RID: NMA5T01A013 Job Title:Protein Sequence Program: BLASTP Query: unnamed protein product ID: lcl|Query_69671(amino acid) Length: 218 Database: swissprot Non-redundant UniProtKB/SwissProt sequences Sequences producing significant alignments: Scientific Common Max Total Query E Per. Acc. Description Name Name Taxid Score Score cover Value Ident Len Accession RecName: Full=Replicase polyprotein [Acute bee paralysis virus... Acute bee pa... NA 1217067 436 436 100% 5e-141 100.00 1906 Q9DSN9.1 RecName: Full=Replicase polyprotein; Contains: RecName:... Drosophila C... NA 865617 53.9 53.9 61% 3e-07 28.57 1759 O36966.1 RecName: Full=Replicase polyprotein; Contains: RecName:... Cricket para... NA 928300 41.6 41.6 59% 0.003 23.19 1771 Q9IJX4.1 RecName: Full=Genome polyprotein; Contains: RecName:... Rice tungro ... NA 337080 40.4 40.4 39% 0.009 28.87 3471 Q91PP5.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Avian enceph... NA 475778 38.5 38.5 91% 0.033 26.34 2134 Q9YLS4.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Caps... Avian enceph... NA 475779 38.5 38.5 91% 0.035 26.34 2134 Q6R325.1 Alignments: >RecName: Full=Replicase polyprotein [Acute bee paralysis virus strain Rothamsted] Sequence ID: Q9DSN9.1 Length: 1906 Range 1: 1126 to 1343 Score:436 bits(1121), Expect:5e-141, Method:Compositional matrix adjust., Identities:218/218(100%), Positives:218/218(100%), Gaps:0/218(0%) Query 1 QVAQKLITNRVLTNLYKICLVKENGDMVPLLNGLFVRSNIMLAPGHLVGFLSDSDTIEIR 60 QVAQKLITNRVLTNLYKICLVKENGDMVPLLNGLFVRSNIMLAPGHLVGFLSDSDTIEIR Sbjct 1126 QVAQKLITNRVLTNLYKICLVKENGDMVPLLNGLFVRSNIMLAPGHLVGFLSDSDTIEIR 1185 Query 61 NLFDVVFRVPWkdvkkvdvvNAFGESKEAVLLCFPKFVCQHTDLVKHFQDSESMSKFKRC 120 NLFDVVFRVPWKDVKKVDVVNAFGESKEAVLLCFPKFVCQHTDLVKHFQDSESMSKFKRC Sbjct 1186 NLFDVVFRVPWKDVKKVDVVNAFGESKEAVLLCFPKFVCQHTDLVKHFQDSESMSKFKRC 1245 Query 121 EVTLPVLRYSDKMNRFLATLIECDKVEAYDRPYTLNDSSKGQYILRQGLEYTMPTTNGDC 180 EVTLPVLRYSDKMNRFLATLIECDKVEAYDRPYTLNDSSKGQYILRQGLEYTMPTTNGDC Sbjct 1246 EVTLPVLRYSDKMNRFLATLIECDKVEAYDRPYTLNDSSKGQYILRQGLEYTMPTTNGDC 1305 Query 181 GAPLVINETQVIRKIAGIHVAGDARGKAYAESISQKDL 218 GAPLVINETQVIRKIAGIHVAGDARGKAYAESISQKDL Sbjct 1306 GAPLVINETQVIRKIAGIHVAGDARGKAYAESISQKDL 1343 >RecName: Full=Replicase polyprotein; Contains: RecName: Full=Protein 1A; Contains: RecName: Full=Protein 2A; Contains: RecName: Full=Protein 2B; Contains: RecName: Full=Protein 2C; Contains: RecName: Full=Protein 3A; Contains: RecName: Full=Protein 3B; Contains: RecName: Full=3C-like protease; Contains: RecName: Full=RNA-directed RNA polymerase 3D-POL [Drosophila C virus strain EB] Sequence ID: O36966.1 Length: 1759 Range 1: 1050 to 1189 Score:53.9 bits(128), Expect:3e-07, Method:Compositional matrix adjust., Identities:40/140(29%), Positives:63/140(45%), Gaps:7/140(5%) Query 84 GESKEAVLLCFPKFVCQ-HTDLVKHFQDSESMSKFKRCEVTLPVLRYSDKMN-----RFL 137 G+ ++ V++ +C H DLV+HF + K K + + M +L Sbjct 1050 GDFRDCVMVNLHSRMCTPHRDLVRHFILTSDQGKLKGSFSGAMATFHVNNMGLYRVYNWL 1109 Query 138 ATLIECDKVEAYDRPYTLNDSSKGQYILRQGLEYTMPTTNGDCGAPLVINETQVIRKIAG 197 + CDK P + + YI R EY PT GDCG+ + + + RKI G Sbjct 1110 NAVRPCDKKIEIFHPEDGFEYPEESYIQRDCYEYNAPTRTGDCGSIIGLYNKYLERKIIG 1169 Query 198 IHVAG-DARGKAYAESISQK 216 +H+AG DA YA ++Q+ Sbjct 1170 MHIAGNDAEEHGYACPLTQE 1189 >RecName: Full=Replicase polyprotein; Contains: RecName: Full=Protein 1A; AltName: Full=CrPV-1A; Contains: RecName: Full=Protein 2A; Contains: RecName: Full=Protein 2B; Contains: RecName: Full=Protein 2C; Contains: RecName: Full=Protein 3A; Contains: RecName: Full=Protein 3B; Contains: RecName: Full=3C-like protease; Contains: RecName: Full=RNA-directed RNA polymerase 3D-POL [Cricket paralysis virus Teleogryllus commodus/Australia/CrPVVIC/1968] Sequence ID: Q9IJX4.1 Length: 1771 Range 1: 1062 to 1199 Score:41.6 bits(96), Expect:0.003, Method:Compositional matrix adjust., Identities:32/138(23%), Positives:62/138(44%), Gaps:8/138(5%) Query 87 KEAVLLCFPKFVCQ-HTDLVKHFQDSESMSKFKRC-EVTLPVLRYSD----KMNRFLATL 140 ++ VL+ + +C H D++KHF + + TL S + ++L + Sbjct 1062 RDCVLVNLHRRMCHPHRDILKHFVKKSDQGNLRGVFQGTLATFHQSANELCRAYQWLQAI 1121 Query 141 IECDK-VEAYDRPYTLNDSSKGQYILRQGLEYTMPTTNGDCGAPLVINETQVIRKIAGIH 199 D+ + Y + D Y R EY PT G+CG+ + + ++ RK+ G+H Sbjct 1122 RPLDQEITIYHEDTDMFDYESESYTQRDCYEYNAPTQTGNCGSIVGLYNKRMERKLIGMH 1181 Query 200 VAGD-ARGKAYAESISQK 216 + G+ + YA ++Q+ Sbjct 1182 IPGNVSECHGYACPLTQE 1199 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Putative leader protein; Contains: RecName: Full=Capsid protein 1; Short=CP-1; AltName: Full=22.5 kDa protein; AltName: Full=Coat protein 1; Contains: RecName: Full=Capsid protein 2; Short=CP-2; AltName: Full=26 kDa protein; AltName: Full=Coat protein 2; Contains: RecName: Full=Capsid protein 3; Short=CP-3; AltName: Full=31 kDa protein; AltName: Full=Coat protein 3; Contains: RecName: Full=Putative helicase; AltName: Full=Putative NTP-binding protein; Contains: RecName: Full=Probable picornain 3C-like protease; Short=3C-like protease; Contains: RecName: Full=Probable RNA-directed RNA polymerase [Rice tungro spherical virus (isolate Vt6)] Sequence ID: Q91PP5.1 Length: 3471 Range 1: 2752 to 2847 Score:40.4 bits(93), Expect:0.009, Method:Compositional matrix adjust., Identities:28/97(29%), Positives:53/97(54%), Gaps:12/97(12%) Query 133 MNRFLA-TLIEC----DKVEAYDR----PYTLNDSSKGQYILRQGLEYTMPTTNGDCGAP 183 M+++L ++++C D +E + P + +++ G + + GL Y + G CGA Sbjct 2752 MSKYLVDSMLQCVHFLDSIELTEANVSVPTSYYEANGGIHTIISGLRYRVHCMPGFCGAA 2811 Query 184 LVINETQVIRKIAGIHVAGDARGK--AYAESISQKDL 218 ++ + RKI G+HV+G R K YAE+++Q+ L Sbjct 2812 IMRADATCYRKIIGMHVSG-LRNKCMGYAETLTQEHL 2847 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein VP0; AltName: Full=VP4-VP2; Contains: RecName: Full=Capsid protein VP4; AltName: Full=P1A; AltName: Full=Virion protein 4; Contains: RecName: Full=Capsid protein VP2; AltName: Full=P1B; AltName: Full=Virion protein 2; Contains: RecName: Full=Capsid protein VP3; AltName: Full=P1C; AltName: Full=Virion protein 3; Contains: RecName: Full=Capsid protein VP1; AltName: Full=P1D; AltName: Full=Virion protein 1; Contains: RecName: Full=Protein 2A; Short=P2A; Contains: RecName: Full=Protein 2B; Short=P2B; Contains: RecName: Full=Protein 2C; Short=P2C; Contains: RecName: Full=Protein 3A; Short=P3A; Contains: RecName: Full=Protein 3B; Short=P3B; AltName: Full=VPg; Contains: RecName: Full=Protease 3C; Short=P3C; AltName: Full=Picornain 3C; Contains: RecName: Full=RNA-directed RNA polymerase 3D-POL; Short=P3D-POL [Avian encephalomyelitis virus strain Calnek] Sequence ID: Q9YLS4.1 Length: 2134 Range 1: 1438 to 1629 Score:38.5 bits(88), Expect:0.033, Method:Compositional matrix adjust., Identities:54/205(26%), Positives:81/205(39%), Gaps:18/205(8%) Query 7 ITNRVLTNLYKICLVKENGDMVPLLNGLFVRSNIMLAPGHLVGFLSDSDTIEIRNLFDVV 66 I+N V NL ++ + + L NGL V +L P H + D + I + Sbjct 1438 ISNVVHGNLVRVGVGPNEARIHWLYNGLGVYDTYILMPYHGIKDADVDDDLYIERAGTI- 1496 Query 67 FRVPWkdvkkvdvvNAFGESKEA--VLLCFPKFVCQHTDLVKHFQDSESMSKFKRCEVTL 124 V F ES+E VL+ P+ + + D+ HF E++ + + TL Sbjct 1497 -----YSTNMKMVQVLFLESREGDLVLINVPR-LPKFRDIRNHFSTEENIRRAEGMPGTL 1550 Query 125 PVLRYSDKMNRF-LATLIECDKVEAYDRPYTLNDSSKGQYILRQGLEYTMP--TTNGDCG 181 L + RF L T + VEA Y D + + G + T G CG Sbjct 1551 CTLDH----ERFTLVTESDLKMVEA--ATYVCEDDKGVRTDISVGRSWKAKACTVAGMCG 1604 Query 182 APLVINETQVIRKIAGIHVAGDARG 206 LV + ++ I GIHVAG A Sbjct 1605 GALVTSNNKMQNAIVGIHVAGGAHA 1629 >RecName: Full=Genome polyprotein; Contains: RecName: Full=Capsid protein VP0; AltName: Full=VP4-VP2; Contains: RecName: Full=Capsid protein VP4; AltName: Full=P1A; AltName: Full=Virion protein 4; Contains: RecName: Full=Capsid protein VP2; AltName: Full=P1B; AltName: Full=Virion protein 2; Contains: RecName: Full=Capsid protein VP3; AltName: Full=P1C; AltName: Full=Virion protein 3; Contains: RecName: Full=Capsid protein VP1; AltName: Full=P1D; AltName: Full=Virion protein 1; Contains: RecName: Full=Protein 2A; Short=P2A; Contains: RecName: Full=Protein 2B; Short=P2B; Contains: RecName: Full=Protein 2C; Short=P2C; Contains: RecName: Full=Protein 3A; Short=P3A; Contains: RecName: Full=Protein 3B; Short=P3B; AltName: Full=VPg; Contains: RecName: Full=Protease 3C; Short=P3C; AltName: Full=Picornain 3C; Contains: RecName: Full=RNA-directed RNA polymerase 3D-POL; Short=P3D-POL [Avian encephalomyelitis virus strain Van Reokel] Sequence ID: Q6R325.1 Length: 2134 Range 1: 1438 to 1629 Score:38.5 bits(88), Expect:0.035, Method:Compositional matrix adjust., Identities:54/205(26%), Positives:81/205(39%), Gaps:18/205(8%) Query 7 ITNRVLTNLYKICLVKENGDMVPLLNGLFVRSNIMLAPGHLVGFLSDSDTIEIRNLFDVV 66 I+N V NL ++ + + L NGL V +L P H + D + I + Sbjct 1438 ISNVVHGNLVRVGVGPNEARIHWLYNGLGVYDTYILMPYHGIKDADVDDDLYIERAGTI- 1496 Query 67 FRVPWkdvkkvdvvNAFGESKEA--VLLCFPKFVCQHTDLVKHFQDSESMSKFKRCEVTL 124 V F ES+E VL+ P+ + + D+ HF E++ + + TL Sbjct 1497 -----YSTNMKMVQVLFLESREGDLVLINVPR-LPKFRDIRNHFSTEENIRRAEGMPGTL 1550 Query 125 PVLRYSDKMNRF-LATLIECDKVEAYDRPYTLNDSSKGQYILRQGLEYTMP--TTNGDCG 181 L + RF L T + VEA Y D + + G + T G CG Sbjct 1551 CTLDH----ERFTLVTESDLKMVEA--ATYVCEDDKGVRTDISVGRSWKAKACTVAGMCG 1604 Query 182 APLVINETQVIRKIAGIHVAGDARG 206 LV + ++ I GIHVAG A Sbjct 1605 GALVTSNNKMQNAIVGIHVAGGAHA 1629