########################################
# Program: needle
# Rundate: Wed 23 Apr 2014 02:13:05
# Commandline: needle
#    [-asequence] 1diffr.fasta
#    [-bsequence] 2diffr.fasta
#    [-outfile] diffropt.txt
# Align_format: srspair
# Report_file: diffropt.txt
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: O28271_ARCFU_1-106
# 2: Q9YEQ6_AERPE_1-178
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 205
# Identity:      33/205 (16.1%)
# Similarity:    47/205 (22.9%)
# Gaps:         126/205 (61.5%)
# Score: 16.0
# 
#
#=======================================

O28271_ARCFU_      1 -------------------------MSNPLGE-----LVKA------LEK     14
                                              ...|..|     ||||      .|.
Q9YEQ6_AERPE_      1 MARLEARALSKKERRSLLERLKPYYTRIPFSEKADLRLVKARTDSGEYEI     50

O28271_ARCFU_     15 LS-------FKPSDVRIYSLL--LERGGMRVSEIARELDLSARFVRDRLK     55
                     ::       |:.||.|||..|  |:..|:                 |.||
Q9YEQ6_AERPE_     51 ITVDGVPCLFEWSDGRIYPTLQCLKAFGV-----------------DWLK     83

O28271_ARCFU_     56 --VLLKRG----------------------FVRREIVEKGWVGYIYSAEK     81
                       ||:.:|                      |.|.::|    ....:....
Q9YEQ6_AERPE_     84 GVVLVDKGAAIALAKGAHLMIPGVVGVEGSFTRGDVV----AALYHETRT    129

O28271_ARCFU_     82 PEKV-LKEFKSSILGEIERIEKMFTD------------------------    106
                     |..| :.|..||.|      ||::.:                        
Q9YEQ6_AERPE_    130 PVMVGVAEVDSSAL------EKLYREKARGRAVRRVHRLGDALWELAQEV    173

O28271_ARCFU_    106 -----    106
                          
Q9YEQ6_AERPE_    174 GKRLS    178


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