MAST - Motif Alignment and Search Tool
MAST version 4.3.0 (Release date: Sat Sep 26 01:51:56 PDT 2009)
For further information on how to interpret these results or to get
a copy of the MAST software please access http://meme.nbcr.net.
REFERENCE
If you use this program in your research, please cite:
Timothy L. Bailey and Michael Gribskov,
"Combining evidence using p-values: application to sequence homology
searches", Bioinformatics, 14(48-54), 1998.
DATABASE AND MOTIFS
DATABASE ./PF00227_seed.fasta (peptide)
Last updated on Thu May 16 17:26:05 2013
Database contains 174 sequences, 32004 residues
MOTIFS ./meme/meme.txt (peptide)
MOTIF WIDTH BEST POSSIBLE MATCH
----- ----- -------------------
1 50 GFAGSTADAFTLFERFERKLEQHPGQLMRACVELAKDWRTDKYLRRLEAM
Random model letter frequencies (from non-redundant database):
A 0.073 C 0.018 D 0.052 E 0.062 F 0.040 G 0.069 H 0.022 I 0.056 K 0.058
L 0.092 M 0.023 N 0.046 P 0.051 Q 0.041 R 0.052 S 0.074 T 0.059 V 0.064
W 0.013 Y 0.033
SECTION I: HIGH-SCORING SEQUENCES
- Each of the following 41 sequences has E-value less than 10.
- The E-value of a sequence is the expected number of sequences
in a random database of the same size that would match the motifs as
well as the sequence does and is equal to the combined p-value of the
sequence times the number of sequences in the database.
- The combined p-value of a sequence measures the strength of the
match of the sequence to all the motifs and is calculated by
- finding the score of the single best match of each motif
to the sequence (best matches may overlap),
- calculating the sequence p-value of each score,
- forming the product of the p-values,
- taking the p-value of the product.
- The sequence p-value of a score is defined as the
probability of a random sequence of the same length containing
some match with as good or better a score.
- The score for the match of a position in a sequence to a motif
is computed by by summing the appropriate entry from each column of
the position-dependent scoring matrix that represents the motif.
- Sequences shorter than one or more of the motifs are skipped.
- The table is sorted by increasing E-value.
| Links | Sequence Name | Description | E-value | Length
|
|---|
|
| CLPQ_BACSU/3-180
|
| 7.6e-46
| 178
|
|
| HSLV_RALSO/3-177
|
| 1.5e-45
| 175
|
|
| HSLV_CHLTE/8-181
|
| 1.4e-42
| 174
|
|
| HSLV_THEMA/2-176
|
| 5.8e-37
| 175
|
|
| HSLV_THETN/1-176
|
| 7.4e-36
| 176
|
|
| HSLV_AQUAE/2-176
|
| 1e-35
| 175
|
|
| HSLV_LISMO/2-179
|
| 1.9e-35
| 178
|
|
| HSLV_RICPR/6-181
|
| 2e-35
| 176
|
|
| HSLV_STAAW/5-181
|
| 2.4e-35
| 177
|
|
| HSLV_CAMJE/1-176
|
| 4.2e-35
| 176
|
|
| HSLV_XYLFT/4-178
|
| 2e-10
| 175
|
|
| HSLV_BORBU/2-179
|
| 1.5e-09
| 178
|
|
| PSA7_SCHPO/27-211
|
| 0.19
| 185
|
|
| PSA1_ORYSJ/29-214
|
| 0.88
| 186
|
|
| Q8T915_DROME/46-228
|
| 1
| 183
|
|
| PSB9_MUSMB/17-198
|
| 1.1
| 182
|
|
| PSA1B_ARATH/29-214
|
| 1.5
| 186
|
|
| Q9BMX8_9TRYP/1-187
|
| 1.7
| 187
|
|
| PSB6_YEAST/16-197
|
| 2
| 182
|
|
| PSB1_MOUSE/33-212
|
| 2.1
| 180
|
|
| PSB_METJA/3-187
|
| 2.4
| 185
|
|
| PSB6_SCHPO/21-203
|
| 3.8
| 183
|
|
| PSA1_ENCCU/38-223
|
| 4.8
| 186
|
|
| PSA7_CAEEL/27-212
|
| 5.1
| 186
|
|
| PSA7_YEAST/27-215
|
| 5.2
| 189
|
|
| Q8UUL8_ORYLA/38-219
|
| 5.2
| 182
|
|
| O12993_ORYLA/11-192
|
| 5.3
| 182
|
|
| PSA1_SCHPO/29-215
|
| 5.3
| 187
|
|
| PSB5_CHICK/52-234
|
| 5.5
| 183
|
|
| PSB2A_ARATH/1-182
|
| 6
| 182
|
|
| PSA72_DROME/28-213
|
| 6.1
| 186
|
|
| Q8UVV5_HETFR/15-196
|
| 6.2
| 182
|
|
| PSA1_DROME/29-216
|
| 6.9
| 188
|
|
| PSB4_DROME/54-242
|
| 7.3
| 189
|
|
| PSA1_CHICK/28-214
|
| 7.6
| 187
|
|
| Q9RAW7_9ACTO/49-237
|
| 7.7
| 189
|
|
| PSB_ARCFU/8-191
|
| 8.7
| 184
|
|
| PSB2_ORYSJ/1-182
|
| 9
| 182
|
|
| PSB1_SULSO/2-183
|
| 9.3
| 182
|
|
| O62102_CAEEL/43-224
|
| 9.7
| 182
|
|
| PSA1_DICDI/29-216
|
| 9.8
| 188
|
SECTION II: MOTIF DIAGRAMS
- The ordering and spacing of all non-overlapping motif occurrences
are shown for each high-scoring sequence listed in Section I.
- A motif occurrence is defined as a position in the sequence whose
match to the motif has POSITION p-value less than 0.0001.
- The POSITION p-value of a match is the probability of
a single random subsequence of the length of the motif
scoring at least as well as the observed match.
- For each sequence, all motif occurrences are shown unless there
are overlaps. In that case, a motif occurrence is shown only if its
p-value is less than the product of the p-values of the other
(lower-numbered) motif occurrences that it overlaps.
- The table also shows the E-value of each sequence.
- Spacers and motif occurences are indicated by
- Spacers and motif occurences are indicated by
- Spacers and motif occurences are indicated by
- occurrence of motif `n' with p-value less than 0.0001.
- Sequences longer than 1000 are not shown to scale and are indicated by thicker lines.
| Links | Name | Expect | Motifs
|
|---|
|
| CLPQ_BACSU/3-180
| 7.6e-46
|
|
|
| HSLV_RALSO/3-177
| 1.5e-45
|
|
|
| HSLV_CHLTE/8-181
| 1.4e-42
|
|
|
| HSLV_THEMA/2-176
| 5.8e-37
|
|
|
| HSLV_THETN/1-176
| 7.4e-36
|
|
|
| HSLV_AQUAE/2-176
| 1e-35
|
|
|
| HSLV_LISMO/2-179
| 1.9e-35
|
|
|
| HSLV_RICPR/6-181
| 2e-35
|
|
|
| HSLV_STAAW/5-181
| 2.4e-35
|
|
|
| HSLV_CAMJE/1-176
| 4.2e-35
|
|
|
| HSLV_XYLFT/4-178
| 2e-10
|
|
|
| HSLV_BORBU/2-179
| 1.5e-09
|
|
|
| PSA7_SCHPO/27-211
| 0.19
|
|
|
| PSA1_ORYSJ/29-214
| 0.88
|
|
|
| Q8T915_DROME/46-228
| 1
|
|
|
| PSB9_MUSMB/17-198
| 1.1
|
|
|
| PSA1B_ARATH/29-214
| 1.5
|
|
|
| Q9BMX8_9TRYP/1-187
| 1.7
|
|
|
| PSB6_YEAST/16-197
| 2
|
|
|
| PSB1_MOUSE/33-212
| 2.1
|
|
|
| PSB_METJA/3-187
| 2.4
|
|
|
| PSB6_SCHPO/21-203
| 3.8
|
|
|
| PSA1_ENCCU/38-223
| 4.8
|
|
|
| PSA7_CAEEL/27-212
| 5.1
|
|
|
| PSA7_YEAST/27-215
| 5.2
|
|
|
| Q8UUL8_ORYLA/38-219
| 5.2
|
|
|
| O12993_ORYLA/11-192
| 5.3
|
|
|
| PSA1_SCHPO/29-215
| 5.3
|
|
|
| PSB5_CHICK/52-234
| 5.5
|
|
|
| PSB2A_ARATH/1-182
| 6
|
|
|
| PSA72_DROME/28-213
| 6.1
|
|
|
| Q8UVV5_HETFR/15-196
| 6.2
|
|
|
| PSA1_DROME/29-216
| 6.9
|
|
|
| PSB4_DROME/54-242
| 7.3
|
|
|
| PSA1_CHICK/28-214
| 7.6
|
|
|
| Q9RAW7_9ACTO/49-237
| 7.7
|
|
|
| PSB_ARCFU/8-191
| 8.7
|
|
|
| PSB2_ORYSJ/1-182
| 9
|
|
|
| PSB1_SULSO/2-183
| 9.3
|
|
|
| O62102_CAEEL/43-224
| 9.7
|
|
|
| PSA1_DICDI/29-216
| 9.8
|
|
| SCALE
|
| | |
| |
| |
| |
| |
| |
| |
| 1 |
25 |
50 |
75 |
100 |
125 |
150 |
|
|---|
SECTION III: ANNOTATED SEQUENCES
- The positions and p-values of the non-overlapping motif occurrences
are shown above the actual sequence for each of the high-scoring
sequences from Section I.
- A motif occurrence is defined as a position in the sequence whose
match to the motif has POSITION p-value less than 0.0001 as
defined in Section II.
- For each sequence, the first line specifies the name of the sequence.
- The second (and possibly more) lines give a description of the
sequence.
- Following the description line(s) is a line giving the length,
combined p-value, and E-value of the sequence as defined in Section I.
- The next line reproduces the motif diagram from Section II.
- The entire sequence is printed on the following lines.
- Motif occurrences are indicated directly above their positions in the
sequence on lines showing
- the motif number of the occurrence,
- the position p-value of the occurrence,
- the best possible match to the motif, and
- columns whose match to the motif has a positive score (indicated
by a plus sign).
CLPQ_BACSU/3-180
LENGTH = 178 COMBINED P-VALUE = 4.38e-48 E-VALUE = 7.6e-46
DIAGRAM: 49-[1]-79
[1]
3.4e-50
GFAGSTADAFTLFERFERKLEQHPGQ
+++++ ++++++++++++++++++++
1 SFHATTIFAVQHKGRSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFTLFEKFEAKLEEYNGN
LMRACVELAKDWRTDKYLRRLEAM
++++++++++++++++++++++++
76 LKRAAVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEPDDGILAIGSGGNYALAAGRALKKHAGESMS
HSLV_RALSO/3-177
LENGTH = 175 COMBINED P-VALUE = 8.44e-48 E-VALUE = 1.5e-45
DIAGRAM: 48-[1]-77
[1]
6.7e-50
GFAGSTADAFTLFERFERKLEQHPGQL
+++++++++++++++++++++++++++
1 QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRTIYDGKVLVGFAGATADAFSLLDRFEAKLQKYQGHL
MRACVELAKDWRTDKYLRRLEAM
+++++++++++++++ +++++++
76 LRAAVDLAKDWRTDRALRHLEAMLIVADRESTLVITGNGDVLDPEGGIAAIGSGGAYAQSAAKALMENTELAPRD
HSLV_CHLTE/8-181
LENGTH = 174 COMBINED P-VALUE = 8.00e-45 E-VALUE = 1.4e-42
DIAGRAM: 47-[1]-77
[1]
6.4e-47
GFAGSTADAFTLFERFERKLEQHPGQLM
+++++++++ +++++++++++ + + +
1 IRSTTVIGIIRDGKAALGSDGQMTLGNTVMKHSTRKIRSLYQGRFITGFAGATADALTLLDRFESKLEAYSGKLD
RACVELAKDWRTDKYLRRLEAM
++++++++++++++++++++++
76 RAAVELAKDWRTDKYLRRLEAMLAVVSTDKALIISGTGDVIEPEDGIVAIGSGSMYALAAARSLMKHTTLSAEEI
HSLV_THEMA/2-176
LENGTH = 175 COMBINED P-VALUE = 3.32e-39 E-VALUE = 5.8e-37
DIAGRAM: 48-[1]-77
[1]
2.6e-41
GFAGSTADAFTLFERFERKLEQHPGQL
+++++ +++ ++++++++++ + +++
1 KFHGTTILVVRRNGQTVMGGDGQVTFGSTVLKGNARKVRKLGEGKVLAGFAGSVADAMTLFDRFEAKLREWGGNL
MRACVELAKDWRTDKYLRRLEAM
+++++++++++++++++++++++
76 TKAAVELAKDWRTDRVLRRLEALLLVADKENIFIISGNGEVIQPDDDAAAIGSGGPYALAAAKALLRNTDLSARE
HSLV_THETN/1-176
LENGTH = 176 COMBINED P-VALUE = 4.25e-38 E-VALUE = 7.4e-36
DIAGRAM: 49-[1]-77
[1]
3.3e-40
GFAGSTADAFTLFERFERKLEQHPGQ
+++++ +++ ++ +++++++++ ++
1 MFRGTTIVAVRRGDRVSVAGDGQVTFGDSTILKHGAKKIRRLYNGEVIVGFAGSVADAMTLSQKFEEKLEQYGGN
LMRACVELAKDWRTDKYLRRLEAM
+++++++++ ++++++ +++++++
76 LKRAAVELAQEWRKDKILRKLEALLIAADKKDTLLISGTGEVIEPDEDVIGIGSGGNYAMAAALALRYNTDLDTE
HSLV_AQUAE/2-176
LENGTH = 175 COMBINED P-VALUE = 5.76e-38 E-VALUE = 1e-35
DIAGRAM: 48-[1]-77
[1]
4.6e-40
GFAGSTADAFTLFERFERKLEQHPGQL
+++++ ++ ++++++++++++ +++
1 EVKATTILAVRRDGKTAVGGDGQVTLGSSVIKHTARKIRKLYKGQVIVGFAGSAADGLALMERLEAKLEEYRGNL
MRACVELAKDWRTDKYLRRLEAM
+++++ +++++++++++++++++
76 LKASVQLAKDWRMDKYLRRLEALLLAVDREHMLLISGNGDIIEPDEPVLAIGSGGDYARAAALALYRNTDLSARE
HSLV_LISMO/2-179
LENGTH = 178 COMBINED P-VALUE = 1.10e-37 E-VALUE = 1.9e-35
DIAGRAM: 49-[1]-79
[1]
8.5e-40
GFAGSTADAFTLFERFERKLEQHPGQ
+++++ ++++++++++++++ +++++
1 ELHATTIFAVQHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLFHDKVIAGFAGSVADAFTLFEKFEAKLNEYNGN
LMRACVELAKDWRTDKYLRRLEAM
+ +++++++ +++++ ++++++++
76 LERASVELAQQWRSDSVLRKLEAMLIVMDKDTLLLVSGTGEVIEPDDGILAIGSGGNYALAAGRALKRHNGGQME
HSLV_RICPR/6-181
LENGTH = 176 COMBINED P-VALUE = 1.15e-37 E-VALUE = 2e-35
DIAGRAM: 48-[1]-78
[1]
9.0e-40
GFAGSTADAFTLFERFERKLEQHPGQL
++++++++ ++++++ + ++++ ++
1 ALHGTTILCLKKKEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIVGFAGSTADGLALFEKLEIKIEQYNSNL
MRACVELAKDWRTDKYLRRLEAM
++++++++++++ ++++++++++
76 LRSAVELAKDWRNDKYLRRLEAMMIVADRSHILILTGNGDVIEPENNVAAIGSGGLFALSAARALMSYENNLTAE
HSLV_STAAW/5-181
LENGTH = 177 COMBINED P-VALUE = 1.39e-37 E-VALUE = 2.4e-35
DIAGRAM: 49-[1]-78
[1]
1.1e-39
GFAGSTADAFTLFERFERKLEQHPGQ
+++++ +++++++++++ +++++ ++
1 TLHATTIYAVRHNGKAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTLFEKFETKLQQFSGN
LMRACVELAKDWRTDKYLRRLEAM
+ +++++++ +++ ++ +++++++
76 LERAAVELAQEWRGDKQLRQLEAMLIVMDKDAILVVSGTGEVIAPDDDLIAIGSGGNYALSAGRALKRHASHLSA
HSLV_CAMJE/1-176
LENGTH = 176 COMBINED P-VALUE = 2.40e-37 E-VALUE = 4.2e-35
DIAGRAM: 48-[1]-78
[1]
1.9e-39
GFAGSTADAFTLFERFERKLEQHPGQL
++++++++++ +++++++ +++ ++++
1 MFHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKLNNGKVLAGFAGSTADAFNLFDMFENLLQSSKGDL
MRACVELAKDWRTDKYLRRLEAM
++++ ++++++++++++++++++
76 LKAAIDFSKEWRKDKYLRKLEAMMLVLDRNHIFLLSGTGDVVEPEDGQIAAIGSGGNYALSAARALAKHTDLDEE
HSLV_XYLFT/4-178
LENGTH = 175 COMBINED P-VALUE = 1.15e-12 E-VALUE = 2e-10
DIAGRAM: 48-[1]-77
[1]
9.1e-15
GFAGSTADAFTLFERFERKLEQHPGQL
+ + + + + ++ +++
1 VFHATTIVCVRRGDKVAIAGDGQVTLGHTVMKSNARKVRRLGRDGQVLAGFAGAAADAFTLFELFEAKLEKHGQL
MRACVELAKDWRTDKYLRRLEAM
++++++++++++ + + +++++
76 SRAAVELAKDWRTERRLGKLEALLVVADKETSLVISGTGDVIEPEDGIVAIGSGGSYALSAARALMAHTALDART
HSLV_BORBU/2-179
LENGTH = 178 COMBINED P-VALUE = 8.78e-12 E-VALUE = 1.5e-09
DIAGRAM: 51-[1]-77
[1]
6.8e-14
GFAGSTADAFTLFERFERKLEQHP
+ + ++ +
1 SFKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAITLFEKFEEKIKAKGDGL
GQLMRACVELAKDWRTDKYLRRLEAM
+ +++++++++++++++ + +++++
76 IDIKRAAVDLAKDWRSDKILHKLEAMMLVADSNNILLISGTGDVVEPEEDVISIGSGGNYAYSAALAYMENKKLS
PSA7_SCHPO/27-211
LENGTH = 185 COMBINED P-VALUE = 1.10e-03 E-VALUE = 0.19
DIAGRAM: 46-[1]-89
[1]
8.1e-06
GFAGSTADAFTLFERFERKLEQHPGQLMR
+++ +++ + ++ + ++ ++
1 VRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQKIAMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLAD
ACVELAKDWRTDKYLRRLEAM
+ + ++
76 PVSIEYLTRYVAGVQQKYTQSGGVRPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEK
PSA1_ORYSJ/29-214
LENGTH = 186 COMBINED P-VALUE = 5.07e-03 E-VALUE = 0.88
DIAGRAM: 15-[1]-67-[1]-4
[1]
5.4e-05
GFAGSTADAFTLFERFERKLEQHPGQLMRACVELAKDWRTDKYLRRLEAM
+ + + + ++ + + + + + + +
1 VKQGSACVGLRSRTHAVLAAANKAASELSSHQRKVFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPL
[1]
3.7e-05
GFAGSTADAFTLFERFER
+ + + +++
76 PVSRLALRLADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEG
KLEQHPGQLMRACVELAKDWRTDKYLRRLEAM
+ ++ ++ + + ++ +
151 YNDYTPEQLIKDALSAIKETLQGEKLTSSNCTVAIV
Q8T915_DROME/46-228
LENGTH = 183 COMBINED P-VALUE = 5.96e-03 E-VALUE = 1
DIAGRAM: 47-[1]-86
[1]
4.5e-05
GFAGSTADAFTLFERFERKLEQHPGQLM
++ + + ++ ++++ + +
1 FTTGTTVVGIVFDGGVIIGAESRATSGGIVFSKTCRKIIELQANIFAAGAGTARDTKALVELTRAQLELHRMNTG
RACVELAKDWRTDKYLRRLEAM
+ + + +
76 FRKVPVCCANQMIRQLLFRFNGNIDADMIIGGADNTGAHLFCTRSDGSTDTAPFTSIGSGYQVSMSILESRWSED
PSB9_MUSMB/17-198
LENGTH = 182 COMBINED P-VALUE = 6.38e-03 E-VALUE = 1.1
DIAGRAM: 47-[1]-85
[1]
4.8e-05
GFAGSTADAFTLFERFERKLEQHPGQLM
++ +++ ++ +++ + +
1 VHTGTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELE
RACVELAKDWRTDKYLRRLEAM
++ +
76 EPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGTMGGMLIRQPFTISGSGSSYIYGYVDAAYKPGM
PSA1B_ARATH/29-214
LENGTH = 186 COMBINED P-VALUE = 8.35e-03 E-VALUE = 1.5
DIAGRAM: 132-[1]-4
[1]
6.1e-05
GFAGSTADAFTLFERFER
+ + + ++++
76 PVGRLVVHLADKAQVCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFES
KLEQHPGQLMRACVELAKDWRTDKYLRRLEAM
++ + ++ + + + +
151 FQESSKEDLIKDAIMAIRETLQGETLKSSLCTVSVL
Q9BMX8_9TRYP/1-187
LENGTH = 187 COMBINED P-VALUE = 9.91e-03 E-VALUE = 1.7
DIAGRAM: 129-[1]-8
[1]
7.2e-05
GFAGSTADAFTLFERFERKLE
+ ++ + ++
76 DVLRPDEIFCYLHRHIYHKRSNFEPCLCSFVVCGCQGGVPFLGGIDSVGTQWRDDCVATGYGAYIAIPLLRKALE
QHPGQLMRACVELAKDWRTDKYLRRLEAM
+ + +++ ++ + + +
151 KPGGLSREEAVEVIKNCLRVLFYRECRAINKFQIADA
PSB6_YEAST/16-197
LENGTH = 182 COMBINED P-VALUE = 1.12e-02 E-VALUE = 2
DIAGRAM: 47-[1]-85
[1]
8.5e-05
GFAGSTADAFTLFERFERKLEQHPGQLM
++ ++ + ++ + +
1 VSLGTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYG
RACVELAKDWRTDKYLRRLEAM
+ + + + + +
76 TPSTETAASVFKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENM
PSB1_MOUSE/33-212
LENGTH = 180 COMBINED P-VALUE = 1.23e-02 E-VALUE = 2.1
DIAGRAM: 47-[1]-83
[1]
9.4e-05
GFAGSTADAFTLFERFERKLEQHPGQLM
+ + ++ ++ ++ + +++
1 AFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNN
RACVELAKDWRTDKYLRRLEAM
++ + +
76 KAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGF
PSB_METJA/3-187
LENGTH = 185 COMBINED P-VALUE = 1.37e-02 E-VALUE = 2.4
DIAGRAM: 185
PSB6_SCHPO/21-203
LENGTH = 183 COMBINED P-VALUE = 2.19e-02 E-VALUE = 3.8
DIAGRAM: 183
PSA1_ENCCU/38-223
LENGTH = 186 COMBINED P-VALUE = 2.75e-02 E-VALUE = 4.8
DIAGRAM: 186
PSA7_CAEEL/27-212
LENGTH = 186 COMBINED P-VALUE = 2.94e-02 E-VALUE = 5.1
DIAGRAM: 186
PSA7_YEAST/27-215
LENGTH = 189 COMBINED P-VALUE = 3.01e-02 E-VALUE = 5.2
DIAGRAM: 189
Q8UUL8_ORYLA/38-219
LENGTH = 182 COMBINED P-VALUE = 3.01e-02 E-VALUE = 5.2
DIAGRAM: 182
O12993_ORYLA/11-192
LENGTH = 182 COMBINED P-VALUE = 3.06e-02 E-VALUE = 5.3
DIAGRAM: 182
PSA1_SCHPO/29-215
LENGTH = 187 COMBINED P-VALUE = 3.07e-02 E-VALUE = 5.3
DIAGRAM: 187
PSB5_CHICK/52-234
LENGTH = 183 COMBINED P-VALUE = 3.13e-02 E-VALUE = 5.5
DIAGRAM: 183
PSB2A_ARATH/1-182
LENGTH = 182 COMBINED P-VALUE = 3.44e-02 E-VALUE = 6
DIAGRAM: 182
PSA72_DROME/28-213
LENGTH = 186 COMBINED P-VALUE = 3.49e-02 E-VALUE = 6.1
DIAGRAM: 186
Q8UVV5_HETFR/15-196
LENGTH = 182 COMBINED P-VALUE = 3.56e-02 E-VALUE = 6.2
DIAGRAM: 182
PSA1_DROME/29-216
LENGTH = 188 COMBINED P-VALUE = 3.97e-02 E-VALUE = 6.9
DIAGRAM: 188
PSB4_DROME/54-242
LENGTH = 189 COMBINED P-VALUE = 4.20e-02 E-VALUE = 7.3
DIAGRAM: 189
PSA1_CHICK/28-214
LENGTH = 187 COMBINED P-VALUE = 4.35e-02 E-VALUE = 7.6
DIAGRAM: 187
Q9RAW7_9ACTO/49-237
LENGTH = 189 COMBINED P-VALUE = 4.41e-02 E-VALUE = 7.7
DIAGRAM: 189
PSB_ARCFU/8-191
LENGTH = 184 COMBINED P-VALUE = 5.00e-02 E-VALUE = 8.7
DIAGRAM: 184
PSB2_ORYSJ/1-182
LENGTH = 182 COMBINED P-VALUE = 5.17e-02 E-VALUE = 9
DIAGRAM: 182
PSB1_SULSO/2-183
LENGTH = 182 COMBINED P-VALUE = 5.33e-02 E-VALUE = 9.3
DIAGRAM: 182
O62102_CAEEL/43-224
LENGTH = 182 COMBINED P-VALUE = 5.59e-02 E-VALUE = 9.7
DIAGRAM: 182
PSA1_DICDI/29-216
LENGTH = 188 COMBINED P-VALUE = 5.66e-02 E-VALUE = 9.8
DIAGRAM: 188
Debugging Information
CPU: kodomo.fbb.msu.ru
Time 0.012000 secs.
mast ./meme/meme.txt -d ./PF00227_seed.fasta -ev 10.000000 -mt 0.000100
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Links to Entrez database at NCBI
Links to sequence scores (section I)
Links to motif diagrams (section II)
Links to sequence/motif annotated alignments (section III)
This information