RID: 03GC5247014 Job Title:POLS_JAEVM P0DOK8 Structural polyprotein OS=Japanese... Program: BLASTP Query: POLS_JAEVM P0DOK8 Structural polyprotein OS=Japanese encephalitis virus (strain M28) OX=2555554 PE=3 SV=1 Small envelope protein M [220:294] ID: lcl|Query_12156476(amino acid) Length: 75 Database: swissprot Non-redundant UniProtKB/SwissProt sequences Sequences producing significant alignments: Scientific Common Max Total Query E Per. Acc. Description Name Name Taxid Score Score cover Value Ident Len Accession RecName: Full=Structural polyprotein; Contains: RecName:... Japanese enc... NA 2555554 155 155 100% 1e-44 100.00 1198 P0DOK8.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Japanese enc... NA 2555554 154 154 100% 2e-44 100.00 3432 G3FEX6.1 RecName: Full=Structural polyprotein; Contains: RecName:... Japanese enc... NA 11074 152 152 100% 1e-43 97.33 1198 P0DOH9.1 RecName: Full=Structural polyprotein; Contains: RecName:... Japanese enc... NA 11075 152 152 100% 1e-43 97.33 1198 P0DOH8.1 RecName: Full=Structural polyprotein; Contains: RecName:... Japanese enc... NA 11073 152 152 100% 1e-43 97.33 1198 P0DOH7.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Japanese enc... NA 11075 151 151 100% 2e-43 97.33 3432 P32886.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Japanese enc... NA 11074 151 151 100% 2e-43 97.33 3432 P19110.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Japanese enc... NA 11073 151 151 100% 2e-43 97.33 3432 P27395.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Japanese enc... NA 11076 141 141 100% 8e-40 92.11 1440 P14403.1 RecName: Full=Genome polyprotein; Contains: RecName:... Murray valle... NA 301478 137 137 100% 2e-38 82.67 3434 P05769.2 RecName: Full=Genome polyprotein; Contains: RecName:... West Nile virus NA 11082 127 127 99% 9e-35 79.73 3430 P06935.2 RecName: Full=Genome polyprotein; Contains: RecName:... Usutu virus NA 64286 119 119 100% 5e-32 84.00 3434 Q5WPU5.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Rocio virus NA 64315 108 108 100% 2e-28 62.67 3425 Q32ZD4.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... St. Louis en... NA 11081 107 107 96% 5e-28 63.89 3412 P09732.2 RecName: Full=Genome polyprotein; Contains: RecName:... West Nile vi... NA 1968826 107 107 99% 6e-28 77.03 3433 Q9Q6P4.2 RecName: Full=Genome polyprotein; Contains: RecName:... Kunjin virus... NA 11078 105 105 99% 4e-27 77.03 3433 P14335.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Tembusu virus NA 64293 97.8 97.8 99% 2e-24 58.11 3425 G1CRV4.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Kokobera virus NA 44024 90.9 90.9 97% 5e-22 50.68 3410 Q32ZD5.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Ilheus virus NA 59563 90.1 90.1 100% 9e-22 58.67 3424 Q32ZD7.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Bussuquara v... NA 64304 87.4 87.4 92% 8e-21 52.17 3429 Q32ZE0.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Zika virus NA 64320 85.5 85.5 100% 3e-20 44.00 3419 Q32ZE1.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Dengue virus... NA 408688 70.5 70.5 99% 6e-15 41.89 3387 Q2YHF0.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Dengue virus... NA 408687 70.1 70.1 99% 1e-14 40.54 3387 Q5UCB8.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Dengue virus... NA 408686 70.1 70.1 99% 1e-14 40.54 3387 Q58HT7.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Dengue virus... NA 408871 70.1 70.1 99% 1e-14 40.54 3387 P09866.2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Dengue virus... NA 408689 69.7 69.7 99% 1e-14 40.54 3387 Q2YHF2.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Zika virus Z... NA 2316109 68.9 68.9 100% 3e-14 44.00 3423 A0A142I5B9.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Zika virus Z... NA 2043570 68.9 68.9 100% 3e-14 44.00 3423 A0A024B7W1.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Yellow fever... NA 31641 68.2 68.2 100% 4e-14 40.00 1163 P29165.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Yellow fever... NA 407138 68.2 68.2 100% 5e-14 40.00 3411 Q98803.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Yellow fever... NA 407140 67.8 67.8 100% 5e-14 38.67 3412 Q1X881.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Yellow fever... NA 407139 67.4 67.4 100% 7e-14 38.67 3412 Q1X880.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Yellow fever... NA 407141 67.0 67.0 100% 1e-13 38.67 3412 Q074N0.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Yellow fever... NA 407134 66.6 66.6 100% 2e-13 38.67 3411 Q6DV88.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Yellow fever... NA 407136 66.6 66.6 100% 2e-13 38.67 3411 Q6J3P1.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Wesselsbron ... NA 164416 66.2 66.2 96% 2e-13 43.06 3405 C5H431.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Yellow fever... NA 11090 65.9 65.9 100% 3e-13 38.67 3411 P03314.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Yellow fever... NA 407137 65.9 65.9 100% 3e-13 38.67 3411 Q9YRV3.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Yellow fever... NA 407135 65.9 65.9 100% 3e-13 38.67 3411 Q89277.2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Edge Hill virus NA 64296 61.2 61.2 96% 1e-11 34.72 3401 C8XPB2.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Banzi virus NA 38837 59.7 59.7 100% 4e-11 41.33 3393 C8XPA8.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Dengue virus... NA 408694 56.2 56.2 100% 7e-10 34.67 3391 Q9WDA6.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Dengue virus... NA 11066 56.2 56.2 100% 7e-10 34.67 3388 P12823.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Dengue virus... NA 11064 55.8 55.8 100% 9e-10 34.67 3391 P07564.2 RecName: Full=Genome polyprotein; Contains: RecName:... Dengue virus... NA 11068 55.8 55.8 100% 1e-09 34.67 679 P18356.2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Dengue virus... NA 11065 55.1 55.1 100% 2e-09 34.67 3391 P14340.2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Dengue virus... NA 413041 55.1 55.1 100% 2e-09 34.67 3391 P14337.2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Dengue virus... NA 31635 54.7 54.7 100% 3e-09 33.33 3391 P29991.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Dengue virus... NA 31634 54.3 54.3 100% 4e-09 33.33 3391 P29990.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Dengue virus... NA 408870 52.0 52.0 100% 2e-08 34.67 3390 P27915.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Dengue virus... NA 408690 52.0 52.0 100% 2e-08 34.67 3390 Q99D35.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Dengue virus... NA 408693 52.0 52.0 100% 2e-08 34.67 3390 Q5UB51.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Dengue virus... NA 408692 52.0 52.0 100% 2e-08 34.67 3390 Q6YMS4.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Dengue virus... NA 408691 52.0 52.0 100% 3e-08 34.67 3390 Q6YMS3.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Dengue virus... NA 31636 50.4 50.4 100% 7e-08 33.33 1127 P30026.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Dengue virus... NA 11057 49.7 49.7 100% 2e-07 30.67 792 P27912.1 RecName: Full=Genome polyprotein; Contains: RecName:... Dengue virus... NA 408685 49.3 49.3 100% 2e-07 32.00 3392 P27909.2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Dengue virus... NA 11059 49.3 49.3 100% 2e-07 32.00 3392 P17763.2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Dengue virus... NA 11058 49.3 49.3 100% 2e-07 30.67 791 P27913.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Dengue virus... NA 33741 48.1 48.1 100% 5e-07 30.67 3391 P33478.2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Smal... Dengue virus... NA 31637 45.1 45.1 65% 7e-06 36.73 555 P29984.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Omsk hemorrh... NA 12542 44.3 44.3 100% 1e-05 26.67 3414 Q7T6D2.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Alkhumra hem... NA 172148 41.6 41.6 100% 1e-04 26.67 3416 Q91B85.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Kyasanur For... NA 33743 41.2 41.2 100% 1e-04 26.67 3416 D7RF80.1 RecName: Full=Genome polyprotein; Contains: RecName:... Tick-borne p... NA 39008 40.4 40.4 100% 2e-04 26.67 3415 Q04538.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Langat virus... NA 31639 40.0 40.0 99% 4e-04 20.27 776 P29838.2 RecName: Full=Genome polyprotein; Contains: RecName:... Langat virus... NA 31638 37.7 37.7 99% 0.002 20.27 3414 P29837.2 Alignments: >RecName: Full=Structural polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1'; Short=NS1' [Japanese encephalitis virus strain M28] Sequence ID: P0DOK8.1 Length: 1198 Range 1: 220 to 294 Score:155 bits(391), Expect:1e-44, Method:Composition-based stats., Identities:75/75(100%), Positives:75/75(100%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR Sbjct 220 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 279 Query 61 VVFTILLLLVAPAYS 75 VVFTILLLLVAPAYS Sbjct 280 VVFTILLLLVAPAYS 294 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Japanese encephalitis virus strain M28] Sequence ID: G3FEX6.1 Length: 3432 Range 1: 220 to 294 Score:154 bits(389), Expect:2e-44, Method:Compositional matrix adjust., Identities:75/75(100%), Positives:75/75(100%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR Sbjct 220 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 279 Query 61 VVFTILLLLVAPAYS 75 VVFTILLLLVAPAYS Sbjct 280 VVFTILLLLVAPAYS 294 >RecName: Full=Structural polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1'; Short=NS1' [Japanese encephalitis virus strain SA(V)] Sequence ID: P0DOH9.1 Length: 1198 Range 1: 220 to 294 Score:152 bits(384), Expect:1e-43, Method:Composition-based stats., Identities:73/75(97%), Positives:74/75(98%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAA LGWMLGSN+GQR Sbjct 220 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAVLGWMLGSNNGQR 279 Query 61 VVFTILLLLVAPAYS 75 VVFTILLLLVAPAYS Sbjct 280 VVFTILLLLVAPAYS 294 >RecName: Full=Structural polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1'; Short=NS1' [Japanese encephalitis virus strain JAOARS982] Sequence ID: P0DOH8.1 Length: 1198 Range 1: 220 to 294 Score:152 bits(384), Expect:1e-43, Method:Composition-based stats., Identities:73/75(97%), Positives:74/75(98%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAA LGWMLGSN+GQR Sbjct 220 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAATLGWMLGSNNGQR 279 Query 61 VVFTILLLLVAPAYS 75 VVFTILLLLVAPAYS Sbjct 280 VVFTILLLLVAPAYS 294 >RecName: Full=Structural polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1'; Short=NS1' [Japanese encephalitis virus strain SA-14] Sequence ID: P0DOH7.1 Length: 1198 Range 1: 220 to 294 Score:152 bits(383), Expect:1e-43, Method:Composition-based stats., Identities:73/75(97%), Positives:74/75(98%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAA LGWMLGSN+GQR Sbjct 220 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAVLGWMLGSNNGQR 279 Query 61 VVFTILLLLVAPAYS 75 VVFTILLLLVAPAYS Sbjct 280 VVFTILLLLVAPAYS 294 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Japanese encephalitis virus strain JAOARS982] Sequence ID: P32886.1 Length: 3432 Range 1: 220 to 294 Score:151 bits(382), Expect:2e-43, Method:Compositional matrix adjust., Identities:73/75(97%), Positives:74/75(98%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAA LGWMLGSN+GQR Sbjct 220 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAATLGWMLGSNNGQR 279 Query 61 VVFTILLLLVAPAYS 75 VVFTILLLLVAPAYS Sbjct 280 VVFTILLLLVAPAYS 294 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Japanese encephalitis virus strain SA(V)] Sequence ID: P19110.1 Length: 3432 Range 1: 220 to 294 Score:151 bits(382), Expect:2e-43, Method:Compositional matrix adjust., Identities:73/75(97%), Positives:74/75(98%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAA LGWMLGSN+GQR Sbjct 220 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAVLGWMLGSNNGQR 279 Query 61 VVFTILLLLVAPAYS 75 VVFTILLLLVAPAYS Sbjct 280 VVFTILLLLVAPAYS 294 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Japanese encephalitis virus strain SA-14] Sequence ID: P27395.1 Length: 3432 Range 1: 220 to 294 Score:151 bits(382), Expect:2e-43, Method:Compositional matrix adjust., Identities:73/75(97%), Positives:74/75(98%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAA LGWMLGSN+GQR Sbjct 220 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAVLGWMLGSNNGQR 279 Query 61 VVFTILLLLVAPAYS 75 VVFTILLLLVAPAYS Sbjct 280 VVFTILLLLVAPAYS 294 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3 [Japanese encephalitis virus strain Nakayama] Sequence ID: P14403.1 Length: 1440 Range 1: 147 to 222 Score:141 bits(355), Expect:8e-40, Method:Compositional matrix adjust., Identities:70/76(92%), Positives:72/76(94%), Gaps:1/76(1%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWI+RNPGYAFLAA LGWMLGSN+GQR Sbjct 147 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIVRNPGYAFLAAILGWMLGSNNGQR 206 Query 61 V-VFTILLLLVAPAYS 75 FTILLLLVAPAYS Sbjct 207 RWYFTILLLLVAPAYS 222 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Murray valley encephalitis virus (strain MVE-1-51)] Sequence ID: P05769.2 Length: 3434 Range 1: 218 to 292 Score:137 bits(346), Expect:2e-38, Method:Compositional matrix adjust., Identities:62/75(83%), Positives:71/75(94%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 S++VQTHGES+LVNKK+AWLDSTKATRYL KTENWIIRNPGYA +A LGWMLGSN+GQ+ Sbjct 218 SITVQTHGESTLVNKKDAWLDSTKATRYLTKTENWIIRNPGYALVAVVLGWMLGSNTGQK 277 Query 61 VVFTILLLLVAPAYS 75 V+FT+LLLLVAPAYS Sbjct 278 VIFTVLLLLVAPAYS 292 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease/Helicase NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=NS5 [West Nile virus] Sequence ID: P06935.2 Length: 3430 Range 1: 217 to 290 Score:127 bits(318), Expect:9e-35, Method:Compositional matrix adjust., Identities:59/74(80%), Positives:68/74(91%), Gaps:0/74(0%) Query 2 VSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQRV 61 ++VQTHGES+L NKK AWLDSTKATRYL+KTE+WI+RNPGYA +AA +GWMLGSN+ QRV Sbjct 217 LTVQTHGESTLANKKGAWLDSTKATRYLVKTESWILRNPGYALVAAVIGWMLGSNTMQRV 276 Query 62 VFTILLLLVAPAYS 75 VF ILLLLVAPAYS Sbjct 277 VFAILLLLVAPAYS 290 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Usutu virus] Sequence ID: Q5WPU5.1 Length: 3434 Range 1: 219 to 293 Score:119 bits(298), Expect:5e-32, Method:Compositional matrix adjust., Identities:63/75(84%), Positives:70/75(93%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 S++VQTHGES L NKK+AWLDSTKA+RYLMKTENWIIRNPGYAF+A LGWMLGSN+GQR Sbjct 219 SIAVQTHGESMLANKKDAWLDSTKASRYLMKTENWIIRNPGYAFVAVLLGWMLGSNNGQR 278 Query 61 VVFTILLLLVAPAYS 75 VVF +LLLLVAPAYS Sbjct 279 VVFVVLLLLVAPAYS 293 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Rocio virus] Sequence ID: Q32ZD4.1 Length: 3425 Range 1: 211 to 285 Score:108 bits(271), Expect:2e-28, Method:Compositional matrix adjust., Identities:47/75(63%), Positives:60/75(80%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ +HGES L N+ WLD+ K T+YL K ENW+IRNPGYA +A A WMLGSN+ Q+ Sbjct 211 SVNIPSHGESQLENRGTPWLDTAKTTKYLTKVENWMIRNPGYAIVAVAAAWMLGSNTSQK 270 Query 61 VVFTILLLLVAPAYS 75 V+FTI+LLL+APAYS Sbjct 271 VIFTIMLLLIAPAYS 285 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=NS5 [St. Louis encephalitis virus (strain MS1-7)] Sequence ID: P09732.2 Length: 3412 Range 1: 217 to 288 Score:107 bits(268), Expect:5e-28, Method:Compositional matrix adjust., Identities:46/72(64%), Positives:58/72(80%), Gaps:0/72(0%) Query 4 VQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQRVVF 63 VQ HG+S+L K WLD+ K T+YL K ENW++RNPGYA +A A+GWMLGSN+ QRVVF Sbjct 217 VQHHGDSTLATKNTPWLDTVKTTKYLTKVENWVLRNPGYALVALAIGWMLGSNNTQRVVF 276 Query 64 TILLLLVAPAYS 75 I+L+L+APAYS Sbjct 277 VIMLMLIAPAYS 288 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease/Helicase NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=NS5 [West Nile virus strain NY-99] Sequence ID: Q9Q6P4.2 Length: 3433 Range 1: 217 to 290 Score:107 bits(268), Expect:6e-28, Method:Compositional matrix adjust., Identities:57/74(77%), Positives:68/74(91%), Gaps:0/74(0%) Query 2 VSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQRV 61 ++VQTHGES+L NKK AW+DSTKATRYL+KTE+WI+RNPGYA +AA +GWMLGSN+ QRV Sbjct 217 LTVQTHGESTLANKKGAWMDSTKATRYLVKTESWILRNPGYALVAAVIGWMLGSNTMQRV 276 Query 62 VFTILLLLVAPAYS 75 VF +LLLLVAPAYS Sbjct 277 VFVVLLLLVAPAYS 290 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease/Helicase NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=NS5 [Kunjin virus (STRAIN MRM61C)] Sequence ID: P14335.1 Length: 3433 Range 1: 217 to 290 Score:105 bits(262), Expect:4e-27, Method:Compositional matrix adjust., Identities:57/74(77%), Positives:68/74(91%), Gaps:0/74(0%) Query 2 VSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQRV 61 ++VQTHGES+L NKK AW+DSTKATRYL+KTE+WI+RNPGYA +AA +GWMLGSN+ QRV Sbjct 217 LTVQTHGESTLSNKKGAWMDSTKATRYLVKTESWILRNPGYALVAAVIGWMLGSNTMQRV 276 Query 62 VFTILLLLVAPAYS 75 VF +LLLLVAPAYS Sbjct 277 VFAVLLLLVAPAYS 290 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=NS5 [Tembusu virus] Sequence ID: G1CRV4.1 Length: 3425 Range 1: 214 to 287 Score:97.8 bits(242), Expect:2e-24, Method:Compositional matrix adjust., Identities:43/74(58%), Positives:55/74(74%), Gaps:0/74(0%) Query 2 VSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQRV 61 V+V HGES L K W+DSTKAT+YL K ENW +RNPGYA A +GW LG+ Q++ Sbjct 214 VNVHHHGESLLEAKNTPWMDSTKATKYLTKVENWALRNPGYALAAIFIGWNLGTTRSQKI 273 Query 62 VFTILLLLVAPAYS 75 +FTI+L+L+APAYS Sbjct 274 IFTIMLMLIAPAYS 287 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=NS5 [Kokobera virus] Sequence ID: Q32ZD5.1 Length: 3410 Range 1: 214 to 286 Score:90.9 bits(224), Expect:5e-22, Method:Compositional matrix adjust., Identities:37/73(51%), Positives:56/73(76%), Gaps:0/73(0%) Query 3 SVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQRVV 62 ++ H +S L ++ W+D+ KAT YL K E+W +RNPGYA +AA LGW LG+++ Q+V+ Sbjct 214 NIAGHADSRLDSRGSVWMDTKKATSYLTKAESWALRNPGYALVAAVLGWSLGTSNAQKVI 273 Query 63 FTILLLLVAPAYS 75 FT+++LL+APAYS Sbjct 274 FTVMILLIAPAYS 286 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Ilheus virus] Sequence ID: Q32ZD7.1 Length: 3424 Range 1: 211 to 285 Score:90.1 bits(222), Expect:9e-22, Method:Compositional matrix adjust., Identities:44/75(59%), Positives:59/75(78%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 ++++ HGES L N+ W+D+TK T+YL K ENW+IRNPGYA +A A WMLGSN+ QR Sbjct 211 AINIPHHGESHLENRATPWMDTTKTTKYLTKVENWVIRNPGYALVALATAWMLGSNTPQR 270 Query 61 VVFTILLLLVAPAYS 75 VVF I+++L+APAYS Sbjct 271 VVFMIMMMLIAPAYS 285 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=NS5 [Bussuquara virus] Sequence ID: Q32ZE0.1 Length: 3429 Range 1: 224 to 292 Score:87.4 bits(215), Expect:8e-21, Method:Compositional matrix adjust., Identities:36/69(52%), Positives:52/69(75%), Gaps:0/69(0%) Query 7 HGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQRVVFTIL 66 H E+ L ++E W+++ ++L+K E W +RNPG+A +A LGWMLGSN Q+++FTIL Sbjct 224 HTENVLATRQETWMNTDVIMKHLIKVETWALRNPGFALVAITLGWMLGSNRSQKIIFTIL 283 Query 67 LLLVAPAYS 75 LLLVAPAY+ Sbjct 284 LLLVAPAYN 292 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Capsid protein; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; AltName: Full=Precursor membrane protein; Contains: RecName: Full=Peptide pr; AltName: Full=Peptide precursor; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=NS5 [Zika virus] Sequence ID: Q32ZE1.1 Length: 3419 Range 1: 216 to 290 Score:85.5 bits(210), Expect:3e-20, Method:Compositional matrix adjust., Identities:33/75(44%), Positives:57/75(76%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 +V++ +H L + + WL+S + T++L+K ENWI RNPG+A +A A+ W+LGS++ Q+ Sbjct 216 AVTLPSHSTRKLQTRSQTWLESREYTKHLIKVENWIFRNPGFALVAVAIAWLLGSSTSQK 275 Query 61 VVFTILLLLVAPAYS 75 V++ +++LL+APAYS Sbjct 276 VIYLVMILLIAPAYS 290 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Dengue virus 4 Thailand/0348/1991] Sequence ID: Q2YHF0.1 Length: 3387 Range 1: 205 to 278 Score:70.5 bits(171), Expect:6e-15, Method:Compositional matrix adjust., Identities:31/74(42%), Positives:47/74(63%), Gaps:0/74(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L + E W+ S A ++ + E+WI+RNPG+A LA + +M+G QR Sbjct 205 SVALTPHSGMGLETRAETWMSSEGAWKHAQRVESWILRNPGFALLAGFMAYMIGQTGIQR 264 Query 61 VVFTILLLLVAPAY 74 VF IL++LVAP+Y Sbjct 265 TVFFILMMLVAPSY 278 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Dengue virus 4 Singapore/8976/1995] Sequence ID: Q5UCB8.1 Length: 3387 Range 1: 205 to 278 Score:70.1 bits(170), Expect:1e-14, Method:Compositional matrix adjust., Identities:30/74(41%), Positives:47/74(63%), Gaps:0/74(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L + E W+ S A ++ + E+WI+RNPG+A LA + +M+G QR Sbjct 205 SVALTPHSGMGLETRAETWMSSEGAWKHAQRVESWILRNPGFALLAGFMAYMIGQTGIQR 264 Query 61 VVFTILLLLVAPAY 74 VF +L++LVAP+Y Sbjct 265 TVFFVLMMLVAPSY 278 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Dengue virus 4 Philippines/H241/1956] Sequence ID: Q58HT7.1 Length: 3387 Range 1: 205 to 278 Score:70.1 bits(170), Expect:1e-14, Method:Compositional matrix adjust., Identities:30/74(41%), Positives:47/74(63%), Gaps:0/74(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L + E W+ S A ++ + E+WI+RNPG+A LA + +M+G QR Sbjct 205 SVALTPHSGMGLETRAETWMSSEGAWKHAQRVESWILRNPGFALLAGFMAYMIGQTGIQR 264 Query 61 VVFTILLLLVAPAY 74 VF +L++LVAP+Y Sbjct 265 TVFFVLMMLVAPSY 278 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Dengue virus 4 Dominica/814669/1981] Sequence ID: P09866.2 Length: 3387 Range 1: 205 to 278 Score:70.1 bits(170), Expect:1e-14, Method:Compositional matrix adjust., Identities:30/74(41%), Positives:47/74(63%), Gaps:0/74(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L + E W+ S A ++ + E+WI+RNPG+A LA + +M+G QR Sbjct 205 SVALTPHSGMGLETRAETWMSSEGAWKHAQRVESWILRNPGFALLAGFMAYMIGQTGIQR 264 Query 61 VVFTILLLLVAPAY 74 VF +L++LVAP+Y Sbjct 265 TVFFVLMMLVAPSY 278 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Dengue virus 4 Thailand/0476/1997] Sequence ID: Q2YHF2.1 Length: 3387 Range 1: 205 to 278 Score:69.7 bits(169), Expect:1e-14, Method:Compositional matrix adjust., Identities:30/74(41%), Positives:47/74(63%), Gaps:0/74(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L + E W+ S A ++ + E+WI+RNPG+A LA + +M+G QR Sbjct 205 SVALTPHSGMGLETRAETWMSSEGAWKHAQRVESWILRNPGFALLAGFMAYMIGQTGIQR 264 Query 61 VVFTILLLLVAPAY 74 VF +L++LVAP+Y Sbjct 265 TVFFVLMMLVAPSY 278 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Capsid protein; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; AltName: Full=Precursor membrane protein; Contains: RecName: Full=Peptide pr; AltName: Full=Peptide precursor; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=NS5 [Zika virus ZIKV/Human/Cambodia/FSS13025/2010] Sequence ID: A0A142I5B9.1 Length: 3423 Range 1: 216 to 290 Score:68.9 bits(167), Expect:3e-14, Method:Compositional matrix adjust., Identities:33/75(44%), Positives:57/75(76%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 +V++ +H L + + WL+S + T++L++ ENWI RNPG+A AAA+ W+LGS++ Q+ Sbjct 216 AVTLPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQK 275 Query 61 VVFTILLLLVAPAYS 75 V++ +++LL+APAYS Sbjct 276 VIYLVMILLIAPAYS 290 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Capsid protein; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; AltName: Full=Precursor membrane protein; Contains: RecName: Full=Peptide pr; AltName: Full=Peptide precursor; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=NS5 [Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013] Sequence ID: A0A024B7W1.1 Length: 3423 Range 1: 216 to 290 Score:68.9 bits(167), Expect:3e-14, Method:Compositional matrix adjust., Identities:33/75(44%), Positives:57/75(76%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 +V++ +H L + + WL+S + T++L++ ENWI RNPG+A AAA+ W+LGS++ Q+ Sbjct 216 AVTLPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQK 275 Query 61 VVFTILLLLVAPAYS 75 V++ +++LL+APAYS Sbjct 276 VIYLVMILLIAPAYS 290 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A [Yellow fever virus 1899/81] Sequence ID: P29165.1 Length: 1163 Range 1: 211 to 285 Score:68.2 bits(165), Expect:4e-14, Method:Composition-based stats., Identities:30/75(40%), Positives:45/75(60%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 ++ + TH L ++E W+ R L K E W++RNP +A A A+ +++GSN QR Sbjct 211 AIDLPTHENHGLKTRQEKWMTGRMGERQLQKIERWLVRNPFFAVTALAIAYLVGSNMTQR 270 Query 61 VVFTILLLLVAPAYS 75 VV +L+L V PAYS Sbjct 271 VVIALLVLAVGPAYS 285 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Non-structural protein 2A-alpha; Short=NS2A-alpha; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Yellow fever virus isolate Ivory Coast/85-82H/1982] Sequence ID: Q98803.1 Length: 3411 Range 1: 211 to 285 Score:68.2 bits(165), Expect:5e-14, Method:Compositional matrix adjust., Identities:30/75(40%), Positives:45/75(60%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 ++ + TH L ++E W+ R L K E W++RNP +A A A+ +++GSN QR Sbjct 211 AIDLPTHENHGLKTRQEKWMTGRMGERQLQKIERWLVRNPFFAVTALAIAYLVGSNMTQR 270 Query 61 VVFTILLLLVAPAYS 75 VV +L+L V PAYS Sbjct 271 VVIALLVLAVGPAYS 285 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Non-structural protein 2A-alpha; Short=NS2A-alpha; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Yellow fever virus isolate Angola/14FA/1971] Sequence ID: Q1X881.1 Length: 3412 Range 1: 211 to 285 Score:67.8 bits(164), Expect:5e-14, Method:Compositional matrix adjust., Identities:29/75(39%), Positives:46/75(61%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 ++ + TH L ++E W+ R L K E W++RNP +A A A+ +++G+N+ QR Sbjct 211 AIDLPTHENHGLKTRQEKWMTGRMGERQLQKIERWLVRNPFFAVTALAIAYLVGNNTTQR 270 Query 61 VVFTILLLLVAPAYS 75 VV +L+L V PAYS Sbjct 271 VVIALLVLAVGPAYS 285 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Non-structural protein 2A-alpha; Short=NS2A-alpha; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Yellow fever virus isolate Uganda/A7094A4/1948] Sequence ID: Q1X880.1 Length: 3412 Range 1: 211 to 285 Score:67.4 bits(163), Expect:7e-14, Method:Compositional matrix adjust., Identities:29/75(39%), Positives:45/75(60%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 ++ + TH L ++E W+ R L K E W++RNP +A A A+ +++G+N QR Sbjct 211 AIDLPTHENHGLKTRQEKWMTGRMGERQLQKIERWLVRNPFFAVTALAIAYLVGNNKTQR 270 Query 61 VVFTILLLLVAPAYS 75 VV +L+L V PAYS Sbjct 271 VVIALLVLAVGPAYS 285 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Non-structural protein 2A-alpha; Short=NS2A-alpha; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Yellow fever virus isolate Ethiopia/Couma/1961] Sequence ID: Q074N0.1 Length: 3412 Range 1: 211 to 285 Score:67.0 bits(162), Expect:1e-13, Method:Compositional matrix adjust., Identities:29/75(39%), Positives:45/75(60%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 ++ + TH L ++E W+ R L K E W++RNP +A A A+ +++G+N QR Sbjct 211 AIDLPTHENHGLKTRQEKWMAGRMGERQLQKIERWLVRNPFFAITALAIAYLVGNNMTQR 270 Query 61 VVFTILLLLVAPAYS 75 VV +L+L V PAYS Sbjct 271 VVIALLVLAVGPAYS 285 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Non-structural protein 2A-alpha; Short=NS2A-alpha; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Yellow fever virus strain Ghana/Asibi/1927] Sequence ID: Q6DV88.1 Length: 3411 Range 1: 211 to 285 Score:66.6 bits(161), Expect:2e-13, Method:Compositional matrix adjust., Identities:29/75(39%), Positives:44/75(58%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 ++ + TH L ++E W+ R L K E W++RNP +A A + +++GSN QR Sbjct 211 AIDLPTHENHGLKTRQEKWMTGRMGERQLQKIERWLVRNPFFAVTALTIAYLVGSNMTQR 270 Query 61 VVFTILLLLVAPAYS 75 VV +L+L V PAYS Sbjct 271 VVIALLVLAVGPAYS 285 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Non-structural protein 2A-alpha; Short=NS2A-alpha; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Yellow fever virus isolate Ivory Coast/1999] Sequence ID: Q6J3P1.1 Length: 3411 Range 1: 211 to 285 Score:66.6 bits(161), Expect:2e-13, Method:Compositional matrix adjust., Identities:29/75(39%), Positives:44/75(58%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 ++ + TH L ++E W+ R L K E W++RNP +A A + +++GSN QR Sbjct 211 AIDLPTHENHGLKTRQEKWMTGRMGERQLQKIERWLVRNPFFAVTALTIAYLVGSNMTQR 270 Query 61 VVFTILLLLVAPAYS 75 VV +L+L V PAYS Sbjct 271 VVIALLVLAVGPAYS 285 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Non-structural protein 2A-alpha; Short=NS2A-alpha; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Wesselsbron virus] Sequence ID: C5H431.1 Length: 3405 Range 1: 209 to 280 Score:66.2 bits(160), Expect:2e-13, Method:Compositional matrix adjust., Identities:31/72(43%), Positives:44/72(61%), Gaps:0/72(0%) Query 4 VQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQRVVF 63 + H + L ++E WL + + L K E WI+RNP YA A AL + +G+++ QRVV Sbjct 209 ITPHVDKGLTTRQEKWLPTKIGEQQLQKVEKWIMRNPLYALGAVALAYFVGTSNVQRVVI 268 Query 64 TILLLLVAPAYS 75 ILLL + PAYS Sbjct 269 AILLLGIGPAYS 280 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Non-structural protein 2A-alpha; Short=NS2A-alpha; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Yellow fever virus 17D] Sequence ID: P03314.1 Length: 3411 Range 1: 211 to 285 Score:65.9 bits(159), Expect:3e-13, Method:Compositional matrix adjust., Identities:29/75(39%), Positives:43/75(57%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 ++ + TH L ++E W+ R L K E W +RNP +A A + +++GSN QR Sbjct 211 AIDLPTHENHGLKTRQEKWMTGRMGERQLQKIERWFVRNPFFAVTALTIAYLVGSNMTQR 270 Query 61 VVFTILLLLVAPAYS 75 VV +L+L V PAYS Sbjct 271 VVIALLVLAVGPAYS 285 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Non-structural protein 2A-alpha; Short=NS2A-alpha; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Yellow fever virus Trinidad/79A/1979] Sequence ID: Q9YRV3.1 Length: 3411 Range 1: 211 to 285 Score:65.9 bits(159), Expect:3e-13, Method:Compositional matrix adjust., Identities:29/75(39%), Positives:43/75(57%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 ++ + TH L ++E W+ R L K E W +RNP +A A + +++GSN QR Sbjct 211 AIDLPTHENHGLKTRQEKWMTGRMGERQLQKIERWFVRNPFFAVTALTIAYLVGSNMTQR 270 Query 61 VVFTILLLLVAPAYS 75 VV +L+L V PAYS Sbjct 271 VVIALLVLAVGPAYS 285 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Non-structural protein 2A-alpha; Short=NS2A-alpha; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Yellow fever virus strain French neurotropic vaccine] Sequence ID: Q89277.2 Length: 3411 Range 1: 211 to 285 Score:65.9 bits(159), Expect:3e-13, Method:Compositional matrix adjust., Identities:29/75(39%), Positives:43/75(57%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 ++ + TH L ++E W+ R L K E W +RNP +A A + +++GSN QR Sbjct 211 AIDLPTHENHGLKTRQEKWMTGRMGERQLQKIERWFVRNPFFAVTALTIAYLVGSNMTQR 270 Query 61 VVFTILLLLVAPAYS 75 VV +L+L V PAYS Sbjct 271 VVIALLVLAVGPAYS 285 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Non-structural protein 2A-alpha; Short=NS2A-alpha; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Edge Hill virus] Sequence ID: C8XPB2.1 Length: 3401 Range 1: 210 to 281 Score:61.2 bits(147), Expect:1e-11, Method:Compositional matrix adjust., Identities:25/72(35%), Positives:43/72(59%), Gaps:0/72(0%) Query 4 VQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQRVVF 63 + H + L ++E WL ++ R + + E W++RNP YA ++ L W +GS+ Q+V+ Sbjct 210 ITAHIDKGLTTRQEKWLSTSMGERQIQRIERWMMRNPFYAAISLLLAWWVGSDIKQKVLI 269 Query 64 TILLLLVAPAYS 75 L+L + PAYS Sbjct 270 AFLVLAIGPAYS 281 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Non-structural protein 2A-alpha; Short=NS2A-alpha; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Banzi virus] Sequence ID: C8XPA8.1 Length: 3393 Range 1: 198 to 272 Score:59.7 bits(143), Expect:4e-11, Method:Compositional matrix adjust., Identities:31/75(41%), Positives:43/75(57%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 +V + H + L KKE WL S+ + K E WIIRNP YA A + W +G++ QR Sbjct 198 AVVITAHLDQGLTTKKETWLGSSHFETQVQKVEKWIIRNPTYAIAAILMSWYIGNSLKQR 257 Query 61 VVFTILLLLVAPAYS 75 VV +L L + PAY+ Sbjct 258 VVLLLLTLALGPAYA 272 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Dengue virus 2 Peru/IQT2913/1996] Sequence ID: Q9WDA6.1 Length: 3391 Range 1: 206 to 280 Score:56.2 bits(134), Expect:7e-10, Method:Compositional matrix adjust., Identities:26/75(35%), Positives:44/75(58%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L + E W+ S A ++ + E WI+R+PG+ +AA L + +G+ QR Sbjct 206 SVALVPHVGMGLETRTETWMSSEGAWKHAQRIETWILRHPGFTIMAAILAYTIGTTHFQR 265 Query 61 VVFTILLLLVAPAYS 75 V+ ILL +AP+ + Sbjct 266 VLIFILLTAIAPSMT 280 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Dengue virus 2 Puerto Rico/PR159-S1/1969] Sequence ID: P12823.1 Length: 3388 Range 1: 206 to 280 Score:56.2 bits(134), Expect:7e-10, Method:Compositional matrix adjust., Identities:26/75(35%), Positives:44/75(58%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L + E W+ S A ++ + E WI+R+PG+ +AA L + +G+ QR Sbjct 206 SVALVPHVGMGLETRTETWMSSEGAWKHAQRIETWILRHPGFTIMAAILAYTIGTTHFQR 265 Query 61 VVFTILLLLVAPAYS 75 V+ ILL +AP+ + Sbjct 266 VLIFILLTAIAPSMT 280 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Dengue virus 2 Jamaica/1409/1983] Sequence ID: P07564.2 Length: 3391 Range 1: 206 to 280 Score:55.8 bits(133), Expect:9e-10, Method:Compositional matrix adjust., Identities:26/75(35%), Positives:44/75(58%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L + E W+ S A +++ + E WI+R+PG+ +AA L + +G+ QR Sbjct 206 SVALVPHVGMGLETRTETWMSSEGAWKHVQRIETWILRHPGFTIMAAILAYTIGTTHFQR 265 Query 61 VVFTILLLLVAPAYS 75 + ILL VAP+ + Sbjct 266 ALIFILLTAVAPSMT 280 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1 [Dengue virus 2 Thailand/PUO-218/1980] Sequence ID: P18356.2 Length: 679 Range 1: 106 to 180 Score:55.8 bits(133), Expect:1e-09, Method:Composition-based stats., Identities:26/75(35%), Positives:43/75(57%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L + E W+ S A ++ + E WI+R+PG+ +AA L + +G+ QR Sbjct 106 SVALVPHVGMGLETRTETWMSSEGAWKHAQRIEIWILRHPGFTIMAAILAYTIGTTHFQR 165 Query 61 VVFTILLLLVAPAYS 75 + ILL VAP+ + Sbjct 166 ALIFILLTAVAPSMT 180 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Dengue virus 2 Thailand/NGS-C/1944] Sequence ID: P14340.2 Length: 3391 Range 1: 206 to 280 Score:55.1 bits(131), Expect:2e-09, Method:Compositional matrix adjust., Identities:26/75(35%), Positives:43/75(57%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L + E W+ S A ++ + E WI+R+PG+ +AA L + +G+ QR Sbjct 206 SVALVPHVGMGLETRTETWMSSEGAWKHAQRIETWILRHPGFTIMAAILAYTIGTTHFQR 265 Query 61 VVFTILLLLVAPAYS 75 + ILL VAP+ + Sbjct 266 ALIFILLTAVAPSMT 280 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Dengue virus 2 Thailand/0168/1979] Sequence ID: P14337.2 Length: 3391 Range 1: 206 to 280 Score:55.1 bits(131), Expect:2e-09, Method:Compositional matrix adjust., Identities:26/75(35%), Positives:43/75(57%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L + E W+ S A ++ + E WI+R+PG+ +AA L + +G+ QR Sbjct 206 SVALVPHVGMGLETRTETWMSSEGAWKHAQRIETWILRHPGFTIMAAILAYTIGTTHFQR 265 Query 61 VVFTILLLLVAPAYS 75 + ILL VAP+ + Sbjct 266 ALIFILLTAVAPSMT 280 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Dengue virus 2 16681-PDK53] Sequence ID: P29991.1 Length: 3391 Range 1: 206 to 280 Score:54.7 bits(130), Expect:3e-09, Method:Compositional matrix adjust., Identities:25/75(33%), Positives:43/75(57%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L + E W+ S A +++ + E WI+R+PG+ +AA L + +G+ QR Sbjct 206 SVALVPHVGMGLETRTETWMSSEGAWKHVQRIETWILRHPGFTMMAAILAYTIGTTHFQR 265 Query 61 VVFTILLLLVAPAYS 75 + ILL V P+ + Sbjct 266 ALILILLTAVTPSMT 280 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Dengue virus 2 Thailand/16681/84] Sequence ID: P29990.1 Length: 3391 Range 1: 206 to 280 Score:54.3 bits(129), Expect:4e-09, Method:Compositional matrix adjust., Identities:25/75(33%), Positives:43/75(57%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L + E W+ S A +++ + E WI+R+PG+ +AA L + +G+ QR Sbjct 206 SVALVPHVGMGLETRTETWMSSEGAWKHVQRIETWILRHPGFTMMAAILAYTIGTTHFQR 265 Query 61 VVFTILLLLVAPAYS 75 + ILL V P+ + Sbjct 266 ALIFILLTAVTPSMT 280 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Dengue virus 3 Philippines/H87/1956] Sequence ID: P27915.1 Length: 3390 Range 1: 206 to 280 Score:52.0 bits(123), Expect:2e-08, Method:Compositional matrix adjust., Identities:26/75(35%), Positives:43/75(57%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L + + W+ + A R + K E W +R+PG+ LA L +G++ Q+ Sbjct 206 SVALAPHVGMGLDTRTQTWMSAEGAWRQVEKVETWALRHPGFTILALFLAHYIGTSLTQK 265 Query 61 VVFTILLLLVAPAYS 75 VV ILL+LV P+ + Sbjct 266 VVIFILLMLVTPSMT 280 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Dengue virus 3 China/80-2/1980] Sequence ID: Q99D35.1 Length: 3390 Range 1: 206 to 280 Score:52.0 bits(123), Expect:2e-08, Method:Compositional matrix adjust., Identities:26/75(35%), Positives:43/75(57%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L + + W+ + A R + K E W +R+PG+ LA L +G++ Q+ Sbjct 206 SVALAPHVGMGLDTRTQTWMSAEGAWRQVEKVETWALRHPGFTILALFLAHYIGTSLTQK 265 Query 61 VVFTILLLLVAPAYS 75 VV ILL+LV P+ + Sbjct 266 VVIFILLMLVTPSMT 280 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Dengue virus 3 Singapore/8120/1995] Sequence ID: Q5UB51.1 Length: 3390 Range 1: 206 to 280 Score:52.0 bits(123), Expect:2e-08, Method:Compositional matrix adjust., Identities:26/75(35%), Positives:43/75(57%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L + + W+ + A R + K E W +R+PG+ LA L +G++ Q+ Sbjct 206 SVALAPHVGMGLDTRTQTWMSAEGAWRQVEKVETWALRHPGFTILALFLAHYIGTSLTQK 265 Query 61 VVFTILLLLVAPAYS 75 VV ILL+LV P+ + Sbjct 266 VVIFILLMLVTPSMT 280 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Dengue virus 3 Sri Lanka/1266/2000] Sequence ID: Q6YMS4.1 Length: 3390 Range 1: 206 to 280 Score:52.0 bits(123), Expect:2e-08, Method:Compositional matrix adjust., Identities:26/75(35%), Positives:43/75(57%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L + + W+ + A R + K E W +R+PG+ LA L +G++ Q+ Sbjct 206 SVALAPHVGMGLDTRTQTWMSAEGAWRQVEKVETWALRHPGFTILALFLAHYIGTSLTQK 265 Query 61 VVFTILLLLVAPAYS 75 VV ILL+LV P+ + Sbjct 266 VVIFILLMLVTPSMT 280 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Dengue virus 3 Martinique/1243/1999] Sequence ID: Q6YMS3.1 Length: 3390 Range 1: 206 to 280 Score:52.0 bits(123), Expect:3e-08, Method:Compositional matrix adjust., Identities:26/75(35%), Positives:43/75(57%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L + + W+ + A R + K E W +R+PG+ LA L +G++ Q+ Sbjct 206 SVALAPHVGMGLDTRTQTWMSAEGAWRQVEKVETWALRHPGFTILALFLAHYIGTSLTQK 265 Query 61 VVFTILLLLVAPAYS 75 VV ILL+LV P+ + Sbjct 266 VVIFILLMLVTPSMT 280 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1 [Dengue virus 2 China/D2-04] Sequence ID: P30026.1 Length: 1127 Range 1: 206 to 280 Score:50.4 bits(119), Expect:7e-08, Method:Composition-based stats., Identities:25/75(33%), Positives:40/75(53%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L E W+ S A + + E WI+R+PG+ +AA L + +G+ QR Sbjct 206 SVALVPHVGMGLETGTETWMSSDGAWKRACRMETWILRHPGFTIMAAILAYTIGTTHFQR 265 Query 61 VVFTILLLLVAPAYS 75 + IL VAP+ + Sbjct 266 GLILILQTAVAPSMT 280 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1 [Dengue virus 1 Thailand/AHF 82-80/1980] Sequence ID: P27912.1 Length: 792 Range 1: 206 to 280 Score:49.7 bits(117), Expect:2e-07, Method:Composition-based stats., Identities:23/75(31%), Positives:41/75(54%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L + E W+ S A + + K E W +R+PG+ + L +G++ Q+ Sbjct 206 SVALDPHVGLGLETRTETWMSSEGAWKQIQKVETWALRHPGFTVIGLFLAHAIGTSITQK 265 Query 61 VVFTILLLLVAPAYS 75 + ILL+LV P+ + Sbjct 266 GIIFILLMLVTPSMA 280 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Non-structural protein 2A-alpha; Short=NS2A-alpha; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Dengue virus 1 Brazil/97-11/1997] Sequence ID: P27909.2 Length: 3392 Range 1: 206 to 280 Score:49.3 bits(116), Expect:2e-07, Method:Compositional matrix adjust., Identities:24/75(32%), Positives:42/75(56%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L + E W+ S A + + K E W +R+PG+ +A L +G++ Q+ Sbjct 206 SVALAPHVGLGLETRTETWMSSEGAWKQIQKVETWALRHPGFTVIALFLAHAIGTSITQK 265 Query 61 VVFTILLLLVAPAYS 75 + ILL+LV P+ + Sbjct 266 GIIFILLMLVTPSMA 280 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Capsid protein; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; AltName: Full=Precursor membrane protein; Contains: RecName: Full=Peptide pr; AltName: Full=Peptide precursor; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Dengue virus 1 Nauru/West Pac/1974] Sequence ID: P17763.2 Length: 3392 Range 1: 206 to 280 Score:49.3 bits(116), Expect:2e-07, Method:Compositional matrix adjust., Identities:24/75(32%), Positives:42/75(56%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L + E W+ S A + + K E W +R+PG+ +A L +G++ Q+ Sbjct 206 SVALAPHVGLGLETRTETWMSSEGAWKQIQKVETWALRHPGFTVIALFLAHAIGTSITQK 265 Query 61 VVFTILLLLVAPAYS 75 + ILL+LV P+ + Sbjct 266 GIIFILLMLVTPSMA 280 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1 [Dengue virus 1 Jamaica/CV1636/1977] Sequence ID: P27913.1 Length: 791 Range 1: 206 to 280 Score:49.3 bits(116), Expect:2e-07, Method:Composition-based stats., Identities:23/75(31%), Positives:41/75(54%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L + E W+ S A + + K E W +R+PG+ + L +G++ Q+ Sbjct 206 SVALAPHVGLGLETRTETWMSSEGAWKQIQKVETWALRHPGFTVIGLFLAHAIGTSITQK 265 Query 61 VVFTILLLLVAPAYS 75 + ILL+LV P+ + Sbjct 266 GIIFILLMLVTPSMA 280 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Dengue virus 1 Singapore/S275/1990] Sequence ID: P33478.2 Length: 3391 Range 1: 206 to 280 Score:48.1 bits(113), Expect:5e-07, Method:Compositional matrix adjust., Identities:23/75(31%), Positives:42/75(56%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV++ H L + E W+ S A + + + E W +R+PG+ +A L +G++ Q+ Sbjct 206 SVALAPHVGLGLETRTETWMSSEGAWKQIQRVETWALRHPGFTVIALFLAHAIGTSITQK 265 Query 61 VVFTILLLLVAPAYS 75 + ILL+LV P+ + Sbjct 266 GIIFILLMLVTPSMA 280 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1 [Dengue virus 2 Thailand/TH-36/1958] Sequence ID: P29984.1 Length: 555 Range 1: 1 to 49 Score:45.1 bits(105), Expect:7e-06, Method:Composition-based stats., Identities:18/49(37%), Positives:31/49(63%), Gaps:0/49(0%) Query 27 RYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQRVVFTILLLLVAPAYS 75 ++ + E WI+R+PG+ +AA L + +G+ QR + ILL VAP+ + Sbjct 1 KHAQRIETWILRHPGFTIMAAILAYTIGTTHFQRALIFILLTAVAPSMT 49 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease/helicase NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Omsk hemorrhagic fever virus] Sequence ID: Q7T6D2.1 Length: 3414 Range 1: 206 to 280 Score:44.3 bits(103), Expect:1e-05, Method:Compositional matrix adjust., Identities:20/75(27%), Positives:36/75(48%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV + +H + L + + WL+ +L + E W+ +N + WM ++ R Sbjct 206 SVLIPSHAQKDLTGRGQRWLEGDTIRSHLTRVEGWVWKNKSLTLAVVVIVWMTVESAVTR 265 Query 61 VVFTILLLLVAPAYS 75 +V LL +APAY+ Sbjct 266 IVIVSALLCLAPAYA 280 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease/helicase NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Alkhumra hemorrhagic fever virus] Sequence ID: Q91B85.1 Length: 3416 Range 1: 207 to 281 Score:41.6 bits(96), Expect:1e-04, Method:Compositional matrix adjust., Identities:20/75(27%), Positives:33/75(44%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SVS+ H S L + WL +L + E W+ +N A+ WM+ + R Sbjct 207 SVSIPVHAHSDLTGRGHKWLRGDSVKTHLTRVEGWVWKNKLLTMAFCAVVWMVTDSLPTR 266 Query 61 VVFTILLLLVAPAYS 75 + + L +AP Y+ Sbjct 267 FIVITVALCLAPTYA 281 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease/helicase NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=Non-structural protein 5 [Kyasanur Forest disease virus] Sequence ID: D7RF80.1 Length: 3416 Range 1: 207 to 281 Score:41.2 bits(95), Expect:1e-04, Method:Compositional matrix adjust., Identities:20/75(27%), Positives:33/75(44%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SVS+ H S L + WL +L + E W+ +N A+ WM+ + R Sbjct 207 SVSIPVHAHSDLTGRGHKWLKGDSVKTHLTRVEGWVWKNKFLTAAFCAVVWMVTDSLPTR 266 Query 61 VVFTILLLLVAPAYS 75 + + L +AP Y+ Sbjct 267 FIVITVALCLAPTYA 281 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease/helicase NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=NS5 [Tick-borne powassan virus (strain lb)] Sequence ID: Q04538.1 Length: 3415 Range 1: 204 to 278 Score:40.4 bits(93), Expect:2e-04, Method:Compositional matrix adjust., Identities:20/75(27%), Positives:35/75(46%), Gaps:0/75(0%) Query 1 SVSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQR 60 SV + TH + +V + AWL ++ + E W+ +N AL W++ + R Sbjct 204 SVVIPTHAQKDMVGRGHAWLKGDNIRDHVTRVEGWMWKNKLLTAAIVALAWLMVDSWMAR 263 Query 61 VVFTILLLLVAPAYS 75 V +L L + P Y+ Sbjct 264 VTVILLALSLGPVYA 278 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E [Langat virus (strain Yelantsev)] Sequence ID: P29838.2 Length: 776 Range 1: 207 to 280 Score:40.0 bits(92), Expect:4e-04, Method:Composition-based stats., Identities:15/74(20%), Positives:34/74(45%), Gaps:0/74(0%) Query 2 VSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQRV 61 V + +H + L + WL+ +L + E W+ +N + + W++ R+ Sbjct 207 VLIPSHAQRDLTGRGHQWLEGEAVKAHLTRVEGWVWKNKLFTLSLVMVAWLMVDGLLPRI 266 Query 62 VFTILLLLVAPAYS 75 + ++ L + PAY+ Sbjct 267 LIVVVALALVPAYA 280 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Peptide 2k; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=Protein prM; Contains: RecName: Full=Peptide pr; Contains: RecName: Full=Small envelope protein M; AltName: Full=Matrix protein; Contains: RecName: Full=Envelope protein E; Contains: RecName: Full=Non-structural protein 1; Short=NS1; Contains: RecName: Full=Non-structural protein 2A; Short=NS2A; Contains: RecName: Full=Serine protease subunit NS2B; AltName: Full=Flavivirin protease NS2B regulatory subunit; AltName: Full=Non-structural protein 2B; Contains: RecName: Full=Serine protease/helicase NS3; AltName: Full=Flavivirin protease NS3 catalytic subunit; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=RNA-directed RNA polymerase/Methyltransferase NS5; AltName: Full=NS5 [Langat virus (strain TP21)] Sequence ID: P29837.2 Length: 3414 Range 1: 207 to 280 Score:37.7 bits(86), Expect:0.002, Method:Compositional matrix adjust., Identities:15/74(20%), Positives:34/74(45%), Gaps:0/74(0%) Query 2 VSVQTHGESSLVNKKEAWLDSTKATRYLMKTENWIIRNPGYAFLAAALGWMLGSNSGQRV 61 V + +H + L + WL+ +L + E W+ +N + + W++ R+ Sbjct 207 VLIPSHAQRDLTGRGHQWLEGEAVKAHLTRVEGWVWKNKLFTLSLVMVAWLMVDGLLPRI 266 Query 62 VFTILLLLVAPAYS 75 + ++ L + PAY+ Sbjct 267 LIVVVALALVPAYA 280