Практикум 1. Филогенетические деревья

Для анализа был выбран инфракласс Teleostei (костистые рыбы).

Таблица 1. Некоторые представители Teleostei

Вид Таксономия Мнемонический код
Allocyttus niger Eumetazoa > Bilateria > Deuterostomia > Chordata (chordates) > Craniata > Vertebrata (vertebrates) > Gnathostomata (jawed vertebrates) > Teleostomi > Euteleostomi (bony vertebrates) > Actinopterygii (ray-finned fishes) > Actinopteri > Neopterygii > Teleostei (teleost fishes) > Osteoglossocephalai > Clupeocephala > Euteleosteomorpha > Neoteleostei > Eurypterygia > Ctenosquamata > Acanthomorphata > Paracanthopterygii > Zeiogadaria > Zeariae > Zeiformes (dories and others) > Oreosomatidae (oreos) > Allocyttus ALLNG
Anguilla interioris Eumetazoa > Bilateria > Deuterostomia > Chordata (chordates) > Craniata > Vertebrata (vertebrates) > Gnathostomata (jawed vertebrates) > Teleostomi > Euteleostomi (bony vertebrates) > Actinopterygii (ray-finned fishes) > Actinopteri > Neopterygii > Teleostei (teleost fishes) > Elopocephalai > Elopocephala > Elopomorpha > Anguilliformes (true eels) > Anguillidae (freshwater eels) > Anguilla ANGIN
Anoplogaster cornuta Eumetazoa > Bilateria > Deuterostomia > Chordata (chordates) > Craniata > Vertebrata (vertebrates) > Gnathostomata (jawed vertebrates) > Teleostomi > Euteleostomi (bony vertebrates) > Actinopterygii (ray-finned fishes) > Actinopteri > Neopterygii > Teleostei (teleost fishes) > Osteoglossocephalai > Clupeocephala > Euteleosteomorpha > Neoteleostei > Eurypterygia > Ctenosquamata > Acanthomorphata > Euacanthomorphacea > Berycimorphaceae > Trachichthyiformes (slimeheads and others) > Anoplogasteridae > Anoplogaster ANOCO
Astronotus ocellatus Eumetazoa > Bilateria > Deuterostomia > Chordata (chordates) > Craniata > Vertebrata (vertebrates) > Gnathostomata (jawed vertebrates) > Teleostomi > Euteleostomi (bony vertebrates) > Actinopterygii (ray-finned fishes) > Actinopteri > Neopterygii > Teleostei (teleost fishes) > Osteoglossocephalai > Clupeocephala > Euteleosteomorpha > Neoteleostei > Eurypterygia > Ctenosquamata > Acanthomorphata > Euacanthomorphacea > Percomorphaceae > Ovalentaria > Cichlomorphae > Cichliformes (cichlids and convict blennies) > Cichlidae (cichlids) > New World cichlids > Astronotinae > Astronotini > Astronotus ASTOC
Dactyloptena peterseni Eumetazoa > Bilateria > Deuterostomia > Chordata (chordates) > Craniata > Vertebrata (vertebrates) > Gnathostomata (jawed vertebrates) > Teleostomi > Euteleostomi (bony vertebrates) > Actinopterygii (ray-finned fishes) > Actinopteri > Neopterygii > Teleostei (teleost fishes) > Osteoglossocephalai > Clupeocephala > Euteleosteomorpha > Neoteleostei > Eurypterygia > Ctenosquamata > Acanthomorphata > Euacanthomorphacea > Percomorphaceae > Syngnathiaria > Syngnathiformes (pipefishes and seahorses) > Dactylopteroidei > Dactylopteridae (flying gurnards) > Dactyloptena DACPE
Danio rerio Eumetazoa > Bilateria > Deuterostomia > Chordata (chordates) > Craniata > Vertebrata (vertebrates) > Gnathostomata (jawed vertebrates) > Teleostomi > Euteleostomi (bony vertebrates) > Actinopterygii (ray-finned fishes) > Actinopteri > Neopterygii > Teleostei (teleost fishes) > Osteoglossocephalai > Clupeocephala > Otomorpha > Ostariophysi > Otophysi > Cypriniphysae > Cypriniformes (carps and others) > Cyprinoidei > Danionidae > Danioninae > Danio DANRE
Indostomus paradoxus Eumetazoa > Bilateria > Deuterostomia > Chordata (chordates) > Craniata > Vertebrata (vertebrates) > Gnathostomata (jawed vertebrates) > Teleostomi > Euteleostomi (bony vertebrates) > Actinopterygii (ray-finned fishes) > Actinopteri > Neopterygii > Teleostei (teleost fishes) > Osteoglossocephalai > Clupeocephala > Euteleosteomorpha > Neoteleostei > Eurypterygia > Ctenosquamata > Acanthomorphata > Euacanthomorphacea > Percomorphaceae > Anabantaria > Synbranchiformes (swamp eels and others) > Indostomoidei > Indostomidae > Indostomus INDPA
Pethia conchonius Eumetazoa > Bilateria > Deuterostomia > Chordata (chordates) > Craniata > Vertebrata (vertebrates) > Gnathostomata (jawed vertebrates) > Teleostomi > Euteleostomi (bony vertebrates) > Actinopterygii (ray-finned fishes) > Actinopteri > Neopterygii > Teleostei (teleost fishes) > Osteoglossocephalai > Clupeocephala > Otomorpha > Ostariophysi > Otophysi > Cypriniphysae > Cypriniformes (carps and others) > Cyprinoidei > Cyprinidae > Smiliogastrinae > Pethia PETCC
Poeciliopsis occidentalis Eumetazoa > Bilateria > Deuterostomia > Chordata (chordates) > Craniata > Vertebrata (vertebrates) > Gnathostomata (jawed vertebrates) > Teleostomi > Euteleostomi (bony vertebrates) > Actinopterygii (ray-finned fishes) > Actinopteri > Neopterygii > Teleostei (teleost fishes) > Osteoglossocephalai > Clupeocephala > Euteleosteomorpha > Neoteleostei > Eurypterygia > Ctenosquamata > Acanthomorphata > Euacanthomorphacea > Percomorphaceae > Ovalentaria > Atherinomorphae > Cyprinodontiformes (killifishes and others) > Cyprinodontoidei > Poeciliidae (livebearers) > Poeciliinae > Poeciliopsis POEOC
Tetraodon nigroviridis Eumetazoa > Bilateria > Deuterostomia > Chordata (chordates) > Craniata > Vertebrata (vertebrates) > Gnathostomata (jawed vertebrates) > Teleostomi > Euteleostomi (bony vertebrates) > Actinopterygii (ray-finned fishes) > Actinopteri > Neopterygii > Teleostei (teleost fishes) > Osteoglossocephalai > Clupeocephala > Euteleosteomorpha > Neoteleostei > Eurypterygia > Ctenosquamata > Acanthomorphata > Euacanthomorphacea > Percomorphaceae > Eupercaria > Tetraodontiformes (pufferfishes and others) > Tetraodontoidei > Tetradontoidea > Tetraodontidae (puffers) > Tetraodon TETNG

Скобочная формула:
(((ALLNG,(ANOCO,((DACPE),(INDPA),(TETNG),(POEOC,ASTOC))))),(DANRE,PETCC),(ANGIN))
Для удобочитаемости использовались мнемонические коды.

Рис.1. Филогенетическое дерево для некоторых видов инфракласса Teleostei
Филогенетическое дерево