Database and Motifs High-scoring Motif Occurences Debugging Information Results in TSV Format Results in GFF3 Format



FIMO - Motif search tool

FIMO version 5.5.1, (Release date: Sun Jan 29 10:33:12 2023 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme/doc/fimo-output-format.html.
To get a copy of the FIMO software please access https://meme-suite.org

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE intergenic_500.fasta
Database contains 500 sequences, 50000 residues

MOTIFS meme_out/meme.txt (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
MAAARAAG 8 AAAAAAAG
CTTTTTY 7 CTTTTTT
GCTCCCGC 8 GCTCCCGC
TGGAGGAR 8 TGGAGGAA

Random model letter frequencies (--nrdb--):
A 0.275 C 0.225 G 0.225 T 0.275


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
TGGAGGAR MEME-4 intergenic_385 + 32 39 1.21e-05 0.355 TGGAGGAG
TGGAGGAR MEME-4 intergenic_324 - 84 91 1.21e-05 0.355 TGGAGGAG
MAAARAAG MEME-1 intergenic_28 + 19 26 2.65e-05 0.215 AAAAAAAG
MAAARAAG MEME-1 intergenic_427 + 27 34 2.65e-05 0.215 AAAAAAAG
MAAARAAG MEME-1 intergenic_395 + 28 35 2.65e-05 0.215 AAAAAAAG
MAAARAAG MEME-1 intergenic_340 - 32 39 2.65e-05 0.215 AAAAAAAG
MAAARAAG MEME-1 intergenic_427 - 54 61 2.65e-05 0.215 AAAAAAAG
MAAARAAG MEME-1 intergenic_176 + 74 81 2.65e-05 0.215 AAAAAAAG
MAAARAAG MEME-1 intergenic_236 - 75 82 2.65e-05 0.215 AAAAAAAG
MAAARAAG MEME-1 intergenic_250 + 85 92 2.65e-05 0.215 AAAAAAAG
MAAARAAG MEME-1 intergenic_198 - 82 89 2.65e-05 0.215 AAAAAAAG
TGGAGGAR MEME-4 intergenic_3 + 1 8 2.67e-05 0.355 TGGAGGAA
TGGAGGAR MEME-4 intergenic_45 - 6 13 2.67e-05 0.355 TGGAGGAA
TGGAGGAR MEME-4 intergenic_62 + 35 42 2.67e-05 0.355 TGGAGGAA
TGGAGGAR MEME-4 intergenic_102 + 86 93 2.67e-05 0.355 TGGAGGAA
TGGAGGAR MEME-4 intergenic_143 - 82 89 2.67e-05 0.355 TGGAGGAA
MAAARAAG MEME-1 intergenic_93 + 6 13 4.83e-05 0.215 AAAAGAAG
MAAARAAG MEME-1 intergenic_369 + 9 16 4.83e-05 0.215 AAAAGAAG
MAAARAAG MEME-1 intergenic_177 - 15 22 4.83e-05 0.215 AAAAGAAG
MAAARAAG MEME-1 intergenic_28 + 22 29 4.83e-05 0.215 AAAAGAAG
MAAARAAG MEME-1 intergenic_217 - 16 23 4.83e-05 0.215 AAAAGAAG
MAAARAAG MEME-1 intergenic_234 + 34 41 4.83e-05 0.215 AAAAGAAG
MAAARAAG MEME-1 intergenic_13 - 37 44 4.83e-05 0.215 AAAAGAAG
MAAARAAG MEME-1 intergenic_476 + 53 60 4.83e-05 0.215 AAAAGAAG
MAAARAAG MEME-1 intergenic_338 + 61 68 4.83e-05 0.215 AAAAGAAG
MAAARAAG MEME-1 intergenic_238 + 87 94 4.83e-05 0.215 AAAAGAAG
TGGAGGAR MEME-4 intergenic_105 - 31 38 6.07e-05 0.513 TGGGGGAA
TGGAGGAR MEME-4 intergenic_458 + 78 85 6.07e-05 0.513 TGGAGCAG
TGGAGGAR MEME-4 intergenic_291 + 83 90 6.07e-05 0.513 TGGGGGAA
TGGAGGAR MEME-4 intergenic_60 - 84 91 6.07e-05 0.513 TGGAGCAG
MAAARAAG MEME-1 intergenic_489 - 16 23 7e-05 0.215 CAAAAAAG
MAAARAAG MEME-1 intergenic_251 - 29 36 7e-05 0.215 CAAAAAAG
MAAARAAG MEME-1 intergenic_111 - 31 38 7e-05 0.215 CAAAAAAG
MAAARAAG MEME-1 intergenic_159 - 37 44 7e-05 0.215 CAAAAAAG
MAAARAAG MEME-1 intergenic_397 + 60 67 7e-05 0.215 CAAAAAAG
MAAARAAG MEME-1 intergenic_284 - 55 62 7e-05 0.215 CAAAAAAG
MAAARAAG MEME-1 intergenic_265 + 74 81 7e-05 0.215 CAAAAAAG
MAAARAAG MEME-1 intergenic_314 - 84 91 7e-05 0.215 CAAAAAAG
TGGAGGAR MEME-4 intergenic_492 - 62 69 8.53e-05 0.549 TGGGGCAG
MAAARAAG MEME-1 intergenic_455 + 10 17 8.79e-05 0.215 CAAAGAAG
MAAARAAG MEME-1 intergenic_30 + 40 47 8.79e-05 0.215 CAAAGAAG
MAAARAAG MEME-1 intergenic_377 + 48 55 8.79e-05 0.215 CAAAGAAG
MAAARAAG MEME-1 intergenic_334 - 53 60 8.79e-05 0.215 CAAAGAAG
MAAARAAG MEME-1 intergenic_441 + 83 90 8.79e-05 0.215 CAAAGAAG
MAAARAAG MEME-1 intergenic_318 + 85 92 8.79e-05 0.215 CAAAGAAG
MAAARAAG MEME-1 intergenic_411 - 79 86 8.79e-05 0.215 CAAAGAAG
MAAARAAG MEME-1 intergenic_295 + 89 96 8.79e-05 0.215 CAAAGAAG
CTTTTTY MEME-2 intergenic_42 + 4 10 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_217 + 9 15 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_63 - 9 15 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_489 + 16 22 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_466 + 17 23 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_177 + 18 24 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_7 + 19 25 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_338 - 18 24 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_270 - 19 25 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_486 + 25 31 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_28 - 20 26 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_159 + 28 34 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_251 + 29 35 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_111 + 31 37 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_340 + 32 38 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_427 - 28 34 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_395 - 29 35 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_159 + 37 43 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_253 + 40 46 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_108 - 38 44 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_120 + 51 57 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_177 + 52 58 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_427 + 54 60 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_284 + 55 61 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_17 + 55 61 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_366 + 57 63 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_299 + 65 71 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_302 - 60 66 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_397 - 61 67 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_107 + 75 81 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_236 + 75 81 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_193 - 75 81 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_176 - 75 81 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_265 - 75 81 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_198 + 82 88 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_314 + 84 90 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_251 + 86 92 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_347 - 81 87 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_481 - 83 89 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_250 - 86 92 9.66e-05 0.212 CTTTTTT
CTTTTTY MEME-2 intergenic_397 + 92 98 9.66e-05 0.212 CTTTTTT
TGGAGGAR MEME-4 intergenic_194 - 54 61 9.74e-05 0.549 AGGAGGAG
TGGAGGAR MEME-4 intergenic_261 - 72 79 9.74e-05 0.549 AGGAGGAG
TGGAGGAR MEME-4 intergenic_324 - 81 88 9.74e-05 0.549 AGGAGGAG
TGGAGGAR MEME-4 intergenic_52 - 91 98 9.74e-05 0.549 AGGAGGAG
TGGAGGAR MEME-4 intergenic_104 + 56 63 0.000109 0.549 TGGGGCAA
MAAARAAG MEME-1 intergenic_494 + 6 13 0.00011 0.215 AAAAAGAG
MAAARAAG MEME-1 intergenic_458 - 18 25 0.00011 0.215 AAAAAGAG
MAAARAAG MEME-1 intergenic_361 + 59 66 0.00011 0.215 AAAAAGAG
MAAARAAG MEME-1 intergenic_271 + 65 72 0.00011 0.215 AAAAAGAG
MAAARAAG MEME-1 intergenic_23 + 71 78 0.00011 0.215 AAAAAGAG
MAAARAAG MEME-1 intergenic_397 + 76 83 0.00011 0.215 AAAAAGAG
MAAARAAG MEME-1 intergenic_408 - 71 78 0.00011 0.215 AAAAAGAG
MAAARAAG MEME-1 intergenic_302 + 80 87 0.00011 0.215 AAAAAGAG
MAAARAAG MEME-1 intergenic_481 + 84 91 0.00011 0.215 AAAAAGAG
MAAARAAG MEME-1 intergenic_225 - 87 94 0.00011 0.215 AAAAAGAG
MAAARAAG MEME-1 intergenic_397 - 90 97 0.00011 0.215 AAAAAGAG
TGGAGGAR MEME-4 intergenic_420 - 62 69 0.000124 0.549 AGGAGGAA
TGGAGGAR MEME-4 intergenic_358 + 69 76 0.000124 0.549 AGGAGGAA
TGGAGGAR MEME-4 intergenic_281 - 77 84 0.000124 0.549 AGGAGGAA
TGGAGGAR MEME-4 intergenic_287 + 85 92 0.000124 0.549 AGGAGGAA
MAAARAAG MEME-1 intergenic_496 + 4 11 0.000128 0.225 AAAAGGAG
MAAARAAG MEME-1 intergenic_175 + 10 17 0.000128 0.225 AAAAGGAG
MAAARAAG MEME-1 intergenic_404 - 59 66 0.000128 0.225 AAAAGGAG
MAAARAAG MEME-1 intergenic_420 - 65 72 0.000128 0.225 AAAAGGAG
MAAARAAG MEME-1 intergenic_287 + 82 89 0.000128 0.225 AAAAGGAG
TGGAGGAR MEME-4 intergenic_82 - 77 84 0.000134 0.566 AGGGGGAG
MAAARAAG MEME-1 intergenic_452 - 65 72 0.000145 0.252 CAAAAGAG
TGGAGGAR MEME-4 intergenic_396 - 55 62 0.000158 0.639 AGGAGCAG
MAAARAAG MEME-1 intergenic_46 - 30 37 0.00016 0.254 CAAAGGAG
TGGAGGAR MEME-4 intergenic_175 + 13 20 0.000173 0.642 AGGAGCAA
TGGAGGAR MEME-4 intergenic_92 - 16 23 0.000173 0.642 AGGAGCAA
CTTTTTY MEME-2 intergenic_158 + 6 12 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_453 + 6 12 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_422 + 8 14 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_315 - 5 11 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_369 - 7 13 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_106 - 12 18 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_458 + 20 26 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_78 + 21 27 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_108 - 17 23 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_346 + 26 32 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_222 + 33 39 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_234 - 32 38 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_466 - 33 39 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_399 + 39 45 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_485 - 37 43 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_101 - 47 53 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_46 - 47 53 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_22 - 56 62 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_269 + 66 72 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_314 - 65 71 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_279 - 80 86 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_225 + 89 95 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_15 + 89 95 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_281 + 90 96 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_455 + 90 96 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_103 - 87 93 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_235 - 91 97 0.000176 0.23 CTTTTTC
CTTTTTY MEME-2 intergenic_112 - 94 100 0.000176 0.23 CTTTTTC
MAAARAAG MEME-1 intergenic_63 + 8 15 0.000182 0.254 GAAAAAAG
MAAARAAG MEME-1 intergenic_42 - 4 11 0.000182 0.254 GAAAAAAG
MAAARAAG MEME-1 intergenic_217 - 9 16 0.000182 0.254 GAAAAAAG
MAAARAAG MEME-1 intergenic_270 + 18 25 0.000182 0.254 GAAAAAAG
MAAARAAG MEME-1 intergenic_253 - 40 47 0.000182 0.254 GAAAAAAG
MAAARAAG MEME-1 intergenic_120 - 51 58 0.000182 0.254 GAAAAAAG
MAAARAAG MEME-1 intergenic_17 - 55 62 0.000182 0.254 GAAAAAAG
MAAARAAG MEME-1 intergenic_299 - 65 72 0.000182 0.254 GAAAAAAG
MAAARAAG MEME-1 intergenic_347 + 80 87 0.000182 0.254 GAAAAAAG
MAAARAAG MEME-1 intergenic_397 - 92 99 0.000182 0.254 GAAAAAAG
TGGAGGAR MEME-4 intergenic_428 + 21 28 0.000183 0.653 AGGGGCAG
MAAARAAG MEME-1 intergenic_222 + 11 18 0.000204 0.254 AAAGAAAG
MAAARAAG MEME-1 intergenic_370 - 17 24 0.000204 0.254 AAAGAAAG
MAAARAAG MEME-1 intergenic_456 + 83 90 0.000204 0.254 AAAGAAAG
MAAARAAG MEME-1 intergenic_282 - 89 96 0.000204 0.254 AAAGAAAG
MAAARAAG MEME-1 intergenic_282 - 93 100 0.000204 0.254 AAAGAAAG
TGGAGGAR MEME-4 intergenic_286 + 33 40 0.000221 0.664 TGGAGGAC
TGGAGGAR MEME-4 intergenic_113 - 32 39 0.000221 0.664 TGGAGGAC
TGGAGGAR MEME-4 intergenic_152 - 34 41 0.000221 0.664 TGGAGGAC
TGGAGGAR MEME-4 intergenic_394 + 48 55 0.000221 0.664 TGGAGGAT
TGGAGGAR MEME-4 intergenic_407 + 77 84 0.000221 0.664 TGGAGGAT
GCTCCCGC MEME-3 intergenic_44 - 1 8 0.000225 1 GCTCTCGC
GCTCCCGC MEME-3 intergenic_210 + 9 16 0.000225 1 GCTTCCGC
GCTCCCGC MEME-3 intergenic_249 - 3 10 0.000225 1 GCTCTCGC
GCTCCCGC MEME-3 intergenic_298 + 15 22 0.000225 1 GCTCCTGC
GCTCCCGC MEME-3 intergenic_11 - 42 49 0.000225 1 GCTGCCGC
GCTCCCGC MEME-3 intergenic_490 - 71 78 0.000225 1 GCTCCTGC
GCTCCCGC MEME-3 intergenic_428 - 75 82 0.000225 1 GCTCCCGT
GCTCCCGC MEME-3 intergenic_248 - 78 85 0.000225 1 GCTCCCTC
GCTCCCGC MEME-3 intergenic_60 + 86 93 0.000225 1 GCTCCAGC
GCTCCCGC MEME-3 intergenic_75 + 90 97 0.000225 1 GCTCCTGC
MAAARAAG MEME-1 intergenic_42 - 3 10 0.000225 0.254 AAAAAAGG
MAAARAAG MEME-1 intergenic_338 + 18 25 0.000225 0.254 AAAAAAGG
MAAARAAG MEME-1 intergenic_111 - 30 37 0.000225 0.254 AAAAAAGG
MAAARAAG MEME-1 intergenic_253 - 39 46 0.000225 0.254 AAAAAAGG
MAAARAAG MEME-1 intergenic_177 - 51 58 0.000225 0.254 AAAAAAGG
MAAARAAG MEME-1 intergenic_302 + 60 67 0.000225 0.254 AAAAAAGG
MAAARAAG MEME-1 intergenic_284 - 54 61 0.000225 0.254 AAAAAAGG
MAAARAAG MEME-1 intergenic_366 - 56 63 0.000225 0.254 AAAAAAGG
MAAARAAG MEME-1 intergenic_299 - 64 71 0.000225 0.254 AAAAAAGG
MAAARAAG MEME-1 intergenic_265 + 75 82 0.000225 0.254 AAAAAAGG
MAAARAAG MEME-1 intergenic_193 + 75 82 0.000225 0.254 AAAAAAGG
MAAARAAG MEME-1 intergenic_347 + 81 88 0.000225 0.254 AAAAAAGG
MAAARAAG MEME-1 intergenic_129 + 31 38 0.000243 0.261 GAAAGAAG
MAAARAAG MEME-1 intergenic_412 + 55 62 0.000243 0.261 GAAAGAAG
MAAARAAG MEME-1 intergenic_54 + 65 72 0.000243 0.261 GAAAGAAG
MAAARAAG MEME-1 intergenic_267 + 92 99 0.000243 0.261 GAAAGAAG
TGGAGGAR MEME-4 intergenic_45 - 9 16 0.000243 0.672 TGGTGGAG
TGGAGGAR MEME-4 intergenic_374 + 62 69 0.000243 0.672 TGGTGGAG
CTTTTTY MEME-2 intergenic_492 - 6 12 0.000255 0.258 CTCTTTT
CTTTTTY MEME-2 intergenic_494 - 7 13 0.000255 0.258 CTCTTTT
CTTTTTY MEME-2 intergenic_458 + 18 24 0.000255 0.258 CTCTTTT
CTTTTTY MEME-2 intergenic_155 - 51 57 0.000255 0.258 CTCTTTT
CTTTTTY MEME-2 intergenic_245 - 55 61 0.000255 0.258 CTCTTTT
CTTTTTY MEME-2 intergenic_452 + 65 71 0.000255 0.258 CTCTTTT
CTTTTTY MEME-2 intergenic_361 - 60 66 0.000255 0.258 CTCTTTT
CTTTTTY MEME-2 intergenic_408 + 71 77 0.000255 0.258 CTCTTTT
CTTTTTY MEME-2 intergenic_271 - 66 72 0.000255 0.258 CTCTTTT
CTTTTTY MEME-2 intergenic_21 - 70 76 0.000255 0.258 CTCTTTT
CTTTTTY MEME-2 intergenic_188 - 72 78 0.000255 0.258 CTCTTTT
CTTTTTY MEME-2 intergenic_23 - 72 78 0.000255 0.258 CTCTTTT
CTTTTTY MEME-2 intergenic_394 + 81 87 0.000255 0.258 CTCTTTT
CTTTTTY MEME-2 intergenic_397 - 77 83 0.000255 0.258 CTCTTTT
CTTTTTY MEME-2 intergenic_302 - 81 87 0.000255 0.258 CTCTTTT
CTTTTTY MEME-2 intergenic_225 + 87 93 0.000255 0.258 CTCTTTT
CTTTTTY MEME-2 intergenic_337 + 89 95 0.000255 0.258 CTCTTTT
CTTTTTY MEME-2 intergenic_397 + 90 96 0.000255 0.258 CTCTTTT
CTTTTTY MEME-2 intergenic_481 - 85 91 0.000255 0.258 CTCTTTT
CTTTTTY MEME-2 intergenic_228 - 90 96 0.000255 0.258 CTCTTTT
MAAARAAG MEME-1 intergenic_22 + 67 74 0.000279 0.296 CAAGAAAG
MAAARAAG MEME-1 intergenic_492 + 6 13 0.000297 0.297 AAAAGAGG
MAAARAAG MEME-1 intergenic_458 - 17 24 0.000297 0.297 AAAAGAGG
MAAARAAG MEME-1 intergenic_21 + 70 77 0.000297 0.297 AAAAGAGG
MAAARAAG MEME-1 intergenic_228 + 90 97 0.000297 0.297 AAAAGAGG
MAAARAAG MEME-1 intergenic_225 - 86 93 0.000297 0.297 AAAAGAGG
MAAARAAG MEME-1 intergenic_496 + 2 9 0.000315 0.298 CAAAAAGG
MAAARAAG MEME-1 intergenic_365 - 13 20 0.000315 0.298 CAAAAAGG
MAAARAAG MEME-1 intergenic_282 - 43 50 0.000315 0.298 CAAAAAGG
MAAARAAG MEME-1 intergenic_404 - 61 68 0.000315 0.298 CAAAAAGG
MAAARAAG MEME-1 intergenic_287 + 80 87 0.000315 0.298 CAAAAAGG
TGGAGGAR MEME-4 intergenic_104 + 36 43 0.000319 0.672 TGGTGGAA
TGGAGGAR MEME-4 intergenic_85 + 40 47 0.000319 0.672 TGGTGGAA
TGGAGGAR MEME-4 intergenic_455 - 33 40 0.000319 0.672 TGGAGAAG
TGGAGGAR MEME-4 intergenic_415 + 53 60 0.000319 0.672 TGGAGAAG
TGGAGGAR MEME-4 intergenic_11 + 53 60 0.000319 0.672 TGGAGAAG
TGGAGGAR MEME-4 intergenic_343 + 53 60 0.000319 0.672 TGGTGGAA
TGGAGGAR MEME-4 intergenic_214 - 63 70 0.000319 0.672 TGGAGAAG
TGGAGGAR MEME-4 intergenic_357 + 82 89 0.000319 0.672 TGGCGGAA
TGGAGGAR MEME-4 intergenic_145 - 77 84 0.000319 0.672 TGGTGGAA
TGGAGGAR MEME-4 intergenic_195 + 87 94 0.000319 0.672 TGGCGGAA
CTTTTTY MEME-2 intergenic_366 - 3 9 0.00032 0.278 CTCTTTC
CTTTTTY MEME-2 intergenic_435 - 14 20 0.00032 0.278 CTCTTTC
CTTTTTY MEME-2 intergenic_53 - 19 25 0.00032 0.278 CTCTTTC
CTTTTTY MEME-2 intergenic_300 + 31 37 0.00032 0.278 CTCTTTC
CTTTTTY MEME-2 intergenic_223 + 38 44 0.00032 0.278 CTCTTTC
CTTTTTY MEME-2 intergenic_369 - 57 63 0.00032 0.278 CTCTTTC
CTTTTTY MEME-2 intergenic_488 + 65 71 0.00032 0.278 CTCTTTC
CTTTTTY MEME-2 intergenic_88 + 68 74 0.00032 0.278 CTCTTTC
CTTTTTY MEME-2 intergenic_101 + 71 77 0.00032 0.278 CTCTTTC
CTTTTTY MEME-2 intergenic_138 - 75 81 0.00032 0.278 CTCTTTC
CTTTTTY MEME-2 intergenic_18 + 87 93 0.00032 0.278 CTCTTTC
CTTTTTY MEME-2 intergenic_128 + 88 94 0.00032 0.278 CTCTTTC
CTTTTTY MEME-2 intergenic_284 - 83 89 0.00032 0.278 CTCTTTC
CTTTTTY MEME-2 intergenic_80 - 85 91 0.00032 0.278 CTCTTTC
CTTTTTY MEME-2 intergenic_492 - 89 95 0.00032 0.278 CTCTTTC
MAAARAAG MEME-1 intergenic_478 + 4 11 0.000329 0.304 CAAGGAAG
MAAARAAG MEME-1 intergenic_359 - 76 83 0.000329 0.304 CAAGGAAG
MAAARAAG MEME-1 intergenic_460 + 4 11 0.000344 0.304 CAAAGAGG
MAAARAAG MEME-1 intergenic_192 + 39 46 0.000344 0.304 CAAAGAGG
MAAARAAG MEME-1 intergenic_160 + 49 56 0.000344 0.304 CAAAGAGG
MAAARAAG MEME-1 intergenic_410 + 73 80 0.000344 0.304 CAAAGAGG
MAAARAAG MEME-1 intergenic_298 + 78 85 0.000344 0.304 CAAAGAGG
TGGAGGAR MEME-4 intergenic_303 - 82 89 0.000351 0.672 TGGAGGCG
MAAARAAG MEME-1 intergenic_492 + 5 12 0.000362 0.311 GAAAAGAG
MAAARAAG MEME-1 intergenic_155 + 50 57 0.000362 0.311 GAAAAGAG
MAAARAAG MEME-1 intergenic_245 + 54 61 0.000362 0.311 GAAAAGAG
MAAARAAG MEME-1 intergenic_50 + 25 32 0.00038 0.311 AAAGAGAG
MAAARAAG MEME-1 intergenic_300 - 29 36 0.00038 0.311 AAAGAGAG
MAAARAAG MEME-1 intergenic_88 - 66 73 0.00038 0.311 AAAGAGAG
MAAARAAG MEME-1 intergenic_37 - 67 74 0.00038 0.311 AAAGAGAG
MAAARAAG MEME-1 intergenic_337 - 87 94 0.00038 0.311 AAAGAGAG
MAAARAAG MEME-1 intergenic_111 - 29 36 0.000398 0.314 AAAAAGGG
MAAARAAG MEME-1 intergenic_284 - 53 60 0.000398 0.314 AAAAAGGG
MAAARAAG MEME-1 intergenic_299 - 63 70 0.000398 0.314 AAAAAGGG
MAAARAAG MEME-1 intergenic_347 + 82 89 0.000398 0.314 AAAAAGGG
TGGAGGAR MEME-4 intergenic_394 + 3 10 0.000411 0.672 TGGAGTAA
TGGAGGAR MEME-4 intergenic_250 + 3 10 0.000411 0.672 TGGAGAAA
TGGAGGAR MEME-4 intergenic_500 - 8 15 0.000411 0.672 TGGAGTAA
TGGAGGAR MEME-4 intergenic_184 - 14 21 0.000411 0.672 TGGAGTAA
TGGAGGAR MEME-4 intergenic_421 - 17 24 0.000411 0.672 TGGAGAAA
TGGAGGAR MEME-4 intergenic_327 + 54 61 0.000411 0.672 TGGAGTAA
TGGAGGAR MEME-4 intergenic_172 - 75 82 0.000411 0.672 TGGAGTAA
MAAARAAG MEME-1 intergenic_82 - 13 20 0.000412 0.32 GAAAGGAG
MAAARAAG MEME-1 intergenic_255 - 88 95 0.000412 0.32 GAAAGGAG
MAAARAAG MEME-1 intergenic_382 - 3 10 0.000442 0.34 CAAGAGAG
MAAARAAG MEME-1 intergenic_111 - 28 35 0.000457 0.346 AAAAGGGG
MAAARAAG MEME-1 intergenic_299 - 62 69 0.000457 0.346 AAAAGGGG
MAAARAAG MEME-1 intergenic_365 - 25 32 0.000471 0.351 CAAAAGGG
MAAARAAG MEME-1 intergenic_408 + 87 94 0.000471 0.351 CAAAAGGG
MAAARAAG MEME-1 intergenic_474 - 27 34 0.000483 0.354 CAAGGGAG
MAAARAAG MEME-1 intergenic_78 - 90 97 0.000483 0.354 CAAGGGAG
CTTTTTY MEME-2 intergenic_375 + 3 9 0.000496 0.29 CTTTTTA
CTTTTTY MEME-2 intergenic_471 + 8 14 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_496 - 2 8 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_435 - 3 9 0.000496 0.29 CTTTTTA
CTTTTTY MEME-2 intergenic_231 - 3 9 0.000496 0.29 CTTTTTA
CTTTTTY MEME-2 intergenic_151 - 5 11 0.000496 0.29 CTTTTTA
CTTTTTY MEME-2 intergenic_494 - 5 11 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_244 - 5 11 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_91 - 8 14 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_117 - 8 14 0.000496 0.29 CTTTTTA
CTTTTTY MEME-2 intergenic_365 + 14 20 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_487 - 9 15 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_24 + 17 23 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_217 + 19 25 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_345 + 23 29 0.000496 0.29 CTTTTTA
CTTTTTY MEME-2 intergenic_408 - 17 23 0.000496 0.29 CTTTTTA
CTTTTTY MEME-2 intergenic_471 - 23 29 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_213 - 23 29 0.000496 0.29 CTTTTTA
CTTTTTY MEME-2 intergenic_252 - 24 30 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_167 - 30 36 0.000496 0.29 CTTTTTA
CTTTTTY MEME-2 intergenic_24 + 41 47 0.000496 0.29 CTTTTTA
CTTTTTY MEME-2 intergenic_282 + 44 50 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_256 - 40 46 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_263 + 47 53 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_95 - 44 50 0.000496 0.29 CTTTTTA
CTTTTTY MEME-2 intergenic_361 - 47 53 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_198 - 49 55 0.000496 0.29 CTTTTTA
CTTTTTY MEME-2 intergenic_476 - 51 57 0.000496 0.29 CTTTTTA
CTTTTTY MEME-2 intergenic_394 + 57 63 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_53 + 59 65 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_404 + 62 68 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_361 - 58 64 0.000496 0.29 CTTTTTA
CTTTTTY MEME-2 intergenic_140 + 68 74 0.000496 0.29 CTTTTTA
CTTTTTY MEME-2 intergenic_271 - 64 70 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_408 + 73 79 0.000496 0.29 CTTTTTA
CTTTTTY MEME-2 intergenic_460 - 68 74 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_346 - 68 74 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_9 + 76 82 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_23 - 70 76 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_247 + 77 83 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_238 - 71 77 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_349 - 72 78 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_15 + 80 86 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_397 - 75 81 0.000496 0.29 CTTTTTA
CTTTTTY MEME-2 intergenic_452 + 82 88 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_222 + 82 88 0.000496 0.29 CTTTTTA
CTTTTTY MEME-2 intergenic_302 - 79 85 0.000496 0.29 CTTTTTA
CTTTTTY MEME-2 intergenic_287 - 80 86 0.000496 0.29 CTTTTTG
CTTTTTY MEME-2 intergenic_456 - 80 86 0.000496 0.29 CTTTTTA
CTTTTTY MEME-2 intergenic_64 + 91 97 0.000496 0.29 CTTTTTG
MAAARAAG MEME-1 intergenic_239 + 14 21 0.000513 0.358 GAAGAAAG
MAAARAAG MEME-1 intergenic_64 - 17 24 0.000513 0.358 GAAGAAAG
MAAARAAG MEME-1 intergenic_354 - 20 27 0.000513 0.358 GAAGAAAG
MAAARAAG MEME-1 intergenic_85 + 63 70 0.000513 0.358 GAAGAAAG
MAAARAAG MEME-1 intergenic_375 - 73 80 0.000513 0.358 GAAGAAAG
MAAARAAG MEME-1 intergenic_453 - 5 12 0.000531 0.358 GAAAAAGG
MAAARAAG MEME-1 intergenic_485 + 37 44 0.000531 0.358 GAAAAAGG
MAAARAAG MEME-1 intergenic_279 + 80 87 0.000531 0.358 GAAAAAGG
MAAARAAG MEME-1 intergenic_103 + 87 94 0.000531 0.358 GAAAAAGG
MAAARAAG MEME-1 intergenic_93 + 7 14 0.000549 0.358 AAAGAAGG
MAAARAAG MEME-1 intergenic_483 + 51 58 0.000549 0.358 AAAGAAGG
MAAARAAG MEME-1 intergenic_54 + 66 73 0.000549 0.358 AAAGAAGG
MAAARAAG MEME-1 intergenic_441 + 84 91 0.000549 0.358 AAAGAAGG
MAAARAAG MEME-1 intergenic_411 - 78 85 0.000549 0.358 AAAGAAGG
MAAARAAG MEME-1 intergenic_295 + 90 97 0.000549 0.358 AAAGAAGG
MAAARAAG MEME-1 intergenic_321 + 7 14 0.000564 0.363 GAAGGAAG
MAAARAAG MEME-1 intergenic_115 + 17 24 0.000564 0.363 GAAGGAAG
TGGAGGAR MEME-4 intergenic_298 - 16 23 0.000574 0.672 TGCAGGAG
TGGAGGAR MEME-4 intergenic_243 - 18 25 0.000574 0.672 TGGAAGAG
TGGAGGAR MEME-4 intergenic_67 - 19 26 0.000574 0.672 TGGAGGGA
TGGAGGAR MEME-4 intergenic_335 + 34 41 0.000574 0.672 TGGATGAG
TGGAGGAR MEME-4 intergenic_116 - 35 42 0.000574 0.672 TAGAGGAG
TGGAGGAR MEME-4 intergenic_2 - 37 44 0.000574 0.672 TGGAAGAG
TGGAGGAR MEME-4 intergenic_417 - 38 45 0.000574 0.672 TGGAAGAG
TGGAGGAR MEME-4 intergenic_365 - 44 51 0.000574 0.672 TGCAGGAG
TGGAGGAR MEME-4 intergenic_43 - 44 51 0.000574 0.672 TTGAGGAG
TGGAGGAR MEME-4 intergenic_164 - 47 54 0.000574 0.672 TGGAAGAG
TGGAGGAR MEME-4 intergenic_146 + 54 61 0.000574 0.672 TGGAAGAG
TGGAGGAR MEME-4 intergenic_71 - 51 58 0.000574 0.672 TGGATGAG
TGGAGGAR MEME-4 intergenic_446 - 59 66 0.000574 0.672 TGGAGGGA
TGGAGGAR MEME-4 intergenic_358 + 66 73 0.000574 0.672 TGAAGGAG
TGGAGGAR MEME-4 intergenic_101 - 61 68 0.000574 0.672 TGCAGGAG
TGGAGGAR MEME-4 intergenic_130 + 68 75 0.000574 0.672 TGAAGGAG
TGGAGGAR MEME-4 intergenic_254 + 71 78 0.000574 0.672 TGAAGGAG
TGGAGGAR MEME-4 intergenic_469 - 65 72 0.000574 0.672 TGGAGGCA
TGGAGGAR MEME-4 intergenic_204 + 74 81 0.000574 0.672 TGCAGGAG
TGGAGGAR MEME-4 intergenic_317 + 77 84 0.000574 0.672 TGGAGGGA
TGGAGGAR MEME-4 intergenic_233 + 80 87 0.000574 0.672 TGAAGGAG
TGGAGGAR MEME-4 intergenic_366 - 82 89 0.000574 0.672 TGGAGGTA
TGGAGGAR MEME-4 intergenic_237 + 92 99 0.000574 0.672 TGGATGAG
TGGAGGAR MEME-4 intergenic_10 - 91 98 0.000574 0.672 TGGAAGAG
TGGAGGAR MEME-4 intergenic_75 - 91 98 0.000574 0.672 TGCAGGAG
TGGAGGAR MEME-4 intergenic_406 - 92 99 0.000574 0.672 TTGAGGAG
MAAARAAG MEME-1 intergenic_492 + 89 96 0.000578 0.368 GAAAGAGG
MAAARAAG MEME-1 intergenic_82 - 12 19 0.000593 0.368 AAAGGAGG
MAAARAAG MEME-1 intergenic_420 - 64 71 0.000593 0.368 AAAGGAGG
MAAARAAG MEME-1 intergenic_287 + 83 90 0.000593 0.368 AAAGGAGG
MAAARAAG MEME-1 intergenic_255 - 87 94 0.000593 0.368 AAAGGAGG
MAAARAAG MEME-1 intergenic_301 - 45 52 0.000608 0.37 CAAGAAGG
MAAARAAG MEME-1 intergenic_36 + 57 64 0.000608 0.37 CAAGAAGG
MAAARAAG MEME-1 intergenic_392 - 73 80 0.000608 0.37 CAAGAAGG
MAAARAAG MEME-1 intergenic_269 - 1 8 0.00062 0.375 CAAGGAGG
MAAARAAG MEME-1 intergenic_489 - 29 36 0.000649 0.389 GAAAAGGG
MAAARAAG MEME-1 intergenic_160 + 50 57 0.000664 0.389 AAAGAGGG
CTTTTTY MEME-2 intergenic_316 + 1 7 0.000672 0.32 CTATTTT
CTTTTTY MEME-2 intergenic_182 + 11 17 0.000672 0.32 CTATTTT
CTTTTTY MEME-2 intergenic_229 + 14 20 0.000672 0.32 CTATTTT
CTTTTTY MEME-2 intergenic_351 - 10 16 0.000672 0.32 CTGTTTT
CTTTTTY MEME-2 intergenic_362 + 18 24 0.000672 0.32 CTATTTT
CTTTTTY MEME-2 intergenic_202 - 16 22 0.000672 0.32 CTATTTT
CTTTTTY MEME-2 intergenic_59 - 20 26 0.000672 0.32 CTGTTTT
CTTTTTY MEME-2 intergenic_208 - 25 31 0.000672 0.32 CTGTTTT
CTTTTTY MEME-2 intergenic_154 + 32 38 0.000672 0.32 CTGTTTT
CTTTTTY MEME-2 intergenic_175 - 27 33 0.000672 0.32 CTGTTTT
CTTTTTY MEME-2 intergenic_438 - 30 36 0.000672 0.32 CTATTTT
CTTTTTY MEME-2 intergenic_213 - 31 37 0.000672 0.32 CTGTTTT
CTTTTTY MEME-2 intergenic_182 + 38 44 0.000672 0.32 CTGTTTT
CTTTTTY MEME-2 intergenic_99 + 40 46 0.000672 0.32 CTGTTTT
CTTTTTY MEME-2 intergenic_131 + 47 53 0.000672 0.32 CTGTTTT
CTTTTTY MEME-2 intergenic_152 - 43 49 0.000672 0.32 CTATTTT
CTTTTTY MEME-2 intergenic_90 + 50 56 0.000672 0.32 CTATTTT
CTTTTTY MEME-2 intergenic_247 + 53 59 0.000672 0.32 CTGTTTT
CTTTTTY MEME-2 intergenic_271 + 54 60 0.000672 0.32 CTATTTT
CTTTTTY MEME-2 intergenic_211 + 63 69 0.000672 0.32 CTGTTTT
CTTTTTY MEME-2 intergenic_267 + 68 74 0.000672 0.32 CTATTTT
CTTTTTY MEME-2 intergenic_278 + 70 76 0.000672 0.32 CTATTTT
CTTTTTY MEME-2 intergenic_171 + 70 76 0.000672 0.32 CTATTTT
CTTTTTY MEME-2 intergenic_324 - 66 72 0.000672 0.32 CTATTTT
CTTTTTY MEME-2 intergenic_84 - 66 72 0.000672 0.32 CTATTTT
CTTTTTY MEME-2 intergenic_361 - 72 78 0.000672 0.32 CTATTTT
CTTTTTY MEME-2 intergenic_270 + 79 85 0.000672 0.32 CTGTTTT
CTTTTTY MEME-2 intergenic_321 - 75 81 0.000672 0.32 CTGTTTT
CTTTTTY MEME-2 intergenic_42 + 82 88 0.000672 0.32 CTATTTT
CTTTTTY MEME-2 intergenic_4 + 82 88 0.000672 0.32 CTATTTT
CTTTTTY MEME-2 intergenic_403 + 85 91 0.000672 0.32 CTGTTTT
CTTTTTY MEME-2 intergenic_401 - 81 87 0.000672 0.32 CTGTTTT
CTTTTTY MEME-2 intergenic_261 - 86 92 0.000672 0.32 CTATTTT
CTTTTTY MEME-2 intergenic_484 - 89 95 0.000672 0.32 CTATTTT
CTTTTTY MEME-2 intergenic_246 - 89 95 0.000672 0.32 CTATTTT
MAAARAAG MEME-1 intergenic_224 + 57 64 0.000676 0.389 GAAGGGAG
MAAARAAG MEME-1 intergenic_442 - 84 91 0.000676 0.389 GAAGGGAG
MAAARAAG MEME-1 intergenic_114 + 33 40 0.000712 0.389 CAAGAGGG
MAAARAAG MEME-1 intergenic_348 + 62 69 0.000712 0.389 CAAGAGGG
TGGAGGAR MEME-4 intergenic_10 + 1 8 0.000725 0.672 TGGACGAA
TGGAGGAR MEME-4 intergenic_292 + 8 15 0.000725 0.672 TTGAGGAA
TGGAGGAR MEME-4 intergenic_348 + 11 18 0.000725 0.672 TGTAGGAA
TGGAGGAR MEME-4 intergenic_115 + 12 19 0.000725 0.672 TGGAAGAA
TGGAGGAR MEME-4 intergenic_411 + 12 19 0.000725 0.672 TGGATGAA
TGGAGGAR MEME-4 intergenic_405 - 6 13 0.000725 0.672 TGGAAGAA
TGGAGGAR MEME-4 intergenic_152 - 6 13 0.000725 0.672 TGGAAGAA
TGGAGGAR MEME-4 intergenic_437 - 14 21 0.000725 0.672 TGGACGAA
TGGAGGAR MEME-4 intergenic_337 + 24 31 0.000725 0.672 TTGAGGAA
TGGAGGAR MEME-4 intergenic_414 + 26 33 0.000725 0.672 TGGAAGAA
TGGAGGAR MEME-4 intergenic_77 - 19 26 0.000725 0.672 TGGAAGAA
TGGAGGAR MEME-4 intergenic_256 + 29 36 0.000725 0.672 TGGAAGAA
TGGAGGAR MEME-4 intergenic_31 - 36 43 0.000725 0.672 TGGACGAA
TGGAGGAR MEME-4 intergenic_155 + 45 52 0.000725 0.672 TGAAGGAA
TGGAGGAR MEME-4 intergenic_436 + 59 66 0.000725 0.672 TAGAGGAA
TGGAGGAR MEME-4 intergenic_247 - 58 65 0.000725 0.672 TTGAGGAA
TGGAGGAR MEME-4 intergenic_364 - 58 65 0.000725 0.672 TGGAAGAA
TGGAGGAR MEME-4 intergenic_234 - 62 69 0.000725 0.672 TTGAGGAA
TGGAGGAR MEME-4 intergenic_50 + 70 77 0.000725 0.672 TGGAAGAA
TGGAGGAR MEME-4 intergenic_455 + 72 79 0.000725 0.672 TTGAGGAA
TGGAGGAR MEME-4 intergenic_171 - 75 82 0.000725 0.672 TGGATGAA
TGGAGGAR MEME-4 intergenic_403 + 91 98 0.000725 0.672 TGGATGAA
TGGAGGAR MEME-4 intergenic_109 - 88 95 0.000725 0.672 TGGAAGAA
MAAARAAG MEME-1 intergenic_115 + 14 21 0.000737 0.389 GAAGAAGG
MAAARAAG MEME-1 intergenic_365 - 37 44 0.000737 0.389 GAAGAAGG
MAAARAAG MEME-1 intergenic_70 - 56 63 0.000737 0.389 GAAGAAGG
GCTCCCGC MEME-3 intergenic_36 - 4 11 0.000742 1 ACACCCGC
GCTCCCGC MEME-3 intergenic_458 - 10 17 0.000742 1 GCACGCGC
GCTCCCGC MEME-3 intergenic_162 - 13 20 0.000742 1 TCGCCCGC
GCTCCCGC MEME-3 intergenic_234 - 17 24 0.000742 1 GCACCGGC
GCTCCCGC MEME-3 intergenic_137 - 17 24 0.000742 1 GCACCCAC
GCTCCCGC MEME-3 intergenic_32 - 30 37 0.000742 1 GCACCAGC
GCTCCCGC MEME-3 intergenic_27 + 38 45 0.000742 1 GCCCCAGC
GCTCCCGC MEME-3 intergenic_452 - 31 38 0.000742 1 GCATCCGC
GCTCCCGC MEME-3 intergenic_191 + 38 45 0.000742 1 GCACCTGC
GCTCCCGC MEME-3 intergenic_51 - 35 42 0.000742 1 GCACCGGC
GCTCCCGC MEME-3 intergenic_289 + 43 50 0.000742 1 TCACCCGC
GCTCCCGC MEME-3 intergenic_444 + 45 52 0.000742 1 GCAGCCGC
GCTCCCGC MEME-3 intergenic_472 - 40 47 0.000742 1 TCACCCGC
GCTCCCGC MEME-3 intergenic_330 + 48 55 0.000742 1 GCACTCGC
GCTCCCGC MEME-3 intergenic_126 + 49 56 0.000742 1 GCGCCCTC
GCTCCCGC MEME-3 intergenic_83 + 50 57 0.000742 1 GCACCAGC
GCTCCCGC MEME-3 intergenic_102 - 45 52 0.000742 1 GCCCCCTC
GCTCCCGC MEME-3 intergenic_254 - 45 52 0.000742 1 GCACGCGC
GCTCCCGC MEME-3 intergenic_362 + 53 60 0.000742 1 GCACCAGC
GCTCCCGC MEME-3 intergenic_260 - 49 56 0.000742 1 TCGCCCGC
GCTCCCGC MEME-3 intergenic_304 + 62 69 0.000742 1 GGGCCCGC
GCTCCCGC MEME-3 intergenic_304 - 58 65 0.000742 1 GCCCCCGT
GCTCCCGC MEME-3 intergenic_486 + 72 79 0.000742 1 GCCCCAGC
GCTCCCGC MEME-3 intergenic_320 + 74 81 0.000742 1 GCAGCCGC
GCTCCCGC MEME-3 intergenic_51 - 68 75 0.000742 1 GCACCAGC
GCTCCCGC MEME-3 intergenic_161 - 73 80 0.000742 1 ACACCCGC
GCTCCCGC MEME-3 intergenic_357 - 75 82 0.000742 1 ACACCCGC
GCTCCCGC MEME-3 intergenic_47 - 89 96 0.000742 1 GAACCCGC
TGGAGGAR MEME-4 intergenic_406 - 55 62 0.000747 0.672 TGGGGGAC
MAAARAAG MEME-1 intergenic_130 - 25 32 0.000749 0.389 GAAGGAGG
MAAARAAG MEME-1 intergenic_194 - 56 63 0.000749 0.389 GAAGGAGG
MAAARAAG MEME-1 intergenic_358 + 67 74 0.000749 0.389 GAAGGAGG
MAAARAAG MEME-1 intergenic_54 + 69 76 0.000749 0.389 GAAGGAGG
MAAARAAG MEME-1 intergenic_41 + 15 22 0.000761 0.389 GAAGAGGG
MAAARAAG MEME-1 intergenic_17 - 88 95 0.000761 0.389 GAAGAGGG
TGGAGGAR MEME-4 intergenic_206 + 9 16 0.000774 0.672 TGGAGCAC
TGGAGGAR MEME-4 intergenic_431 + 10 17 0.000774 0.672 TGGAGCAC
TGGAGGAR MEME-4 intergenic_112 + 12 19 0.000774 0.672 TGGAGCAT
TGGAGGAR MEME-4 intergenic_311 - 47 54 0.000774 0.672 TGGAGCAT
TGGAGGAR MEME-4 intergenic_405 + 64 71 0.000774 0.672 TGGAGCAT
TGGAGGAR MEME-4 intergenic_304 + 78 85 0.000774 0.672 TGGAGCAT
MAAARAAG MEME-1 intergenic_338 + 17 24 0.000797 0.389 TAAAAAAG
MAAARAAG MEME-1 intergenic_466 - 17 24 0.000797 0.389 TAAAAAAG
MAAARAAG MEME-1 intergenic_177 - 18 25 0.000797 0.389 TAAAAAAG
MAAARAAG MEME-1 intergenic_7 - 19 26 0.000797 0.389 TAAAAAAG
MAAARAAG MEME-1 intergenic_486 - 25 32 0.000797 0.389 TAAAAAAG
MAAARAAG MEME-1 intergenic_159 - 28 35 0.000797 0.389 TAAAAAAG
MAAARAAG MEME-1 intergenic_108 + 37 44 0.000797 0.389 TAAAAAAG
MAAARAAG MEME-1 intergenic_177 - 52 59 0.000797 0.389 TAAAAAAG
MAAARAAG MEME-1 intergenic_302 + 59 66 0.000797 0.389 TAAAAAAG
MAAARAAG MEME-1 intergenic_366 - 57 64 0.000797 0.389 TAAAAAAG
MAAARAAG MEME-1 intergenic_193 + 74 81 0.000797 0.389 TAAAAAAG
MAAARAAG MEME-1 intergenic_481 + 82 89 0.000797 0.389 TAAAAAAG
MAAARAAG MEME-1 intergenic_107 - 75 82 0.000797 0.389 TAAAAAAG
MAAARAAG MEME-1 intergenic_251 - 86 93 0.000797 0.389 TAAAAAAG
TGGAGGAR MEME-4 intergenic_361 + 6 13 0.000836 0.694 TGGGGAAG
TGGAGGAR MEME-4 intergenic_196 - 11 18 0.000836 0.694 TGGTGCAG
TGGAGGAR MEME-4 intergenic_362 - 51 58 0.000836 0.694 TGGTGCAG
TGGAGGAR MEME-4 intergenic_195 - 62 69 0.000836 0.694 TGGGGTAG
TGGAGGAR MEME-4 intergenic_257 - 80 87 0.000836 0.694 TGGTGCAG
MAAARAAG MEME-1 intergenic_4 + 14 21 0.000845 0.389 AAAACAAG
MAAARAAG MEME-1 intergenic_99 - 15 22 0.000845 0.389 AAAACAAG
MAAARAAG MEME-1 intergenic_219 - 19 26 0.000845 0.389 AAAACAAG
MAAARAAG MEME-1 intergenic_456 + 27 34 0.000845 0.389 AAAACAAG
MAAARAAG MEME-1 intergenic_147 + 31 38 0.000845 0.389 AAAATAAG
MAAARAAG MEME-1 intergenic_89 + 45 52 0.000845 0.389 AAAATAAG
MAAARAAG MEME-1 intergenic_88 - 50 57 0.000845 0.389 AAAATAAG
MAAARAAG MEME-1 intergenic_419 - 56 63 0.000845 0.389 AAAACAAG
MAAARAAG MEME-1 intergenic_240 + 72 79 0.000845 0.389 AAAATAAG
MAAARAAG MEME-1 intergenic_301 - 93 100 0.000845 0.389 AAAATAAG
MAAARAAG MEME-1 intergenic_13 + 8 15 0.000867 0.389 TAAAGAAG
MAAARAAG MEME-1 intergenic_448 + 14 21 0.000867 0.389 TAAAGAAG
MAAARAAG MEME-1 intergenic_231 + 17 24 0.000867 0.389 TAAAGAAG
MAAARAAG MEME-1 intergenic_119 + 21 28 0.000867 0.389 TAAAGAAG
MAAARAAG MEME-1 intergenic_269 - 21 28 0.000867 0.389 TAAAGAAG
MAAARAAG MEME-1 intergenic_6 - 31 38 0.000867 0.389 TAAAGAAG
MAAARAAG MEME-1 intergenic_16 + 43 50 0.000867 0.389 TAAAGAAG
MAAARAAG MEME-1 intergenic_24 + 46 53 0.000867 0.389 TAAAGAAG
MAAARAAG MEME-1 intergenic_295 - 41 48 0.000867 0.389 TAAAGAAG
MAAARAAG MEME-1 intergenic_483 + 50 57 0.000867 0.389 TAAAGAAG
MAAARAAG MEME-1 intergenic_481 + 52 59 0.000867 0.389 TAAAGAAG
MAAARAAG MEME-1 intergenic_105 - 78 85 0.000867 0.389 TAAAGAAG
TGGAGGAR MEME-4 intergenic_297 + 33 40 0.000902 0.736 CGGAGCAG
TGGAGGAR MEME-4 intergenic_214 + 43 50 0.000902 0.736 GGGGGGAA
MAAARAAG MEME-1 intergenic_202 + 15 22 0.000915 0.389 AAAAATAG
MAAARAAG MEME-1 intergenic_182 - 11 18 0.000915 0.389 AAAAATAG
MAAARAAG MEME-1 intergenic_175 + 26 33 0.000915 0.389 AAAAACAG
MAAARAAG MEME-1 intergenic_213 + 30 37 0.000915 0.389 AAAAACAG
MAAARAAG MEME-1 intergenic_99 - 40 47 0.000915 0.389 AAAAACAG
MAAARAAG MEME-1 intergenic_131 - 47 54 0.000915 0.389 AAAAACAG
MAAARAAG MEME-1 intergenic_361 + 71 78 0.000915 0.389 AAAAATAG
MAAARAAG MEME-1 intergenic_267 - 68 75 0.000915 0.389 AAAAATAG
MAAARAAG MEME-1 intergenic_401 + 80 87 0.000915 0.389 AAAAACAG
MAAARAAG MEME-1 intergenic_270 - 79 86 0.000915 0.389 AAAAACAG
MAAARAAG MEME-1 intergenic_484 + 88 95 0.000915 0.389 AAAAATAG
MAAARAAG MEME-1 intergenic_42 - 82 89 0.000915 0.389 AAAAATAG
MAAARAAG MEME-1 intergenic_187 - 14 21 0.000955 0.391 CAAACAAG
MAAARAAG MEME-1 intergenic_382 + 26 33 0.000955 0.391 CAAATAAG
MAAARAAG MEME-1 intergenic_394 - 21 28 0.000955 0.391 CAAACAAG
MAAARAAG MEME-1 intergenic_390 - 43 50 0.000955 0.391 CAAATAAG
MAAARAAG MEME-1 intergenic_119 + 57 64 0.000955 0.391 CAAACAAG
MAAARAAG MEME-1 intergenic_461 - 53 60 0.000955 0.391 CAAACAAG
MAAARAAG MEME-1 intergenic_268 - 70 77 0.000955 0.391 CAAATAAG
MAAARAAG MEME-1 intergenic_415 + 81 88 0.000955 0.391 CAAACAAG
TGGAGGAR MEME-4 intergenic_32 + 32 39 0.000958 0.755 TGGTGCAA
TGGAGGAR MEME-4 intergenic_169 - 26 33 0.000958 0.755 TGGCGCAA
TGGAGGAR MEME-4 intergenic_447 + 55 62 0.000958 0.755 TGGGGTAA
TGGAGGAR MEME-4 intergenic_276 + 60 67 0.000958 0.755 TGGGGTAA
MAAARAAG MEME-1 intergenic_7 - 16 23 0.000995 0.396 AAAAGTAG
MAAARAAG MEME-1 intergenic_107 + 26 33 0.000995 0.396 AAAAGCAG
MAAARAAG MEME-1 intergenic_395 + 31 38 0.000995 0.396 AAAAGTAG
MAAARAAG MEME-1 intergenic_253 + 59 66 0.000995 0.396 AAAAGTAG
MAAARAAG MEME-1 intergenic_147 + 63 70 0.000995 0.396 AAAAGCAG
MAAARAAG MEME-1 intergenic_7 - 82 89 0.000995 0.396 AAAAGCAG

DEBUGGING INFORMATION

Command line:

fimo -thresh 0.001 meme_out/meme.txt intergenic_500.fasta

Settings:

output_directory = fimo_out MEME file name = meme_out/meme.txt sequence file name = intergenic_500.fasta
background file name = --nrdb-- alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = false
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.001 pseudocount = 0.1
alpha = 1 verbosity = 2

This information can be useful in the event you wish to report a problem with the FIMO software.


Go to top