Program FindTerm (Softberry Inc.) | Version 2.8.1
Search for Rho-independent bacterial terminators
Mode: Best terminator
Chain Start Length Score
- 846 57 -37.4
850 860 870 880 890 900
uuuuuUUUUUUUUUuuuuuuuuuuuccccccccccccggggggggggggggaaaaaaaaa
..............(((((((((..(((((((((((....)))))))))))..)))))))
910 920 930 940 950 960
aaaauuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuu
))..........................................................
GCG format:
841 u 840 842 0 841
842 u 841 843 0 842
843 u 842 844 0 843
844 u 843 845 0 844
845 u 844 846 0 845
846 u 845 847 0 846
847 u 846 848 0 847
848 u 847 849 0 848
849 u 848 850 0 849
850 u 849 851 0 850
851 u 850 852 0 851
852 u 851 853 0 852
853 u 852 854 0 853
854 u 853 855 0 854
855 u 854 856 902 855
856 u 855 857 901 856
857 u 856 858 900 857
858 u 857 859 899 858
859 u 858 860 898 859
860 u 859 861 897 860
861 u 860 862 896 861
862 u 861 863 895 862
863 u 862 864 894 863
864 u 863 865 0 864
865 u 864 866 0 865
866 c 865 867 891 866
867 c 866 868 890 867
868 c 867 869 889 868
869 c 868 870 888 869
870 c 869 871 887 870
871 c 870 872 886 871
872 c 871 873 885 872
873 c 872 874 884 873
874 c 873 875 883 874
875 c 874 876 882 875
876 c 875 877 881 876
877 c 876 878 0 877
878 g 877 879 0 878
879 g 878 880 0 879
880 g 879 881 0 880
881 g 880 882 876 881
882 g 881 883 875 882
883 g 882 884 874 883
884 g 883 885 873 884
885 g 884 886 872 885
886 g 885 887 871 886
887 g 886 888 870 887
888 g 887 889 869 888
889 g 888 890 868 889
890 g 889 891 867 890
891 g 890 892 866 891
892 a 891 893 0 892
893 a 892 894 0 893
894 a 893 895 863 894
895 a 894 896 862 895
896 a 895 897 861 896
897 a 896 898 860 897
898 a 897 899 859 898
899 a 898 900 858 899
900 a 899 901 857 900
901 a 900 902 856 901
902 a 901 903 855 902
903 a 902 904 0 903
904 a 903 905 0 904
905 u 904 906 0 905
906 u 905 907 0 906
907 u 906 908 0 907
908 u 907 909 0 908
909 u 908 910 0 909
910 u 909 911 0 910
911 u 910 912 0 911
912 u 911 913 0 912
913 u 912 914 0 913
914 u 913 915 0 914
915 u 914 916 0 915
916 u 915 917 0 916
917 u 916 918 0 917
918 u 917 919 0 918
919 u 918 920 0 919
920 u 919 921 0 920
921 u 920 922 0 921
922 u 921 923 0 922
923 u 922 924 0 923
924 u 923 925 0 924
925 u 924 926 0 925
926 u 925 927 0 926
927 u 926 928 0 927
928 u 927 929 0 928
929 u 928 930 0 929
930 u 929 931 0 930
931 u 930 932 0 931
932 u 931 933 0 932
933 u 932 934 0 933
934 u 933 935 0 934
935 u 934 936 0 935
936 u 935 937 0 936
937 u 936 938 0 937
938 u 937 939 0 938
939 u 938 940 0 939
940 u 939 941 0 940
941 u 940 942 0 941
942 u 941 943 0 942
943 u 942 944 0 943
944 u 943 945 0 944
945 u 944 946 0 945
946 u 945 947 0 946
947 u 946 948 0 947
948 u 947 949 0 948
949 u 948 950 0 949
950 u 949 951 0 950
951 u 950 952 0 951
952 u 951 953 0 952
953 u 952 954 0 953
954 u 953 955 0 954
955 u 954 956 0 955
956 u 955 957 0 956
957 u 956 958 0 957
958 u 957 959 0 958
959 u 958 960 0 959
960 u 959 961 0 960
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