RID: DVXJH7MP016 Job Title:P17265:RecName: Full=Ribosome hibernation... Program: BLASTP Query: RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Sinorhizobium meliloti 1021] ID: P17265.2(amino acid) Length: 190 Database: swissprot Non-redundant UniProtKB/SwissProt sequences Sequences producing significant alignments: Sequences with E-value BETTER than threshold Scientific Common Max Total Query E Per. Acc. Description Name Name Taxid Score Score cover Value Ident Len Accession RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Sinorhizobiu... NA 266834 397 397 100% 1e-142 100.00 190 P17265.2 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Bradyrhizobi... NA 224911 155 155 96% 8e-47 39.27 203 P30334.1 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Synechocysti... NA 1111708 68.2 68.2 96% 3e-13 24.87 191 P74518.1 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Lactococcus ... NA 416870 55.5 55.5 95% 1e-08 25.41 185 A2RIX0.1 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Picosynechoc... NA 32049 54.3 54.3 96% 3e-08 24.37 193 P47908.2 RecName: Full=Ribosome-binding factor PSRP1, chloroplastic;... Spinacia ole... spinach 3562 53.5 53.5 94% 1e-07 25.13 302 P19954.2 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Streptococcu... NA 286636 51.6 51.6 95% 3e-07 25.93 182 Q5XAQ7.1 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Bacillus sub... NA 224308 51.2 51.2 96% 5e-07 24.62 189 P28368.2 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Deinococcus ... NA 243230 49.3 49.3 96% 2e-06 24.75 191 Q9RVE7.1 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Staphylococc... NA 279808 48.9 48.9 95% 3e-06 21.99 192 Q4L4H7.1 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Staphylococc... NA 176279 47.8 47.8 95% 8e-06 20.86 189 Q5HQX7.1 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Staphylococc... NA 342451 47.0 47.0 95% 1e-05 21.28 190 Q49VV1.1 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Staphylococc... NA 367830 47.0 47.0 95% 1e-05 22.46 190 Q2FIN9.1 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Listeria mon... NA 393133 46.2 46.2 97% 2e-05 22.87 187 A0A0H3GEZ8.1 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Staphylococc... NA 93062 46.6 46.6 95% 2e-05 22.87 190 Q5HHR8.1 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Staphylococc... NA 396513 43.1 43.1 95% 4e-04 21.47 188 P47995.2 RecName: Full=Ribosome hibernation promoting factor; Short=HPF... Pseudomonas ... NA 160488 40.8 40.8 48% 7e-04 25.81 102 P0A147.1 Sequences with E-value WORSE than threshold Scientific Common Max Total Query E Per. Acc. Description Name Name Taxid Score Score cover Value Ident Len Accession RecName: Full=Ribosome hibernation promoting factor; Short=HPF... Salmonella e... NA 99287 36.2 36.2 51% 0.028 22.68 95 P26983.1 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Mycobacteriu... NA 83332 37.0 37.0 94% 0.046 23.35 219 O05886.4 Alignments: >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Sinorhizobium meliloti 1021] Sequence ID: P17265.2 Length: 190 Range 1: 1 to 190 Score:397 bits(1020), Expect:1e-142, Method:Compositional matrix adjust., Identities:190/190(100%), Positives:190/190(100%), Gaps:0/190(0%) Query 1 MSVRVSGKHMEIGDSFRVRIGEQIEQAVTKYFDGGYSSQVTVEKSGSRFSADCKLHLDTG 60 MSVRVSGKHMEIGDSFRVRIGEQIEQAVTKYFDGGYSSQVTVEKSGSRFSADCKLHLDTG Sbjct 1 MSVRVSGKHMEIGDSFRVRIGEQIEQAVTKYFDGGYSSQVTVEKSGSRFSADCKLHLDTG 60 Query 61 VVLQANGQANEPQSAFDAASERIEKRLRRYKRKLKDHHNGNGQNSTEVAYRVMDSVPFED 120 VVLQANGQANEPQSAFDAASERIEKRLRRYKRKLKDHHNGNGQNSTEVAYRVMDSVPFED Sbjct 61 VVLQANGQANEPQSAFDAASERIEKRLRRYKRKLKDHHNGNGQNSTEVAYRVMDSVPFED 120 Query 121 EEVPDDYAPTIVAETTKQLRTMSVANAVMALDMTDEPVLMFRSPGKDDLNIVYRRNDGNI 180 EEVPDDYAPTIVAETTKQLRTMSVANAVMALDMTDEPVLMFRSPGKDDLNIVYRRNDGNI Sbjct 121 EEVPDDYAPTIVAETTKQLRTMSVANAVMALDMTDEPVLMFRSPGKDDLNIVYRRNDGNI 180 Query 181 GWIDAANIKA 190 GWIDAANIKA Sbjct 181 GWIDAANIKA 190 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Bradyrhizobium diazoefficiens USDA 110] Sequence ID: P30334.1 Length: 203 Range 1: 1 to 191 Score:155 bits(391), Expect:8e-47, Method:Compositional matrix adjust., Identities:75/191(39%), Positives:115/191(60%), Gaps:7/191(3%) Query 1 MSVRVSGKHMEIGDSFRVRIGEQIEQAVTKYFDGGYSSQVTVEKSGSRFSADCKLHLDTG 60 M++R+SGK + +G++ R R+ ++ E+ + KYFDG YS +T+ K G F DC LHLD+G Sbjct 1 MTLRISGKSVSVGEALRGRVSDRTEEVLRKYFDGNYSGHITLSKDGFGFRTDCALHLDSG 60 Query 61 VVLQANGQANEPQSAFDAASERIEKRLRRYKRKLKDHH-------NGNGQNSTEVAYRVM 113 + L+A+ A + ++ D A IEKRL+RYK +LKD + +Y + Sbjct 61 ITLEADSNAPDAYASADQALVMIEKRLKRYKSRLKDRSARKAHVASAALAAMDATSYVLE 120 Query 114 DSVPFEDEEVPDDYAPTIVAETTKQLRTMSVANAVMALDMTDEPVLMFRSPGKDDLNIVY 173 EDE+ Y+P I+AE T L+ +SV+ AVM LD++ P L+F+ +NI+Y Sbjct 121 APGEGEDEDEVTGYSPVIIAEATTSLKQLSVSEAVMELDLSGAPCLVFQHGSSGRVNIIY 180 Query 174 RRNDGNIGWID 184 RR DGN+GW+D Sbjct 181 RRADGNVGWVD 191 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF; AltName: Full=Light-repressed protein A [Synechocystis sp. PCC 6803 substr. Kazusa] Sequence ID: P74518.1 Length: 191 Range 1: 1 to 185 Score:68.2 bits(165), Expect:3e-13, Method:Compositional matrix adjust., Identities:48/193(25%), Positives:99/193(51%), Gaps:18/193(9%) Query 1 MSVRVSGKHMEIGDSFRVRIGEQIEQAVTKYFDGGYSSQVTVEKSGSRFSADCKLH---- 56 M + + G ++ + ++ + E++E+AV K+F +++V V S +R + H Sbjct 1 MKLLIQGNNITVTEAIHDYVEEKVERAV-KHFQN-LTTKVDVHLSVARNARITNKHKAEV 58 Query 57 --LDTGVVLQANGQANEPQSAFDAASERIEKRLRRYKRKLKDHHNGNGQNSTEVAYRVMD 114 G V++A + ++ D +++I ++LR+YK +++D +GN + S +++ Sbjct 59 TVYANGTVIRAQEGSENLYASIDLVADKIARQLRKYKERIQDKQHGNVKTS-----EIVE 113 Query 115 SVPFEDEEVPDDYAPTIVAETTKQ----LRTMSVANAVMALDMTDEPVLMFRSPGKDDLN 170 P E E + D AP + +E + + M++ +A+ L + D MFR+ D++N Sbjct 114 DKPVE-ENLIGDRAPELPSEVLRMKYFAMPPMAIEDALEQLQLVDHDFYMFRNKDTDEIN 172 Query 171 IVYRRNDGNIGWI 183 ++Y RN G G I Sbjct 173 VIYIRNHGGYGVI 185 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF; AltName: Full=Lactococcus lactis hibernation promotion factor; Short=LIHPF [Lactococcus cremoris subsp. cremoris MG1363] Sequence ID: A2RIX0.1 Length: 185 Range 1: 6 to 184 Score:55.5 bits(132), Expect:1e-08, Method:Compositional matrix adjust., Identities:47/185(25%), Positives:88/185(47%), Gaps:10/185(5%) Query 5 VSGKHMEIGDSFRVRIGEQIEQAVTKYFDGGYSSQVTVE-KSGSRFSADCKLHLDT-GVV 62 + G+++E+ D+ R + ++I + + KYF+ G+ V K + A ++ L V Sbjct 6 IRGENVEVTDAIRAYVEDKIGK-LDKYFNDGHEVTAYVNLKVYTEKRAKVEVTLPAKNVT 64 Query 63 LQANGQANEPQSAFDAASERIEKRLRRYKRKLKDHHNGNGQNSTEVAYRVMDSVPFED-- 120 L+A + + S+ D E++E+++R+YK ++ N +N+ D D Sbjct 65 LRAEDTSQDMYSSIDFVEEKLERQIRKYKTRM----NRKPRNAVPTGQVFGDEFAPLDTT 120 Query 121 EEVPDDYAPTIVAETTKQLRTMSVANAVMALDMTDEPVLMFRSPGKDDLNIVYRRNDGNI 180 +EV +D+ IV L+ M AV+ +DM +F + ++VYRR DG Sbjct 121 DEVAEDHVD-IVRTKHVALKPMDAEEAVLQMDMLGHDFYVFTDADSNGTHVVYRRTDGRY 179 Query 181 GWIDA 185 G I+ Sbjct 180 GLIET 184 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF; AltName: Full=Dark-response protein 21; Short=DRP-21; AltName: Full=Light-repressed protein A [Picosynechococcus sp. PCC 7002] Sequence ID: P47908.2 Length: 193 Range 1: 1 to 186 Score:54.3 bits(129), Expect:3e-08, Method:Compositional matrix adjust., Identities:48/197(24%), Positives:94/197(47%), Gaps:25/197(12%) Query 1 MSVRVSGKHMEIGDSFRVRIGEQIEQAVTKYFDGGYSSQVTVEKS---GSRFSADCKLHL 57 M + + G ++ + +S + ++E+A TK+F ++++V V S +R + K + Sbjct 1 MKLLIQGNNIAVTESIHDYVESKLEKA-TKHFQT-FATKVDVHLSVANNARITDKHKAEV 58 Query 58 DT---GVVLQANGQANEPQSAFDAASERIEKRLRRYKRKLKDHHNGNGQNSTEVAYRVMD 114 G V++A + ++ D S++I ++LR+YK K N T V + + Sbjct 59 TVYANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEK-------NFGKKTHVQEKTSE 111 Query 115 SVPFEDEEVPD----DYAPTIVAETTKQ----LRTMSVANAVMALDMTDEPVLMFRSPGK 166 +P ++ VPD D AP + +E + + M++ A+ L + D MF + Sbjct 112 VLP--EDPVPDNLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNKDT 169 Query 167 DDLNIVYRRNDGNIGWI 183 + +N++Y RN G G I Sbjct 170 NAINVIYIRNHGGYGVI 186 >RecName: Full=Ribosome-binding factor PSRP1, chloroplastic; AltName: Full=30S ribosomal protein 1; AltName: Full=CS-S5; Short=CS5; AltName: Full=Plastid-specific 30S ribosomal protein 1; Short=PSrp-1; AltName: Full=Ribosomal protein 1; AltName: Full=S22; AltName: Full=Translation factor pY; Flags: Precursor [Spinacia oleracea] Sequence ID: P19954.2 Length: 302 Range 1: 79 to 277 Score:53.5 bits(127), Expect:1e-07, Method:Compositional matrix adjust., Identities:50/199(25%), Positives:91/199(45%), Gaps:20/199(10%) Query 5 VSGKHMEIGDSFRVRIGEQIEQAVTKYFDGGYSSQVTVEKSGSRFSAD-----CKLHLDT 59 + G+++E+ D+ R + +++ ++V K+ V + G S C++ L T Sbjct 79 LQGRNLEVSDNVRSHVEDKVGKSVAKHSHLVREVDVRLSARGGDLSKGPKLRRCEVTLFT 138 Query 60 GV--VLQANGQANEPQSAFDAASERIEKRLRRYKRKLKDH-HNGNGQNSTEV----AYRV 112 V++A A S+ D S I+++LR+ K K+ DH + G N ++V R+ Sbjct 139 KRHGVIRAEEDAESLYSSIDLVSSIIQRKLRKIKDKVSDHGRHMKGFNRSKVRDPEPVRI 198 Query 113 M-DSVPFEDEEVP-------DDYAPTIVAETTKQLRTMSVANAVMALDMTDEPVLMFRSP 164 + V E E P DD+ +V + +++ AV L+ D FR+ Sbjct 199 TREEVLEEVESAPAPVSVEDDDFIEEVVRTKYFDMPPLTITEAVEQLENVDHDFYAFRNE 258 Query 165 GKDDLNIVYRRNDGNIGWI 183 D+NI+Y+R +G G I Sbjct 259 ETGDINILYKRKEGGYGLI 277 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF; AltName: Full=Ribosome-associated factor Y [Streptococcus pyogenes MGAS10394] Sequence ID: Q5XAQ7.1 Length: 182 Range 1: 6 to 181 Score:51.6 bits(122), Expect:3e-07, Method:Compositional matrix adjust., Identities:49/189(26%), Positives:90/189(47%), Gaps:21/189(11%) Query 5 VSGKHMEIGDSFRVRIGEQIEQAVTKYF--DGGYSSQVTVEKSGSRFS-ADCKLHLDTGV 61 + G+++E+ ++ R + ++ + + KYF D ++V ++ R S + + LD+ V Sbjct 6 IRGENIEVTEAIRDYVESKLTK-IEKYFAKDQEIDARVNLKVYRERSSKVEVTIPLDS-V 63 Query 62 VLQANGQANEPQSAFDAASERIEKRLRRYKRKLKDHHNG---NGQNSTEVAYRVMDSVPF 118 L+A + + + D ++IE+++R+ K K+ H GQ T F Sbjct 64 TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHREKVPTGQVFT---------TEF 114 Query 119 EDEEVPDDYAPTIVAETTKQ--LRTMSVANAVMALDMTDEPVLMFRSPGKDDLNIVYRRN 176 E EEV D P + TK L+ M V A + +++ ++ NI+YRR Sbjct 115 EAEEV--DEIPEVQVVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDSEDGATNILYRRE 172 Query 177 DGNIGWIDA 185 DGN+G I+A Sbjct 173 DGNLGLIEA 181 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF; AltName: Full=Hst23; AltName: Full=Putative sigma-54 modulation protein; AltName: Full=SigL modulation protein [Bacillus subtilis subsp. subtilis str. 168] Sequence ID: P28368.2 Length: 189 Range 1: 1 to 186 Score:51.2 bits(121), Expect:5e-07, Method:Compositional matrix adjust., Identities:49/199(25%), Positives:98/199(49%), Gaps:28/199(14%) Query 1 MSVRVSGKHMEIGDSFRVRIGEQIEQAVTKYFDGGYSSQVTVEKSGSRFSADCKLHLD-- 58 M+ + G+++E+ + + + +I + + +YFD + V V +F D + ++ Sbjct 1 MNYNIRGENIEVTPALKDHVERKIGK-LERYFDHSVDADVNV---NLKFYNDKESKVEVT 56 Query 59 ---TGVVLQANGQANEPQSAFDAASERIEKRLRRYK----RKLKDHHN-----GNGQNS- 105 T + L++ + +A D A+ ++E+++R++K RK ++ + NG S Sbjct 57 IPMTDLALRSEVHNEDMYNAIDLATNKLERQIRKHKTKVNRKFREQGSPKYLLANGLGSD 116 Query 106 TEVAYRVMDSVPFEDEEVPDDYAPTIVAETTKQLRTMSVANAVMALDMTDEPVLMFRSPG 165 T++A V D + E+EE D IV + L+ M A++ ++M +F + Sbjct 117 TDIA--VQDDI--EEEESLD-----IVRQKRFNLKPMDSEEAILQMNMLGHNFFVFTNAE 167 Query 166 KDDLNIVYRRNDGNIGWID 184 + N+VYRRNDG G I+ Sbjct 168 TNLTNVVYRRNDGKYGLIE 186 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539] Sequence ID: Q9RVE7.1 Length: 191 Range 1: 5 to 191 Score:49.3 bits(116), Expect:2e-06, Method:Compositional matrix adjust., Identities:49/198(25%), Positives:97/198(48%), Gaps:26/198(13%) Query 4 RVSGKHMEIGDSFRVRIGEQIEQAVTKYFDGGYSSQVT-----VEKSGSRFSADCKLHLD 58 ++SG+++E+ + R + E++ + + +Y D ++VT V + R + +L++ Sbjct 5 QLSGRNVEVTEPMREYVEEKLSR-LDRYTDQITDARVTLTVRDVRNNERRNRVEVQLNVP 63 Query 59 TGVVLQANGQANEPQSAFDAASERIEKRLRRYK-RKLKDHHNGN-----GQNSTEVAYR- 111 G++ +A + +A D AS+ +E++LR++K R +K G G EV + Sbjct 64 GGII-RAEEHHADMYAAIDKASDVLERQLRKFKTRYMKQRQEGRPEPLPGPAEAEVNAQG 122 Query 112 ---VMDSVPFEDEEVPDDYAPTIVAETTKQLRTMSVANAVMALDMTDEPVLMFRSPGKDD 168 MD V ++ P IV + +LR MS +AV+ ++ +F+ + Sbjct 123 SGAAMDDV--------SEFHPEIVRQKRFELRPMSAEDAVVQMEALGHDFYVFQDL-QGQ 173 Query 169 LNIVYRRNDGNIGWIDAA 186 +VYRR DG+ G I ++ Sbjct 174 TGVVYRRRDGHYGLIGSS 191 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus haemolyticus JCSC1435] Sequence ID: Q4L4H7.1 Length: 192 Range 1: 6 to 191 Score:48.9 bits(115), Expect:3e-06, Method:Compositional matrix adjust., Identities:42/191(22%), Positives:87/191(45%), Gaps:14/191(7%) Query 5 VSGKHMEIGDSFRVRIGEQIEQAVTKYFDG-----GYSSQVTVEKSGSRFSADCKLHLDT 59 + G ++ I D+ R I ++I + + +YF+ + T + S ++ L Sbjct 6 IHGDNLTITDAIRNYIEDKIGK-LERYFNDVPNAVAHVKVKTYQNSTTKIEVTIPL---K 61 Query 60 GVVLQANGQANEPQSAFDAASERIEKRLRRYKRKLKDHHNGNGQNSTEVAYRVMDSVPFE 119 V L+A + ++ + D + ++E+++R+YK ++ H +G+ VA V ++ P Sbjct 62 NVTLRAEERHDDLYAGIDLVTSKLERQVRKYKTRVNRKHKTHGEPEAFVA-EVQEAPPEN 120 Query 120 DEEV----PDDYAPTIVAETTKQLRTMSVANAVMALDMTDEPVLMFRSPGKDDLNIVYRR 175 ++V +D I+ L+ M AV+ +++ +F D +IVY+R Sbjct 121 VDDVNAEPTNDSEIEIIRSKQFSLKPMDSEEAVLQMELLGHDFYIFTDRETDGTSIVYKR 180 Query 176 NDGNIGWIDAA 186 DG G I+ Sbjct 181 KDGKYGLIETT 191 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus epidermidis RP62A] Sequence ID: Q5HQX7.1 Length: 189 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus epidermidis ATCC 12228] Sequence ID: Q8CTF2.1 Length: 189 Range 1: 6 to 188 Score:47.8 bits(112), Expect:8e-06, Method:Compositional matrix adjust., Identities:39/187(21%), Positives:80/187(42%), Gaps:9/187(4%) Query 5 VSGKHMEIGDSFRVRIGEQIEQAVTKYFDG-----GYSSQVTVEKSGSRFSADCKLHLDT 59 + G ++ I D+ R I E++ + + +YF+ + T S ++ L Sbjct 6 IHGDNLTITDAIRNYIEEKVGK-LERYFNNVPNAVAHVRVKTYSNSTTKIEVTIPL---K 61 Query 60 GVVLQANGQANEPQSAFDAASERIEKRLRRYKRKLKDHHNGNGQNSTEVAYRVMDSVPFE 119 V L+A + ++ + D + ++E+++R+YK ++ H G VA + Sbjct 62 DVTLRAEERHDDLYAGIDLITNKLERQVRKYKTRVNRKHRDRGDQDIFVAEVQESTTNNH 121 Query 120 DEEVPDDYAPTIVAETTKQLRTMSVANAVMALDMTDEPVLMFRSPGKDDLNIVYRRNDGN 179 +++ + I+ L+ M AV+ +++ +F D +IVYRR DG Sbjct 122 ADDIESENDIEIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIFTDRETDGTSIVYRRKDGK 181 Query 180 IGWIDAA 186 G I+ Sbjct 182 YGLIETT 188 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292] Sequence ID: Q49VV1.1 Length: 190 Range 1: 6 to 189 Score:47.0 bits(110), Expect:1e-05, Method:Compositional matrix adjust., Identities:40/188(21%), Positives:85/188(45%), Gaps:10/188(5%) Query 5 VSGKHMEIGDSFRVRIGEQIEQAVTKYFD-----GGYSSQVTVEKSGSRFSADCKLHLDT 59 + G+++ I D+ R I E+I + + +YF+ + T + S ++ L Sbjct 6 IHGENLTITDAIRNYIEEKIGK-LERYFNDVPNATAHVKVKTYQNSATKIEVTIPLK--- 61 Query 60 GVVLQANGQANEPQSAFDAASERIEKRLRRYKRKLKDHHNGNGQNSTEVAY-RVMDSVPF 118 V L+A + ++ + D + ++E+++R+YK ++ + G+ + ++V Sbjct 62 KVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRVNRRNRNRGEQEAFASLPEEKEAVEI 121 Query 119 EDEEVPDDYAPTIVAETTKQLRTMSVANAVMALDMTDEPVLMFRSPGKDDLNIVYRRNDG 178 +++E D I+ L+ M AV+ +D+ +F D +IVY+R DG Sbjct 122 QNDENEADNEIEIIRAKNFSLKPMDSEEAVLQMDLLGHDFFIFTDRETDGTSIVYKRKDG 181 Query 179 NIGWIDAA 186 G I+ Sbjct 182 KYGLIETT 189 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF; AltName: Full=Ribosome hibernation-promoting factor [Staphylococcus aureus subsp. aureus USA300] Sequence ID: Q2FIN9.1 Length: 190 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF; AltName: Full=Hibernation promoting factor SaHPF [Staphylococcus aureus subsp. aureus NCTC 8325] Sequence ID: Q2G055.1 Length: 190 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus aureus RF122] Sequence ID: Q2YSH7.1 Length: 190 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus aureus subsp. aureus MSSA476] Sequence ID: Q6GB78.1 Length: 190 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus aureus subsp. aureus MRSA252] Sequence ID: Q6GIN9.1 Length: 190 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus aureus subsp. aureus MW2] Sequence ID: Q7A1G5.1 Length: 190 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus aureus subsp. aureus N315] Sequence ID: Q7A6R6.1 Length: 190 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus aureus subsp. aureus Mu50] Sequence ID: Q99VM3.1 Length: 190 Range 1: 6 to 188 Score:47.0 bits(110), Expect:1e-05, Method:Compositional matrix adjust., Identities:42/187(22%), Positives:78/187(41%), Gaps:9/187(4%) Query 5 VSGKHMEIGDSFRVRIGEQIEQAVTKYFDG-----GYSSQVTVEKSGSRFSADCKLHLDT 59 + G ++ I D+ R I E+I + + +YF+ + T S ++ L Sbjct 6 IHGDNLTITDAIRNYIEEKIGK-LERYFNDVPNAVAHVKVKTYSNSATKIEVTIPLK--- 61 Query 60 GVVLQANGQANEPQSAFDAASERIEKRLRRYKRKLKDHHNGNGQNSTEVAYRVMDSVPFE 119 V L+A + ++ + D + ++E+++R+YK ++ G VA Sbjct 62 NVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSRDRGDQEVFVAELQEMQETQV 121 Query 120 DEEVPDDYAPTIVAETTKQLRTMSVANAVMALDMTDEPVLMFRSPGKDDLNIVYRRNDGN 179 D + DD I+ L+ M AV+ +++ +F D +IVYRR DG Sbjct 122 DNDAYDDNEIEIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVFTDRETDGTSIVYRRKDGK 181 Query 180 IGWIDAA 186 G I + Sbjct 182 YGLIQTS 188 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF; AltName: Full=Ribosome hibernation-promoting factor [Listeria monocytogenes 10403S] Sequence ID: A0A0H3GEZ8.1 Length: 187 Range 1: 2 to 186 Score:46.2 bits(108), Expect:2e-05, Method:Compositional matrix adjust., Identities:43/188(23%), Positives:88/188(46%), Gaps:6/188(3%) Query 1 MSVRVSGKHMEIGDSFRVRIGEQIEQAVTKYFDGGYSSQVTVE-KSGSRFSADCKLHLDT 59 + + G+++E+ + R + ++I++ + +YF + V V K S +A ++ + Sbjct 2 LKYNIRGENIEVTEPIRDYVEKKIDK-LERYFTETPDANVHVNLKVYSDKNAKVEVTIPL 60 Query 60 -GVVLQANGQANEPQSAFDAASERIEKRLRRYKRKLKDHHNGNGQNSTEVAYR-VMDSVP 117 +VL+A + + ++ D +++E+++R++K K+ G AY V S P Sbjct 61 PNLVLRAEETSGDLYASIDLIVDKLERQIRKHKTKVNRKFRDKGAERDYFAYSDVNGSTP 120 Query 118 FEDEEVPDDYAPTIVAETTKQLRTMSVANAVMALDMTDEPVLMFRSPGKDDLNIVYRRND 177 E+ E D+ IV L+ M AV+ +++ ++ + NIVY R D Sbjct 121 PEENE--GDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFYVYTDAETNGTNIVYSRKD 178 Query 178 GNIGWIDA 185 G G I+ Sbjct 179 GKYGLIET 186 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus aureus subsp. aureus COL] Sequence ID: Q5HHR8.1 Length: 190 Range 1: 6 to 188 Score:46.6 bits(109), Expect:2e-05, Method:Compositional matrix adjust., Identities:43/188(23%), Positives:80/188(42%), Gaps:11/188(5%) Query 5 VSGKHMEIGDSFRVRIGEQIEQAVTKYFDG-----GYSSQVTVEKSGSRFSADCKLHLDT 59 + G ++ I D+ R I E+I + + +YF+ + T S ++ L Sbjct 6 IHGDNLTITDAIRNYIEEKIGK-LERYFNDVPNAVAHVKVKTYSNSATKIEVTIPLK--- 61 Query 60 GVVLQANGQANEPQSAFDAASERIEKRLRRYKRKLKDHHNGNGQNSTEVA-YRVMDSVPF 118 V L+A + ++ + D + ++E+++R+YK ++ G VA + M Sbjct 62 NVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSRDRGDQEVFVAELQEMQETQV 121 Query 119 EDEEVPDDYAPTIVAETTKQLRTMSVANAVMALDMTDEPVLMFRSPGKDDLNIVYRRNDG 178 D + DD I+ L+ M AV+ +++ +F D +IVYRR DG Sbjct 122 -DNDAYDDNEIEIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVFIDRETDGTSIVYRRKDG 180 Query 179 NIGWIDAA 186 G I + Sbjct 181 KYGLIQTS 188 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus carnosus subsp. carnosus TM300] Sequence ID: P47995.2 Length: 188 Range 1: 6 to 186 Score:43.1 bits(100), Expect:4e-04, Method:Compositional matrix adjust., Identities:41/191(21%), Positives:83/191(43%), Gaps:19/191(9%) Query 5 VSGKHMEIGDSFRVRIGEQIEQAVTKYFDG--GYSSQVTVE---KSGSRFSADCKLHLDT 59 + G ++ I D+ R I +++ + + +YF ++ V V+ S ++ L+ Sbjct 6 IHGDNLTITDAIRNYIEDKVGK-LERYFTNVPNVNAHVKVKTYANSSTKIEVTIPLN--- 61 Query 60 GVVLQANGQANEPQSAFDAASERIEKRLRRYKRKLKDHHNGNGQNSTEVAYRVMDSVPFE 119 V L+A + ++ + D + ++E+++R+YK ++ N + E + + P Sbjct 62 DVTLRAEERNDDLYAGIDLITNKLERQVRKYKTRV------NRKKRKESEHEPFPATPET 115 Query 120 DEEVPDDYAP----TIVAETTKQLRTMSVANAVMALDMTDEPVLMFRSPGKDDLNIVYRR 175 E D+ I+ L+ M AV+ +D+ +F D +IVYRR Sbjct 116 PPETAVDHDKDDEIEIIRSKQFSLKPMDSEEAVLQMDLLGHDFFIFNDRETDGTSIVYRR 175 Query 176 NDGNIGWIDAA 186 DG G I+ Sbjct 176 KDGKYGLIETV 186 >RecName: Full=Ribosome hibernation promoting factor; Short=HPF; AltName: Full=Hibernation factor HPF [Pseudomonas putida KT2440] Sequence ID: P0A147.1 Length: 102 >RecName: Full=Ribosome hibernation promoting factor; Short=HPF; AltName: Full=Hibernation factor HPF [Pseudomonas putida] Sequence ID: P0A148.1 Length: 102 Range 1: 1 to 91 Score:40.8 bits(94), Expect:7e-04, Method:Compositional matrix adjust., Identities:24/93(26%), Positives:53/93(56%), Gaps:2/93(2%) Query 1 MSVRVSGKHMEIGDSFRVRIGEQIEQAVTKYFDGGYSSQVTVEKSGSRFSADCKLHLDTG 60 M V +SG+H+E+ R + E++ + V +FD + QV ++ + + L + G Sbjct 1 MQVNISGQHVEVTQPLRDYVLEKLAR-VESHFDKITNVQVIMKVEKLQQKVEATLQIPGG 59 Query 61 VVLQANGQANEPQSAFDAASERIEKRLRRYKRK 93 V+ AN + + +A DA +++++++L+++K K Sbjct 60 EVV-ANAEHEDMYAAIDALADKLDRQLKKHKEK 91 >RecName: Full=Ribosome hibernation promoting factor; Short=HPF; AltName: Full=Hibernation factor HPF [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] Sequence ID: P26983.1 Length: 95 Range 1: 1 to 95 Score:36.2 bits(82), Expect:0.028, Method:Compositional matrix adjust., Identities:22/97(23%), Positives:51/97(52%), Gaps:2/97(2%) Query 1 MSVRVSGKHMEIGDSFRVRIGEQIEQAVTKYFDGGYSSQVTVEKSGSRFSADCKLHLDTG 60 M + ++G ++EI ++ R + + + + +YF+ V ++ +D LH++ G Sbjct 1 MQLNITGHNVEITEALREFVTTKFAK-LEQYFERINQVYVVLKVEKVTHISDATLHVNGG 59 Query 61 VVLQANGQANEPQSAFDAASERIEKRLRRYKRKLKDH 97 + A+ + + +A D +++ ++L R+K KLK H Sbjct 60 EI-HASAEGQDMYAAIDGLIDKLARQLTRHKDKLKQH 95 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Mycobacterium tuberculosis H37Rv] Sequence ID: O05886.4 Length: 219 Range 1: 25 to 219 Score:37.0 bits(84), Expect:0.046, Method:Compositional matrix adjust., Identities:46/197(23%), Positives:86/197(43%), Gaps:19/197(9%) Query 7 GKHMEIGDSFRVRIGEQIEQAVTKYFDGG-YSSQVTVEKSGSRFSADCKLHLDT-----G 60 G+++EI D FR+ + +++ A + FD Y V ++ +R ++ G Sbjct 25 GRNVEIPDHFRIYVSQKL--ARLERFDRTIYLFDVELDHERNRRQRKSCQRVEITARGRG 82 Query 61 VVLQANGQANEPQSAFDAASERIEKRLRRYKRKLKDHHNGNGQNSTEVAYRVM------- 113 V++ A+ +A ++A ++E RLRR K + K H+ S A V+ Sbjct 83 PVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKTPVSLAEATAVVPAPENGF 142 Query 114 DSVPFE----DEEVPDDYAPTIVAETTKQLRTMSVANAVMALDMTDEPVLMFRSPGKDDL 169 ++ P E D V + IV + MSV +A+ +++ +F + Sbjct 143 NTRPAEAHDHDGAVVEREPGRIVRTKEHPAKPMSVDDALYQMELVGHDFFLFYDKDTERP 202 Query 170 NIVYRRNDGNIGWIDAA 186 ++VYRR+ + G I A Sbjct 203 SVVYRRHAYDYGLIRLA 219