; 272624.lpg1255; -. DR EnsemblBacteria; AAU27339; AAU27339; lpg1255. DR GeneID; 3077729; -. DR KEGG; lpn:lpg1255; -. DR PATRIC; 22329588; VBILegPne29832_1319. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; THRYMAS; -. DR OrthoDB; EOG6RC3SC; -. DR BioCyc; LPNE272624:GHDI-1254-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 76 AA; 8882 MW; 98925BB69BB53F2A CRC64; MTAGVTFEYH MLNLIVSMCA FIGFSPLYGL IFIPLHVFGW LVCRYDTHFF TICAKRFLLP EAPNTSLWRV RAYEPF // ID Q60211_9ZZZZ Unreviewed; 103 AA. AC Q60211; Q52362; DT 01-NOV-1996, integrated into UniProtKB/TrEMBL. DT 01-NOV-1996, sequence version 1. DT 13-NOV-2013, entry version 32. DE SubName: Full=KlbC protein; GN Name=klbC; OS Plasmid RK2. OG Plasmid RK2. OC other sequences; plasmids. OX NCBI_TaxID=2502; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=RK2; RX PubMed=8468300; RA Thompson V.J., Jovanovic O.S., Pohlman R.F., Chang C.-H., RA Figurski D.H.; RT "Structure, function, and regulation of the kilB locus of promiscuous RT plasmid RK2."; RL J. Bacteriol. 175:2423-2435(1993). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; L05600; AAA26407.1; -; Genomic_DNA. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 12085 MW; C1D63A178E30DEF7 CRC64; MALRTIPIRR AGNRENLFMG GDRELVMFSG LMAFALIFSA QELRATVVGL ILWFGALYAF RIMAKADPKM RFVYLRHRRY KPYYPARSTP FRENTNSQGK QYR // ID Q663E8_YERPS Unreviewed; 915 AA. AC Q663E8; DT 11-OCT-2004, integrated into UniProtKB/TrEMBL. DT 11-OCT-2004, sequence version 1. DT 14-MAY-2014, entry version 46. DE SubName: Full=TriC protein; GN Name=triC; OrderedLocusNames=pYptb0006; OS Yersinia pseudotuberculosis serotype I (strain IP32953). OG Plasmid pYptb32953. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Yersinia. OX NCBI_TaxID=273123; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=IP32953; RX PubMed=15358858; DOI=10.1073/pnas.0404012101; RA Chain P.S.G., Carniel E., Larimer F.W., Lamerdin J., Stoutland P.O., RA Regala W.M., Georgescu A.M., Vergez L.M., Land M.L., Motin V.L., RA Brubaker R.R., Fowler J., Hinnebusch J., Marceau M., Medigue C., RA Simonet M., Chenal-Francisque V., Souza B., Dacheux D., Elliott J.M., RA Derbise A., Hauser L.J., Garcia E.; RT "Insights into the evolution of Yersinia pestis through whole-genome RT comparison with Yersinia pseudotuberculosis."; RL Proc. Natl. Acad. Sci. U.S.A. 101:13826-13831(2004). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; BX936400; CAF25448.1; -; Genomic_DNA. DR RefSeq; YP_068514.1; NC_006154.1. DR ProteinModelPortal; Q663E8; -. DR STRING; 273123.pYptb0006; -. DR EnsemblBacteria; CAF25448; CAF25448; pYptb0006. DR GeneID; 2953027; -. DR KEGG; yps:pYptb0006; -. DR PATRIC; 18637961; VBIYerPse22266_0107. DR HOGENOM; HOG000119263; -. DR KO; K03199; -. DR OMA; RYFRIRT; -. DR OrthoDB; EOG6HMX9P; -. DR BioCyc; YPSE273123:GI1M-4201-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 915 AA; 102483 MW; 18B8780F9BF32478 CRC64; MTTIFKALTR PAMILGVPII PLIIAMSGIS LAAVYTTTKF FFLIPVAWWY MRHLARKDAH IFSLMGLKIR TKGNGKTNQH FDSTAWLAND YGDVDITEFL NAMRLNERVT LTDKIPYSSH VHEYIIKGKN SDLMASWEVG GSVFEFETDE QKNMKSAQLN TLIKSFEGEP VTFYIHNSRE NYHDSFQQNS GNAFADEVAK RYYEGMEGDA FYRNRLFLTV CMMPPSTLGK AERKGMSAGQ KQRSLDGAIK RMQEIRATLN TALTPLHATP LGTFEEDGVV YSSQLSFYHF LLTGIWQKIR VTRTPFYEVL GTADLFFSGA SGQRNTIRGT EFFRTLEIKD YSPKSVTGLL DVLLHAPCNY VLTQSYTCMA KDEGQEAIKT VEKRLSSAED DAVSQQTDLL VARDLLQSGH IAFGLYHFSL LISAPTLEAL VKDTNTLANG LTNAGIVSTL ASLSLAAGYF AQMPGVYTLR PRLVPVSSQN FVEMASFHNF SEGKRDRVPW GEAVAVVKTP SGGAHYLNIH NTLLGKDDFN EKNAGNASIV GTIGSGKTML ISWLANMMQK YRQQSSFSPH AKKKRLCTVV LDKDRGTELN IRQLGGRYFR VKSGEPTGWN PFRLKPTKRN IDFIKKLMKL LCTRNGNTLS TRQETRLSDA VDAVMLGLDH ASRDHGITRV LENITEPATM EAQENGLKIR LAQWAKGGEF GWVFDNEEDT FDISECDIFG IDGTEFLDDS DVCAPISFYL LYRITSLLDG RRLVLFIDEV WKWLNDPAFK KLMFNLLKTI RKLNGLVIPA TQSPSDLLKS SISTAMVEQC GTQFFLPNPM AEYKDYVEGL KVPPAVFEVI KGLDPLSRQF VLIKSPLRKG DTERFAVLVT LDLSGLGKYT KILSGSEDNL AIFDSIFTEG MAPEEWRDTF LAQAI // ID Q68E81_AERCA Unreviewed; 106 AA. AC Q68E81; DT 11-OCT-2004, integrated into UniProtKB/TrEMBL. DT 11-OCT-2004, sequence version 1. DT 14-MAY-2014, entry version 19. DE SubName: Full=VirB3 protein; GN Name=virb3; ORFNames=pFBAOT6.27; OS Aeromonas caviae (Aeromonas punctata). OC Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; OC Aeromonadaceae; Aeromonas. OX NCBI_TaxID=648; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=HGB5; RX PubMed=15574953; DOI=10.1128/AEM.70.12.7497-7510.2004; RA Rhodes G., Parkhill J., Bird C., Ambrose K., Jones M., Huys G., RA Swings J., Pickup R.W.; RT "Complete nucleotide sequence of the conjugative tetracycline RT resistance plasmid pFBAOT6, a member of a group of IncU plasmids with RT global ubiquity."; RL Appl. Environ. Microbiol. 70:7497-7510(2004). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CR376602; CAG15075.1; -; Genomic_DNA. DR RefSeq; YP_067838.1; NC_006143.1. DR GeneID; 2949679; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 106 AA; 11906 MW; B5C40D7CC5F3A4D1 CRC64; MATATDPLFV GATRPSLVMG VTYEAIIICV SIVGMLFLAT NNPFLLLFYI PMHGACYLIC LKDPRFFRFL LLWLGTKAKS ISWRYWGAAT ASPRVSTRKQ SRRMPG // ID Q68XX0_RICTY Unreviewed; 95 AA. AC Q68XX0; DT 11-OCT-2004, integrated into UniProtKB/TrEMBL. DT 11-OCT-2004, sequence version 1. DT 14-MAY-2014, entry version 36. DE SubName: Full=Probable type IV secretory system protein VirB3; GN Name=virB3; OrderedLocusNames=RT0034; OS Rickettsia typhi (strain ATCC VR-144 / Wilmington). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; typhus group. OX NCBI_TaxID=257363; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC VR-144 / Wilmington; RX PubMed=15317790; DOI=10.1128/JB.186.17.5842-5855.2004; RA McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., RA Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., RA Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., RA Gibbs R.A., Hong C., Yu X.J., Walker D.H., Weinstock G.M.; RT "Complete genome sequence of Rickettsia typhi and comparison with RT sequences of other Rickettsiae."; RL J. Bacteriol. 186:5842-5855(2004). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AE017197; AAU03522.1; -; Genomic_DNA. DR RefSeq; YP_067004.1; NC_006142.1. DR STRING; 257363.RT0034; -. DR EnsemblBacteria; AAU03522; AAU03522; RT0034. DR GeneID; 2958672; -. DR KEGG; rty:RT0034; -. DR PATRIC; 17909218; VBIRicTyp34752_0032. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; RTYP257363:GJEQ-35-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 95 AA; 10782 MW; 5866E98AFE236A2A CRC64; MSGTLASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AGALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID Q69BA6_CAMJU Unreviewed; 883 AA. AC Q69BA6; DT 13-SEP-2004, integrated into UniProtKB/TrEMBL. DT 13-SEP-2004, sequence version 1. DT 14-MAY-2014, entry version 30. DE SubName: Full=CmgB3/4; OS Campylobacter jejuni. OG Plasmid pTet. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=197; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=81-176; PLASMID=pTet; RX PubMed=15470128; DOI=10.1099/mic.0.27112-0; RA Batchelor R.A., Pearson B.M., Friis L.M., Guerry P., Wells J.M.; RT "Nucleotide sequences and comparison of two large conjugative plasmids RT from different Campylobacter species."; RL Microbiology 150:3507-3517(2004). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AY394561; AAR29564.1; -; Genomic_DNA. DR RefSeq; YP_063475.1; NC_006135.1. DR ProteinModelPortal; Q69BA6; -. DR GeneID; 4600274; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 883 AA; 101872 MW; 5E32F12790A2C433 CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGC IILIAFYSQN IFLVGFSIPV FFIMKAMTKR DDFIFRLMFL KMRFFSNPAS KNYHKVKTYS TNSYRQMPPN SNFPKISVFG LNAEPSFEKL IPFSSLINDS VVITKDYFLM TTWEIGGISF EAEEDDELDI KNDLLNMLFK SFANESVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLRKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSK QLEFYNYLLG GKFNPIRVLP SPIEQYLNGN LQNIQFGHDT IQFNQNDSTK KFARCIEIKD YTNETFAGIL DILMYLDVEY TVTQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVEQID EALDQLTNGE ISFGKYHFSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN YSSLIALHNF SMGKRDKNCW GDAVSILKTP NKQPYYFNFH QSSGANKNDF GKFFLANTLI LGQSSGGKTV FMNFIVDQMM KYASKDTFPD DIPEDKRKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVEST QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDN LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSLEDFLK LKNAATLIEQ SSTMVFLSNP KAKEEEYVKG VGLSYDEYMI IKGFNPVKRQ FLIKRQDEKV ICTLDLSPWV MKI // ID Q69BF6_CAMCO Unreviewed; 922 AA. AC Q69BF6; DT 13-SEP-2004, integrated into UniProtKB/TrEMBL. DT 13-SEP-2004, sequence version 1. DT 14-MAY-2014, entry version 28. DE SubName: Full=CmgB3/4; OS Campylobacter coli. OG Plasmid pCC31. OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OX NCBI_TaxID=195; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pCC31; RX PubMed=15470128; DOI=10.1099/mic.0.27112-0; RA Batchelor R.A., Pearson B.M., Friis L.M., Guerry P., Wells J.M.; RT "Nucleotide sequences and comparison of two large conjugative plasmids RT from different Campylobacter species."; RL Microbiology 150:3507-3517(2004). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AY394560; AAR29514.1; -; Genomic_DNA. DR RefSeq; YP_063425.1; NC_006134.1. DR ProteinModelPortal; Q69BF6; -. DR GeneID; 3205008; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 922 AA; 106331 MW; 5C46272226AE23BA CRC64; MEKNPLFKGL TRPPMIFGVP MTPFVIAMGC IILIAFYSQN IFLVGFSIPV FFIMKAMTKK DDFIFRLMFL KMRFFSNPAS KNYYKAKTYS TNSYRQMPPN SNFPKISVFA LNAEPNFEKL IPFSSLINDS VVITKDYLLM TTWEIGGISF EAEDDDELDI KNDLLNMLFK SFANEPVSFY FHNCRYSIED KLTSKFNNAF LEEIDRKYYE SFKQGTLRKN SLYLTLIFNP LKVKIEKTTF MKSSFENKRK TISVFLAKFS EFADRLEANI KDFNPKRLKT YSKDDKTYSK QLEFYNYLLG GKFNPIRVLP SPIDQYLNGN LQNIQFGHDT IQFNQNDSTK RFARCIEIKD YTNETFAGIL DILMYLDVEY TITQSFSPIP RVDAKSAISK QKKQLIATED DGFSQVEQID EALDQLTNGE ISFGKYHFSI LVYGNTIKEC KDNTNEVVTK MNELGFGVTL ATIALPATFF SQLPSNFAIR PRINLISSIN FSSLIALHNF SMGKRDKNCW GDAVTILKTP NKQPYYFNFH QSSGVNKNDF GKFFLANTLI LGQSSGGKTV FMNFIVDQMM KYASKDTFPD DIPEDKRKFT AIYLDKDKGA LGNILCAGGR YISIENGKPT GFNPFMVEST QENIRQLQSL MKLLVTRNNE ILTTREEEML NNAVNSLMKG FEKEERKYPI SLLLENLTEN VDDDNSLKSR LALFKKGKQF GWVFDNEYDS LDFPDDINLF GIDGTEFLDD KDVSGILSYY ILWRVMSLAD GRRLCIDIDE AWKWLENEIV QEEVKNKFKT IRKQNGFLRL ATQSLEDFLK LKNAATLIEQ SSTMVFLSNP KAKEEEYVKG VGLSYDEYMI IKGFNPVKRQ FLIKRQDEKV ICTLDLSPLG NENLKILSTE TAYIDVIEKI FSQENKSLDE KVLELKEFYK NS // ID Q6AIG9_DESPS Unreviewed; 904 AA. AC Q6AIG9; DT 13-SEP-2004, integrated into UniProtKB/TrEMBL. DT 13-SEP-2004, sequence version 1. DT 14-MAY-2014, entry version 73. DE SubName: Full=Probable conjugal transfer protein TrbE; GN OrderedLocusNames=DPPB14; OS Desulfotalea psychrophila (strain LSv54 / DSM 12343). OG Plasmid large. OC Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; OC Desulfobulbaceae; Desulfotalea. OX NCBI_TaxID=177439; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=LSv54 / DSM 12343; RX PubMed=15305914; DOI=10.1111/j.1462-2920.2004.00665.x; RA Rabus R., Ruepp A., Frickey T., Rattei T., Fartmann B., Stark M., RA Bauer M., Zibat A., Lombardot T., Becker I., Amann J., Gellner K., RA Teeling H., Leuschner W.D., Gloeckner F.-O., Lupas A.N., Amann R., RA Klenk H.-P.; RT "The genome of Desulfotalea psychrophila, a sulfate-reducing bacterium RT from permanently cold Arctic sediments."; RL Environ. Microbiol. 6:887-902(2004). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CR522871; CAG37878.1; -; Genomic_DNA. DR RefSeq; YP_066868.1; NC_006139.1. DR ProteinModelPortal; Q6AIG9; -. DR STRING; 177439.DPPB14; -. DR EnsemblBacteria; CAG37878; CAG37878; DPPB14. DR GeneID; 2945377; -. DR KEGG; dps:DPPB14; -. DR PATRIC; 21716445; VBIDesPsy67261_3392. DR HOGENOM; HOG000289436; -. DR KO; K03199; -. DR OMA; WAEEWIE; -. DR OrthoDB; EOG62NX0G; -. DR BioCyc; DPSY177439:GJW5-3219-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR003593; AAA+_ATPase. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SMART; SM00382; AAA; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 904 AA; 101608 MW; 8B9E02B0C894B937 CRC64; MRCDIPIRQS LHRADLTLGA ESDLVFFTAL LSFLVAFSGP TKLSVASGIF FWMSMIVLLR FIAKKDPIMS KIWRKHINQQ NFYPAKTCLT DKARAMSYKD HTTVKNKSFA NLLQYCACVD DGIILNKDGS FLAGWEYQSI DTASSTNNEL ASLTAFFNNG VKTLGDGWTI HVDAVRIKAD FYPPRSASHF PDLVTEAIEE ERREIFESGI HYETKHVIFV TYKPNLTTEK LSSFAYKKQL QEKGNKAGRE SLKALSFFQN ALNEIEDVLS TAVRLTRLLD YTTEDETGTE HIYSKLLSHI QFSVTGVEQP IKLPTVPMYL DTTIGSQDLV GGLVPKIGEN HLAVIGIDGF PQDSYPMIFN VLDSLSISYR FNSRFICMDQ YTAQTTLNKY RATWAQKIIN PLDKIFNKAN PKVNRDASVM ASDTEEALHD EQAGFVSHGF YSANIIISNE NQEQLEDACR EIRRSLQGIG FGCRRETINC LEAWLGSHPG NSYSNIRQVL INTLNLSHLL PLSSIWTGHT YNPSPFFPVN SPPLLYAATN GSTPFRLNLH VGDLGHTLIF GPTGSGKSTL LSTLCAQFRR YANSNIFIFD KGMSMYPLVS AAEGTHYNIG ADDSTLAFCP LQHVSTPASE AWACEYIEQL VTMQGVTVKP NHRIAIHDAI QQISSSPENM RSLSNLFHYI QEPELKEALV HYTNNGPMGR LLDAESDNIS MSNFTVFEME ELMNMGEENL IPVLLYLFHL IEKSFKGQPS ILVLDEAWIM FSHPVFRKKI REWLKVLRKA NCAVIMATQS LSDAKSSGIM DVLNESCQTK IYLPNITATN ETEAAMYYGL GLNTRQIEII ATARPKREYY IVSPEGRRLI NLSLGPVALS FAGASSKEDI KEIKELEKEH GHVWPKAWLK KRNI // ID Q6D6R0_PECAS Unreviewed; 915 AA. AC Q6D6R0; DT 16-AUG-2004, integrated into UniProtKB/TrEMBL. DT 16-AUG-2004, sequence version 1. DT 14-MAY-2014, entry version 46. DE SubName: Full=Putative conjugal transfer protein; GN Name=virB4; OrderedLocusNames=ECA1620; OS Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) (Erwinia OS carotovora subsp. atroseptica). OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Pectobacterium. OX NCBI_TaxID=218491; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=SCRI 1043 / ATCC BAA-672; RX PubMed=15263089; DOI=10.1073/pnas.0402424101; RA Bell K.S., Sebaihia M., Pritchard L., Holden M.T.G., Hyman L.J., RA Holeva M.C., Thomson N.R., Bentley S.D., Churcher L.J.C., Mungall K., RA Atkin R., Bason N., Brooks K., Chillingworth T., Clark K., Doggett J., RA Fraser A., Hance Z., Hauser H., Jagels K., Moule S., Norbertczak H., RA Ormond D., Price C., Quail M.A., Sanders M., Walker D., Whitehead S., RA Salmond G.P.C., Birch P.R.J., Parkhill J., Toth I.K.; RT "Genome sequence of the enterobacterial phytopathogen Erwinia RT carotovora subsp. atroseptica and characterization of virulence RT factors."; RL Proc. Natl. Acad. Sci. U.S.A. 101:11105-11110(2004). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; BX950851; CAG74525.1; -; Genomic_DNA. DR RefSeq; YP_049721.1; NC_004547.2. DR ProteinModelPortal; Q6D6R0; -. DR STRING; 218491.ECA1620; -. DR EnsemblBacteria; CAG74525; CAG74525; ECA1620. DR GeneID; 2882698; -. DR KEGG; eca:ECA1620; -. DR PATRIC; 20478536; VBIPecAtr54885_1659. DR HOGENOM; HOG000119263; -. DR KO; K03199; -. DR OMA; FIAMRAM; -. DR OrthoDB; EOG6HMX9P; -. DR BioCyc; PATR218491:GJNB-1656-MONOMER; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 915 AA; 103517 MW; B150B7E146737520 CRC64; MATLNKALTR PAAIAGIPIV PFVIVSGAIV LLSVYLSYYL VLLLIPAWLE MKAKARTDIH YFGLLWLAFK TRGRFATNKY FGANAMLANR YDAVDVSEFI EKMKLNERVT LDKHIPYSSH VHPQVIRNRH GDLVSTWELG GTVFECEDEH HLTLMATHLN NVIRSYEGLP ITFYLHRIRE KYQDAFAASS GIPFSDDVTA LYYQPIKEKP LWRHRLFFTL CYAPFSRLEK KAMKAQPSGK RTAALDGALK VMLEHRAALA SALSRYTATP LGVYEENGRV YSSQLSFYHR LLTGQWQKVA VTRSPFYDIL STPDVFFTTD TAECQTVSGS RFFRSLEIKD YSPDTATGLL DALLYAESEY VMTQSFTCMA RDEAQNHIRL AEKRLNSAAD DAISQREELI VLRDLLQSGH VSCGKYHFSL LVSSDSADQV VKDVNALAQP FADLGIMTTL STLSLPAAYL AQLPGVYTLR PRLVAVSSQN FADMASLHNF HPHKRNGNPW GEAITIMTSP GGGGYYLNLH DSQAGRDDFN EKTPGNTAII GKTGSGKTML MTVMQQLMQK YRNPATFSES APHKRLSTVY FDKDRAAEMA IRQMGGRYFR LRTGVPTGFN PFALAPTKRN ISFIKRLVRM LCRRNSKPLD PRDEERISTA VDTIMLDYPP EYRRYGITRL LEVLPEPPTK EARTNGLRIR LKQWAQGGEF GWVFDNETDT FDISDIDNVG IDGTEFLDDD DIRGPITFYL LYRVTGLLDG RRLVMFMDEF WKWLADVEFS RFSLNMLKVI RKLNGIFIPA TQSPDEIVRH PIAPAIIEQC GTQIFLANPK ASRADYVEKM KVPDSVYDIV RHLDPGERYM VVLKTPLRAG ETRPFVSMAK MDLSGLGKIT RMLSGSEDNL KLFDALYQEG MQPDDWKDAF LEIAL // ID Q6FYJ1_BARQU Unreviewed; 102 AA. AC Q6FYJ1; Q4L2S3; DT 19-JUL-2004, integrated into UniProtKB/TrEMBL. DT 19-JUL-2004, sequence version 1. DT 14-MAY-2014, entry version 40. DE SubName: Full=TrwL-like protein; DE SubName: Full=TrwM protein; GN Name=trwM; Synonyms=trwL; OrderedLocusNames=BQ12570; OS Bartonella quintana (strain Toulouse) (Rochalimaea quintana). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=283165; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Toulouse; RA Alsmark U.C.M., Frank A.C., Thollesson M., Andersson S.G.E.; RT "Evolution of Type IV Secretion Systems in Bartonella: Horizontal RT Transmission and Gene Conversion."; RL Submitted (JUN-2002) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Toulouse; RX PubMed=15210978; DOI=10.1073/pnas.0305659101; RA Alsmark U.C.M., Frank A.C., Karlberg E.O., Legault B.-A., Ardell D.H., RA Canbaeck B., Eriksson A.-S., Naeslund A.K., Handley S.A., Huvet M., RA La Scola B., Holmberg M., Andersson S.G.E.; RT "The louse-borne human pathogen Bartonella quintana is a genomic RT derivative of the zoonotic agent Bartonella henselae."; RL Proc. Natl. Acad. Sci. U.S.A. 101:9716-9721(2004). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AY122054; AAM82223.1; -; Genomic_DNA. DR EMBL; BX897700; CAF26716.1; -; Genomic_DNA. DR RefSeq; YP_032784.1; NC_005955.1. DR STRING; 283165.BQ12570; -. DR EnsemblBacteria; CAF26716; CAF26716; BQ12570. DR GeneID; 2866814; -. DR KEGG; bqu:BQ12570; -. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; FWGASSY; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BQUI283165:GHZA-1255-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 102 AA; 12036 MW; 46A94D544F03076C CRC64; MKSQKHEAFP LFKGATRVPT IWGVPMMPLI VMVMGVAVMS MTINIFLWLI APPLWFVMAQ ITKNDDKAFH IWWLWIDTKF RNRNKSFWGA SSYSPSNYQK RR // ID Q6G1T6_BARHE Unreviewed; 102 AA. AC Q6G1T6; Q4L2U9; DT 19-JUL-2004, integrated into UniProtKB/TrEMBL. DT 19-JUL-2004, sequence version 1. DT 14-MAY-2014, entry version 40. DE SubName: Full=TrwL-like protein; DE SubName: Full=TrwM protein; GN Name=trwM; Synonyms=trwL; OrderedLocusNames=BH15650; OS Bartonella henselae (strain ATCC 49882 / Houston 1) (Rochalimaea OS henselae). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=283166; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Houston-1; RA Alsmark U.C.M., Frank A.C., Thollesson M., Andersson S.G.E.; RT "Evolution of Type IV Secretion Systems in Bartonella: Horizontal RT Transmission and Gene Conversion."; RL Submitted (JUN-2002) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 49882 / Houston 1; RX PubMed=15210978; DOI=10.1073/pnas.0305659101; RA Alsmark U.C.M., Frank A.C., Karlberg E.O., Legault B.-A., Ardell D.H., RA Canbaeck B., Eriksson A.-S., Naeslund A.K., Handley S.A., Huvet M., RA La Scola B., Holmberg M., Andersson S.G.E.; RT "The louse-borne human pathogen Bartonella quintana is a genomic RT derivative of the zoonotic agent Bartonella henselae."; RL Proc. Natl. Acad. Sci. U.S.A. 101:9716-9721(2004). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AY122053; AAM82201.1; -; Genomic_DNA. DR EMBL; BX897699; CAF28328.1; -; Genomic_DNA. DR RefSeq; YP_034261.1; NC_005956.1. DR STRING; 283166.BH15650; -. DR EnsemblBacteria; CAF28328; CAF28328; BH15650. DR GeneID; 2864834; -. DR KEGG; bhe:BH15650; -. DR PATRIC; 20547422; VBIBarHen29080_1819. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; FWGASSY; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BHEN283166:GIVZ-1560-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 102 AA; 12075 MW; 9F77CC0F7D17D23A CRC64; MKPQKHEAFP LFKGATRVPT IWGVPMMPLI VMAMSVAVIA MTINIFLWLI APPLWFIMAQ ITKNDDKAFR IWWLWIDTKF RNRNKSFWGA SSYSPSNYRK RR // ID Q6LB35_OLICO Unreviewed; 99 AA. AC Q6LB35; DT 05-JUL-2004, integrated into UniProtKB/TrEMBL. DT 05-JUL-2004, sequence version 1. DT 14-MAY-2014, entry version 40. DE SubName: Full=Conjugal transfer protein TrbD; GN Name=trbD; OrderedLocusNames=OCA5_pHCG301250; OS Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5). OG Plasmid pHCG3. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Oligotropha. OX NCBI_TaxID=504832; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 49405 / DSM 1227 / OM5; PLASMID=pHCG3; RX PubMed=14644498; DOI=10.1016/j.gene.2003.08.027; RA Fuhrmann S., Ferner M., Jeffke T., Henne A., Gottschalk G., Meyer O.; RT "Complete nucleotide sequence of the circular megaplasmid pHCG3 of RT Oligotropha carboxidovorans: function in the chemolithoautotrophic RT utilization of CO, H(2) and CO(2)."; RL Gene 322:67-75(2003). RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 49405 / DSM 1227 / OM5; PLASMID=pHCG3; RX PubMed=21742883; DOI=10.1128/JB.05619-11; RA Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., RA Meyer O.; RT "Complete genome sequences of the chemolithoautotrophic Oligotropha RT carboxidovorans strains OM4 and OM5."; RL J. Bacteriol. 193:5043-5043(2011). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CP002827; AEI08196.1; -; Genomic_DNA. DR RefSeq; YP_004638523.1; NC_015689.1. DR EnsemblBacteria; AEI08196; AEI08196; OCA5_pHCG301250. DR GeneID; 10852875; -. DR KEGG; ocg:OCA5_pHCG301250; -. DR KO; K03198; -. DR OMA; LRMMAKS; -. DR BioCyc; OCAR504832:GJPZ-3691-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 99 AA; 11357 MW; 4277CA037D485D4F CRC64; MAEGLSGLHR SRIHRALSRP NLLLGADREL VLVTGLAAVI LIFVVLTWFS ALLGLAIWSG IVGLLRMMAK ADPMMRQVYL RHIRYRPRYR PTSTPWRKY // ID Q6LGX1_PHOPR Unreviewed; 97 AA. AC Q6LGX1; DT 05-JUL-2004, integrated into UniProtKB/TrEMBL. DT 05-JUL-2004, sequence version 1. DT 14-MAY-2014, entry version 39. DE SubName: Full=Hypothetical TrbD protein; GN Name=AGR_PTI_; OrderedLocusNames=PBPRB1599; OS Photobacterium profundum (Photobacterium sp. (strain SS9)). OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; OC Vibrionaceae; Photobacterium. OX NCBI_TaxID=74109; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=SS9; RX PubMed=15746425; DOI=10.1126/science.1103341; RA Vezzi A., Campanaro S., D'Angelo M., Simonato F., Vitulo N., RA Lauro F.M., Cestaro A., Malacrida G., Simionati B., Cannata N., RA Romualdi C., Bartlett D.H., Valle G.; RT "Life at depth: Photobacterium profundum genome sequence and RT expression analysis."; RL Science 307:1459-1461(2005). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CR378680; CAG23459.1; -; Genomic_DNA. DR RefSeq; YP_133259.1; NC_006371.1. DR STRING; 298386.PBPRB1599; -. DR EnsemblBacteria; CAG23459; CAG23459; PBPRB1599. DR GeneID; 3121119; -. DR KEGG; ppr:PBPRB1599; -. DR PATRIC; 22941890; VBIPhoPro109272_5500. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; AKSDPYM; -. DR OrthoDB; EOG6N6849; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 97 AA; 11065 MW; 539B0B5B346D6F36 CRC64; MNTDEPLVCR PVFAFNRSHL FLGGERELVL SMVLLCIVLI VALQNIYTAM MGVVLLIVSI TVARMMAKSD PQLTKTYRRF ARYQRFYPSN GMKQYGG // ID Q6N2C8_RHOPA Unreviewed; 87 AA. AC Q6N2C8; DT 05-JUL-2004, integrated into UniProtKB/TrEMBL. DT 05-JUL-2004, sequence version 1. DT 14-MAY-2014, entry version 39. DE SubName: Full=Conjugal transfer protein TrbD; GN OrderedLocusNames=RPA4122; OS Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Rhodopseudomonas. OX NCBI_TaxID=258594; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-98 / CGA009; RX PubMed=14704707; DOI=10.1038/nbt923; RA Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L., RA Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R., RA Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C., RA Harrison F.H., Gibson J., Harwood C.S.; RT "Complete genome sequence of the metabolically versatile RT photosynthetic bacterium Rhodopseudomonas palustris."; RL Nat. Biotechnol. 22:55-61(2004). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; BX572606; CAE29563.1; -; Genomic_DNA. DR RefSeq; NP_949458.1; NC_005296.1. DR STRING; 258594.RPA4122; -. DR EnsemblBacteria; CAE29563; CAE29563; RPA4122. DR GeneID; 2692897; -. DR KEGG; rpa:RPA4122; -. DR PATRIC; 23292823; VBIRhoPal84835_4326. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; WAIGHIA; -. DR OrthoDB; EOG64BQ98; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 87 AA; 9181 MW; D484B013CE9E2801 CRC64; MEEMIPGFAA PVHRALTEHI LLGGAPRAVA ILNGTLAAAL GLGLRLWLAG LVLAILGHAA AVWAAKRDPL FVDVVRRHLR IPGHLSV // ID Q6N7M6_RHOPA Unreviewed; 90 AA. AC Q6N7M6; DT 05-JUL-2004, integrated into UniProtKB/TrEMBL. DT 05-JUL-2004, sequence version 1. DT 14-MAY-2014, entry version 39. DE SubName: Full=Conjugal transfer protein trbD; GN Name=trbD; OrderedLocusNames=RPA2231; OS Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Rhodopseudomonas. OX NCBI_TaxID=258594; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC BAA-98 / CGA009; RX PubMed=14704707; DOI=10.1038/nbt923; RA Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L., RA Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R., RA Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C., RA Harrison F.H., Gibson J., Harwood C.S.; RT "Complete genome sequence of the metabolically versatile RT photosynthetic bacterium Rhodopseudomonas palustris."; RL Nat. Biotechnol. 22:55-61(2004). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; BX572600; CAE27672.1; -; Genomic_DNA. DR RefSeq; NP_947576.1; NC_005296.1. DR STRING; 258594.RPA2231; -. DR EnsemblBacteria; CAE27672; CAE27672; RPA2231. DR GeneID; 2692651; -. DR KEGG; rpa:RPA2231; -. DR PATRIC; 23288819; VBIRhoPal84835_2345. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; ALTEHIM; -. DR OrthoDB; EOG64BQ98; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 90 AA; 9682 MW; 3D6BD4D169B5CD32 CRC64; MLGADEPAVG FYAPVRRSLT EPILLGGAPR SLAIINGTLA AALGLGLRLW LAGLLIWLVG HMAAVWAARR DPAFVDVVRR HLRYPTHFGA // ID Q6QHM1_ACHDE Unreviewed; 103 AA. AC Q6QHM1; DT 05-JUL-2004, integrated into UniProtKB/TrEMBL. DT 05-JUL-2004, sequence version 1. DT 14-MAY-2014, entry version 23. DE SubName: Full=TrbD; GN Name=trbD; OS Achromobacter denitrificans (Alcaligenes denitrificans). OG Plasmid pEST4011. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Alcaligenaceae; Achromobacter. OX NCBI_TaxID=32002; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=EST4002; PLASMID=pEST4011; RX PubMed=15489427; DOI=10.1128/JB.186.21.7161-7174.2004; RA Vedler E., Vahter M., Heinaru A.; RT "The completely sequenced plasmid pEST4011 contains a novel IncP1 RT backbone and a catabolic transposon harboring tfd genes for 2,4- RT dichlorophenoxyacetic acid degradation."; RL J. Bacteriol. 186:7161-7174(2004). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=EST4002; PLASMID=pEST4011; RA Vedler E.; RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AY540995; AAS49462.1; -; Genomic_DNA. DR RefSeq; NP_990921.1; NC_005793.2. DR GeneID; 2761017; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11889 MW; 5FE2187E39A54050 CRC64; MALRTIPIRR AGNRDNLFMG GDRELVMFSG LLAFALIFSA QELRATVIGL LLWFGALFAC RLMAKSDPKL RFVYLRHRKY KGYYPARSTP FRLNPNSQGK QYK // ID Q6UP61_CUPPJ Unreviewed; 103 AA. AC Q6UP61; Q46M28; DT 05-JUL-2004, integrated into UniProtKB/TrEMBL. DT 05-JUL-2004, sequence version 1. DT 14-MAY-2014, entry version 55. DE SubName: Full=Conjugal transfer TrbD; DE SubName: Full=Mating pair formation; GN Name=trbD; OrderedLocusNames=Reut_D6504; OS Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia OS eutropha (strain JMP 134)). OG Plasmid 1, Plasmid pJP4, and Plasmid pReut1. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Cupriavidus. OX NCBI_TaxID=264198; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=JMP134; PLASMID=pJP4; RX PubMed=15186344; DOI=10.1111/j.1462-2920.2004.00596.x; RA Trefault N., De la Iglesia R., Molina A.M., Manzano M., Ledger T., RA Perez-Pantoja D., Sanchez M.A., Stuardo M., Gonzalez B.; RT "Genetic organization of the catabolic plasmid pJP4 from Ralstonia RT eutropha JMP134 (pJP4) reveals mechanisms of adaptation to RT chloroaromatic pollutants and evolution of specialized chloroaromatic RT degradation pathways."; RL Environ. Microbiol. 6:655-668(2004). RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=JMP134 / LMG 1197; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., RA Hammon N., Israni S., Pitluck S., Goltsman E., Martinez M., RA Schmutz J., Larimer F., Land M., Lykidis A., Richardson P.; RT "Complete sequence of plasmid 1 of Ralstonia eutropha JMP134."; RL Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases. RN [3] RP NUCLEOTIDE SEQUENCE. RC STRAIN=JMP134; PLASMID=1; RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., RA Hammon N., Israni S., Pitluck S., Goltsman E., Martinez M., RA Schmutz J., Larimer F., Land M., Lykidis A., Richardson P.; RT "Complete sequence of Plasmid1 of Ralstonia eutropha JMP134."; RL Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AY365053; AAR31076.1; -; Genomic_DNA. DR EMBL; CP000093; AAZ65802.1; -; Genomic_DNA. DR RefSeq; YP_293659.1; NC_007337.1. DR STRING; 264198.Reut_D6504; -. DR EnsemblBacteria; AAZ65802; AAZ65802; Reut_D6504. DR GeneID; 3607936; -. DR KEGG; reu:Reut_D6504; -. DR PATRIC; 20225388; VBIRalEut24049_0573. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; LRMMAKS; -. DR OrthoDB; EOG6N6849; -. DR BioCyc; CPIN264198:GIW3-6590-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 103 AA; 11802 MW; 8F4CEDEE6B161847 CRC64; MALRAIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QEVRATVFGI ALWFGALFAL RLMAKADPKL RHVYLRHRRY KPYYPARSTP FRDNTPSQGK QYK // ID Q6XGG0_ECOLX Unreviewed; 912 AA. AC Q6XGG0; DT 05-JUL-2004, integrated into UniProtKB/TrEMBL. DT 05-JUL-2004, sequence version 1. DT 16-APR-2014, entry version 22. DE SubName: Full=Pilx3-4/VirB3-4-like protein; OS Escherichia coli. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=562; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ECOR31; RX PubMed=14731283; DOI=10.1046/j.1365-2958.2003.03870.x; RA Schubert S., Dufke S., Sorsa J., Heesemann J.; RT "A novel integrative and conjugative element (ICE) of Escherichia RT coli: the putative progenitor of the Yersinia high-pathogenicity RT island."; RL Mol. Microbiol. 51:837-848(2004). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AY233333; AAP70302.1; -; Genomic_DNA. DR ProteinModelPortal; Q6XGG0; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; SQ SEQUENCE 912 AA; 103084 MW; 095C183866793052 CRC64; MAKLLKAMKR PAALWGVPMV PLLAVTGVTI IVAIWTSVAL LFLLPVQFLV MKSLTRNEPM RFNLIAVWLR AKGKPVANRL FGATTFMPVE HDDVDIKEFL DAMKLNQCAT IKKYIPYSSH IHQHVVRSPK SDLYCTWELM GTPFDCESDE SLQFGTNQLH GLIRSFEGMP VTFYIHNDRN TFTDNLHKDS GNPYADEVSR LYYASVGLFR RNRLFLTVCY RPFVSLEKAE RKRMKDSQKL KELDGALLEM LEIKSTLDTA LSRYGARPLG TFTEGNAVFS SQLAFYEYLL THQWRKVRVT RTPAYDVMGA AALFFSAESG QINHANGTQY FRGLEVKEFS EETATGMMDS LLYAPCDYVI TQSYTCMSRE EAKKAIKRTR RLLMSADDDA VSQRLDLDVA LDLLTSGKIA YGKHHFSIMV YSPSLESLVA DTNEISNALN NIGITPVPAE ISLSAAYMAQ LPGNYNLRPR KGELSSQNFV ELAALHNFYP GKRDKAPWGD AMALLRTPSG DGYYINLHNT LADKDEFNEK NPASTCILGT NGSGKTMLMT FFEIMQQKYG REDSFSPDAK TKRLTTVYLD KDRGAEMNIR ALGGRYYRVI SGESTGWNPF SLPATKRNIN FIKQLMKILC TRNGSTISPR DERRLSDAVN AVMNDEPQYR VYGITRMLEN LPEPATKEAQ ENGLSIRLSQ WAQGGEFGWV FDNESDTFDI SNCDNFGIDG TEFLDDASVC APISFYLLYR ITSLLDGRRL VIFMDEFWKW LRDPVFKDFA YNKLKTIRKL NGMLVVGTQS PAEIIKDDIA PAVIEQCGTQ ILAANPNADR AHYVDGMKFE PEVFDVVKGL DPQARQYVVV KNQFKRGDTK RFAARVTLDL SGIGRYTKVM SGDAPNLEIF ESIYREGMQP HEWLDTYLAK AL // ID Q70W68_YEREN Unreviewed; 915 AA. AC Q70W68; DT 05-JUL-2004, integrated into UniProtKB/TrEMBL. DT 05-JUL-2004, sequence version 1. DT 16-APR-2014, entry version 24. DE SubName: Full=TriC protein; GN Name=triC; OS Yersinia enterocolitica. OG Plasmid p29930. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Yersinia. OX NCBI_TaxID=630; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=p29930; RA Strauch E., Goelz G., Knabner D., Konietzny A., Lanka E., Appel B.; RT "A cryptic plasmid of Yersinia enterocolitica encodes a conjugative RT transfer system related to the regions of CloDF13 Mob and IncX Pil."; RL Microbiology 1149:2829-2845(2003). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AJ519722; CAD58564.1; -; Genomic_DNA. DR ProteinModelPortal; Q70W68; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW. DR Gene3D; 3.40.50.300; -; 3. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. PE 4: Predicted; KW Endonuclease; Hydrolase; Nuclease; Plasmid. SQ SEQUENCE 915 AA; 103260 MW; 87FE1A6B93703F9A CRC64; MVTLNKALTR PAMLFGIPMV PLVIVSGAII LLAIYLTKLL LLFLPVSWFV MNQMARKDAH IFGLAFLKLK TRGNKTCNTH YGATAFLAND YDAVDITEFI NTMRLNERVT LTKHIPYSSH IHENVIKTRG SDLIATWEIG GTAFECDTEE NLDILSGQFN NLIKSFEGRP VTFYVHNIRE TYHDHFDGHS GNDFADTVSE RYYSTIENHP FRHNRLFFTA CYMPFVGLDK VERKRMSDGQ KQHALDSALK EMLEICQTVG TSLSRFTANQ LGAYEENGRV FSSQLSFYRR LLSGVWQKTA VTRTPFYETL GTTDLFFTGD AGQSNNVNGK TFFRGLEVKD YAPESFTGIM NVLLYAPCDY VITQSFTCMA KDEAQKHIKQ TAKRLRSTED DAISQQEDLF VALDMLQAGH IAFGKYHFSL MVSAPGTERL IKDTNSLINA FTDLGITPTL STLSLPAAYL AQMPGVYTLR PRLVPISSQN FAELASFHNF YTGKRDKNPW GEALCVLKTP SGGAYYMNLH NSMLNKDDFN EKNLGNTSVI GTAGSGKTML MAFIQVMMQK YRQPRSFSPQ AKTQRLTTVY FDKDRGAELN VRALGGQYYK VKSGEPTGWN PFRLPPTKRN LNFIKKLMRI LCTRNGQTLF PRDELRLSQA VDAVMKELPA EHRGFGITRL LENLTEPPTK EAQENGLRVR LSQWAQGGEY GWVFDNDLDT FDIGECDNFG IDGTEFLDDA DVCAPISFYL LYRVTSLLDG RRLVIFMDEF WKWLNDPVFS DFAFNVLKVI RKLNGVFIPG TQSPAEILIN PISPAVVEQC GTQIFTANPK ADRKDYVDGL KVAPEIFDII KNLDPLSRQF VIVKSPLKKG DLRNFAALVT LDLSGLGTYT KVLSSSADNL EIFDSVFQDG MKPDDWLERY LQLAL // ID Q73GS3_WOLPM Unreviewed; 98 AA. AC Q73GS3; DT 05-JUL-2004, integrated into UniProtKB/TrEMBL. DT 05-JUL-2004, sequence version 1. DT 14-MAY-2014, entry version 46. DE SubName: Full=Type IV secretion system protein VirB3, putative; GN OrderedLocusNames=WD_0859; OS Wolbachia pipientis wMel. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Wolbachieae; Wolbachia. OX NCBI_TaxID=163164; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=WMel; RX PubMed=15024419; DOI=10.1371/journal.pbio.0020069; RA Wu M., Sun L.V., Vamathevan J., Riegler M., Deboy R., Brownlie J.C., RA McGraw E.A., Martin W., Esser C., Ahmadinejad N., Wiegand C., RA Madupu R., Beanan M.J., Brinkac L.M., Daugherty S.C., Durkin A.S., RA Kolonay J.F., Nelson W.C., Mohamoud Y., Lee P., Berry K., Young M.B., RA Utterback T., Weidman J., Nierman W.C., Paulsen I.T., Nelson K.E., RA Tettelin H., O'Neill S.L., Eisen J.A.; RT "Phylogenomics of the reproductive parasite Wolbachia pipientis wMel: RT a streamlined genome overrun by mobile genetic elements."; RL PLoS Biol. 2:327-341(2004). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AE017196; AAS14543.1; -; Genomic_DNA. DR RefSeq; NP_966609.1; NC_002978.6. DR STRING; 163164.WD0859; -. DR EnsemblBacteria; AAS14543; AAS14543; WD_0859. DR GeneID; 2738594; -. DR KEGG; wol:WD0859; -. DR PATRIC; 24030298; VBIWolEnd21207_0848. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; WEND163164:GJ8W-844-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 98 AA; 10932 MW; A24ABE67EA3869C8 CRC64; MSTGSIQTDQ LFKGLTRPPM LFGVSYIFAI LNVLICMLIF INSNDLRVIL LMLPGIHGLG YIASAKEPLF IELFMVKLGK CSKCLNRFYH GANSYDIA // ID Q76M38_DELAC Unreviewed; 103 AA. AC Q76M38; DT 05-JUL-2004, integrated into UniProtKB/TrEMBL. DT 05-JUL-2004, sequence version 1. DT 14-MAY-2014, entry version 27. DE SubName: Full=TrbD; GN Name=trbD; OS Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans). OG Plasmid pUO1. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Delftia. OX NCBI_TaxID=80866; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=B; PLASMID=pUO1; RX PubMed=11976102; DOI=10.1128/AEM.68.5.2307-2315.2002; RA Sota M., Endo M., Nitta K., Kawasaki H., Tsuda M.; RT "Characterization of a class II defective transposon carrying two RT haloacetate dehalogenase genes from Delftia acidovorans plasmid RT pUO1."; RL Appl. Environ. Microbiol. 68:2307-2315(2002). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=B; PLASMID=pUO1; RX PubMed=14594853; DOI=10.1128/JB.185.22.6741-6745.2003; RA Sota M., Kawasaki H., Tsuda M.; RT "Structure of haloacetate-catabolic IncP-1beta plasmid pUO1 and RT genetic mobility of its residing haloacetate-catabolic transposon."; RL J. Bacteriol. 185:6741-6745(2003). RN [3] RP NUCLEOTIDE SEQUENCE. RC STRAIN=B; PLASMID=pUO1; RX PubMed=16391056; DOI=10.1128/AEM.72.1.291-297.2006; RA Sota M., Yano H., Nagata Y., Ohtsubo Y., Genka H., Anbutsu H., RA Kawasaki H., Tsuda M.; RT "Functional analysis of unique class II insertion sequence IS1071."; RL Appl. Environ. Microbiol. 72:291-297(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AB063332; BAC81987.1; -; Genomic_DNA. DR RefSeq; NP_904264.1; NC_005088.1. DR GeneID; 2546664; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11802 MW; 8F4CEDEE6B161847 CRC64; MALRAIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QEVRATVFGI ALWFGALFAL RLMAKADPKL RHVYLRHRRY KPYYPARSTP FRDNTPSQGK QYK // ID Q79BP8_PSESD Unreviewed; 103 AA. AC Q79BP8; DT 05-JUL-2004, integrated into UniProtKB/TrEMBL. DT 05-JUL-2004, sequence version 1. DT 14-MAY-2014, entry version 18. DE SubName: Full=TrbD protein; GN Name=trbD; OS Pseudomonas sp. (strain ADP). OG Plasmid pADP-1. OC Bacteria; Proteobacteria. OX NCBI_TaxID=47660; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=ADP; PLASMID=pADP-1; RA Martinez B.M., Tomkins J., Wackett L.P., Wing R., Sadowsky M.J.; RL Submitted (JAN-2001) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; U66917; AAK50317.1; -; Genomic_DNA. DR RefSeq; NP_862523.1; NC_004956.1. DR GeneID; 1440620; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11802 MW; 8F4CEDEE6B161847 CRC64; MALRAIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QEVRATVFGI ALWFGALFAL RLMAKADPKL RHVYLRHRRY KPYYPARSTP FRDNTPSQGK QYK // ID Q79DP0_9ZZZZ Unreviewed; 103 AA. AC Q79DP0; DT 05-JUL-2004, integrated into UniProtKB/TrEMBL. DT 05-JUL-2004, sequence version 1. DT 13-NOV-2013, entry version 16. DE SubName: Full=TrbD protein; GN Name=trbD; OS Plasmid RP4. OG Plasmid RP4. OC other sequences; plasmids. OX NCBI_TaxID=2503; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=RP4; RX PubMed=1400366; RA Lessl M., Balzer D., Pansegrau W., Lanka E.; RT "Sequence similarities between the RP4 Tra2 and the Ti VirB region RT strongly support the conjugation model for T-DNA transfer."; RL J. Biol. Chem. 267:20471-20480(1992). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; M93696; AAA26430.1; -; Genomic_DNA. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 12085 MW; C1D63A178E30DEF7 CRC64; MALRTIPIRR AGNRENLFMG GDRELVMFSG LMAFALIFSA QELRATVVGL ILWFGALYAF RIMAKADPKM RFVYLRHRRY KPYYPARSTP FRENTNSQGK QYR // ID Q79SF0_SALTM Unreviewed; 103 AA. AC Q79SF0; DT 05-JUL-2004, integrated into UniProtKB/TrEMBL. DT 05-JUL-2004, sequence version 1. DT 14-MAY-2014, entry version 27. DE SubName: Full=TraA; GN Name=traA; OS Salmonella typhimurium. OG Plasmid R46. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella. OX NCBI_TaxID=90371; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=R46; RX PubMed=7891554; DOI=10.1111/j.1365-2958.1994.tb01304.x; RA Pohlman R.F., Genetti H.D., Winans S.C.; RT "Common ancestry between IncN conjugal transfer genes and RT macromolecular export systems of plant and animal pathogens."; RL Mol. Microbiol. 14:655-668(1994). RN [2] RP NUCLEOTIDE SEQUENCE. RC PLASMID=R46; RX PubMed=8029323; DOI=10.1006/plas.1994.1017; RA Pohlman R.F., Genetti H.D., Winans S.C.; RT "Entry exclusion of the IncN plasmid pKM101 is mediated by a single RT hydrophilic protein containing a lipid attachment motif."; RL Plasmid 31:158-165(1994). RN [3] RP NUCLEOTIDE SEQUENCE. RC PLASMID=R46; RA Belogurov A.A., Hall R.M., Winans S.C., Woodgate R.; RT "Complete sequence of R46 and its deletion derivative, pKM101."; RL Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AY046276; AAL13385.1; -; Genomic_DNA. DR RefSeq; NP_511189.1; NC_003292.1. DR PRIDE; Q79SF0; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11752 MW; 39143B0981BEFFB6 CRC64; MFVDGKRPLF KGATRLPRAL GVPRNVAMMI FMISASLFMI IHMWAILVFV FLRIPSAALT KYDDRMFRIM GLWLKTNSVI GLILRLSSGE DRLIPLLTTN VRV // ID Q7AXT8_PSEPU Unreviewed; 98 AA. AC Q7AXT8; DT 05-JUL-2004, integrated into UniProtKB/TrEMBL. DT 05-JUL-2004, sequence version 1. DT 14-MAY-2014, entry version 18. DE SubName: Full=Putative mating pair formation protein; GN Name=mpfB; OS Pseudomonas putida (Arthrobacter siderocapsulatus). OG Plasmid pWW0. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. OX NCBI_TaxID=303; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pWW0; RX PubMed=12534468; DOI=10.1046/j.1462-2920.2002.00305.x; RA Greated A., Lambertson L., Williams P.A., Thomas C.M.; RT "Complete sequence of the IncP-9 TOL plasmid pWW0 from Pseudomonas RT putida."; RL Environ. Microbiol. 4:856-871(2002). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AJ344068; CAC86869.1; -; Genomic_DNA. DR RefSeq; NP_542929.1; NC_003350.1. DR GeneID; 1218769; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 98 AA; 10948 MW; B5EE8D4DDBE83D3E CRC64; MAEYDDLEEG EVLVLAMARP SMVGPFTLSS ILISLIAPVL LALLIRSLYP LGLIPVLFVI SYWICSKDVY LFGVLQAASN LKASRLRKLW GYRSYAPR // ID Q7BLQ4_RHIRD Unreviewed; 108 AA. AC Q7BLQ4; DT 10-MAY-2005, integrated into UniProtKB/TrEMBL. DT 10-MAY-2005, sequence version 1. DT 14-MAY-2014, entry version 16. DE SubName: Full=VirB3; GN Name=virB3; OS Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium OS radiobacter). OG Plasmid Ti. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=358; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=Ti; RA Winans S.C., Zhu J., Oger P.M., Schrammeijer B., Hooykaas P.J., RA Farrand S.K.; RT "Octopine-type Ti plasmid sequence."; RL Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AF242881; AAF77163.1; -; Genomic_DNA. DR RefSeq; NP_059801.1; NC_002377.1. DR GeneID; 1224320; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 108 AA; 11760 MW; 3D0CCCB19ECA105D CRC64; MNDRLEEATL YLAATRPALF LGVPLTLAGL FMMFAGFVIV IVQNPLYEVV LAPLWFGARL IVERDYNAAS VVLLFLRTAG RSIDSAVWGG ATVSPNPIRV PPRGRGMV // ID Q7D2P3_AGRT5 Unreviewed; 99 AA. AC Q7D2P3; DT 05-JUL-2004, integrated into UniProtKB/TrEMBL. DT 05-JUL-2004, sequence version 1. DT 14-MAY-2014, entry version 49. DE SubName: Full=Conjugal transfer protein; GN Name=trbD; OrderedLocusNames=Atu6039; OS Agrobacterium tumefaciens (strain C58 / ATCC 33970). OG Plasmid Ti. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=176299; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=C58 / ATCC 33970; RX PubMed=11743194; DOI=10.1126/science.1066803; RA Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., RA Qurollo B., Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., RA Houmiel K., Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., RA Wollam C., Allinger M., Doughty D., Scott C., Lappas C., Markelz B., RA Flanagan C., Crowell C., Gurson J., Lomo C., Sear C., Strub G., RA Cielo C., Slater S.; RT "Genome sequence of the plant pathogen and biotechnology agent RT Agrobacterium tumefaciens C58."; RL Science 294:2323-2328(2001). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AE007871; AAK90997.1; -; Genomic_DNA. DR RefSeq; NP_396556.1; NC_003065.3. DR ProteinModelPortal; Q7D2P3; -. DR STRING; 176299.Atu6039; -. DR EnsemblBacteria; AAK90997; AAK90997; Atu6039. DR GeneID; 1137362; -. DR KEGG; atu:Atu6039; -. DR PATRIC; 20820302; VBIAgrTum91616_5245. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; LRMMAKS; -. DR BioCyc; AGRO:ATU6039-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Plasmid; Reference proteome. SQ SEQUENCE 99 AA; 11265 MW; 63EC6C6E45738DD0 CRC64; MAEPGSNLAR SRVHRALSRP NLLMGADREL VLLTGLAAVI LIFVVLTWYA ALFGVAIWLV AVAALRMMAK SDPLMRRVYL RHVSYRSHYR PTSTPWRKF // ID Q7D3S0_AGRT5 Unreviewed; 113 AA. AC Q7D3S0; DT 05-JUL-2004, integrated into UniProtKB/TrEMBL. DT 05-JUL-2004, sequence version 1. DT 14-MAY-2014, entry version 48. DE SubName: Full=Type IV secretion protein AvhB3; GN Name=avhB3; OrderedLocusNames=Atu5164; OS Agrobacterium tumefaciens (strain C58 / ATCC 33970). OG Plasmid AT. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=176299; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=C58 / ATCC 33970; RX PubMed=11743194; DOI=10.1126/science.1066803; RA Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., RA Qurollo B., Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., RA Houmiel K., Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., RA Wollam C., Allinger M., Doughty D., Scott C., Lappas C., Markelz B., RA Flanagan C., Crowell C., Gurson J., Lomo C., Sear C., Strub G., RA Cielo C., Slater S.; RT "Genome sequence of the plant pathogen and biotechnology agent RT Agrobacterium tumefaciens C58."; RL Science 294:2323-2328(2001). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AE007872; AAK90535.1; -; Genomic_DNA. DR RefSeq; NP_396094.1; NC_003064.2. DR ProteinModelPortal; Q7D3S0; -. DR STRING; 176299.Atu5164; -. DR EnsemblBacteria; AAK90535; AAK90535; Atu5164. DR GeneID; 1136937; -. DR KEGG; atu:Atu5164; -. DR PATRIC; 20819495; VBIAgrTum91616_4842. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; HDHNMFR; -. DR OrthoDB; EOG6VMTNS; -. DR BioCyc; AGRO:ATU5164-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid; Reference proteome. SQ SEQUENCE 113 AA; 12599 MW; 86ADD5207D536D81 CRC64; MVGGQTVFEE DTLFVACTRP AMIAGVTMEA MGFNIMVTTI LYIIAGSIAY AFVGIVFHLI FKALVKHDHN MFRILLAWVE TRGRSRNGAY WGGATLSPLR LTRRFDERDI GIA // ID Q7PAP2_RICSI Unreviewed; 95 AA. AC Q7PAP2; DT 15-DEC-2003, integrated into UniProtKB/TrEMBL. DT 15-DEC-2003, sequence version 1. DT 13-NOV-2013, entry version 18. DE SubName: Full=Uncharacterized protein; GN ORFNames=rsib_orf574; OS Rickettsia sibirica 246. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group; OC Rickettsia sibirica subgroup. OX NCBI_TaxID=272951; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=246; RA Malek J.A., Eremeeva M.E., Dasch G.A.; RL Submitted (FEB-2003) to the EMBL/GenBank/DDBJ databases. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AABW01000001; EAA25795.1; -; Genomic_DNA. DR EnsemblBacteria; EAA25795; EAA25795; rsib_orf574. DR PATRIC; 30019436; VBIRicSib27963_0642. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 95 AA; 10736 MW; 8EA032673CBA7768 CRC64; MAGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAALHVVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID Q7WZM1_STEMA Unreviewed; 95 AA. AC Q7WZM1; DT 01-OCT-2003, integrated into UniProtKB/TrEMBL. DT 01-OCT-2003, sequence version 1. DT 13-NOV-2013, entry version 19. DE SubName: Full=Putative mating pair formation protein; GN Name=trbD; OS Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas OS maltophilia). OG Plasmid pBI1063. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Stenotrophomonas; OC Stenotrophomonas maltophilia group. OX NCBI_TaxID=40324; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pBI1063; RA Battermann A., Disque-Kochem C., Dreiseikelmann B.; RT "Characterization of the transfer region of the 68 kb plasmid RT pBI1063."; RL Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AY299014; AAP82051.1; -; Genomic_DNA. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 95 AA; 11056 MW; E8E59E9518C46D41 CRC64; MEEELEQANF YYALHRPQEV LGGERELTLF SMLLAGALIF TGMNWTTTFV GGSIWTVCWY FLKKMAKSDP IMSKVYITQL KYRPYYPAHS TPFAE // ID Q7X109_XANCI Unreviewed; 99 AA. AC Q7X109; DT 01-OCT-2003, integrated into UniProtKB/TrEMBL. DT 01-OCT-2003, sequence version 1. DT 14-MAY-2014, entry version 19. DE SubName: Full=VirB3; GN Name=virB3; OS Xanthomonas campestris pv. citri (Xanthomonas citri). OG Plasmid pXcB. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=346; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pXcB; RA Yuan Q., Brunings A.M., El-Yacoubi B., Shanker S., Gabriel D.W.; RT "A self-mobilizing plasmid from a South American citrus canker strain RT carries required pathogenicity gene pthB."; RL Submitted (JAN-2003) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AY228335; AAO72119.1; -; Genomic_DNA. DR RefSeq; NP_942609.1; NC_005240.1. DR GeneID; 2657449; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 99 AA; 11019 MW; 1135F9549F51C80C CRC64; MSAEEQFHDE GESLVAAMTR PTMVGGLTLA SLAMSFYFPG MAALITRSLW AAALIPVLLL ISYLVCLKDV YLFDIMSAAT HLKTCPNKRF WGCRRYAPR // ID Q7X264_9RHIZ Unreviewed; 102 AA. AC Q7X264; DT 01-OCT-2003, integrated into UniProtKB/TrEMBL. DT 01-OCT-2003, sequence version 1. DT 09-FEB-2010, entry version 12. DE SubName: Full=TrwM protein; GN Name=trwM; OS Bartonella tribocorum. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=85701; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=IBS 506T; RA Seubert A.K., Hiestand R., de la Cruz F., Dehio C.; RT "A broad-host-range plasmid conjugation machinery recruited for RT bacterial pathogenesis."; RL Submitted (JUL-2002) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AJ496288; CAD42843.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 102 AA; 12086 MW; A56432CA7A8C1945 CRC64; MKSKEQRDFP LFKGATRVPT IWGVPMMPLI VMVMGVAIVA MMINIFLWII APPLWFIMVQ ITKNDDKAFR IWWLWIDTKF RNRNKGFWGA SSYSPSDYSK RR // ID Q7X3L7_PSEPU Unreviewed; 99 AA. AC Q7X3L7; DT 01-OCT-2003, integrated into UniProtKB/TrEMBL. DT 01-OCT-2003, sequence version 1. DT 13-NOV-2013, entry version 14. DE SubName: Full=Putative mating pair formation protein; GN Name=mpfB; OS Pseudomonas putida (Arthrobacter siderocapsulatus). OG Plasmid pBI709. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. OX NCBI_TaxID=303; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pBI709; RA Battermann A., Disque-Kochem C., Dreiseikelmann B.; RT "Characterization of the transfer region of the conjugative 60 kb RT plasmid pBI709."; RL Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AY299015; AAP57227.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 99 AA; 10971 MW; 337AE1FBA6A25424 CRC64; MTTGEHKPDE GEVLVVAMAR PSMVGAFTMS SVLISIFAPL IAALLIRSLW PVALIPVLFG ASYYICSKDV YLFGVMQAAF RLRASQNRKV WGYRSYAPR // ID Q83UG8_PSEPU Unreviewed; 97 AA. AC Q83UG8; DT 01-JUN-2003, integrated into UniProtKB/TrEMBL. DT 01-JUN-2003, sequence version 1. DT 14-MAY-2014, entry version 22. DE SubName: Full=MpfB; DE SubName: Full=Putative mating pair formation protein; GN Name=mpfB; OS Pseudomonas putida (Arthrobacter siderocapsulatus). OG Plasmid pCg1, and Plasmid pDTG1. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. OX NCBI_TaxID=303; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pCg1; RX PubMed=12788725; DOI=10.1128/AEM.69.6.3263-3271.2003; RA Park W., Jeon C.O., Hohnstock-Ashe A.M., Winans S.C., Zylstra G.J., RA Madsen E.L.; RT "Identification and characterization of the conjugal transfer region RT of the pCg1 plasmid from naphthalene-degrading Pseudomonas putida RT Cg1."; RL Appl. Environ. Microbiol. 69:3263-3271(2003). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NCIB 9816-4; PLASMID=pDTG1; RX PubMed=15288784; DOI=10.1016/j.jmb.2004.06.034; RA Dennis J.J., Zylstra G.J.; RT "Complete sequence and genetic organization of pDTG1, the 83 kilobase RT naphthalene degradation plasmid from Pseudomonas putida strain NCIB RT 9816-4."; RL J. Mol. Biol. 341:753-768(2004). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AF491307; AAO64340.1; -; Genomic_DNA. DR EMBL; AY249147; AAP06660.1; -; Genomic_DNA. DR RefSeq; NP_863141.1; NC_004999.1. DR GeneID; 1343224; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 97 AA; 10850 MW; 4F3BA949339DD437 CRC64; MAEQDPDEGE VLVVAMARPS MVGPFTLSSI LISLITPVLA ALLLRSLYVL VTMPILFAAA YWICSKDVYL FGVLRAAFKL RASRLRKLWG YRSYAPR // ID Q84G58_RHILV Unreviewed; 99 AA. AC Q84G58; DT 01-JUN-2003, integrated into UniProtKB/TrEMBL. DT 01-JUN-2003, sequence version 1. DT 13-NOV-2013, entry version 18. DE SubName: Full=TrbD; GN Name=trbD; OS Rhizobium leguminosarum bv. viciae. OG Plasmid pRL1JI. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium. OX NCBI_TaxID=387; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pRL1JI; RX PubMed=14617175; DOI=10.1046/j.1365-2958.2003.03699.x; RA Danino V.E., Wilkinson A., Edwards A., Downie J.A.; RT "Recipient-induced transfer of the symbiotic plasmid pRL1JI in RT Rhizobium leguminosarum bv. viciae is regulated by a quorum-sensing RT relay."; RL Mol. Microbiol. 50:511-525(2003). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AY177731; AAO18657.1; -; Genomic_DNA. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 99 AA; 11421 MW; 3D21A54ECCD48EA6 CRC64; MAESLSGLRR NRIHRALSRP NLLMGADREL VLITGLAAVI LIFVVLTAYS ALFGIAVWVV IVRLLRMMAK SDPLMRQVYI RHISYKPYYK ATTSPWRRY // ID Q84HS3_RHIET Unreviewed; 99 AA. AC Q84HS3; DT 01-JUN-2003, integrated into UniProtKB/TrEMBL. DT 01-JUN-2003, sequence version 1. DT 14-MAY-2014, entry version 29. DE SubName: Full=Probable conjugal transfer protein TrbD; GN Name=trbD; OS Rhizobium etli. OG Plasmid p42a. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium. OX NCBI_TaxID=29449; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=CFN42; PLASMID=p42a; RX PubMed=12591886; DOI=10.1128/JB.185.5.1681-1692.2003; RA Tun-Garrido C., Bustos P., Gonzalez V., Brom S.; RT "Conjugative transfer of p42a from rhizobium etli CFN42, which is RT required for mobilization of the symbiotic plasmid, is regulated by RT quorum sensing."; RL J. Bacteriol. 185:1681-1692(2003). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AF528525; AAO43555.1; -; Genomic_DNA. DR RefSeq; YP_471765.1; NC_007762.1. DR GeneID; 3894881; -. DR KEGG; ret:RHE_PA00176; -. DR PATRIC; 23090373; VBIRhiEtl108884_4818. DR KO; K03198; -. DR OrthoDB; EOG6N6849; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 99 AA; 11318 MW; 0BD904E197453006 CRC64; MAESLSGLQR NRIHRALSRP NLLMGADREL VLITGLAAVI LIFVVLTVYS ALFGVAVWIV IVGLLRMMAK ADPLMRQVYV RHISYKHYYK ATSSPWRRY // ID Q89B79_BRADU Unreviewed; 92 AA. AC Q89B79; DT 01-JUN-2003, integrated into UniProtKB/TrEMBL. DT 01-JUN-2003, sequence version 1. DT 14-MAY-2014, entry version 52. DE SubName: Full=TrbD protein; GN Name=trbD; OrderedLocusNames=bsl8286; OS Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC OS 14792 / USDA 110). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Bradyrhizobium. OX NCBI_TaxID=224911; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110; RX PubMed=12597275; DOI=10.1093/dnares/9.6.189; RA Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., RA Sasamoto S., Watanabe A., Idesawa K., Iriguchi M., Kawashima K., RA Kohara M., Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., RA Tabata S.; RT "Complete genomic sequence of nitrogen-fixing symbiotic bacterium RT Bradyrhizobium japonicum USDA110."; RL DNA Res. 9:189-197(2002). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; BA000040; BAC53551.1; -; Genomic_DNA. DR RefSeq; NP_774926.1; NC_004463.1. DR STRING; 224911.bsl8286; -. DR EnsemblBacteria; BAC53551; BAC53551; BAC53551. DR GeneID; 1048117; -. DR KEGG; bja:bsl8286; -. DR PATRIC; 21200542; VBIBraJap65052_8497. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; BJAP224911:GJEJ-8344-MONOMER; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Reference proteome. SQ SEQUENCE 92 AA; 9766 MW; 83853E76FF0B6AA9 CRC64; MMAGIIDLDV PGFFAPVHRA LTEAILMGGA PRTVAIANGT LAAAIALGLH LWIPGALIWA VGHAAAVWAA KRDPQFVDVV RRHLRYPSYL GV // ID Q8GJ65_9RHIZ Unreviewed; 102 AA. AC Q8GJ65; DT 01-MAR-2003, integrated into UniProtKB/TrEMBL. DT 01-MAR-2003, sequence version 1. DT 09-FEB-2010, entry version 12. DE SubName: Full=VirB3 homologue; GN Name=virB3; OS Bartonella tribocorum. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=85701; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=IBS 506; RA Schulein R., Dehio C.; RT "The VirB/VirD4 type IV secretion system of Bartonella is essential RT for establishing intraerythrocytic infection."; RL Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AJ315957; CAC51478.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 102 AA; 11627 MW; 5AAADDA571AED874 CRC64; MNEDTLFLAC TRPAMFAGVT MEAMALNVMA TSVLFILTSD FTMFGLGIGM HFILREVTRY DHNQFRVLFA WLNTRGKQKN LNRWGGGSTS PLRLVRTYKE LS // ID Q8KIM7_RHIEC Unreviewed; 112 AA. AC Q8KIM7; DT 01-OCT-2002, integrated into UniProtKB/TrEMBL. DT 01-OCT-2002, sequence version 1. DT 14-MAY-2014, entry version 41. DE SubName: Full=Transport secretion system IV, VirB3 protein; GN OrderedLocusNames=RHE_PD00145; OS Rhizobium etli (strain CFN 42 / ATCC 51251). OG Plasmid sym p42d. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium. OX NCBI_TaxID=347834; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CFN 42 / ATCC 51251; RX PubMed=12801410; DOI=10.1186/gb-2003-4-6-r36; RA Gonzalez V., Bustos P., Ramirez-Romero M.A., Medrano-Soto A., RA Salgado H., Hernandez-Gonzalez I., Hernandez-Celis J.C., Quintero V., RA Moreno-Hagelsieb G., Girard L., Rodriguez O., Flores M., RA Cevallos M.A., Collado-Vides J., Romero D., Davila G.; RT "The mosaic structure of the symbiotic plasmid of Rhizobium etli CFN42 RT and its relation to other symbiotic genome compartments."; RL Genome Biol. 4:R36.1-R36.13(2003). RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CFN 42 / ATCC 51251; RX PubMed=16505379; DOI=10.1073/pnas.0508502103; RA Gonzalez V., Santamaria R.I., Bustos P., Hernandez-Gonzalez I., RA Medrano-Soto A., Moreno-Hagelsieb G., Janga S.C., Ramirez M.A., RA Jimenez-Jacinto V., Collado-Vides J., Davila G.; RT "The partitioned Rhizobium etli genome: genetic and metabolic RT redundancy in seven interacting replicons."; RL Proc. Natl. Acad. Sci. U.S.A. 103:3834-3839(2006). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; U80928; AAM54905.1; -; Genomic_DNA. DR RefSeq; NP_659892.1; NC_004041.2. DR STRING; 347834.RHE_PD00145; -. DR EnsemblBacteria; AAM54905; AAM54905; RHE_PD00145. DR GeneID; 1005302; -. DR KEGG; ret:RHE_PD00145; -. DR PATRIC; 23080884; VBIRhiEtl108884_0135. DR eggNOG; COG3702; -. DR KO; K03198; -. DR OMA; HDHNMFR; -. DR OrthoDB; EOG6VMTNS; -. DR BioCyc; RETL347834:GJJ0-5333-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 112 AA; 12524 MW; 93274A4AFDEABCFD CRC64; MASIPSLEDD TLFLACTRPA MIAGVTMEAM GVNIMLTTIL YITAGSIAYA LVGIVFHVLF RALVKHDHNM FRILIAWIET RGRSRNTAYW GGATLSPLTL TRRYDERDLS FV // ID Q8KJL5_RHILI Unreviewed; 108 AA. AC Q8KJL5; DT 01-OCT-2002, integrated into UniProtKB/TrEMBL. DT 01-OCT-2002, sequence version 1. DT 03-APR-2013, entry version 14. DE SubName: Full=PROBABLE VIRB3 TYPE IV SECRETION PROTEIN; GN Name=virB3; OS Rhizobium loti (Mesorhizobium loti). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Phyllobacteriaceae; Mesorhizobium. OX NCBI_TaxID=381; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=R7A; RX PubMed=12003951; DOI=10.1128/JB.184.11.3086-3095.2002; RA Sullivan J.T., Trzebiatowski J.R., Cruickshank R.W., Gouzy J., RA Brown S.D., Elliot R.M., Fleetwood D.J., McCallum N.G., Rossbach U., RA Stuart G.S., Weaver J.E., Webby R.J., de Bruijn F.J., Ronson C.W.; RT "Comparative sequence analysis of the symbiosis island of RT Mesorhizobium loti strain R7A."; RL J. Bacteriol. 184:3086-3095(2002). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AL672112; CAD31460.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 108 AA; 11606 MW; 3C70BB9FF7B2AE7D CRC64; MSDRLEVSTL YVAATRPALF LGVPLTLAGL LMMLAGLVII VLQNPLYEIV LVPLWFGARL VVERDYNAAS VALLYLQTAG RSVDGPVWGG ASVSVNPIRV PKRGRGMV // ID Q8KJN1_RHILI Unreviewed; 86 AA. AC Q8KJN1; DT 01-OCT-2002, integrated into UniProtKB/TrEMBL. DT 01-OCT-2002, sequence version 1. DT 03-APR-2013, entry version 17. DE SubName: Full=PROBABLE TRBD CONJUGAL TRANSFER PROTEIN; GN Name=trbD; OS Rhizobium loti (Mesorhizobium loti). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Phyllobacteriaceae; Mesorhizobium. OX NCBI_TaxID=381; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=R7A; RX PubMed=12003951; DOI=10.1128/JB.184.11.3086-3095.2002; RA Sullivan J.T., Trzebiatowski J.R., Cruickshank R.W., Gouzy J., RA Brown S.D., Elliot R.M., Fleetwood D.J., McCallum N.G., Rossbach U., RA Stuart G.S., Weaver J.E., Webby R.J., de Bruijn F.J., Ronson C.W.; RT "Comparative sequence analysis of the symbiosis island of RT Mesorhizobium loti strain R7A."; RL J. Bacteriol. 184:3086-3095(2002). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AL672112; CAD31433.1; -; Genomic_DNA. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; SQ SEQUENCE 86 AA; 9227 MW; 9FAA22FCD84379B2 CRC64; MQHIEGFEVP VHRALTEPIL LGGAPRAVAI LNGTVAAAIG LGLQQWIAGL VLWLGGHTLA VFAARRDPDF ASVLVRHLRL RGWLAC // ID Q8P7Y0_XANCP Unreviewed; 103 AA. AC Q8P7Y0; DT 01-OCT-2002, integrated into UniProtKB/TrEMBL. DT 01-OCT-2002, sequence version 1. DT 14-MAY-2014, entry version 42. DE SubName: Full=VirB3 protein; GN OrderedLocusNames=XCC2475; OS Xanthomonas campestris pv. campestris (strain ATCC 33913 / NCPPB 528 / OS LMG 568). OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=190485; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 33913 / NCPPB 528 / LMG 568; RX PubMed=12024217; DOI=10.1038/417459a; RA da Silva A.C.R., Ferro J.A., Reinach F.C., Farah C.S., Furlan L.R., RA Quaggio R.B., Monteiro-Vitorello C.B., Van Sluys M.A., RA Almeida N.F. Jr., Alves L.M.C., do Amaral A.M., Bertolini M.C., RA Camargo L.E.A., Camarotte G., Cannavan F., Cardozo J., Chambergo F., RA Ciapina L.P., Cicarelli R.M.B., Coutinho L.L., Cursino-Santos J.R., RA El-Dorry H., Faria J.B., Ferreira A.J.S., Ferreira R.C.C., RA Ferro M.I.T., Formighieri E.F., Franco M.C., Greggio C.C., Gruber A., RA Katsuyama A.M., Kishi L.T., Leite R.P., Lemos E.G.M., Lemos M.V.F., RA Locali E.C., Machado M.A., Madeira A.M.B.N., Martinez-Rossi N.M., RA Martins E.C., Meidanis J., Menck C.F.M., Miyaki C.Y., Moon D.H., RA Moreira L.M., Novo M.T.M., Okura V.K., Oliveira M.C., Oliveira V.R., RA Pereira H.A., Rossi A., Sena J.A.D., Silva C., de Souza R.F., RA Spinola L.A.F., Takita M.A., Tamura R.E., Teixeira E.C., Tezza R.I.D., RA Trindade dos Santos M., Truffi D., Tsai S.M., White F.F., RA Setubal J.C., Kitajima J.P.; RT "Comparison of the genomes of two Xanthomonas pathogens with differing RT host specificities."; RL Nature 417:459-463(2002). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AE008922; AAM41751.1; -; Genomic_DNA. DR RefSeq; NP_637827.1; NC_003902.1. DR STRING; 190485.XCC2475; -. DR EnsemblBacteria; AAM41751; AAM41751; XCC2475. DR GeneID; 1000482; -. DR KEGG; xcc:XCC2475; -. DR PATRIC; 24075895; VBIXanCam115730_2642. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; MAKRDEM; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; XCAM190485:GIXZ-2473-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Reference proteome. SQ SEQUENCE 103 AA; 12245 MW; 30DE80793FCA6493 CRC64; MHKDVLFRGC TRPAMFLGVP YIPFFIGAGG GLLLGMYFNL WYLLTIPVII FVMQQVAKRD EMIFRLLGLR WLFRMRVRNI QRYSGMWVFS PNEYRKHPAG KRQ // ID Q8PJC0_XANAC Unreviewed; 103 AA. AC Q8PJC0; DT 01-OCT-2002, integrated into UniProtKB/TrEMBL. DT 01-OCT-2002, sequence version 1. DT 14-MAY-2014, entry version 46. DE SubName: Full=VirB3 protein; GN Name=virB3; OrderedLocusNames=XAC2615; OS Xanthomonas axonopodis pv. citri (strain 306). OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=190486; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=306; RX PubMed=12024217; DOI=10.1038/417459a; RA da Silva A.C.R., Ferro J.A., Reinach F.C., Farah C.S., Furlan L.R., RA Quaggio R.B., Monteiro-Vitorello C.B., Van Sluys M.A., RA Almeida N.F. Jr., Alves L.M.C., do Amaral A.M., Bertolini M.C., RA Camargo L.E.A., Camarotte G., Cannavan F., Cardozo J., Chambergo F., RA Ciapina L.P., Cicarelli R.M.B., Coutinho L.L., Cursino-Santos J.R., RA El-Dorry H., Faria J.B., Ferreira A.J.S., Ferreira R.C.C., RA Ferro M.I.T., Formighieri E.F., Franco M.C., Greggio C.C., Gruber A., RA Katsuyama A.M., Kishi L.T., Leite R.P., Lemos E.G.M., Lemos M.V.F., RA Locali E.C., Machado M.A., Madeira A.M.B.N., Martinez-Rossi N.M., RA Martins E.C., Meidanis J., Menck C.F.M., Miyaki C.Y., Moon D.H., RA Moreira L.M., Novo M.T.M., Okura V.K., Oliveira M.C., Oliveira V.R., RA Pereira H.A., Rossi A., Sena J.A.D., Silva C., de Souza R.F., RA Spinola L.A.F., Takita M.A., Tamura R.E., Teixeira E.C., Tezza R.I.D., RA Trindade dos Santos M., Truffi D., Tsai S.M., White F.F., RA Setubal J.C., Kitajima J.P.; RT "Comparison of the genomes of two Xanthomonas pathogens with differing RT host specificities."; RL Nature 417:459-463(2002). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AE008923; AAM37464.1; -; Genomic_DNA. DR RefSeq; NP_642928.1; NC_003919.1. DR STRING; 190486.XAC2615; -. DR EnsemblBacteria; AAM37464; AAM37464; XAC2615. DR GeneID; 1156686; -. DR KEGG; xac:XAC2615; -. DR PATRIC; 24057311; VBIXanAxo33670_2713. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; MAKRDEM; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; XAXO190486:GH55-2615-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 103 AA; 12150 MW; 9CBD4F9F98B53379 CRC64; MHKDVLFRGC TRPAMFLGVP YIPFFIGAGG GLLLGMYIDL WYLLTIPVII FAMQQMAKRD EMIFRLLGLR WLFRMRARNL QRYSGMWVFS PNEYRKNPPG KSR // ID Q8PRI6_XANAC Unreviewed; 99 AA. AC Q8PRI6; DT 01-OCT-2002, integrated into UniProtKB/TrEMBL. DT 01-OCT-2002, sequence version 1. DT 14-MAY-2014, entry version 39. DE SubName: Full=VirB3 protein; GN Name=virB3; OrderedLocusNames=XACb0046; OS Xanthomonas axonopodis pv. citri (strain 306). OG Plasmid pXAC64. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xanthomonas. OX NCBI_TaxID=190486; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=306; PLASMID=pXAC64; RX PubMed=12024217; DOI=10.1038/417459a; RA da Silva A.C.R., Ferro J.A., Reinach F.C., Farah C.S., Furlan L.R., RA Quaggio R.B., Monteiro-Vitorello C.B., Van Sluys M.A., RA Almeida N.F. Jr., Alves L.M.C., do Amaral A.M., Bertolini M.C., RA Camargo L.E.A., Camarotte G., Cannavan F., Cardozo J., Chambergo F., RA Ciapina L.P., Cicarelli R.M.B., Coutinho L.L., Cursino-Santos J.R., RA El-Dorry H., Faria J.B., Ferreira A.J.S., Ferreira R.C.C., RA Ferro M.I.T., Formighieri E.F., Franco M.C., Greggio C.C., Gruber A., RA Katsuyama A.M., Kishi L.T., Leite R.P., Lemos E.G.M., Lemos M.V.F., RA Locali E.C., Machado M.A., Madeira A.M.B.N., Martinez-Rossi N.M., RA Martins E.C., Meidanis J., Menck C.F.M., Miyaki C.Y., Moon D.H., RA Moreira L.M., Novo M.T.M., Okura V.K., Oliveira M.C., Oliveira V.R., RA Pereira H.A., Rossi A., Sena J.A.D., Silva C., de Souza R.F., RA Spinola L.A.F., Takita M.A., Tamura R.E., Teixeira E.C., Tezza R.I.D., RA Trindade dos Santos M., Truffi D., Tsai S.M., White F.F., RA Setubal J.C., Kitajima J.P.; RT "Comparison of the genomes of two Xanthomonas pathogens with differing RT host specificities."; RL Nature 417:459-463(2002). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AE008925; AAM39292.1; -; Genomic_DNA. DR RefSeq; NP_644774.1; NC_003922.1. DR STRING; 190486.XACb0046; -. DR EnsemblBacteria; AAM39292; AAM39292; XACb0046. DR GeneID; 1158533; -. DR KEGG; xac:XACb0046; -. DR KO; K03198; -. DR OMA; DIMSAAT; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; XAXO190486:GH55-4420-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 99 AA; 11005 MW; 0B84524E2EFB780D CRC64; MSADEQFHDE GESLVAAMTR PTMVGGLTLA SLAMSFYFPG MAALITRSLW AAALIPVLLL ISYLVCLKDV YLFDIMSAAT HLKTCPNKRF WGCRRYAPR // ID Q8RPM7_ANAPH Unreviewed; 97 AA. AC Q8RPM7; DT 01-JUN-2002, integrated into UniProtKB/TrEMBL. DT 01-JUN-2002, sequence version 1. DT 03-APR-2013, entry version 15. DE SubName: Full=Type IV secretion system protein VirB3; DE SubName: Full=VirB3; GN Name=virB3; OS Anaplasma phagocytophilum (Ehrlichia phagocytophila). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Anaplasma; phagocytophilum group. OX NCBI_TaxID=948; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=HZ; RX PubMed=11895979; DOI=10.1128/IAI.70.4.2128-2138.2002; RA Ohashi N., Zhi N., Lin Q., Rikihisa Y.; RT "Characterization and transcriptional analysis of gene clusters for a RT type IV secretion machinery in human granulocytic and monocytic RT ehrlichiosis agents."; RL Infect. Immun. 70:2128-2138(2002). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Dog1, Dog2, JM, MRK, NorLamb-V1, NorLamb-V2, and Var-1; RX PubMed=23190684; DOI=10.1186/1471-2164-13-678; RA Al-Khedery B., Lundgren A.M., Stuen S., Granquist E.G., RA Munderloh U.G., Nelson C.M., Alleman A.R., Mahan S.M., Barbet A.F.; RT "Structure of the type IV secretion system in different strains of RT Anaplasma phagocytophilum."; RL BMC Genomics 13:678-678(2012). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AF392616; AAM00406.1; -; Genomic_DNA. DR EMBL; JX415854; AFY26706.1; -; Genomic_DNA. DR EMBL; JX415878; AFY26730.1; -; Genomic_DNA. DR EMBL; JX415902; AFY26754.1; -; Genomic_DNA. DR EMBL; JX415925; AFY26777.1; -; Genomic_DNA. DR EMBL; JX415953; AFY26805.1; -; Genomic_DNA. DR EMBL; JX415983; AFY26835.1; -; Genomic_DNA. DR EMBL; JX416006; AFY26858.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 97 AA; 11112 MW; 46BC46A393C684A2 CRC64; MSGSVKADQL FKGLTRPTML FGVSYTFAIM NFMLSIMIFM YSNDFRVLFI LAPGMHGLGF IASAKDPLFM DLLIIRMQKC SKCLNRFYHN SNSYDVM // ID Q8RPN3_EHRCH Unreviewed; 97 AA. AC Q8RPN3; DT 01-JUN-2002, integrated into UniProtKB/TrEMBL. DT 01-JUN-2002, sequence version 1. DT 03-APR-2013, entry version 15. DE SubName: Full=VirB3; GN Name=virB3; OS Ehrlichia chaffeensis. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Anaplasmataceae; Ehrlichia. OX NCBI_TaxID=945; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Arkansas; RX PubMed=11895979; DOI=10.1128/IAI.70.4.2128-2138.2002; RA Ohashi N., Zhi N., Lin Q., Rikihisa Y.; RT "Characterization and transcriptional analysis of gene clusters for a RT type IV secretion machinery in human granulocytic and monocytic RT ehrlichiosis agents."; RL Infect. Immun. 70:2128-2138(2002). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AF392615; AAM00402.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 97 AA; 11170 MW; 8FB3C3C90AAE9B2A CRC64; MAGTVKADQL FKGLTRPTML FGVSYIFAML NFMICIMIFM YTNDFRALFI LGPGIHSVGF LASSKEPLFL ELFMLRMKKC SKCLNRFYHN ANSYDVM // ID Q8RSJ4_9BACT Unreviewed; 103 AA. AC Q8RSJ4; DT 01-JUN-2002, integrated into UniProtKB/TrEMBL. DT 01-JUN-2002, sequence version 1. DT 14-MAY-2014, entry version 30. DE SubName: Full=Mating pair formation protein; DE SubName: Full=TrbD; DE SubName: Full=TrbD protein; GN Name=trbD; OS uncultured bacterium. OG Plasmid pAKD26, Plasmid pB12, and Plasmid pB4. OC Bacteria; environmental samples. OX NCBI_TaxID=77133; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pB4; RX PubMed=12589432; RA Tauch A., Schluter A., Bischoff N., Goesmann A., Meyer F., Puhler A.; RT "The 79,370-bp conjugative plasmid pB4 consists of an IncP-1beta RT backbone loaded with a chromate resistance transposon, the strA-strB RT streptomycin resistance gene pair, the oxacillinase gene bla(NPS-1), RT and a tripartite antibiotic efflux system of the resistance- RT nodulation-division family."; RL Mol. Genet. Genomics 268:570-584(2003). RN [2] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pAKD26; RX PubMed=21948829; DOI=10.1128/AEM.05439-11; RA Sen D., Van der Auwera G.A., Rogers L.M., Thomas C.M., Brown C.J., RA Top E.M.; RT "Broad-host-range plasmids from agricultural soils have IncP-1 RT backbones with diverse accessory genes."; RL Appl. Environ. Microbiol. 77:7975-7983(2011). RN [3] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pB12; RX PubMed=22936717; DOI=10.1093/molbev/mss210; RA Sen D., Brown C.J., Top E.M., Sullivan J.; RT "Inferring the evolutionary history of IncP-1 plasmids despite RT incongruence among backbone gene trees."; RL Mol. Biol. Evol. 30:154-166(2013). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JN106171; AEV57122.1; -; Genomic_DNA. DR EMBL; JX469826; AFR43790.1; -; Genomic_DNA. DR EMBL; AJ431260; CAD24370.1; -; Genomic_DNA. DR RefSeq; NP_598145.1; NC_003430.1. DR GeneID; 1245422; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11860 MW; D54CECAB78AD75E2 CRC64; MALRAIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QEVRATVFGI ALWFGALFVL RLMAKSDPKL RHVYLRHRRY KPYYPARSTP FRENTPSQGK QYK // ID Q8VRD6_HAEIF Unreviewed; 118 AA. AC Q8VRD6; DT 01-MAR-2002, integrated into UniProtKB/TrEMBL. DT 01-MAR-2002, sequence version 1. DT 14-MAY-2014, entry version 24. DE SubName: Full=TraA/VirB3-like protein; DE SubName: Full=TraD-like protein; GN Name=bpl13; OS Haemophilus influenzae biotype aegyptius. OG Plasmid pF3028, and Plasmid pF3031. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; OC Pasteurellaceae; Haemophilus. OX NCBI_TaxID=725; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pF3031; RA Mukhopadhyay S., Actis L.A.; RT "Nucleotide sequence and analysis of the plasmid pF3031 from the RT Brazilian purpuric fever clone of Haemophilus influenzae biogroup RT aegyptius."; RL Submitted (NOV-2001) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=BPF; PLASMID=pF3028; RX PubMed=12206754; DOI=10.1016/S0147-619X(02)00020-3; RA Kroll J.S., Farrant J.L., Tyler S., Coulthart M.B., Langford P.R.; RT "Characterisation and genetic organisation of a 24-MDa plasmid from RT the Brazilian Purpuric Fever clone of Haemophilus influenzae biogroup RT aegyptius."; RL Plasmid 48:38-48(2002). RN [3] RP NUCLEOTIDE SEQUENCE. RC STRAIN=BPF; PLASMID=pF3028; RA Kroll S., Farrant J., Tyler S., Coulthart M., Langford P.; RL Submitted (JAN-2002) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AF447808; AAL47109.1; -; Genomic_DNA. DR EMBL; AF469177; AAM64126.1; -; Genomic_DNA. DR RefSeq; NP_660229.1; NC_004058.1. DR RefSeq; NP_858094.1; NC_004846.1. DR GeneID; 1243320; -. DR GeneID; 4594829; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 118 AA; 13450 MW; 8AE6F35B6D770F4A CRC64; MSDLNESYPS FNGMNRPAMV FGVPMVAALF VLCFMVVSGF LGSFLNWGFY SLILPTIGAL YLFFLKIVCE DDPNALAFIK WRLKAILIKQ AQGNPVILLT SDSKKREVYN ARRQFKKW // ID Q8VTA0_RHIRD Unreviewed; 108 AA. AC Q8VTA0; DT 01-MAR-2002, integrated into UniProtKB/TrEMBL. DT 01-MAR-2002, sequence version 1. DT 13-NOV-2013, entry version 20. DE SubName: Full=VirB3; GN Name=virB3; OS Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium OS radiobacter). OG Plasmid pTiAB2/73. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=358; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=AB2/73; PLASMID=pTiAB2/73; RA Schmidt J., Hammann P., Otten L.; RT "Comparison of the vir regions of the Agrobacterium tumefaciens RT limited host range strain AB2/73 with those of broad host range RT Agrobacterium strains."; RL Submitted (DEC-2000) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AF329849; AAL57011.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 108 AA; 11716 MW; 7BDC8181789562EB CRC64; MTEDLEEATL YLAATRPALF FGVPLTLAGL FMMLAGFLIV IVQNPLYEIV LLPLWLGARL VVERDYNAAS VVLLFLRTAG RSVDGHTWGG ASVSPNPTRV APRGRGMT // ID Q8XW93_RALSO Unreviewed; 90 AA. AC Q8XW93; DT 01-MAR-2002, integrated into UniProtKB/TrEMBL. DT 01-MAR-2002, sequence version 1. DT 14-MAY-2014, entry version 52. DE SubName: Full=Probable conjugal transfer trbd transmembrane protein; GN Name=trbD; OrderedLocusNames=RSc2582; OS Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum). OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Burkholderiaceae; Ralstonia. OX NCBI_TaxID=267608; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=GMI1000; RX PubMed=11823852; DOI=10.1038/415497a; RA Salanoubat M., Genin S., Artiguenave F., Gouzy J., Mangenot S., RA Arlat M., Billault A., Brottier P., Camus J.-C., Cattolico L., RA Chandler M., Choisne N., Claudel-Renard C., Cunnac S., Demange N., RA Gaspin C., Lavie M., Moisan A., Robert C., Saurin W., Schiex T., RA Siguier P., Thebault P., Whalen M., Wincker P., Levy M., RA Weissenbach J., Boucher C.A.; RT "Genome sequence of the plant pathogen Ralstonia solanacearum."; RL Nature 415:497-502(2002). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AL646052; CAD16289.1; -; Genomic_DNA. DR RefSeq; NP_520703.1; NC_003295.1. DR STRING; 267608.RSc2582; -. DR EnsemblBacteria; CAD16289; CAD16289; RSc2582. DR GeneID; 1221429; -. DR KEGG; rso:RSc2582; -. DR PATRIC; 20263869; VBIRalSol70888_2626. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; WAIGHIA; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; RSOL267608:GCVU-2624-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome; Membrane; Transmembrane. SQ SEQUENCE 90 AA; 9584 MW; 5F967F857AC5A5E8 CRC64; MSGPDSFAAG FEVPLHRSLT EPILMGGAPR TVAIANGTLA AAVGLGLQLW IPGVVLWIVG HSMAVWGARV DPQFMQVFAR HIKHKSLLDV // ID Q91UQ7_9BACT Unreviewed; 107 AA. AC Q91UQ7; DT 01-DEC-2001, integrated into UniProtKB/TrEMBL. DT 01-DEC-2001, sequence version 1. DT 14-MAY-2014, entry version 26. DE SubName: Full=TraD protein; GN Name=traD; OS uncultured bacterium. OG Plasmid pSB102. OC Bacteria; environmental samples. OX NCBI_TaxID=77133; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pSB102; RX PubMed=11812851; DOI=10.1093/nar/29.24.5169; RA Schneiker S., Keller M., Droege M., Lanka E., Puehler A., RA Selbitschka W.; RT "The genetic organization and evolution of the broad host range RT mercury resistance plasmid pSB102 isolated from a microbial population RT residing in the rhizosphere of alfalfa."; RL Nucleic Acids Res. 29:5169-5181(2001). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AJ304453; CAC79180.1; -; Genomic_DNA. DR RefSeq; NP_361049.1; NC_003122.1. DR GeneID; 1263101; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 107 AA; 12019 MW; F0E8E7C9EC9C9386 CRC64; MSAPMDMQDP RDPLFKGCTR PAMVFGVPLV PLAVVSGVVI LIAVWTTVFL ALALFPIVLT MRLIAKSDDQ QFRLLGLKLL FRGVNYNHNG RFWKASAYSP IPFKKRK // ID Q91UX5_9BACT Unreviewed; 107 AA. AC Q91UX5; DT 01-DEC-2001, integrated into UniProtKB/TrEMBL. DT 01-DEC-2001, sequence version 1. DT 14-MAY-2014, entry version 24. DE SubName: Full=TraD protein; GN Name=traD; OS uncultured bacterium. OG Plasmid pIPO2T. OC Bacteria; environmental samples. OX NCBI_TaxID=77133; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pIPO2T; RX PubMed=12055285; RA Tauch A., Schneiker S., Selbitschka W., Puehler A., van Overbeek L.S., RA Smalla K., Thomas C.M., Bailey M.J., Forney L.J., Weightman A., RA Ceglowski P., Pembroke T., Tietze E., Schroeder G., Lanka E., RA van Elsas J.D.; RT "The complete nucleotide sequence and environmental distribution of RT the cryptic, conjugative, broad-host-range plasmid pIPO2 isolated from RT bacteria of the wheat rhizosphere."; RL Microbiology 148:1637-1653(2002). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AJ297913; CAC82750.1; -; Genomic_DNA. DR RefSeq; NP_444520.1; NC_003213.2. DR GeneID; 1263182; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 107 AA; 12075 MW; D9C6E497D46E9672 CRC64; MSAPMEEFDP RDPLFKGCTR PAMMFGVPLV PLAAVSVVVI LLSVWTTIFV AATLVPIILT MRQIAKSDDQ QFRLLGLKLL FRGVNYNHNA KFWKASAYSP FAFKKRK // ID Q92JC7_RICCN Unreviewed; 95 AA. AC Q92JC7; DT 01-DEC-2001, integrated into UniProtKB/TrEMBL. DT 01-DEC-2001, sequence version 1. DT 14-MAY-2014, entry version 49. DE SubName: Full=Uncharacterized protein; GN OrderedLocusNames=RC0140; OS Rickettsia conorii (strain ATCC VR-613 / Malish 7). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. OX NCBI_TaxID=272944; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC VR-613 / Malish 7; RX PubMed=11557893; DOI=10.1126/science.1061471; RA Ogata H., Audic S., Renesto-Audiffren P., Fournier P.-E., Barbe V., RA Samson D., Roux V., Cossart P., Weissenbach J., Claverie J.-M., RA Raoult D.; RT "Mechanisms of evolution in Rickettsia conorii and R. prowazekii."; RL Science 293:2093-2098(2001). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AE006914; AAL02678.1; -; Genomic_DNA. DR PIR; D97717; D97717. DR RefSeq; NP_359777.1; NC_003103.1. DR STRING; 272944.RC0140; -. DR EnsemblBacteria; AAL02678; AAL02678; RC0140. DR GeneID; 928054; -. DR KEGG; rco:RC0140; -. DR PATRIC; 17887405; VBIRicCon45613_0164. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; WRHALEV; -. DR OrthoDB; EOG6N3CWS; -. DR GO; GO:0016746; F:transferase activity, transferring acyl groups; IEA:UniProtKB-KW. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Acyltransferase; Complete proteome; Transferase. SQ SEQUENCE 95 AA; 10750 MW; 7253E0673CBA777C CRC64; MAGALASDLL FVGLTRPPMI FGVSIKFAAL NMIMTMIVFI WNNGIMILFI AAALHLVAYI ICFKEPRFIE LYLNKMSRTS QCPNKFYYGA NSYNI // ID Q92YZ5_RHIME Unreviewed; 113 AA. AC Q92YZ5; DT 01-DEC-2001, integrated into UniProtKB/TrEMBL. DT 02-SEP-2008, sequence version 2. DT 14-MAY-2014, entry version 46. DE SubName: Full=VirB3 type IV secretion protein; GN Name=virB3; ORFNames=SMa1318; OS Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium OS meliloti). OG Plasmid pSymA. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. OX NCBI_TaxID=266834; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=1021; PLASMID=pSymA; RX PubMed=11481432; DOI=10.1073/pnas.161294798; RA Barnett M.J., Fisher R.F., Jones T., Komp C., Abola A.P., RA Barloy-Hubler F., Bowser L., Capela D., Galibert F., Gouzy J., RA Gurjal M., Hong A., Huizar L., Hyman R.W., Kahn D., Kahn M.L., RA Kalman S., Keating D.H., Palm C., Peck M.C., Surzycki R., Wells D.H., RA Yeh K.-C., Davis R.W., Federspiel N.A., Long S.R.; RT "Nucleotide sequence and predicted functions of the entire RT Sinorhizobium meliloti pSymA megaplasmid."; RL Proc. Natl. Acad. Sci. U.S.A. 98:9883-9888(2001). RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=1021; RX PubMed=11474104; DOI=10.1126/science.1060966; RA Galibert F., Finan T.M., Long S.R., Puehler A., Abola P., Ampe F., RA Barloy-Hubler F., Barnett M.J., Becker A., Boistard P., Bothe G., RA Boutry M., Bowser L., Buhrmester J., Cadieu E., Capela D., Chain P., RA Cowie A., Davis R.W., Dreano S., Federspiel N.A., Fisher R.F., RA Gloux S., Godrie T., Goffeau A., Golding B., Gouzy J., Gurjal M., RA Hernandez-Lucas I., Hong A., Huizar L., Hyman R.W., Jones T., Kahn D., RA Kahn M.L., Kalman S., Keating D.H., Kiss E., Komp C., Lelaure V., RA Masuy D., Palm C., Peck M.C., Pohl T.M., Portetelle D., Purnelle B., RA Ramsperger U., Surzycki R., Thebault P., Vandenbol M., RA Vorhoelter F.J., Weidner S., Wells D.H., Wong K., Yeh K.-C., Batut J.; RT "The composite genome of the legume symbiont Sinorhizobium meliloti."; RL Science 293:668-672(2001). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AE006469; AAK65375.2; -; Genomic_DNA. DR RefSeq; NP_435963.2; NC_003037.1. DR ProteinModelPortal; Q92YZ5; -. DR STRING; 266834.SMa1318; -. DR EnsemblBacteria; AAK65375; AAK65375; SMa1318. DR GeneID; 1235753; -. DR KEGG; sme:SMa1318; -. DR PATRIC; 23627918; VBISinMel96828_0738. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OrthoDB; EOG6VMTNS; -. DR BioCyc; SMEL266834:GJF6-5723-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 113 AA; 12516 MW; CA5ABDA7739AFF28 CRC64; MADSGPAFEE DTLFIACTRP AMIAGVTMEA MGMNIMLTTI LYIVAGSVAY ALVGVVFHLV FRALVKHDHN MFRILLAWIE TRGRSRNSAF WGGATLSPMK LARKYDERDL GFA // ID Q93DC2_RHIRD Unreviewed; 113 AA. AC Q93DC2; DT 01-DEC-2001, integrated into UniProtKB/TrEMBL. DT 01-DEC-2001, sequence version 1. DT 24-JUL-2013, entry version 22. DE SubName: Full=AvhB3; GN Name=avhB3; OS Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium OS radiobacter). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=358; RN [1] RP NUCLEOTIDE SEQUENCE. RX PubMed=12169609; DOI=10.1128/JB.184.17.4838-4845.2002; RA Chen L., Chen Y., Wood D.W., Nester E.W.; RT "A new type IV secretion system promotes conjugal transfer in RT Agrobacterium tumefaciens."; RL J. Bacteriol. 184:4838-4845(2002). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AF396671; AAL04061.1; -; Genomic_DNA. DR PIR; AH3179; AH3179. DR ProteinModelPortal; Q93DC2; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 113 AA; 12599 MW; 86ADD5207D536D81 CRC64; MVGGQTVFEE DTLFVACTRP AMIAGVTMEA MGFNIMVTTI LYIIAGSIAY AFVGIVFHLI FKALVKHDHN MFRILLAWVE TRGRSRNGAY WGGATLSPLR LTRRFDERDI GIA // ID Q93UW8_RHIRD Unreviewed; 99 AA. AC Q93UW8; DT 01-DEC-2001, integrated into UniProtKB/TrEMBL. DT 01-DEC-2001, sequence version 1. DT 11-DEC-2013, entry version 24. DE SubName: Full=Conjugative transfer protein TrbD; DE SubName: Full=TrbD protein; GN Name=trbD; OS Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium OS radiobacter). OG Plasmid pAoF64/95, and Plasmid pRiA4b. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=358; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=A4; PLASMID=pRiA4b; RA Liang Y., Aoyama T., Oka A.; RT "Organization of the conjugal transfer genes of the hairy-root- RT inducing plasmid A4."; RL Submitted (NOV-2000) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=F64/95; PLASMID=pAoF64/95; RG W.M. Keck Center for Comparative and Functional Genomics; RG University of Illinois at Urbana Champaign; RA Wetzel M.E., Kim K.-S., Olsen G.J., Farrand S.K.; RT "Quorum-Dependent Mannopine-Inducible Conjugative Transfer of an RT Agrobacterium Opine-Catabolic Plasmid."; RL Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; JX683454; AFX65739.1; -; Genomic_DNA. DR EMBL; AB050904; BAB47265.1; -; Genomic_DNA. DR RefSeq; YP_007013552.1; NC_019555.1. DR GeneID; 14022287; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 99 AA; 11317 MW; 39A4607670D84E68 CRC64; MAESLSGLRH NRIHRALSRP NLLMGADREL VLITGLAAVI LIFVVLTAYS AIFGIAVWIV IVGLLRMMAK SDPLMRQVYI RHISYKPYYK ATTSPWRRY // ID Q93V31_RHIRD Unreviewed; 108 AA. AC Q93V31; DT 01-DEC-2001, integrated into UniProtKB/TrEMBL. DT 01-DEC-2001, sequence version 1. DT 14-MAY-2014, entry version 28. DE SubName: Full=Tiorf143 protein; GN Name=tiorf143; OS Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium OS radiobacter). OG Plasmid pTi-SAKURA. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=358; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MAFF 301001; PLASMID=pTi-SAKURA; RX PubMed=9524202; DOI=10.1016/S0167-4781(97)00182-6; RA Suzuki K., Ohta N., Hattori Y., Uraji M., Katoh A., Yoshida K.; RT "Novel structural difference between nopaline- and octopine-type trbJ RT genes: construction of genetic and physical map and sequencing of RT trb/traI and rep gene clusters of a new Ti plasmid pTi-SAKURA."; RL Biochim. Biophys. Acta 1396:1-7(1998). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MAFF 301001; PLASMID=pTi-SAKURA; RA Hattori Y., Suzuki K., Ohta N., Uraji M., Katoh A., Yoshida K.; RT "Genome structure of pTi-SAKURA(I): Strategy for DNA sequencing of a RT Japanese cherry-Ti plasmid."; RL Nucleic Acids Symp. Ser. 37:159-160(1998). RN [3] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MAFF 301001; PLASMID=pTi-SAKURA; RA Ohta N., Suzuki K., Hattori Y., Uraji M., Katoh A., Yoshida K.; RT "Genome structure of pTi-SAKURA (III): Characteristics of T-DNA."; RL Nucleic Acids Symp. Ser. 39:185-186(1998). RN [4] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MAFF 301001; PLASMID=pTi-SAKURA; RA Uraji M., Suzuki K., Ohta N., Hattori Y., Katoh A., Yoshida K.; RT "Genome structure of pTi-SAKURA (IV): Characteristics of tra region."; RL Nucleic Acids Symp. Ser. 39:187-188(1998). RN [5] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MAFF 301001; PLASMID=pTi-SAKURA; RA Hattori Y., Suzuki K., Ohta N., Uraji M., Katoh A., Yoshida K.; RT "Genome structure of pTi-SAKURA (V): Complete nucleotide sequence of RT plasmid pTi-SAKURA's vir region in Agrobacterium tumefaciens."; RL Nucleic Acids Symp. Ser. 39:265-266(1998). RN [6] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MAFF 301001; PLASMID=pTi-SAKURA; RX PubMed=10721727; DOI=10.1016/S0378-1119(99)00502-8; RA Suzuki K., Hattori Y., Uraji M., Ohta N., Iwata K., Murata K., RA Katoh A., Yoshida K.; RT "Complete nucleotide sequence of a plant tumor-inducing Ti plasmid."; RL Gene 242:331-336(2000). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AB016260; BAA87768.1; -; Genomic_DNA. DR PIR; AG3248; AG3248. DR PIR; S12343; B3AG58. DR RefSeq; NP_053383.1; NC_002147.1. DR ProteinModelPortal; Q93V31; -. DR GeneID; 1224137; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 108 AA; 11596 MW; 476D3CF9947E73EF CRC64; MNDRLEEATL YLAATRPALF LGVPLTLAGL LVMFAGFVIV IVQNPLYEVV LVPLWFGARL VVERDYNAAS VVLLFLQTAG RSVDGLIWGG ASVSPNPIKV PARGRGMA // ID Q981S6_RHILO Unreviewed; 102 AA. AC Q981S6; DT 01-OCT-2001, integrated into UniProtKB/TrEMBL. DT 01-OCT-2001, sequence version 1. DT 14-MAY-2014, entry version 48. DE SubName: Full=Conjugal transfer protein; GN OrderedLocusNames=mlr9250; OS Rhizobium loti (strain MAFF303099) (Mesorhizobium loti). OG Plasmid pMLa. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Phyllobacteriaceae; Mesorhizobium. OX NCBI_TaxID=266835; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MAFF303099; PLASMID=pMLa; RX PubMed=11214968; DOI=10.1093/dnares/7.6.331; RA Kaneko T., Nakamura Y., Sato S., Asamizu E., Kato T., Sasamoto S., RA Watanabe A., Idesawa K., Ishikawa A., Kawashima K., Kimura T., RA Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., RA Mochizuki Y., Nakayama S., Nakazaki N., Shimpo S., Sugimoto M., RA Takeuchi C., Yamada M., Tabata S.; RT "Complete genome structure of the nitrogen-fixing symbiotic bacterium RT Mesorhizobium loti."; RL DNA Res. 7:331-338(2000). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; BA000013; BAB54633.1; -; Genomic_DNA. DR RefSeq; NP_085792.1; NC_002679.1. DR STRING; 266835.mlr9250; -. DR EnsemblBacteria; BAB54633; BAB54633; BAB54633. DR GeneID; 1231430; -. DR KEGG; mlo:mlr9250; -. DR PATRIC; 22488358; VBIMesLot2464_7048. DR eggNOG; COG3702; -. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; MLOT266835:GJ9L-7005-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 102 AA; 11278 MW; 72246E006E87C026 CRC64; MADGRIDPGE PKLLITPLVK GLTRAPTVLG IPYELAGFIG VLTAVVFLAT HNLLMLCICV PLYAVARIAI MRDSMFIEIM FIRSRKTPPR SASFWGARSY RV // ID Q98P51_RHILO Unreviewed; 216 AA. AC Q98P51; DT 01-OCT-2001, integrated into UniProtKB/TrEMBL. DT 01-OCT-2001, sequence version 1. DT 14-MAY-2014, entry version 44. DE SubName: Full=Conjugal transfer protein TrbB; GN OrderedLocusNames=mll9611; OS Rhizobium loti (strain MAFF303099) (Mesorhizobium loti). OG Plasmid pMLb. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Phyllobacteriaceae; Mesorhizobium. OX NCBI_TaxID=266835; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MAFF303099; PLASMID=pMLb; RX PubMed=11214968; DOI=10.1093/dnares/7.6.331; RA Kaneko T., Nakamura Y., Sato S., Asamizu E., Kato T., Sasamoto S., RA Watanabe A., Idesawa K., Ishikawa A., Kawashima K., Kimura T., RA Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., RA Mochizuki Y., Nakayama S., Nakazaki N., Shimpo S., Sugimoto M., RA Takeuchi C., Yamada M., Tabata S.; RT "Complete genome structure of the nitrogen-fixing symbiotic bacterium RT Mesorhizobium loti."; RL DNA Res. 7:331-338(2000). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP003017; BAB54804.1; -; Genomic_DNA. DR RefSeq; NP_109465.1; NC_002682.1. DR STRING; 266835.mll9611; -. DR EnsemblBacteria; BAB54804; BAB54804; BAB54804. DR GeneID; 1224437; -. DR KEGG; mlo:mll9611; -. DR HOGENOM; HOG000274208; -. DR KO; K03198; -. DR OMA; RYERRLP; -. DR OrthoDB; EOG64BQ98; -. DR BioCyc; MLOT266835:GJ9L-7213-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 216 AA; 23853 MW; 79A6EDA8C87116F4 CRC64; MLKPPRSKQE KLHDPPAFAL PRQPGRGQRR NCRQPHGRSG RPCIGLLDAV GTAARKDPAV GRGPGLQDHG RHHHHRHRPD AGLRRQFGRL QTAHPDRFWS LDRLCGVEFL SVVLLVRRRG IDLMAAALEQ LDAVPGWTVP VHRALTEQIM LGGAPRGIAI LNGTLAGAVG LGLRLWLIGL LIWAVGHATA VWAARRDPLF FEVGRRHLRL PGHLSV // ID Q9A5M9_CAUCR Unreviewed; 94 AA. AC Q9A5M9; DT 01-JUN-2001, integrated into UniProtKB/TrEMBL. DT 01-JUN-2001, sequence version 1. DT 14-MAY-2014, entry version 49. DE SubName: Full=Type IV secretion system protein B3, putative; GN OrderedLocusNames=CC_2418; OS Caulobacter crescentus (strain ATCC 19089 / CB15). OC Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; OC Caulobacteraceae; Caulobacter. OX NCBI_TaxID=190650; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 19089 / CB15; RX PubMed=11259647; DOI=10.1073/pnas.061029298; RA Nierman W.C., Feldblyum T.V., Laub M.T., Paulsen I.T., Nelson K.E., RA Eisen J.A., Heidelberg J.F., Alley M.R.K., Ohta N., Maddock J.R., RA Potocka I., Nelson W.C., Newton A., Stephens C., Phadke N.D., Ely B., RA DeBoy R.T., Dodson R.J., Durkin A.S., Gwinn M.L., Haft D.H., RA Kolonay J.F., Smit J., Craven M.B., Khouri H.M., Shetty J., RA Berry K.J., Utterback T.R., Tran K., Wolf A.M., Vamathevan J.J., RA Ermolaeva M.D., White O., Salzberg S.L., Venter J.C., Shapiro L., RA Fraser C.M.; RT "Complete genome sequence of Caulobacter crescentus."; RL Proc. Natl. Acad. Sci. U.S.A. 98:4136-4141(2001). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AE005673; AAK24389.1; -; Genomic_DNA. DR PIR; A87549; A87549. DR RefSeq; NP_421221.1; NC_002696.2. DR DNASU; 943616; -. DR EnsemblBacteria; AAK24389; AAK24389; CC_2418. DR GeneID; 943616; -. DR KEGG; ccr:CC_2418; -. DR PATRIC; 21301868; VBICauCre124313_2436. DR HOGENOM; HOG000273006; -. DR KO; K03198; -. DR OMA; RFYHGAN; -. DR OrthoDB; EOG6N3CWS; -. DR BioCyc; CAULO:CC2418-MONOMER; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Reference proteome. SQ SEQUENCE 94 AA; 10558 MW; 442EFC2FDB9F4F52 CRC64; MSGPGSDPVF AALTRPQMVA GVTYSYAVFN LIVTMEAFLI SKSFWALLIA PLVHAVGYLG CLNEPRFFDL WITKVSRCPN IRNRGFWQAN SYRP // ID Q9AHH5_COMTE Unreviewed; 103 AA. AC Q9AHH5; DT 01-JUN-2001, integrated into UniProtKB/TrEMBL. DT 01-JUN-2001, sequence version 1. DT 13-NOV-2013, entry version 24. DE SubName: Full=Mating pair formation protein TrbD; GN Name=trbD; OS Comamonas testosteroni (Pseudomonas testosteroni). OG Plasmid pTSA. OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Comamonadaceae; Comamonas. OX NCBI_TaxID=285; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=T-2; PLASMID=pTSA; RX PubMed=11282598; DOI=10.1128/AEM.67.4.1508-1516.2001; RA Tralau T., Cook A.M., Ruff J.; RT "Map of the IncP1beta plasmid pTSA encoding the widespread genes (tsa) RT for p-toluenesulfonate degradation in Comamonas testosteroni T-2."; RL Appl. Environ. Microbiol. 67:1508-1516(2001). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=T-2; PLASMID=pTSA; RX PubMed=15176949; RA Mampel J., Maier E., Tralau T., Ruff J., Benz R., Cook A.M.; RT "A novel outer-membrane anion channel (porin) as part of a putatively RT two-component transport system for 4-toluenesulphonate in Comamonas RT testosteroni T-2."; RL Biochem. J. 383:91-99(2004). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AF311437; AAK38004.1; -; Genomic_DNA. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 103 AA; 11802 MW; 8F4CEDEE6B161847 CRC64; MALRAIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QEVRATVFGI ALWFGALFAL RLMAKADPKL RHVYLRHRRY KPYYPARSTP FRDNTPSQGK QYK // ID Q9EUF9_ECOLX Unreviewed; 105 AA. AC Q9EUF9; DT 01-MAR-2001, integrated into UniProtKB/TrEMBL. DT 01-MAR-2001, sequence version 1. DT 13-NOV-2013, entry version 16. DE SubName: Full=Pilx3 protein; GN Name=pilx3; OS Escherichia coli. OG Plasmid IncX plasmid R6K. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=562; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=IncX plasmid R6K; RA Nunez B.; RL Thesis (1998), Universidad de Cantabria, Departamento de Biologia RL Molecular. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AJ006342; CAC20140.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 105 AA; 12251 MW; A3A67FEB63168AA0 CRC64; MSTVFKGLTR PALIRGLGVP LYPFLAMCVL VVLLGVWIDD LMYFLILPGW FAIKRVTKID ERFFDLLYLR AVVKGHPLAN KRFSRPYIMR EASTMKLIYL KWTIL // ID Q9F245_AGGAC Unreviewed; 923 AA. AC Q9F245; DT 01-MAR-2001, integrated into UniProtKB/TrEMBL. DT 01-MAR-2001, sequence version 1. DT 14-MAY-2014, entry version 34. DE SubName: Full=ATPase; GN Name=magB03; OS Aggregatibacter actinomycetemcomitans (Actinobacillus OS actinomycetemcomitans) (Haemophilus actinomycetemcomitans). OG Plasmid pVT745. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; OC Pasteurellaceae; Aggregatibacter. OX NCBI_TaxID=714; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=VT745; PLASMID=pVT745; RX PubMed=11160089; DOI=10.1128/JB.183.5.1585-1594.2001; RA Galli D.M., Chen J., Novak K.F., Leblanc D.J.; RT "Nucleotide sequence and analysis of conjugative plasmid pVT745."; RL J. Bacteriol. 183:1585-1594(2001). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AF302424; AAG24434.1; -; Genomic_DNA. DR RefSeq; NP_067581.1; NC_002579.1. DR ProteinModelPortal; Q9F245; -. DR GeneID; 1243304; -. DR GO; GO:0005524; F:ATP binding; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 2. DR InterPro; IPR004346; CagE_TrbE_VirB. DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF03135; CagE_TrbE_VirB; 1. DR Pfam; PF05101; VirB3; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR TIGRFAMs; TIGR00929; VirB4_CagE; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 923 AA; 104496 MW; 840A12BA28DDB314 CRC64; MQADSENTIS GEPLFKGMIT QATISGIPIP IIFVIAFLSG LAYFISGKLY AVLPAIPLLI GTRLLYETDR DFLTLNMLNF KTNSGLGKIV RFFGSKTFTA QKYNRTAFSE NRIETLGIKL SEQKDYSKFI PYSSHIAPNV VITRNGDLVA TWCCKGVTFE TAENYELNLS KEKLNTLIQS FSKKGVSFYQ HNIRHKVNET LDGHFSSEFT QEVNDKYYAG FNNGTLQRNI LYITLVYTPY SKLEKISRKT TKLKDKKQEL AYQLETMQEM CSRLDKALED FRGEALTTFS KGGALYSEQL SFYNYLITNR WQPVRVTSTS FYHLLGNTDL HFGKETGQIT FNGESRFFRC LEIKDYTEET CEGFFDALMY INADYVITQS FQAMPSNVAK EKLDRQQKRL NSSNEAAISQ VDNLTVALDD LASGRLSFGY YHFGMMVYGD SIKDVTDKTN EIIAVLSSLG LIITLANTAL SASYFGQFPA NFAYRPRLAM LSSRNYASLT SLHNFASGKC NGNPWGDAVT LVKTPNAQPY YFNFHQSAPG VDDRGEKRLG NTAVFGQAGS GKTMLMTFLM TQLDKFRHTS TFLPTSVKRE LTMVYLDKDY GAEACIRAMG GKYMLIRKGV PTGFNPFMCE NTPENLSFLS TLMKMLVTRN GRTLSSLDEE ELFKAVKSVM EFDMEYRSYP ISRVVEHLPE GSTKAEKENS LARRLKNWAQ GGEFGWVFDN PADTLDFTGH AVFGIDGTEF LDDQDTCSPL SFYLLHRIGK LLDGRRLIIF MDEFWKWLKD EAFSDFAYNK LKVIRKEDGI VIPMTQSMDE VLKSPISRAV VEECETTICL PNPIARKVDY VDGFGISEKQ FEIIRELQPD SRTFLVRKGL ETALAKLDLS GLGRENLKIL STSKDNAEIL HQIIEEVGEA ANDWIPIYKQ RCV // ID Q9F524_ECOLX Unreviewed; 106 AA. AC Q9F524; DT 01-MAR-2001, integrated into UniProtKB/TrEMBL. DT 01-MAR-2001, sequence version 1. DT 14-MAY-2014, entry version 24. DE SubName: Full=TraD protein; GN Name=traD; OS Escherichia coli. OG Plasmid R721. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=562; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=K-12; PLASMID=R721; RX PubMed=1400257; RA Kim S., Komano T.; RT "Nucleotide sequence of the R721 shufflon."; RL J. Bacteriol. 174:7053-7058(1992). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=K-12; PLASMID=R721; RA Sampei G., Motomura K., Masuda S., Yamaguchi T., Ando K., Oishi T., RA Furuya N., Komano T., Mizobuchi K.; RT "Organization and diversification of plasmid genomes: complete RT nucleotide sequence of the R721 genome."; RL Submitted (JUN-2000) to the EMBL/GenBank/DDBJ databases. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP002527; BAB12656.1; -; Genomic_DNA. DR RefSeq; NP_065363.1; NC_002525.1. DR GeneID; 1238718; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 106 AA; 11913 MW; F9964E07CFD8E7A0 CRC64; MDKVNEHVSE SFMTYNGFNR PALVSGIPLM LLLFTAFFAV LTGFPAIFLW GMKGLIIPAI CALFLFIVKL ACENDPNALR VIRLNLMGLL LKIRHRDLII GYSSVR // ID Q9F5A0_AGRRH Unreviewed; 108 AA. AC Q9F5A0; DT 01-MAR-2001, integrated into UniProtKB/TrEMBL. DT 01-MAR-2001, sequence version 1. DT 14-MAY-2014, entry version 34. DE SubName: Full=Rcorf123; DE SubName: Full=Riorf155 protein; GN Name=riorf155; OS Agrobacterium rhizogenes. OG Plasmid pRi1724, and Plasmid pRi2659. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium. OX NCBI_TaxID=359; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MAFF03-01724; PLASMID=pRi1724; RA Moriguchi K., Nishida T., Maeda Y., Tanaka N., Yoshida K.; RT "Genome structure of Ri plasmid (1): Construction of linking library RT and physical map of pRi1724 in Japanese Agrobacterium."; RL Nucleic Acids Symp. Ser. 39:189-190(1998). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MAFF03-01724; PLASMID=pRi1724; RA Maeda Y., Moriguchi K., Kataoka M., Satou M., Satutui N.H.N., RA Tanaka N., Yoshida K.; RT "Genome structure of Ri plasmid (1): Sequencing analysis of T-DNA and RT its flanking regions of pRi1724 in Japanese Agrobacterium RT rhizogenes."; RL Nucleic Acids Symp. Ser. 42:67-68(1999). RN [3] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MAFF03-01724; PLASMID=pRi1724; RX PubMed=10907845; DOI=10.1093/dnares/7.3.157; RA Moriguchi K., Maeda Y., Satou M., Kataoka M., Tanaka N., Yoshida K.; RT "Analysis of unique variable region of a plant root inducing plasmid, RT pRi1724, by the construction of its physical map and library."; RL DNA Res. 7:157-163(2000). RN [4] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MAFF03-01724; PLASMID=pRi1724; RX PubMed=11273700; DOI=10.1006/jmbi.2001.4488; RA Moriguchi K., Maeda Y., Satou M., Hardayani N.S.N., Kataoka M., RA Tanaka N., Yoshida K.; RT "The complete nucleotide sequence of a plant root-inducing (Ri) RT plasmid indicates its chimeric structure and evolutionary relationship RT between tumor-inducing (Ti) and symbiotic (Sym) plasmids in RT Rhizobiaceae."; RL J. Mol. Biol. 307:771-784(2001). RN [5] RP NUCLEOTIDE SEQUENCE. RC STRAIN=K599; PLASMID=pRi2659; RA Mankin S.L., Hill D.S., Olhoft P.M., Toren E., Wenck A.R., Nea L., RA Xing L., Brown J.A., Fu H., Ireland L., Jia H., Hillebrand H., RA Jones T., Song H.-S.; RT "Disarming and sequencing of Agrobacterium rhizogenes strain K599 RT (NCPPB2659) plasmid pRi2659."; RL In Vitro Cell. Dev. Biol. Plant 0:0-0(2007). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; EU186381; ABW33680.1; -; Genomic_DNA. DR EMBL; AP002086; BAB16274.1; -; Genomic_DNA. DR RefSeq; NP_066736.1; NC_002575.1. DR RefSeq; YP_001961098.1; NC_010841.1. DR GeneID; 6383383; -. DR GeneID; 874731; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 108 AA; 11601 MW; 72371DA01036CD72 CRC64; MNADLEEATL YLAATRPALF FGVPLTLAGV FMMLAGFLIV VVQNPLYEIV LLPLWLGARL IVERDYNAAS VVLLFLQTAG RSVDGHAWGG ASVSPNPIRV ASRGRGMT // ID Q9F5C4_AGRRH Unreviewed; 99 AA. AC Q9F5C4; DT 01-MAR-2001, integrated into UniProtKB/TrEMBL. DT 01-MAR-2001, sequence version 1. DT 14-MAY-2014, entry version 32. DE SubName: Full=Riorf128 protein; GN Name=riorf128; OS Agrobacterium rhizogenes. OG Plasmid pRi1724. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium. OX NCBI_TaxID=359; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MAFF03-01724; PLASMID=pRi1724; RA Moriguchi K., Nishida T., Maeda Y., Tanaka N., Yoshida K.; RT "Genome structure of Ri plasmid (1): Construction of linking library RT and physical map of pRi1724 in Japanese Agrobacterium."; RL Nucleic Acids Symp. Ser. 39:189-190(1998). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MAFF03-01724; PLASMID=pRi1724; RA Maeda Y., Moriguchi K., Kataoka M., Satou M., Satutui N.H.N., RA Tanaka N., Yoshida K.; RT "Genome structure of Ri plasmid (1): Sequencing analysis of T-DNA and RT its flanking regions of pRi1724 in Japanese Agrobacterium RT rhizogenes."; RL Nucleic Acids Symp. Ser. 42:67-68(1999). RN [3] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MAFF03-01724; PLASMID=pRi1724; RX PubMed=10907845; DOI=10.1093/dnares/7.3.157; RA Moriguchi K., Maeda Y., Satou M., Kataoka M., Tanaka N., Yoshida K.; RT "Analysis of unique variable region of a plant root inducing plasmid, RT pRi1724, by the construction of its physical map and library."; RL DNA Res. 7:157-163(2000). RN [4] RP NUCLEOTIDE SEQUENCE. RC STRAIN=MAFF03-01724; PLASMID=pRi1724; RX PubMed=11273700; DOI=10.1006/jmbi.2001.4488; RA Moriguchi K., Maeda Y., Satou M., Hardayani N.S.N., Kataoka M., RA Tanaka N., Yoshida K.; RT "The complete nucleotide sequence of a plant root-inducing (Ri) RT plasmid indicates its chimeric structure and evolutionary relationship RT between tumor-inducing (Ti) and symbiotic (Sym) plasmids in RT Rhizobiaceae."; RL J. Mol. Biol. 307:771-784(2001). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AP002086; BAB16247.1; -; Genomic_DNA. DR RefSeq; NP_066709.1; NC_002575.1. DR GeneID; 874685; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 99 AA; 11382 MW; D3D7F6921472524B CRC64; MAKSLSGLHR NRIHRALSRP NLLMGADREL VLLTGLAAVI LIFVVLTVYS ALFGVAVWVM IVGLLRMMAK SDPFMRQVYI RHISYKPYYK ATTSPWRRY // ID Q9PBT5_XYLFA Unreviewed; 106 AA. AC Q9PBT5; DT 01-OCT-2000, integrated into UniProtKB/TrEMBL. DT 01-OCT-2000, sequence version 1. DT 14-MAY-2014, entry version 57. DE SubName: Full=Conjugal transfer protein; GN OrderedLocusNames=XF_2054; OS Xylella fastidiosa (strain 9a5c). OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xylella. OX NCBI_TaxID=160492; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=9a5c; RX PubMed=10910347; DOI=10.1038/35018003; RA Simpson A.J., Reinach F.C., Arruda P., Abreu F.A., Acencio M., RA Alvarenga R., Alves L.M., Araya J.E., Baia G.S., Baptista C.S., RA Barros M.H., Bonaccorsi E.D., Bordin S., Bove J.M., Briones M.R., RA Bueno M.R., Camargo A.A., Camargo L.E., Carraro D.M., Carrer H., RA Colauto N.B., Colombo C., Costa F.F., Costa M.C., Costa-Neto C.M., RA Coutinho L.L., Cristofani M., Dias-Neto E., Docena C., El-Dorry H., RA Facincani A.P., Ferreira A.J., Ferreira V.C., Ferro J.A., Fraga J.S., RA Franca S.C., Franco M.C., Frohme M., Furlan L.R., Garnier M., RA Goldman G.H., Goldman M.H., Gomes S.L., Gruber A., Ho P.L., RA Hoheisel J.D., Junqueira M.L., Kemper E.L., Kitajima J.P., RA Krieger J.E., Kuramae E.E., Laigret F., Lambais M.R., Leite L.C., RA Lemos E.G., Lemos M.V., Lopes S.A., Lopes C.R., Machado J.A., RA Machado M.A., Madeira A.M., Madeira H.M., Marino C.L., Marques M.V., RA Martins E.A., Martins E.M., Matsukuma A.Y., Menck C.F., Miracca E.C., RA Miyaki C.Y., Monteriro-Vitorello C.B., Moon D.H., Nagai M.A., RA Nascimento A.L., Netto L.E., Nhani A.Jr., Nobrega F.G., Nunes L.R., RA Oliveira M.A., de Oliveira M.C., de Oliveira R.C., Palmieri D.A., RA Paris A., Peixoto B.R., Pereira G.A., Pereira H.A.Jr., Pesquero J.B., RA Quaggio R.B., Roberto P.G., Rodrigues V., de M Rosa A.J., RA de Rosa V.E.Jr., de Sa R.G., Santelli R.V., Sawasaki H.E., RA da Silva A.C., da Silva A.M., da Silva F.R., da Silva W.A.Jr., RA da Silveira J.F., Silvestri M.L., Siqueira W.J., de Souza A.A., RA de Souza A.P., Terenzi M.F., Truffi D., Tsai S.M., Tsuhako M.H., RA Vallada H., Van Sluys M.A., Verjovski-Almeida S., Vettore A.L., RA Zago M.A., Zatz M., Meidanis J., Setubal J.C.; RT "The genome sequence of the plant pathogen Xylella fastidiosa."; RL Nature 406:151-159(2000). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AE003849; AAF84854.1; -; Genomic_DNA. DR PIR; E82605; E82605. DR RefSeq; NP_299334.1; NC_002488.3. DR STRING; 160492.XF2054; -. DR EnsemblBacteria; AAF84854; AAF84854; XF_2054. DR GeneID; 1127605; -. DR KEGG; xfa:XF2054; -. DR PATRIC; 24134345; VBIXylFas578_2195. DR KO; K03198; -. DR OMA; LRMMAKS; -. DR OrthoDB; EOG6N6849; -. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 4: Predicted; KW Complete proteome. SQ SEQUENCE 106 AA; 12435 MW; FF2D5BDB7F00FE9B CRC64; MALRTIPIRR VGNRDNLFMG GDREMVMFSG LLCAVLIFVA QDWIAAGFGL GMWFLALWLF RKLAKADPRI RFVYMRNRRY KAYYPPRATP FRNNTASQGN QYKCFK // ID Q9PHJ9_XYLFA Unreviewed; 122 AA. AC Q9PHJ9; DT 01-OCT-2000, integrated into UniProtKB/TrEMBL. DT 01-OCT-2000, sequence version 1. DT 14-MAY-2014, entry version 54. DE SubName: Full=Conjugal transfer protein; GN OrderedLocusNames=XF_a0006; OS Xylella fastidiosa (strain 9a5c). OG Plasmid pXF51. OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; OC Xanthomonadaceae; Xylella. OX NCBI_TaxID=160492; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=9a5c; PLASMID=pXF51; RX PubMed=10910347; DOI=10.1038/35018003; RA Simpson A.J., Reinach F.C., Arruda P., Abreu F.A., Acencio M., RA Alvarenga R., Alves L.M., Araya J.E., Baia G.S., Baptista C.S., RA Barros M.H., Bonaccorsi E.D., Bordin S., Bove J.M., Briones M.R., RA Bueno M.R., Camargo A.A., Camargo L.E., Carraro D.M., Carrer H., RA Colauto N.B., Colombo C., Costa F.F., Costa M.C., Costa-Neto C.M., RA Coutinho L.L., Cristofani M., Dias-Neto E., Docena C., El-Dorry H., RA Facincani A.P., Ferreira A.J., Ferreira V.C., Ferro J.A., Fraga J.S., RA Franca S.C., Franco M.C., Frohme M., Furlan L.R., Garnier M., RA Goldman G.H., Goldman M.H., Gomes S.L., Gruber A., Ho P.L., RA Hoheisel J.D., Junqueira M.L., Kemper E.L., Kitajima J.P., RA Krieger J.E., Kuramae E.E., Laigret F., Lambais M.R., Leite L.C., RA Lemos E.G., Lemos M.V., Lopes S.A., Lopes C.R., Machado J.A., RA Machado M.A., Madeira A.M., Madeira H.M., Marino C.L., Marques M.V., RA Martins E.A., Martins E.M., Matsukuma A.Y., Menck C.F., Miracca E.C., RA Miyaki C.Y., Monteriro-Vitorello C.B., Moon D.H., Nagai M.A., RA Nascimento A.L., Netto L.E., Nhani A.Jr., Nobrega F.G., Nunes L.R., RA Oliveira M.A., de Oliveira M.C., de Oliveira R.C., Palmieri D.A., RA Paris A., Peixoto B.R., Pereira G.A., Pereira H.A.Jr., Pesquero J.B., RA Quaggio R.B., Roberto P.G., Rodrigues V., de M Rosa A.J., RA de Rosa V.E.Jr., de Sa R.G., Santelli R.V., Sawasaki H.E., RA da Silva A.C., da Silva A.M., da Silva F.R., da Silva W.A.Jr., RA da Silveira J.F., Silvestri M.L., Siqueira W.J., de Souza A.A., RA de Souza A.P., Terenzi M.F., Truffi D., Tsai S.M., Tsuhako M.H., RA Vallada H., Van Sluys M.A., Verjovski-Almeida S., Vettore A.L., RA Zago M.A., Zatz M., Meidanis J., Setubal J.C.; RT "The genome sequence of the plant pathogen Xylella fastidiosa."; RL Nature 406:151-159(2000). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AE003851; AAF85575.1; -; Genomic_DNA. DR PIR; F82861; F82861. DR RefSeq; NP_061662.1; NC_002490.1. DR STRING; 160492.XFa0006; -. DR EnsemblBacteria; AAF85575; AAF85575; XF_a0006. DR GeneID; 1125451; -. DR KEGG; xfa:XFa0006; -. DR PATRIC; 24135905; VBIXylFas578_2959. DR KO; K03198; -. DR OMA; ANDPKIF; -. DR OrthoDB; EOG6VMTNS; -. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Complete proteome; Plasmid. SQ SEQUENCE 122 AA; 13932 MW; 946F8FE86D7A9AE2 CRC64; MSNSTQDVYT DPLFVGLTRP ASILGIPYEA CVAEFMAMGL IFLSVNNPLY LALALPMHAV LYLISANDPK IFSSIHMWLK TNGRCRNFLF WRASSFSPLA TKKLEKVRLL TRIVKYFRVR EN // ID Q9R2G3_RHIRD Unreviewed; 108 AA. AC Q9R2G3; DT 01-MAY-2000, integrated into UniProtKB/TrEMBL. DT 01-MAY-2000, sequence version 1. DT 03-APR-2013, entry version 20. DE SubName: Full=VIRB3=VIRULENCE protein; OS Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium OS radiobacter). OG Plasmid. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=358; RN [1] RP NUCLEOTIDE SEQUENCE. RX PubMed=8405938; DOI=10.1016/0378-1097(93)90395-I; RA Shirasu K., Kado C.I.; RT "Membrane location of the Ti plasmid VirB proteins involved in the RT biosynthesis of a pilin-like conjugative structure on Agrobacterium RT tumefaciens."; RL FEMS Microbiol. Lett. 111:287-294(1993). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 108 AA; 11760 MW; 06616D618D722BD4 CRC64; MNDRLEEATL YLAATRPALF LGVPLTLAGL FMMFAGFVIV IVQNPLYEVV LAPLWFGARL VVERDYNAAS VILLFLRTAG RSIDSAVWGG ATVSPNPIRV PPRGRGMV // ID Q9R2I0_9ZZZZ Unreviewed; 98 AA. AC Q9R2I0; DT 01-MAY-2000, integrated into UniProtKB/TrEMBL. DT 01-MAY-2000, sequence version 1. DT 13-NOV-2013, entry version 22. DE SubName: Full=Putative TrbD; GN Name=orf9; OS Plasmid pM3. OG Plasmid pM3. OC other sequences; plasmids. OX NCBI_TaxID=94177; RN [1] RP NUCLEOTIDE SEQUENCE. RC PLASMID=pM3; RX PubMed=10974112; RA Greated A., Titok M., Krasowiak R., Fairclough R.J., Thomas C.M.; RT "The replication and stable-inheritance functions of IncP-9 plasmid RT pM3."; RL Microbiology 146:2249-2258(2000). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AF078924; AAD46130.1; -; Genomic_DNA. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; KW Plasmid. SQ SEQUENCE 98 AA; 10948 MW; B5EE8D4DDBE83D3E CRC64; MAEYDDLEEG EVLVLAMARP SMVGPFTLSS ILISLIAPVL LALLIRSLYP LGLIPVLFVI SYWICSKDVY LFGVLQAASN LKASRLRKLW GYRSYAPR // ID Q9RLS2_LEGPN Unreviewed; 93 AA. AC Q9RLS2; E1XZY7; DT 01-MAY-2000, integrated into UniProtKB/TrEMBL. DT 01-MAY-2000, sequence version 1. DT 26-JUN-2013, entry version 34. DE SubName: Full=LvhB3 protein; DE SubName: Full=Putative type IV secretion protein B3; GN Name=lvhB3; OS Legionella pneumophila. OC Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; OC Legionellaceae; Legionella. OX NCBI_TaxID=446; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=Philadelphia-1; RX PubMed=10564519; DOI=10.1046/j.1365-2958.1999.01642.x; RA Segal G., Russo J.J., Shuman H.A.; RT "Relationships between a new type IV secretion system and the icm/dot RT virulence system of Legionella pneumophila."; RL Mol. Microbiol. 34:799-809(1999). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=AA100; RX PubMed=11923356; DOI=10.1128/JCM.40.4.1352-1362.2002; RA Samrakandi M.M., Cirillo S.L., Ridenour D.A., Bermudez L.E., RA Cirillo J.D.; RT "Genetic and phenotypic differences between Legionella pneumophila RT strains."; RL J. Clin. Microbiol. 40:1352-1362(2002). CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AF410854; AAM08239.1; -; Genomic_DNA. DR EMBL; Y19029; CAB60052.1; -; Genomic_DNA. DR TCDB; 3.A.7.5.1; the type iv (conjugal dna-protein transfer or virb) secretory pathway (ivsp) family. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 4: Predicted; SQ SEQUENCE 93 AA; 10739 MW; E87FA01A1A918D01 CRC64; MSDLEISPIF NALTRPAMTA GVTFEYHMLN LIVSMCAFIG FSPLYGLIFI PLHVFGWLVC RYDTHFFTIC AKRFLLPEAP NTSLWRVRAY EPF // ID TRBD_RHIRD Reviewed; 99 AA. AC P54909; DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot. DT 01-OCT-1996, sequence version 1. DT 14-MAY-2014, entry version 47. DE RecName: Full=Conjugal transfer protein TrbD; GN Name=trbD; OS Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium OS radiobacter). OG Plasmid pTiA6NC. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=358; RN [1] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA]. RX PubMed=8763954; RA Alt-Morbe J., Stryker J.L., Fuqua C., Li P.L., Farrand S.K., RA Winans S.C.; RT "The conjugal transfer system of Agrobacterium tumefaciens octopine- RT type Ti plasmids is closely related to the transfer system of an IncP RT plasmid and distantly related to Ti plasmid vir genes."; RL J. Bacteriol. 178:4248-4257(1996). CC -!- SUBCELLULAR LOCATION: Cell membrane; Single-pass membrane protein CC (Potential). CC -!- SIMILARITY: Belongs to the TrbD family. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AF242881; AAB95096.1; -; Genomic_DNA. DR RefSeq; NP_059758.1; NC_002377.1. DR GeneID; 1224277; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. DR GO; GO:0000746; P:conjugation; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 3: Inferred from homology; KW Cell membrane; Conjugation; Membrane; Plasmid; Transmembrane; KW Transmembrane helix. FT CHAIN 1 99 Conjugal transfer protein TrbD. FT /FTId=PRO_0000065611. FT TRANSMEM 40 60 Helical; (Potential). SQ SEQUENCE 99 AA; 11248 MW; F220008821CCC9EA CRC64; MAESGSALVR SRVHRALSRP NLLMGADREL VLLTALAAII LIFVVLTWYA ALFGIAIWLI VVGALRTMAK ADPLMRRVYI RHISYKNFYR ATSSPWRKF // ID TRBD_RHISN Reviewed; 99 AA. AC P55397; DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot. DT 01-NOV-1997, sequence version 1. DT 14-MAY-2014, entry version 66. DE RecName: Full=Probable conjugal transfer protein TrbD; GN Name=trbD; OrderedLocusNames=NGR_a04190; ORFNames=y4cO; OS Rhizobium sp. (strain NGR234). OG Plasmid sym pNGR234a. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. OX NCBI_TaxID=394; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NGR234; RX PubMed=9163424; DOI=10.1038/387394a0; RA Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., RA Perret X.; RT "Molecular basis of symbiosis between Rhizobium and legumes."; RL Nature 387:394-401(1997). RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=NGR234; RX PubMed=19376903; DOI=10.1128/AEM.00515-09; RA Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., RA Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., RA Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., RA Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.; RT "Rhizobium sp. strain NGR234 possesses a remarkable number of RT secretion systems."; RL Appl. Environ. Microbiol. 75:4035-4045(2009). CC -!- SUBCELLULAR LOCATION: Cell membrane; Multi-pass membrane protein CC (Potential). CC -!- SIMILARITY: Belongs to the TrbD family. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; U00090; AAB92430.1; -; Genomic_DNA. DR RefSeq; NP_443807.1; NC_000914.2. DR STRING; 394.NGR_a04190; -. DR EnsemblBacteria; AAB92430; AAB92430; NGR_a04190. DR GeneID; 962269; -. DR KEGG; rhi:NGR_a04190; -. DR PATRIC; 32301609; VBIRhiSp122450_0440. DR eggNOG; COG5268; -. DR HOGENOM; HOG000289425; -. DR KO; K03198; -. DR OMA; LRMMAKS; -. DR OrthoDB; EOG6N6849; -. DR BioCyc; SFRE394:GBYN-6470-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. DR GO; GO:0000746; P:conjugation; IEA:UniProtKB-KW. DR InterPro; IPR016704; Conjugal_tfr_TrbD. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. DR PIRSF; PIRSF017854; T4SS_TrbD; 1. PE 3: Inferred from homology; KW Cell membrane; Complete proteome; Conjugation; Membrane; Plasmid; KW Transmembrane; Transmembrane helix. FT CHAIN 1 99 Probable conjugal transfer protein TrbD. FT /FTId=PRO_0000065612. FT TRANSMEM 21 41 Helical; (Potential). FT TRANSMEM 42 62 Helical; (Potential). SQ SEQUENCE 99 AA; 11470 MW; D7429E9BB5D536D3 CRC64; MAEALSERYR NRIHRALSRP NLLMGADREL VLITGLAAVI LIFVVLTVYS ALFGVVVWIV IVGLLRMMAK SDPLMRQVYV RHISYKPYYK ATTSPWRRY // ID VIRB3_AGRT5 Reviewed; 108 AA. AC P17793; DT 01-AUG-1990, integrated into UniProtKB/Swiss-Prot. DT 27-MAR-2002, sequence version 3. DT 14-MAY-2014, entry version 85. DE RecName: Full=Protein virB3; GN Name=virB3; OrderedLocusNames=Atu6169; ORFNames=AGR_pTi_bx137; OS Agrobacterium tumefaciens (strain C58 / ATCC 33970). OG Plasmid pTiC58. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=176299; RN [1] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA]. RX PubMed=2370849; DOI=10.1007/BF00261729; RA Kuldau G.A., de Vos G., Owen J., McCaffrey G., Zambryski P.; RT "The virB operon of Agrobacterium tumefaciens pTiC58 encodes 11 open RT reading frames."; RL Mol. Gen. Genet. 221:256-266(1990). RN [2] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA]. RX PubMed=2194232; DOI=10.1016/0147-619X(90)90028-B; RA Rogowsky P.M., Powell B.S., Shirasu K., Lin T.-S., Morel P., RA Zyprian E.M., Steck T.R., Kado C.I.; RT "Molecular characterization of the vir regulon of Agrobacterium RT tumefaciens: complete nucleotide sequence and gene organization of the RT 28.63-kbp regulon cloned as a single unit."; RL Plasmid 23:85-106(1990). RN [3] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA]. RX PubMed=2233252; DOI=10.1111/j.1365-2958.1990.tb00690.x; RA Shirasu K., Morel P., Kado C.I.; RT "Characterization of the virB operon of an Agrobacterium tumefaciens RT Ti plasmid: nucleotide sequence and protein analysis."; RL Mol. Microbiol. 4:1153-1163(1990). RN [4] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=11743193; DOI=10.1126/science.1066804; RA Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., RA Okura V.K., Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., RA Chen Y., Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., RA Chapman P., Clendenning J., Deatherage G., Gillet W., Grant C., RA Kutyavin T., Levy R., Li M.-J., McClelland E., Palmieri A., RA Raymond C., Rouse G., Saenphimmachak C., Wu Z., Romero P., Gordon D., RA Zhang S., Yoo H., Tao Y., Biddle P., Jung M., Krespan W., Perry M., RA Gordon-Kamm B., Liao L., Kim S., Hendrick C., Zhao Z.-Y., Dolan M., RA Chumley F., Tingey S.V., Tomb J.-F., Gordon M.P., Olson M.V., RA Nester E.W.; RT "The genome of the natural genetic engineer Agrobacterium tumefaciens RT C58."; RL Science 294:2317-2323(2001). RN [5] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=C58 / ATCC 33970; RX PubMed=11743194; DOI=10.1126/science.1066803; RA Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., RA Qurollo B., Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., RA Houmiel K., Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., RA Wollam C., Allinger M., Doughty D., Scott C., Lappas C., Markelz B., RA Flanagan C., Crowell C., Gurson J., Lomo C., Sear C., Strub G., RA Cielo C., Slater S.; RT "Genome sequence of the plant pathogen and biotechnology agent RT Agrobacterium tumefaciens C58."; RL Science 294:2323-2328(2001). CC -!- FUNCTION: VirB proteins are suggested to act at the bacterial CC surface and there play an important role in directing T-DNA CC transfer to plant cells. CC -!- SUBCELLULAR LOCATION: Membrane; Single-pass membrane protein CC (Potential). CC -!- SIMILARITY: Belongs to the virB3 family. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; X53264; CAA37356.1; -; Genomic_DNA. DR EMBL; J03320; AAA91593.1; -; Genomic_DNA. DR EMBL; AE007871; AAK90930.1; -; Genomic_DNA. DR PIR; AG3248; AG3248. DR PIR; S12343; B3AG58. DR RefSeq; NP_396489.1; NC_003065.3. DR ProteinModelPortal; P17793; -. DR STRING; 176299.Atu6169; -. DR EnsemblBacteria; AAK90930; AAK90930; Atu6169. DR GeneID; 1137492; -. DR KEGG; atu:Atu6169; -. DR PATRIC; 20820542; VBIAgrTum91616_5365. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; RDYNAAS; -. DR OrthoDB; EOG6HJ293; -. DR BioCyc; AGRO:ATU6169-MONOMER; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR GO; GO:0043684; C:type IV secretion system complex; IGC:PAMGO_GAT. DR GO; GO:0030255; P:protein secretion by the type IV secretion system; IGC:PAMGO_GAT. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 3: Inferred from homology; KW Complete proteome; Crown gall tumor; Membrane; Plasmid; KW Reference proteome; Transmembrane; Transmembrane helix. FT CHAIN 1 108 Protein virB3. FT /FTId=PRO_0000065837. FT TRANSMEM 22 42 Helical; (Potential). FT CONFLICT 71 71 V -> L (in Ref. 1; CAA37356). FT CONFLICT 92 93 SV -> TL (in Ref. 1; CAA37356). SQ SEQUENCE 108 AA; 11596 MW; 476D3CF9947E73EF CRC64; MNDRLEEATL YLAATRPALF LGVPLTLAGL LVMFAGFVIV IVQNPLYEVV LVPLWFGARL VVERDYNAAS VVLLFLQTAG RSVDGLIWGG ASVSPNPIKV PARGRGMA // ID VIRB3_AGRT9 Reviewed; 108 AA. AC P0A3V9; P05352; DT 15-MAR-2005, integrated into UniProtKB/Swiss-Prot. DT 15-MAR-2005, sequence version 1. DT 14-MAY-2014, entry version 28. DE RecName: Full=Protein virB3; GN Name=virB3; OS Agrobacterium tumefaciens (strain 15955). OG Plasmid pTi15955. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=190386; RN [1] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA]. RX PubMed=2837739; DOI=10.1093/nar/16.10.4621; RA Thompson D.V., Melchers L.S., Idler K.B., Shilperoort R.A., RA Hooykaas P.J.J.; RT "Analysis of the complete nucleotide sequence of the Agrobacterium RT tumefaciens virB operon."; RL Nucleic Acids Res. 16:4621-4636(1988). CC -!- FUNCTION: VirB proteins are suggested to act at the bacterial CC surface and there play an important role in directing T-DNA CC transfer to plant cells. CC -!- SUBCELLULAR LOCATION: Membrane; Single-pass membrane protein CC (Potential). CC -!- SIMILARITY: Belongs to the virB3 family. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; X06826; CAA29974.1; -; Genomic_DNA. DR PIR; S00779; B3AG55. DR RefSeq; NP_059801.1; NC_002377.1. DR GeneID; 1224320; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 3: Inferred from homology; KW Crown gall tumor; Membrane; Plasmid; Transmembrane; KW Transmembrane helix. FT CHAIN 1 108 Protein virB3. FT /FTId=PRO_0000065838. FT TRANSMEM 22 42 Helical; (Potential). SQ SEQUENCE 108 AA; 11760 MW; 3D0CCCB19ECA105D CRC64; MNDRLEEATL YLAATRPALF LGVPLTLAGL FMMFAGFVIV IVQNPLYEVV LAPLWFGARL IVERDYNAAS VVLLFLRTAG RSIDSAVWGG ATVSPNPIRV PPRGRGMV // ID VIRB3_BARHE Reviewed; 103 AA. AC Q9S3N1; Q9RND3; DT 23-JAN-2007, integrated into UniProtKB/Swiss-Prot. DT 01-MAY-2000, sequence version 1. DT 14-MAY-2014, entry version 61. DE RecName: Full=Type IV secretion system protein virB3; GN Name=virB3; OrderedLocusNames=BH13270; OS Bartonella henselae (strain ATCC 49882 / Houston 1) (Rochalimaea OS henselae). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=283166; RN [1] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA]. RC STRAIN=ATCC 49882 / Houston 1; RX PubMed=10749166; DOI=10.1089/104454900314528; RA Schmiederer M., Anderson B.E.; RT "Cloning, sequencing, and expression of three Bartonella henselae RT genes homologous to the Agrobacterium tumefaciens VirB region."; RL DNA Cell Biol. 19:141-147(2000). RN [2] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA]. RC STRAIN=ATCC 49882 / Houston 1; RX PubMed=10882236; DOI=10.1089/10445490050043344; RA Padmalayam I., Karem K., Baumstark B.R., Massung R.; RT "The gene encoding the 17-kDa antigen of Bartonella henselae is RT located within a cluster of genes homologous to the virB virulence RT operon."; RL DNA Cell Biol. 19:377-382(2000). RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 49882 / Houston 1; RX PubMed=15210978; DOI=10.1073/pnas.0305659101; RA Alsmark U.C.M., Frank A.C., Karlberg E.O., Legault B.-A., Ardell D.H., RA Canbaeck B., Eriksson A.-S., Naeslund A.K., Handley S.A., Huvet M., RA La Scola B., Holmberg M., Andersson S.G.E.; RT "The louse-borne human pathogen Bartonella quintana is a genomic RT derivative of the zoonotic agent Bartonella henselae."; RL Proc. Natl. Acad. Sci. U.S.A. 101:9716-9721(2004). RN [4] RP INDUCTION. RC STRAIN=ATCC 49882 / Houston 1; RX PubMed=11553594; DOI=10.1128/IAI.69.10.6495-6502.2001; RA Schmiederer M., Arcenas R., Widen R., Valkov N., Anderson B.E.; RT "Intracellular induction of the Bartonella henselae virB operon by RT human endothelial cells."; RL Infect. Immun. 69:6495-6502(2001). RN [5] RP INTERACTION WITH 17 KDA ANTIGEN PROTEIN. RX PubMed=15231811; DOI=10.1128/JB.186.14.4796-4801.2004; RA Shamaei-Tousi A., Cahill R., Frankel G.; RT "Interaction between protein subunits of the type IV secretion system RT of Bartonella henselae."; RL J. Bacteriol. 186:4796-4801(2004). RN [6] RP FUNCTION. RC STRAIN=ATCC 49882 / Houston 1; RX PubMed=15049812; DOI=10.1111/j.1365-2958.2003.03964.x; RA Schmid M.C., Schulein R., Dehio M., Denecker G., Carena I., Dehio C.; RT "The VirB type IV secretion system of Bartonella henselae mediates RT invasion, proinflammatory activation and antiapoptotic protection of RT endothelial cells."; RL Mol. Microbiol. 52:81-92(2004). RN [7] RP FUNCTION. RC STRAIN=ATCC 49882 / Houston 1; RX PubMed=15642951; DOI=10.1073/pnas.0406796102; RA Schulein R., Guye P., Rhomberg T.A., Schmid M.C., Schroeder G., RA Vergunst A.C., Carena I., Dehio C.; RT "A bipartite signal mediates the transfer of type IV secretion RT substrates of Bartonella henselae into human cells."; RL Proc. Natl. Acad. Sci. U.S.A. 102:856-861(2005). CC -!- FUNCTION: The type IV secretion system VirB/VirD4 is a major CC virulence determinant for subversion of human endothelial cell CC (HEC) function. VirB-dependent changes of HEC include massive CC cytoskeletal rearrangements, a proinflammatory activation by CC nuclear factor NF-kappa-B, inhibition of early and late events of CC apoptosis, leading to an increased cell survival, and, at high CC infection doses, a cytostatic or cytotoxic effect, which interfers CC with a potent VirB-independent mitogenic activity. These changes CC of HEC require the T4S coupling protein VirD4 and at least one of CC the effector proteins BepA-G. VirB3 may play a role in CC stabilization of pilus structure. CC -!- SUBUNIT: Interacts with the 17 kDa antigen protein that is encoded CC within the virB locus. CC -!- SUBCELLULAR LOCATION: Cell outer membrane; Single-pass membrane CC protein (Potential). CC -!- INDUCTION: During the interaction with the intracellular CC environment of host cells. CC -!- SIMILARITY: Belongs to the virB3 family. CC -!- SEQUENCE CAUTION: CC Sequence=AAF00941.1; Type=Frameshift; Positions=10; CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; U23447; AAD48920.1; -; Genomic_DNA. DR EMBL; AF182718; AAF00941.1; ALT_FRAME; Genomic_DNA. DR EMBL; BX897699; CAF28100.1; -; Genomic_DNA. DR RefSeq; YP_034052.1; NC_005956.1. DR STRING; 283166.BH13270; -. DR EnsemblBacteria; CAF28100; CAF28100; BH13270. DR GeneID; 2865826; -. DR KEGG; bhe:BH13270; -. DR PATRIC; 20546655; VBIBarHen29080_1447. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; HDHNMFR; -. DR OrthoDB; EOG6VMTNS; -. DR BioCyc; BHEN283166:GIVZ-1322-MONOMER; -. DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR GO; GO:0009405; P:pathogenesis; IEA:UniProtKB-KW. DR GO; GO:0006810; P:transport; IEA:UniProtKB-KW. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 1: Evidence at protein level; KW Cell outer membrane; Complete proteome; Membrane; Transmembrane; KW Transmembrane helix; Transport; Virulence. FT CHAIN 1 103 Type IV secretion system protein virB3. FT /FTId=PRO_0000273256. FT TRANSMEM 33 53 Helical; (Potential). SQ SEQUENCE 103 AA; 11705 MW; BB142F76828E052C CRC64; MNEDPLFLAC TRPAMFAGVT MEAMAFNVMA TSILFILTSG FTMIGLGIGL HFVLREITKH DHNQFRVLFA WLNTRGKQKN LNRWGGGSTS PLRLIRTYEE LNR // ID VIRB3_BARQU Reviewed; 103 AA. AC Q6FYW8; Q4L2R0; Q8KQC2; DT 20-MAR-2007, integrated into UniProtKB/Swiss-Prot. DT 19-JUL-2004, sequence version 1. DT 14-MAY-2014, entry version 52. DE RecName: Full=Type IV secretion system protein virB3; GN Name=virB3; OrderedLocusNames=BQ10540; OS Bartonella quintana (strain Toulouse) (Rochalimaea quintana). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bartonellaceae; Bartonella. OX NCBI_TaxID=283165; RN [1] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA]. RC STRAIN=Toulouse; RA Alsmark U.C.M., Frank A.C., Thollesson M., Andersson S.G.E.; RT "Evolution of type IV secretion systems in Bartonella: horizontal RT transmission and gene conversion."; RL Submitted (JUN-2002) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA]. RC STRAIN=ATCC VR-358 / Fuller / CIP 107027; RA Kohlhorst D.E., Soni T., Baumstark B.R.; RT "Genes composing the virB operon of Bartonella quintana."; RL Submitted (JAN-2003) to the EMBL/GenBank/DDBJ databases. RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND POSSIBLE FUNCTION. RC STRAIN=Toulouse; RX PubMed=15210978; DOI=10.1073/pnas.0305659101; RA Alsmark U.C.M., Frank A.C., Karlberg E.O., Legault B.-A., Ardell D.H., RA Canbaeck B., Eriksson A.-S., Naeslund A.K., Handley S.A., Huvet M., RA La Scola B., Holmberg M., Andersson S.G.E.; RT "The louse-borne human pathogen Bartonella quintana is a genomic RT derivative of the zoonotic agent Bartonella henselae."; RL Proc. Natl. Acad. Sci. U.S.A. 101:9716-9721(2004). CC -!- FUNCTION: Component of the type IV secretion system VirB/VirD4 CC which could be a major virulence determinant for subversion of CC human endothelial cell (HEC) function. VirB3 may play a role in CC stabilization of pilus structure. CC -!- SUBUNIT: Interacts with the 17 kDa antigen protein that is encoded CC within the VirB locus (By similarity). CC -!- SUBCELLULAR LOCATION: Cell outer membrane; Single-pass membrane CC protein (Potential). CC -!- SIMILARITY: Belongs to the virB3 family. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AY122055; AAM82236.1; -; Genomic_DNA. DR EMBL; AY216720; AAM43799.2; -; Genomic_DNA. DR EMBL; BX897700; CAF26521.1; -; Genomic_DNA. DR RefSeq; YP_032621.1; NC_005955.1. DR STRING; 283165.BQ10540; -. DR EnsemblBacteria; CAF26521; CAF26521; BQ10540. DR GeneID; 2866936; -. DR KEGG; bqu:BQ10540; -. DR PATRIC; 31953475; VBIBarQui58630_1142. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; HDHNMFR; -. DR OrthoDB; EOG6VMTNS; -. DR BioCyc; BQUI283165:GHZA-1052-MONOMER; -. DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR GO; GO:0009405; P:pathogenesis; IEA:UniProtKB-KW. DR GO; GO:0006810; P:transport; IEA:UniProtKB-KW. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 3: Inferred from homology; KW Cell outer membrane; Complete proteome; Membrane; Transmembrane; KW Transmembrane helix; Transport; Virulence. FT CHAIN 1 103 Type IV secretion system protein virB3. FT /FTId=PRO_0000281410. FT TRANSMEM 33 53 Helical; (Potential). FT VARIANT 103 103 R -> RCQL (in strain: ATCC VR-358 / FT Fuller / CIP 107027). SQ SEQUENCE 103 AA; 11686 MW; ABE71B216FEDEA09 CRC64; MNEDTLFLAC TRPATFAGVT MEGMALNVMA TSILFILTSN FTMIGLGIGL HFVLREVTKY DHNQFRVLFA WLNTRGKQKN LTRWGGGSTS PLRLIRTYKE LNR // ID VIRB3_BRUA2 Reviewed; 116 AA. AC Q2YIT7; Q57A16; Q7BMZ8; DT 12-JUN-2007, integrated into UniProtKB/Swiss-Prot. DT 07-FEB-2006, sequence version 1. DT 14-MAY-2014, entry version 46. DE RecName: Full=Type IV secretion system protein virB3; GN Name=virB3; OrderedLocusNames=BAB2_0066; OS Brucella abortus (strain 2308). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=359391; RN [1] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], TRANSCRIPTION, AND FUNCTION. RX PubMed=10940027; DOI=10.1128/JB.182.17.4849-4855.2000; RA Sieira R., Comerci D.J., Sanchez D.O., Ugalde R.A.; RT "A homologue of an operon required for DNA transfer in Agrobacterium RT is required in Brucella abortus for virulence and intracellular RT multiplication."; RL J. Bacteriol. 182:4849-4855(2000). RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=2308; RX PubMed=16299333; DOI=10.1128/IAI.73.12.8353-8361.2005; RA Chain P.S., Comerci D.J., Tolmasky M.E., Larimer F.W., Malfatti S.A., RA Vergez L.M., Aguero F., Land M.L., Ugalde R.A., Garcia E.; RT "Whole-genome analyses of speciation events in pathogenic Brucellae."; RL Infect. Immun. 73:8353-8361(2005). CC -!- FUNCTION: The virB operon is essential for intracellular survival CC and is not involved in the invasion process. Constitutes a major CC determinant of virulence in mice. CC -!- SUBCELLULAR LOCATION: Cell membrane; Multi-pass membrane protein CC (Potential). CC -!- MISCELLANEOUS: Transcription is turned on at the beginning of the CC stationary phase of vegetative growth. CC -!- SIMILARITY: Belongs to the virB3 family. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AF226278; AAF73896.1; -; Genomic_DNA. DR EMBL; AM040265; CAJ12232.1; -; Genomic_DNA. DR RefSeq; YP_418311.1; NC_007624.1. DR ProteinModelPortal; Q2YIT7; -. DR STRING; 359391.BAB2_0066; -. DR EnsemblBacteria; CAJ12232; CAJ12232; BAB2_0066. DR GeneID; 3827980; -. DR KEGG; bmf:BAB2_0066; -. DR PATRIC; 17847617; VBIBruMel86222_2342. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; FWGASSY; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BABO359391:GKDV-2309-MONOMER; -. DR BioCyc; BMEL359391:GJOQ-2309-MONOMER; -. DR PRO; PR:Q2YIT7; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. DR GO; GO:0009405; P:pathogenesis; IEA:UniProtKB-KW. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 3: Inferred from homology; KW Cell membrane; Complete proteome; Membrane; Transmembrane; KW Transmembrane helix; Virulence. FT CHAIN 1 116 Type IV secretion system protein virB3. FT /FTId=PRO_0000290172. FT TRANSMEM 23 43 Helical; (Potential). FT TRANSMEM 45 65 Helical; (Potential). SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID VIRB3_BRUAB Reviewed; 116 AA. AC P0C526; Q57A16; Q7BMZ8; DT 12-JUN-2007, integrated into UniProtKB/Swiss-Prot. DT 12-JUN-2007, sequence version 1. DT 14-MAY-2014, entry version 36. DE RecName: Full=Type IV secretion system protein virB3; GN Name=virB3; OrderedLocusNames=BruAb2_0067; OS Brucella abortus biovar 1 (strain 9-941). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=262698; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=9-941; RX PubMed=15805518; DOI=10.1128/JB.187.8.2715-2726.2005; RA Halling S.M., Peterson-Burch B.D., Bricker B.J., Zuerner R.L., RA Qing Z., Li L.-L., Kapur V., Alt D.P., Olsen S.C.; RT "Completion of the genome sequence of Brucella abortus and comparison RT to the highly similar genomes of Brucella melitensis and Brucella RT suis."; RL J. Bacteriol. 187:2715-2726(2005). CC -!- SUBCELLULAR LOCATION: Cell membrane; Multi-pass membrane protein CC (Potential). CC -!- SIMILARITY: Belongs to the virB3 family. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AE017224; AAX75518.1; -; Genomic_DNA. DR RefSeq; YP_222879.1; NC_006933.1. DR ProteinModelPortal; P0C526; -. DR STRING; 262698.BruAb2_0067; -. DR EnsemblBacteria; AAX75518; AAX75518; BruAb2_0067. DR GeneID; 3341695; -. DR KEGG; bmb:BruAb2_0067; -. DR PATRIC; 17826325; VBIBruAbo15061_2348. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; FWGASSY; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BABO262698:GJC2-2276-MONOMER; -. DR PRO; PR:P0C526; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. DR GO; GO:0009405; P:pathogenesis; IEA:UniProtKB-KW. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 3: Inferred from homology; KW Cell membrane; Complete proteome; Membrane; Transmembrane; KW Transmembrane helix; Virulence. FT CHAIN 1 116 Type IV secretion system protein virB3. FT /FTId=PRO_0000290173. FT TRANSMEM 23 43 Helical; (Potential). FT TRANSMEM 45 65 Helical; (Potential). SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID VIRB3_BRUME Reviewed; 116 AA. AC Q9RPY2; DT 12-JUN-2007, integrated into UniProtKB/Swiss-Prot. DT 01-MAY-2000, sequence version 1. DT 14-MAY-2014, entry version 65. DE RecName: Full=Type IV secretion system protein virB3; GN Name=virB3; OrderedLocusNames=BMEII0027; OS Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=224914; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=16M / ATCC 23456 / NCTC 10094; RX PubMed=11756688; DOI=10.1073/pnas.221575398; RA DelVecchio V.G., Kapatral V., Redkar R.J., Patra G., Mujer C., Los T., RA Ivanova N., Anderson I., Bhattacharyya A., Lykidis A., Reznik G., RA Jablonski L., Larsen N., D'Souza M., Bernal A., Mazur M., Goltsman E., RA Selkov E., Elzer P.H., Hagius S., O'Callaghan D., Letesson J.-J., RA Haselkorn R., Kyrpides N.C., Overbeek R.; RT "The genome sequence of the facultative intracellular pathogen RT Brucella melitensis."; RL Proc. Natl. Acad. Sci. U.S.A. 99:443-448(2002). CC -!- SUBCELLULAR LOCATION: Cell membrane; Multi-pass membrane protein CC (Potential). CC -!- SIMILARITY: Belongs to the virB3 family. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AE008918; AAL53268.1; -; Genomic_DNA. DR PIR; AI3512; AI3512. DR RefSeq; NP_541004.1; NC_003318.1. DR ProteinModelPortal; Q9RPY2; -. DR STRING; 224914.BMEII0027; -. DR EnsemblBacteria; AAL53268; AAL53268; BMEII0027. DR GeneID; 1197798; -. DR KEGG; bme:BMEII0027; -. DR PATRIC; 17854639; VBIBruMel92729_2302. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; WASIAEV; -. DR OrthoDB; EOG68WR8V; -. DR BioCyc; BMEL224914:GCJ0-2134-MONOMER; -. DR PRO; PR:Q9RPY2; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. DR GO; GO:0009405; P:pathogenesis; IEA:UniProtKB-KW. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 3: Inferred from homology; KW Cell membrane; Complete proteome; Membrane; Transmembrane; KW Transmembrane helix; Virulence. FT CHAIN 1 116 Type IV secretion system protein virB3. FT /FTId=PRO_0000290174. FT TRANSMEM 23 43 Helical; (Potential). FT TRANSMEM 45 65 Helical; (Potential). SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID VIRB3_BRUSU Reviewed; 116 AA. AC Q7CEG1; G0KER5; Q7BQL6; DT 12-JUN-2007, integrated into UniProtKB/Swiss-Prot. DT 05-JUL-2004, sequence version 1. DT 14-MAY-2014, entry version 60. DE RecName: Full=Type IV secretion system protein virB3; GN Name=virB3; OrderedLocusNames=BRA0067, BS1330_II0067; OS Brucella suis biovar 1 (strain 1330). OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Brucellaceae; Brucella. OX NCBI_TaxID=204722; RN [1] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA]. RC STRAIN=1330; RX PubMed=10510235; DOI=10.1046/j.1365-2958.1999.01569.x; RA O'Callaghan D., Cazevieille C., Allardet-Servent A., Boschiroli M.L., RA Bourg G., Foulongne V., Frutos P., Kulakov Y., Ramuz M.; RT "A homologue of the Agrobacterium tumefaciens VirB and Bordetella RT pertussis Ptl type IV secretion systems is essential for intracellular RT survival of Brucella suis."; RL Mol. Microbiol. 33:1210-1220(1999). RN [2] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND EXPRESSION CONDITIONS. RC STRAIN=1330; RX PubMed=11830669; DOI=10.1073/pnas.032514299; RA Boschiroli M.L., Ouahrani-Bettache S., Foulongne V., RA Michaux-Charachon S., Bourg G., Allardet-Servent A., Cazevieille C., RA Liautard J.P., Ramuz M., O'Callaghan D.; RT "The Brucella suis virB operon is induced intracellularly in RT macrophages."; RL Proc. Natl. Acad. Sci. U.S.A. 99:1544-1549(2002). RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=1330; RX PubMed=12271122; DOI=10.1073/pnas.192319099; RA Paulsen I.T., Seshadri R., Nelson K.E., Eisen J.A., Heidelberg J.F., RA Read T.D., Dodson R.J., Umayam L.A., Brinkac L.M., Beanan M.J., RA Daugherty S.C., DeBoy R.T., Durkin A.S., Kolonay J.F., Madupu R., RA Nelson W.C., Ayodeji B., Kraul M., Shetty J., Malek J.A., RA Van Aken S.E., Riedmuller S., Tettelin H., Gill S.R., White O., RA Salzberg S.L., Hoover D.L., Lindler L.E., Halling S.M., Boyle S.M., RA Fraser C.M.; RT "The Brucella suis genome reveals fundamental similarities between RT animal and plant pathogens and symbionts."; RL Proc. Natl. Acad. Sci. U.S.A. 99:13148-13153(2002). RN [4] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=1330; RX PubMed=22038969; DOI=10.1128/JB.06181-11; RA Tae H., Shallom S., Settlage R., Preston D., Adams L.G., Garner H.R.; RT "Revised genome sequence of Brucella suis 1330."; RL J. Bacteriol. 193:6410-6410(2011). CC -!- FUNCTION: The VirB system could be required for the establishment CC of the replication niche in the host. CC -!- SUBCELLULAR LOCATION: Cell membrane; Multi-pass membrane protein CC (Potential). CC -!- INDUCTION: Specifically induced within macrophages by phagosome CC acidification. Induced at 37 degrees Celsius in minimal medium, CC suggesting that nutritional stress is a regulating signal. CC -!- MISCELLANEOUS: Transcription of the operon is maximal in early CC exponential phase. CC -!- SIMILARITY: Belongs to the virB3 family. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; AF141604; AAD56613.1; -; Genomic_DNA. DR EMBL; AE014292; AAN33279.1; -; Genomic_DNA. DR EMBL; CP002998; AEM19559.1; -; Genomic_DNA. DR RefSeq; NP_699274.1; NC_004311.2. DR RefSeq; YP_005613785.1; NC_017250.1. DR ProteinModelPortal; Q7CEG1; -. DR STRING; 204722.BRA0067; -. DR EnsemblBacteria; AAN33279; AAN33279; BRA0067. DR EnsemblBacteria; AEM19559; AEM19559; BS1330_II0067. DR GeneID; 1164504; -. DR GeneID; 12139501; -. DR KEGG; bms:BRA0067; -. DR KEGG; bsi:BS1330_II0067; -. DR PATRIC; 17792935; VBIBruSui107850_2286. DR eggNOG; COG3702; -. DR HOGENOM; HOG000119151; -. DR KO; K03198; -. DR OMA; FWGASSY; -. DR OrthoDB; EOG68WR8V; -. DR PRO; PR:Q7CEG1; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. DR GO; GO:0009405; P:pathogenesis; IEA:UniProtKB-KW. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 2: Evidence at transcript level; KW Cell membrane; Complete proteome; Membrane; Transmembrane; KW Transmembrane helix; Virulence. FT CHAIN 1 116 Type IV secretion system protein virB3. FT /FTId=PRO_0000290175. FT TRANSMEM 23 43 Helical; (Potential). FT TRANSMEM 45 65 Helical; (Potential). SQ SEQUENCE 116 AA; 13082 MW; 1FBAAC743EAFBDD9 CRC64; MTTAPQESNA RSAGYRGDPI FKGCTRPAML FGVPVIPLVI VGGSIVLLSV WISMFILPLI VPIVLVMRQI TQTDDQMFRL LGLKAQFRLI HFNRTGRFWR ASAYSPIAFT KRKRES // ID VIRB3_RHIRD Reviewed; 108 AA. AC P0A3V8; P05352; DT 15-MAR-2005, integrated into UniProtKB/Swiss-Prot. DT 15-MAR-2005, sequence version 1. DT 14-MAY-2014, entry version 33. DE RecName: Full=Protein virB3; GN Name=virB3; OS Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium OS radiobacter). OG Plasmid pTiA6. OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; OC Agrobacterium tumefaciens complex. OX NCBI_TaxID=358; RN [1] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA]. RX PubMed=3281947; RA Ward J.E., Akiyoshi D.E., Regier D., Datta A., Gordon M.P., RA Nester E.W.; RT "Characterization of the virB operon from an Agrobacterium tumefaciens RT Ti plasmid."; RL J. Biol. Chem. 263:5804-5814(1988). CC -!- FUNCTION: VirB proteins are suggested to act at the bacterial CC surface and there play an important role in directing T-DNA CC transfer to plant cells. CC -!- SUBCELLULAR LOCATION: Membrane; Single-pass membrane protein CC (Potential). CC -!- SIMILARITY: Belongs to the virB3 family. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; J03216; AAA88647.1; -; Genomic_DNA. DR PIR; S00779; B3AG55. DR RefSeq; NP_059801.1; NC_002377.1. DR TCDB; 3.A.7.1.1; the type iv (conjugal dna-protein transfer or virb) secretory pathway (ivsp) family. DR GeneID; 1224320; -. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR InterPro; IPR007792; T4SS_VirB3/TrbD/AvhB. DR Pfam; PF05101; VirB3; 1. PE 3: Inferred from homology; KW Crown gall tumor; Membrane; Plasmid; Transmembrane; KW Transmembrane helix. FT CHAIN 1 108 Protein virB3. FT /FTId=PRO_0000065839. FT TRANSMEM 22 42 Helical; (Potential). SQ SEQUENCE 108 AA; 11760 MW; 3D0CCCB19ECA105D CRC64; MNDRLEEATL YLAATRPALF LGVPLTLAGL FMMFAGFVIV IVQNPLYEVV LAPLWFGARL IVERDYNAAS VVLLFLRTAG RSIDSAVWGG ATVSPNPIRV PPRGRGMV //