# BLASTN 2.2.28+
# Query: 20611-20823 NC_000964 [locus_tag=BSU_misc_RNA_1]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 4 hits found
20611-20823	gi|218230750|ref|NC_011725.1|	73.00	100	23	3	9	106	20079	20176	9e-07	50.0
20611-20823	gi|218230750|ref|NC_011725.1|	83.33	42	5	1	174	213	20251	20292	1e-04	42.8
20611-20823	gi|218230750|ref|NC_011725.1|	92.86	28	2	0	43	70	1251777	1251804	1e-04	42.8
20611-20823	gi|218230750|ref|NC_011725.1|	84.21	38	6	0	33	70	4336469	4336506	1e-04	42.8
# BLASTN 2.2.28+
# Query: 26533-26635 NC_000964 [gene=scr] [locus_tag=BSU_misc_RNA_2]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 1 hits found
26533-26635	gi|218230750|ref|NC_011725.1|	83.50	103	17	0	1	103	25234	25336	5e-25	 109
# BLASTN 2.2.28+
# Query: 119855-119995 NC_000964 [locus_tag=BSU_misc_RNA_3]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 1 hits found
119855-119995	gi|218230750|ref|NC_011725.1|	81.25	48	8	1	17	64	111972	112018	9e-05	42.8
# BLASTN 2.2.28+
# Query: 153737-153793 NC_000964 [locus_tag=BSU_misc_RNA_4]
# Database: NC_011725.fna
# 0 hits found
# BLASTN 2.2.28+
# Query: 200017-200187 NC_000964 [locus_tag=BSU_misc_RNA_5]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 1 hits found
200017-200187	gi|218230750|ref|NC_011725.1|	86.27	51	6	1	43	93	163334	163383	5e-09	57.2
# BLASTN 2.2.28+
# Query: 276815-277062 NC_000964 [locus_tag=BSU_misc_RNA_6]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 2 hits found
276815-277062	gi|218230750|ref|NC_011725.1|	92.11	38	2	1	210	246	4436668	4436631	3e-07	51.8
276815-277062	gi|218230750|ref|NC_011725.1|	86.11	36	3	1	213	246	3231550	3231515	6e-04	41.0
# BLASTN 2.2.28+
# Query: 486092-486235 NC_000964 [locus_tag=BSU_misc_RNA_7]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 3 hits found
486092-486235	gi|218230750|ref|NC_011725.1|	85.53	76	6	2	58	131	1785285	1785357	3e-17	84.2
486092-486235	gi|218230750|ref|NC_011725.1|	85.71	70	8	2	61	130	3235249	3235316	1e-14	75.2
486092-486235	gi|218230750|ref|NC_011725.1|	74.00	150	13	10	7	142	770459	770596	5e-14	73.4
# BLASTN 2.2.28+
# Query: 626346-626446 NC_000964 [locus_tag=BSU_misc_RNA_8]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 1 hits found
626346-626446	gi|218230750|ref|NC_011725.1|	83.05	59	8	2	24	80	259214	259272	9e-09	55.4
# BLASTN 2.2.28+
# Query: 694425-694527 NC_000964 [locus_tag=BSU_misc_RNA_9]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 3 hits found
694425-694527	gi|218230750|ref|NC_011725.1|	89.06	64	7	0	21	84	261168	261231	2e-17	84.2
694425-694527	gi|218230750|ref|NC_011725.1|	82.26	62	11	0	21	82	1545344	1545405	6e-11	62.6
694425-694527	gi|218230750|ref|NC_011725.1|	80.65	62	12	0	21	82	308791	308852	8e-10	59.0
# BLASTN 2.2.28+
# Query: 698369-698471 NC_000964 [locus_tag=BSU_misc_RNA_10]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 5 hits found
698369-698471	gi|218230750|ref|NC_011725.1|	81.40	86	14	1	11	94	3810126	3810041	2e-16	80.6
698369-698471	gi|218230750|ref|NC_011725.1|	83.58	67	11	0	18	84	356150	356084	1e-13	71.6
698369-698471	gi|218230750|ref|NC_011725.1|	80.65	62	12	0	21	82	261168	261229	8e-10	59.0
698369-698471	gi|218230750|ref|NC_011725.1|	75.32	77	19	0	17	93	308787	308863	3e-08	53.6
698369-698471	gi|218230750|ref|NC_011725.1|	79.25	53	11	0	20	72	1545343	1545395	5e-06	46.4
# BLASTN 2.2.28+
# Query: 955655-955762 NC_000964 [locus_tag=BSU_misc_RNA_11]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 2 hits found
955655-955762	gi|218230750|ref|NC_011725.1|	88.57	70	5	1	28	94	5146551	5146482	5e-19	89.7
955655-955762	gi|218230750|ref|NC_011725.1|	82.93	41	7	0	54	94	2506182	2506222	6e-05	42.8
# BLASTN 2.2.28+
# Query: 1180685-1180802 NC_000964 [locus_tag=BSU_misc_RNA_12]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 11 hits found
1180685-1180802	gi|218230750|ref|NC_011725.1|	71.79	117	18	4	3	116	1413831	1413935	9e-10	59.0
1180685-1180802	gi|218230750|ref|NC_011725.1|	70.00	120	21	3	1	118	333898	334004	1e-08	55.4
1180685-1180802	gi|218230750|ref|NC_011725.1|	74.19	93	16	3	2	93	174421	174336	4e-08	53.6
1180685-1180802	gi|218230750|ref|NC_011725.1|	86.96	46	5	1	4	49	385068	385024	4e-08	53.6
1180685-1180802	gi|218230750|ref|NC_011725.1|	83.67	49	8	0	1	49	4241834	4241882	4e-08	53.6
1180685-1180802	gi|218230750|ref|NC_011725.1|	69.23	117	18	3	3	116	182707	182808	1e-07	51.8
1180685-1180802	gi|218230750|ref|NC_011725.1|	84.78	46	7	0	1	46	1426592	1426637	1e-07	51.8
1180685-1180802	gi|218230750|ref|NC_011725.1|	84.00	50	7	1	1	50	3193781	3193733	1e-07	51.8
1180685-1180802	gi|218230750|ref|NC_011725.1|	79.17	48	10	0	5	52	194260	194213	7e-05	42.8
1180685-1180802	gi|218230750|ref|NC_011725.1|	87.10	31	4	0	1	31	3080586	3080556	8e-04	39.2
1180685-1180802	gi|218230750|ref|NC_011725.1|	80.00	50	8	2	2	50	4938796	4938748	8e-04	39.2
# BLASTN 2.2.28+
# Query: 1219164-1219378 NC_000964 [locus_tag=BSU_misc_RNA_13]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 1 hits found
1219164-1219378	gi|218230750|ref|NC_011725.1|	72.93	133	33	3	82	212	1199328	1199197	3e-12	68.0
# BLASTN 2.2.28+
# Query: 1242262-1242370 NC_000964 [locus_tag=BSU_misc_RNA_14]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 1 hits found
1242262-1242370	gi|218230750|ref|NC_011725.1|	77.32	97	19	2	1	97	2506131	2506224	5e-13	69.8
# BLASTN 2.2.28+
# Query: 1258304-1258424 NC_000964 [locus_tag=BSU_misc_RNA_15]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 14 hits found
1258304-1258424	gi|218230750|ref|NC_011725.1|	72.73	121	19	2	1	121	333898	334004	4e-14	73.4
1258304-1258424	gi|218230750|ref|NC_011725.1|	84.75	59	9	0	5	63	194260	194202	6e-12	66.2
1258304-1258424	gi|218230750|ref|NC_011725.1|	89.36	47	5	0	3	49	2574903	2574949	8e-11	62.6
1258304-1258424	gi|218230750|ref|NC_011725.1|	88.00	50	5	1	1	50	3193781	3193733	3e-10	60.8
1258304-1258424	gi|218230750|ref|NC_011725.1|	85.71	49	7	0	3	51	182707	182755	3e-09	57.2
1258304-1258424	gi|218230750|ref|NC_011725.1|	86.96	46	6	0	1	46	3080586	3080541	3e-09	57.2
1258304-1258424	gi|218230750|ref|NC_011725.1|	85.71	49	7	0	1	49	4241834	4241882	3e-09	57.2
1258304-1258424	gi|218230750|ref|NC_011725.1|	69.42	121	22	3	1	121	1426592	1426697	1e-07	51.8
1258304-1258424	gi|218230750|ref|NC_011725.1|	71.07	121	25	5	2	120	174421	174309	2e-06	48.2
1258304-1258424	gi|218230750|ref|NC_011725.1|	84.78	46	6	1	4	49	385068	385024	2e-06	48.2
1258304-1258424	gi|218230750|ref|NC_011725.1|	84.00	50	6	2	2	50	4938796	4938748	2e-06	48.2
1258304-1258424	gi|218230750|ref|NC_011725.1|	72.04	93	12	4	3	94	1413831	1413910	6e-06	46.4
1258304-1258424	gi|218230750|ref|NC_011725.1|	80.39	51	8	2	1	50	4052363	4052412	3e-04	41.0
1258304-1258424	gi|218230750|ref|NC_011725.1|	79.17	48	9	1	2	48	5328532	5328485	9e-04	39.2
# BLASTN 2.2.28+
# Query: 1376328-1376439 NC_000964 [locus_tag=BSU_misc_RNA_16]
# Database: NC_011725.fna
# 0 hits found
# BLASTN 2.2.28+
# Query: 1378233-1378443 NC_000964 [locus_tag=BSU_misc_RNA_17]
# Database: NC_011725.fna
# 0 hits found
# BLASTN 2.2.28+
# Query: 1385736-1385891 NC_000964 [locus_tag=BSU_misc_RNA_18]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 2 hits found
1385736-1385891	gi|218230750|ref|NC_011725.1|	83.75	80	10	2	1	79	4050170	4050093	4e-16	80.6
1385736-1385891	gi|218230750|ref|NC_011725.1|	96.00	25	1	0	112	136	4050079	4050055	3e-04	41.0
# BLASTN 2.2.28+
# Query: 1391739-1391851 NC_000964 [locus_tag=BSU_misc_RNA_19]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 1 hits found
1391739-1391851	gi|218230750|ref|NC_011725.1|	89.66	29	3	0	68	96	432157	432185	8e-04	39.2
# BLASTN 2.2.28+
# Query: 1424527-1424683 NC_000964 [locus_tag=BSU_misc_RNA_20]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 1 hits found
1424527-1424683	gi|218230750|ref|NC_011725.1|	80.43	92	14	2	1	92	4050170	4050083	4e-16	80.6
# BLASTN 2.2.28+
# Query: 1426876-1426976 NC_000964 [locus_tag=BSU_misc_RNA_21]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 8 hits found
1426876-1426976	gi|218230750|ref|NC_011725.1|	81.73	104	14	2	1	99	4052363	4052466	9e-22	98.7
1426876-1426976	gi|218230750|ref|NC_011725.1|	80.23	86	8	4	2	79	174421	174337	4e-13	69.8
1426876-1426976	gi|218230750|ref|NC_011725.1|	81.33	75	10	3	3	74	1413831	1413904	6e-11	62.6
1426876-1426976	gi|218230750|ref|NC_011725.1|	75.49	102	22	3	2	100	5328532	5328431	2e-10	60.8
1426876-1426976	gi|218230750|ref|NC_011725.1|	86.54	52	6	1	2	52	4050169	4050118	7e-10	59.0
1426876-1426976	gi|218230750|ref|NC_011725.1|	78.31	83	12	4	2	79	4938796	4938715	3e-09	57.2
1426876-1426976	gi|218230750|ref|NC_011725.1|	85.42	48	7	0	2	49	4720094	4720047	9e-09	55.4
1426876-1426976	gi|218230750|ref|NC_011725.1|	86.96	46	5	1	4	49	385068	385024	3e-08	53.6
# BLASTN 2.2.28+
# Query: 1439274-1439318 NC_000964 [locus_tag=BSU_misc_RNA_22]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 1 hits found
1439274-1439318	gi|218230750|ref|NC_011725.1|	85.71	42	5	1	1	42	1350668	1350708	1e-06	46.4
# BLASTN 2.2.28+
# Query: 1569199-1569319 NC_000964 [locus_tag=BSU_misc_RNA_23]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 1 hits found
1569199-1569319	gi|218230750|ref|NC_011725.1|	100.00	65	0	0	57	121	3955544	3955480	1e-27	 118
# BLASTN 2.2.28+
# Query: 1607367-1607468 NC_000964 [locus_tag=BSU_misc_RNA_24]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 3 hits found
1607367-1607468	gi|218230750|ref|NC_011725.1|	86.67	45	6	0	43	87	5146527	5146483	9e-09	55.4
1607367-1607468	gi|218230750|ref|NC_011725.1|	93.10	29	2	0	57	85	432157	432185	2e-05	44.6
1607367-1607468	gi|218230750|ref|NC_011725.1|	87.18	39	4	1	57	95	2506191	2506228	2e-05	44.6
# BLASTN 2.2.28+
# Query: 1613078-1613304 NC_000964 [locus_tag=BSU_misc_RNA_25]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 1 hits found
1613078-1613304	gi|218230750|ref|NC_011725.1|	85.37	41	4	1	185	225	3920377	3920339	4e-05	44.6
# BLASTN 2.2.28+
# Query: 1618161-1618277 NC_000964 [locus_tag=BSU_misc_RNA_26]
# Database: NC_011725.fna
# 0 hits found
# BLASTN 2.2.28+
# Query: 1618853-1618970 NC_000964 [locus_tag=BSU_misc_RNA_27]
# Database: NC_011725.fna
# 0 hits found
# BLASTN 2.2.28+
# Query: 1620331-1620445 NC_000964 [locus_tag=BSU_misc_RNA_28]
# Database: NC_011725.fna
# 0 hits found
# BLASTN 2.2.28+
# Query: 1630115-1630220 NC_000964 [locus_tag=BSU_misc_RNA_29]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 5 hits found
1630115-1630220	gi|218230750|ref|NC_011725.1|	82.08	106	16	2	3	105	1413831	1413936	3e-22	 100
1630115-1630220	gi|218230750|ref|NC_011725.1|	77.48	111	16	4	3	104	174420	174310	8e-16	78.8
1630115-1630220	gi|218230750|ref|NC_011725.1|	74.77	107	19	4	3	104	4938795	4938692	2e-10	60.8
1630115-1630220	gi|218230750|ref|NC_011725.1|	74.73	91	16	2	3	86	4241628	4241538	8e-10	59.0
1630115-1630220	gi|218230750|ref|NC_011725.1|	70.43	115	20	6	2	104	2574902	2575014	2e-04	41.0
# BLASTN 2.2.28+
# Query: 1675981-1676022 NC_000964 [locus_tag=BSU_misc_RNA_30]
# Database: NC_011725.fna
# 0 hits found
# BLASTN 2.2.28+
# Query: 2025160-2025251 NC_000964 [locus_tag=BSU_misc_RNA_31]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 13 hits found
2025160-2025251	gi|218230750|ref|NC_011725.1|	78.22	101	9	2	2	89	194263	194163	5e-18	86.0
2025160-2025251	gi|218230750|ref|NC_011725.1|	77.00	100	9	2	5	92	3080582	3080485	2e-16	80.6
2025160-2025251	gi|218230750|ref|NC_011725.1|	82.43	74	7	3	1	69	3193782	3193710	1e-12	68.0
2025160-2025251	gi|218230750|ref|NC_011725.1|	93.18	44	3	0	5	48	182709	182752	4e-12	66.2
2025160-2025251	gi|218230750|ref|NC_011725.1|	93.18	44	3	0	5	48	333902	333945	4e-12	66.2
2025160-2025251	gi|218230750|ref|NC_011725.1|	90.91	44	4	0	5	48	2574905	2574948	5e-11	62.6
2025160-2025251	gi|218230750|ref|NC_011725.1|	70.65	92	13	1	10	87	1426601	1426692	3e-08	53.6
2025160-2025251	gi|218230750|ref|NC_011725.1|	85.71	49	6	1	5	52	4241838	4241886	3e-08	53.6
2025160-2025251	gi|218230750|ref|NC_011725.1|	86.96	46	5	1	5	49	5328529	5328484	3e-08	53.6
2025160-2025251	gi|218230750|ref|NC_011725.1|	88.89	45	3	2	5	48	4938793	4938750	1e-07	51.8
2025160-2025251	gi|218230750|ref|NC_011725.1|	84.09	44	6	1	5	48	174418	174376	1e-05	44.6
2025160-2025251	gi|218230750|ref|NC_011725.1|	84.09	44	6	1	5	48	385067	385025	1e-05	44.6
2025160-2025251	gi|218230750|ref|NC_011725.1|	84.44	45	5	2	5	48	4052367	4052410	5e-05	42.8
# BLASTN 2.2.28+
# Query: 2095927-2096113 NC_000964 [locus_tag=BSU_misc_RNA_32]
# Database: NC_011725.fna
# 0 hits found
# BLASTN 2.2.28+
# Query: 2320113-2320213 NC_000964 [locus_tag=BSU_misc_RNA_34]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 3 hits found
2320113-2320213	gi|218230750|ref|NC_011725.1|	85.14	74	9	2	17	88	1545340	1545413	3e-15	77.0
2320113-2320213	gi|218230750|ref|NC_011725.1|	82.14	56	8	1	3	58	308775	308828	3e-08	53.6
2320113-2320213	gi|218230750|ref|NC_011725.1|	83.02	53	8	1	21	72	261168	261220	1e-07	51.8
# BLASTN 2.2.28+
# Query: 2331330-2331715 NC_000964 [gene=rnpB] [locus_tag=BSU_misc_RNA_35]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 1 hits found
2331330-2331715	gi|218230750|ref|NC_011725.1|	80.15	403	56	11	1	386	1538129	1538524	2e-93	 338
# BLASTN 2.2.28+
# Query: 2431473-2431617 NC_000964 [locus_tag=BSU_misc_RNA_36]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 2 hits found
2431473-2431617	gi|218230750|ref|NC_011725.1|	72.34	141	34	4	4	142	4115048	4115185	8e-12	66.2
2431473-2431617	gi|218230750|ref|NC_011725.1|	71.22	139	23	5	7	139	1471455	1471582	3e-11	64.4
# BLASTN 2.2.28+
# Query: 2549407-2549504 NC_000964 [locus_tag=BSU_misc_RNA_37]
# Database: NC_011725.fna
# 0 hits found
# BLASTN 2.2.28+
# Query: 2549505-2549606 NC_000964 [locus_tag=BSU_misc_RNA_38]
# Database: NC_011725.fna
# 0 hits found
# BLASTN 2.2.28+
# Query: 2608732-2608906 NC_000964 [locus_tag=BSU_misc_RNA_39]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 4 hits found
2608732-2608906	gi|218230750|ref|NC_011725.1|	75.00	96	21	3	80	173	4857989	4858083	2e-08	55.4
2608732-2608906	gi|218230750|ref|NC_011725.1|	86.11	36	5	0	137	172	20254	20289	1e-04	42.8
2608732-2608906	gi|218230750|ref|NC_011725.1|	88.57	35	3	1	139	172	3920374	3920340	1e-04	42.8
2608732-2608906	gi|218230750|ref|NC_011725.1|	86.49	37	4	1	138	173	2588932	2588968	4e-04	41.0
# BLASTN 2.2.28+
# Query: 2800890-2801097 NC_000964 [locus_tag=BSU_misc_RNA_40]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 2 hits found
2800890-2801097	gi|218230750|ref|NC_011725.1|	81.93	83	12	3	43	122	4366748	4366666	3e-13	71.6
2800890-2801097	gi|218230750|ref|NC_011725.1|	86.11	36	5	0	170	205	4366608	4366573	1e-04	42.8
# BLASTN 2.2.28+
# Query: 2814490-2814682 NC_000964 [locus_tag=BSU_misc_RNA_41]
# Database: NC_011725.fna
# 0 hits found
# BLASTN 2.2.28+
# Query: 2817899-2818131 NC_000964 [locus_tag=BSU_misc_RNA_42]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 4 hits found
2817899-2818131	gi|218230750|ref|NC_011725.1|	88.00	50	4	1	186	233	4382552	4382503	6e-10	60.8
2817899-2818131	gi|218230750|ref|NC_011725.1|	87.50	40	4	1	191	230	20251	20289	1e-05	46.4
2817899-2818131	gi|218230750|ref|NC_011725.1|	86.49	37	5	0	195	231	2588932	2588968	4e-05	44.6
2817899-2818131	gi|218230750|ref|NC_011725.1|	86.84	38	4	1	194	231	4858047	4858083	2e-04	42.8
# BLASTN 2.2.28+
# Query: 2855840-2855915 NC_000964 [locus_tag=BSU_misc_RNA_43]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 1 hits found
2855840-2855915	gi|218230750|ref|NC_011725.1|	73.53	68	16	1	5	70	4422480	4422413	5e-04	39.2
# BLASTN 2.2.28+
# Query: 2869366-2869588 NC_000964 [locus_tag=BSU_misc_RNA_44]
# Database: NC_011725.fna
# 0 hits found
# BLASTN 2.2.28+
# Query: 2897094-2897340 NC_000964 [locus_tag=BSU_misc_RNA_45]
# Database: NC_011725.fna
# 0 hits found
# BLASTN 2.2.28+
# Query: 2910872-2911051 NC_000964 [locus_tag=BSU_misc_RNA_46]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 1 hits found
2910872-2911051	gi|218230750|ref|NC_011725.1|	69.08	152	42	5	25	173	1412060	1412209	3e-05	44.6
# BLASTN 2.2.28+
# Query: 2953408-2953538 NC_000964 [locus_tag=BSU_misc_RNA_47]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 1 hits found
2953408-2953538	gi|218230750|ref|NC_011725.1|	73.33	120	22	4	5	124	4540805	4540696	2e-11	64.4
# BLASTN 2.2.28+
# Query: 2961232-2961479 NC_000964 [locus_tag=BSU_misc_RNA_48]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 3 hits found
2961232-2961479	gi|218230750|ref|NC_011725.1|	72.57	113	29	1	7	119	1881206	1881316	2e-10	62.6
2961232-2961479	gi|218230750|ref|NC_011725.1|	72.22	108	28	1	12	119	1881559	1881664	7e-09	57.2
2961232-2961479	gi|218230750|ref|NC_011725.1|	68.65	185	40	8	44	221	4968607	4968434	9e-08	53.6
# BLASTN 2.2.28+
# Query: 3105153-3105367 NC_000964 [locus_tag=BSU_misc_RNA_49]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 2 hits found
3105153-3105367	gi|218230750|ref|NC_011725.1|	75.22	113	26	2	2	113	4697446	4697335	3e-13	71.6
3105153-3105367	gi|218230750|ref|NC_011725.1|	85.00	40	5	1	175	214	4697267	4697229	1e-04	42.8
# BLASTN 2.2.28+
# Query: 3129195-3129333 NC_000964 [locus_tag=BSU_misc_RNA_50]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 5 hits found
3129195-3129333	gi|218230750|ref|NC_011725.1|	97.96	49	1	0	1	49	4720095	4720047	3e-17	84.2
3129195-3129333	gi|218230750|ref|NC_011725.1|	86.00	50	6	1	1	50	174422	174374	1e-08	55.4
3129195-3129333	gi|218230750|ref|NC_011725.1|	85.71	49	6	1	2	50	3193780	3193733	5e-08	53.6
3129195-3129333	gi|218230750|ref|NC_011725.1|	84.31	51	7	1	1	50	4050170	4050120	5e-08	53.6
3129195-3129333	gi|218230750|ref|NC_011725.1|	91.18	34	3	0	16	49	385057	385024	2e-06	48.2
# BLASTN 2.2.28+
# Query: 3179105-3179206 NC_000964 [locus_tag=BSU_misc_RNA_51]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 2 hits found
3179105-3179206	gi|218230750|ref|NC_011725.1|	77.11	83	18	1	12	94	4763725	4763806	2e-10	60.8
3179105-3179206	gi|218230750|ref|NC_011725.1|	84.21	38	6	0	48	85	423049	423086	6e-05	42.8
# BLASTN 2.2.28+
# Query: 3188193-3188341 NC_000964 [locus_tag=BSU_misc_RNA_52]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 4 hits found
3188193-3188341	gi|218230750|ref|NC_011725.1|	78.89	90	13	3	64	149	770511	770598	7e-13	69.8
3188193-3188341	gi|218230750|ref|NC_011725.1|	77.27	88	14	3	64	146	769376	769462	3e-10	60.8
3188193-3188341	gi|218230750|ref|NC_011725.1|	76.19	84	16	2	64	146	3235248	3235328	4e-09	57.2
3188193-3188341	gi|218230750|ref|NC_011725.1|	77.50	80	14	3	66	143	1785289	1785366	5e-08	53.6
# BLASTN 2.2.28+
# Query: 3364397-3364503 NC_000964 [locus_tag=BSU_misc_RNA_53]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 12 hits found
3364397-3364503	gi|218230750|ref|NC_011725.1|	84.40	109	14	3	1	107	4938797	4938690	5e-25	 109
3364397-3364503	gi|218230750|ref|NC_011725.1|	82.05	78	11	3	2	76	4052364	4052441	2e-12	68.0
3364397-3364503	gi|218230750|ref|NC_011725.1|	79.49	78	12	2	1	74	4241630	4241553	2e-11	64.4
3364397-3364503	gi|218230750|ref|NC_011725.1|	85.42	48	7	0	1	48	174422	174375	1e-08	55.4
3364397-3364503	gi|218230750|ref|NC_011725.1|	85.11	47	7	0	2	48	3193780	3193734	3e-08	53.6
3364397-3364503	gi|218230750|ref|NC_011725.1|	86.36	44	5	1	5	47	194260	194217	4e-07	50.0
3364397-3364503	gi|218230750|ref|NC_011725.1|	84.44	45	7	0	4	48	385068	385024	4e-07	50.0
3364397-3364503	gi|218230750|ref|NC_011725.1|	85.11	47	6	1	3	48	1413831	1413877	4e-07	50.0
3364397-3364503	gi|218230750|ref|NC_011725.1|	85.11	47	6	1	3	48	2574903	2574949	4e-07	50.0
3364397-3364503	gi|218230750|ref|NC_011725.1|	84.44	45	6	1	2	45	3080585	3080541	5e-06	46.4
3364397-3364503	gi|218230750|ref|NC_011725.1|	85.71	35	5	0	2	36	333899	333933	2e-04	41.0
3364397-3364503	gi|218230750|ref|NC_011725.1|	81.25	48	7	2	2	47	5328532	5328485	8e-04	39.2
# BLASTN 2.2.28+
# Query: 3421169-3421348 NC_000964 [locus_tag=BSU_misc_RNA_54]
# Database: NC_011725.fna
# 0 hits found
# BLASTN 2.2.28+
# Query: 3450710-3451071 NC_000964 [gene=ssrA] [locus_tag=BSU_misc_RNA_55]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 1 hits found
3450710-3451071	gi|218230750|ref|NC_011725.1|	69.62	372	81	14	1	360	5042479	5042128	7e-30	 127
# BLASTN 2.2.28+
# Query: 3491322-3491557 NC_000964 [locus_tag=BSU_misc_RNA_56]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 1 hits found
3491322-3491557	gi|218230750|ref|NC_011725.1|	66.82	217	42	9	42	236	2103660	2103868	9e-08	53.6
# BLASTN 2.2.28+
# Query: 3856226-3856447 NC_000964 [locus_tag=BSU_misc_RNA_57]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 5 hits found
3856226-3856447	gi|218230750|ref|NC_011725.1|	72.81	217	48	7	12	221	2256062	2256274	5e-23	 104
3856226-3856447	gi|218230750|ref|NC_011725.1|	71.62	222	50	6	7	221	2256318	2256533	2e-22	 102
3856226-3856447	gi|218230750|ref|NC_011725.1|	82.54	63	9	2	10	70	1881209	1881271	7e-09	57.2
3856226-3856447	gi|218230750|ref|NC_011725.1|	81.97	61	9	2	12	70	1881559	1881619	8e-08	53.6
3856226-3856447	gi|218230750|ref|NC_011725.1|	73.33	90	21	2	10	96	4543223	4543134	3e-06	48.2
# BLASTN 2.2.28+
# Query: 3856479-3856700 NC_000964 [locus_tag=BSU_misc_RNA_58]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 5 hits found
3856479-3856700	gi|218230750|ref|NC_011725.1|	72.97	222	49	7	7	221	2256057	2256274	1e-24	 109
3856479-3856700	gi|218230750|ref|NC_011725.1|	72.07	222	49	6	7	221	2256318	2256533	1e-23	 105
3856479-3856700	gi|218230750|ref|NC_011725.1|	81.97	61	9	2	12	70	1881211	1881271	8e-08	53.6
3856479-3856700	gi|218230750|ref|NC_011725.1|	81.97	61	9	2	12	70	1881559	1881619	8e-08	53.6
3856479-3856700	gi|218230750|ref|NC_011725.1|	73.81	84	19	2	16	96	4543217	4543134	1e-05	46.4
# BLASTN 2.2.28+
# Query: 3946910-3947116 NC_000964 [locus_tag=BSU_misc_RNA_59]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 1 hits found
3946910-3947116	gi|218230750|ref|NC_011725.1|	74.29	70	17	1	37	106	4125886	4125954	1e-04	42.8
# BLASTN 2.2.28+
# Query: 3988840-3988942 NC_000964 [locus_tag=BSU_misc_RNA_60]
# Database: NC_011725.fna
# 0 hits found
# BLASTN 2.2.28+
# Query: 3997775-3997881 NC_000964 [locus_tag=BSU_misc_RNA_61]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 15 hits found
3997775-3997881	gi|218230750|ref|NC_011725.1|	77.14	105	18	3	4	102	385068	384964	4e-14	73.4
3997775-3997881	gi|218230750|ref|NC_011725.1|	75.96	104	15	3	3	105	3193779	3193685	1e-13	71.6
3997775-3997881	gi|218230750|ref|NC_011725.1|	91.49	47	4	0	3	49	174420	174374	2e-12	68.0
3997775-3997881	gi|218230750|ref|NC_011725.1|	95.45	44	1	1	3	45	3080584	3080541	2e-12	68.0
3997775-3997881	gi|218230750|ref|NC_011725.1|	91.67	48	3	1	3	49	4938795	4938748	5e-12	66.2
3997775-3997881	gi|218230750|ref|NC_011725.1|	80.77	78	11	3	3	78	5328531	5328456	2e-11	64.4
3997775-3997881	gi|218230750|ref|NC_011725.1|	93.18	44	2	1	5	47	194260	194217	7e-11	62.6
3997775-3997881	gi|218230750|ref|NC_011725.1|	87.04	54	6	1	3	55	333900	333953	7e-11	62.6
3997775-3997881	gi|218230750|ref|NC_011725.1|	89.13	46	4	1	3	47	182707	182752	3e-09	57.2
3997775-3997881	gi|218230750|ref|NC_011725.1|	87.50	48	5	1	3	49	4052365	4052412	3e-09	57.2
3997775-3997881	gi|218230750|ref|NC_011725.1|	77.92	77	13	3	3	77	1413831	1413905	3e-08	53.6
3997775-3997881	gi|218230750|ref|NC_011725.1|	88.64	44	4	1	3	45	1426594	1426637	3e-08	53.6
3997775-3997881	gi|218230750|ref|NC_011725.1|	78.12	64	9	1	3	66	4241628	4241570	3e-08	53.6
3997775-3997881	gi|218230750|ref|NC_011725.1|	84.00	50	7	1	3	51	2574903	2574952	1e-07	51.8
3997775-3997881	gi|218230750|ref|NC_011725.1|	85.11	47	6	1	3	48	4241836	4241882	4e-07	50.0
# BLASTN 2.2.28+
# Query: 3999166-3999272 NC_000964 [locus_tag=BSU_misc_RNA_62]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 15 hits found
3999166-3999272	gi|218230750|ref|NC_011725.1|	91.67	48	3	1	3	49	4938795	4938748	5e-12	66.2
3999166-3999272	gi|218230750|ref|NC_011725.1|	78.05	82	12	2	1	76	385071	384990	2e-11	64.4
3999166-3999272	gi|218230750|ref|NC_011725.1|	87.04	54	6	1	3	55	333900	333953	7e-11	62.6
3999166-3999272	gi|218230750|ref|NC_011725.1|	80.26	76	13	2	3	76	5328531	5328456	7e-11	62.6
3999166-3999272	gi|218230750|ref|NC_011725.1|	87.50	48	6	0	3	50	3193779	3193732	2e-10	60.8
3999166-3999272	gi|218230750|ref|NC_011725.1|	87.23	47	6	0	3	49	174420	174374	8e-10	59.0
3999166-3999272	gi|218230750|ref|NC_011725.1|	90.91	44	3	1	5	47	194260	194217	8e-10	59.0
3999166-3999272	gi|218230750|ref|NC_011725.1|	90.91	44	3	1	3	45	3080584	3080541	8e-10	59.0
3999166-3999272	gi|218230750|ref|NC_011725.1|	87.50	48	5	1	3	49	4052365	4052412	3e-09	57.2
3999166-3999272	gi|218230750|ref|NC_011725.1|	88.64	44	4	1	3	45	1426594	1426637	3e-08	53.6
3999166-3999272	gi|218230750|ref|NC_011725.1|	77.33	75	15	2	3	75	1413831	1413905	1e-07	51.8
3999166-3999272	gi|218230750|ref|NC_011725.1|	84.78	46	7	0	3	48	4241628	4241583	1e-07	51.8
3999166-3999272	gi|218230750|ref|NC_011725.1|	74.68	79	14	2	3	75	2574903	2574981	4e-07	50.0
3999166-3999272	gi|218230750|ref|NC_011725.1|	85.11	47	6	1	3	48	4241836	4241882	4e-07	50.0
3999166-3999272	gi|218230750|ref|NC_011725.1|	84.78	46	6	1	3	47	182707	182752	1e-06	48.2
# BLASTN 2.2.28+
# Query: 4005523-4005625 NC_000964 [locus_tag=BSU_misc_RNA_63]
# Database: NC_011725.fna
# Fields: query id, subject id, % identity, alignment length, mismatches, gap opens, q. start, q. end, s. start, s. end, evalue, bit score
# 1 hits found
4005523-4005625	gi|218230750|ref|NC_011725.1|	75.00	64	16	0	23	86	261170	261233	2e-05	44.6
# BLAST processed 62 queries