######################################## # Program: needle # Rundate: Tue Apr 18 2006 15:59:23 # Align_format: srspair # Report_file: 1to3.needle ######################################## #======================================= # # Aligned_sequences: 2 # 1: aroG_ECOLI # 2: pieX_ECOLI # Matrix: EBLOSUM62 # Gap_penalty: 10.0 # Extend_penalty: 0.5 # # Length: 350 # Identity: 23/350 ( 6.6%) # Similarity: 24/350 ( 6.9%) # Gaps: 326/350 (93.1%) # Score: 70.5 # # #======================================= aroG_ECOLI 1 MNYQNDDLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIHKILKGN 50 pieX_ECOLI 1 -------------------------------------------------- 0 aroG_ECOLI 51 DDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRT 100 pieX_ECOLI 1 -------------------------------------------------- 0 aroG_ECOLI 101 TVGWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAAGEFLDMITP 150 pieX_ECOLI 1 -------------------------------------------------- 0 aroG_ECOLI 151 QYLADLMSWGAIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAI 200 :||||||||||| pieX_ECOLI 1 --MADLMSWGAIGA------------------------------------ 12 aroG_ECOLI 201 NAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKEPNYSAKHVAEVK 250 |||||| pieX_ECOLI 13 --------------------------------------------HVAEVK 18 aroG_ECOLI 251 EGLNKAGLPAQVMIDFSHANSSKQFKKQMDVCADVCQQIAGGEKAIIGVM 300 |||||| pieX_ECOLI 19 EGLNKA-------------------------------------------- 24 aroG_ECOLI 301 VESHLVEGNQSLESGEPLAYGKSITDACIGWEDTDALLRQLANAVKARRG 350 pieX_ECOLI 25 -------------------------------------------------- 24 #--------------------------------------- #---------------------------------------