RID: 8S6PH5DD014 Job Title:P47908 Program: BLASTP Query: unnamed protein product ID: lcl|Query_2824751(amino acid) Length: 193 Database: swissprot Non-redundant UniProtKB/SwissProt sequences Sequences producing significant alignments: Sequences with E-value BETTER than threshold Scientific Common Max Total Query E Per. Acc. Description Name Name Taxid Score Score cover Value Ident Len Accession RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Picosynechoc... NA 32049 399 399 100% 3e-143 100.00 193 P47908.2 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Synechocysti... NA 1111708 315 315 97% 3e-110 81.38 191 P74518.1 RecName: Full=Ribosome-binding factor PSRP1, chloroplastic;... Spinacia ole... spinach 3562 137 137 99% 7e-39 39.15 302 P19954.2 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Staphylococc... NA 396513 119 119 97% 8e-33 34.04 188 P47995.2 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Listeria mon... NA 393133 115 115 97% 1e-31 40.21 187 A0A0H3GEZ8.1 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Streptococcu... NA 286636 114 114 98% 5e-31 36.46 182 Q5XAQ7.1 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Lactococcus ... NA 416870 112 112 97% 2e-30 35.64 185 A2RIX0.1 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Staphylococc... NA 279808 113 113 97% 2e-30 33.68 192 Q4L4H7.1 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Staphylococc... NA 93062 109 109 97% 5e-29 31.84 190 Q5HHR8.1 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Staphylococc... NA 176279 108 108 97% 1e-28 31.05 189 Q5HQX7.1 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Staphylococc... NA 367830 108 108 97% 1e-28 31.84 190 Q2FIN9.1 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Bacillus sub... NA 224308 106 106 97% 7e-28 34.38 189 P28368.2 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Staphylococc... NA 342451 102 102 97% 2e-26 30.93 190 Q49VV1.1 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Deinococcus ... NA 243230 95.9 95.9 94% 1e-23 34.04 191 Q9RVE7.1 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Mycobacteriu... NA 83332 92.4 92.4 96% 4e-22 29.21 219 O05886.4 RecName: Full=Ribosome hibernation promoting factor; Short=HPF... Azotobacter ... NA 354 65.9 65.9 53% 3e-13 36.27 107 P17160.1 RecName: Full=Ribosome hibernation promoting factor; Short=HPF... Cupriavidus ... NA 381666 61.2 61.2 52% 2e-11 35.00 116 P28613.2 RecName: Full=Ribosome hibernation promoting factor; Short=HPF... Escherichia ... NA 83333 59.7 59.7 50% 6e-11 37.11 95 P0AFX0.1 RecName: Full=Ribosome hibernation promoting factor; Short=HPF... Salmonella e... NA 99287 57.8 57.8 50% 3e-10 35.05 95 P26983.1 RecName: Full=Ribosome hibernation promoting factor; Short=HPF... Pseudomonas ... NA 160488 55.5 55.5 51% 2e-09 35.71 102 P0A147.1 RecName: Full=Ribosome hibernation promoting factor; Short=HPF... Klebsiella o... NA 571 53.5 53.5 50% 1e-08 34.02 95 P17161.1 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Sinorhizobiu... NA 266834 54.3 54.3 96% 4e-08 24.37 190 P17265.2 RecName: Full=Ribosome hibernation promoting factor; Short=HPF... Acinetobacte... NA 106649 42.4 42.4 50% 2e-04 26.00 113 P33987.1 RecName: Full=Ribosome hibernation promotion factor; Short=HPF... Bradyrhizobi... NA 224911 40.0 40.0 97% 0.004 19.40 203 P30334.1 Sequences with E-value WORSE than threshold Alignments: >RecName: Full=Ribosome hibernation promotion factor; Short=HPF; AltName: Full=Dark-response protein 21; Short=DRP-21; AltName: Full=Light-repressed protein A [Picosynechococcus sp. PCC 7002] Sequence ID: P47908.2 Length: 193 Range 1: 1 to 193 Score:399 bits(1025), Expect:3e-143, Method:Compositional matrix adjust., Identities:193/193(100%), Positives:193/193(100%), Gaps:0/193(0%) Query 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNARITDKHKAEVTV 60 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNARITDKHKAEVTV Sbjct 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNARITDKHKAEVTV 60 Query 61 YANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHVQEKTSEVLPEDPVPD 120 YANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHVQEKTSEVLPEDPVPD Sbjct 61 YANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHVQEKTSEVLPEDPVPD 120 Query 121 NLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNKDTNAINVIYIRNH 180 NLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNKDTNAINVIYIRNH Sbjct 121 NLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNKDTNAINVIYIRNH 180 Query 181 GGYGVIQPRLGKE 193 GGYGVIQPRLGKE Sbjct 181 GGYGVIQPRLGKE 193 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF; AltName: Full=Light-repressed protein A [Synechocystis sp. PCC 6803 substr. Kazusa] Sequence ID: P74518.1 Length: 191 Range 1: 1 to 187 Score:315 bits(808), Expect:3e-110, Method:Compositional matrix adjust., Identities:153/188(81%), Positives:167/188(88%), Gaps:1/188(0%) Query 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNARITDKHKAEVTV 60 MKLLIQGNNI VTE+IHDYVE K+E+A KHFQ TKVDVHLSVA NARIT+KHKAEVTV Sbjct 1 MKLLIQGNNITVTEAIHDYVEEKVERAVKHFQNLTTKVDVHLSVARNARITNKHKAEVTV 60 Query 61 YANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHVQEKTSEVLPEDPVPD 120 YANGTVIRAQEGSENLYASIDLV+DKIARQLRKYKE+ K H KTSE++ + PV + Sbjct 61 YANGTVIRAQEGSENLYASIDLVADKIARQLRKYKER-IQDKQHGNVKTSEIVEDKPVEE 119 Query 121 NLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNKDTNAINVIYIRNH 180 NLIGDRAPELPSEV+RMKYFAMPPM I++ALEQLQLVDHDFYMF NKDT+ INVIYIRNH Sbjct 120 NLIGDRAPELPSEVLRMKYFAMPPMAIEDALEQLQLVDHDFYMFRNKDTDEINVIYIRNH 179 Query 181 GGYGVIQP 188 GGYGVIQP Sbjct 180 GGYGVIQP 187 >RecName: Full=Ribosome-binding factor PSRP1, chloroplastic; AltName: Full=30S ribosomal protein 1; AltName: Full=CS-S5; Short=CS5; AltName: Full=Plastid-specific 30S ribosomal protein 1; Short=PSrp-1; AltName: Full=Ribosomal protein 1; AltName: Full=S22; AltName: Full=Translation factor pY; Flags: Precursor [Spinacia oleracea] Sequence ID: P19954.2 Length: 302 Range 1: 75 to 283 Score:137 bits(346), Expect:7e-39, Method:Compositional matrix adjust., Identities:83/212(39%), Positives:122/212(57%), Gaps:23/212(10%) Query 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANN--ARITDKHKAEV 58 +KL++QG N+ V++++ +VE K+ K+ +VDV LS ++ + EV Sbjct 75 VKLILQGRNLEVSDNVRSHVEDKVGKSVAKHSHLVREVDVRLSARGGDLSKGPKLRRCEV 134 Query 59 TVYANG-TVIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHV------------ 105 T++ VIRA+E +E+LY+SIDLVS I R+LRK K+K H+ Sbjct 135 TLFTKRHGVIRAEEDAESLYSSIDLVSSIIQRKLRKIKDKVSDHGRHMKGFNRSKVRDPE 194 Query 106 -----QEKTSEVLPEDPVPDNLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHD 160 +E+ E + P P ++ D + EVVR KYF MPP+TI EA+EQL+ VDHD Sbjct 195 PVRITREEVLEEVESAPAPVSVEDD---DFIEEVVRTKYFDMPPLTITEAVEQLENVDHD 251 Query 161 FYMFLNKDTNAINVIYIRNHGGYGVIQPRLGK 192 FY F N++T IN++Y R GGYG+I P+ GK Sbjct 252 FYAFRNEETGDINILYKRKEGGYGLIIPKDGK 283 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus carnosus subsp. carnosus TM300] Sequence ID: P47995.2 Length: 188 Range 1: 2 to 184 Score:119 bits(297), Expect:8e-33, Method:Compositional matrix adjust., Identities:64/188(34%), Positives:115/188(61%), Gaps:6/188(3%) Query 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNARITDKHKAEVTV 60 ++ I G+N+ +T++I +Y+E K+ K ++F T V+ H+ V A K EVT+ Sbjct 2 IRFEIHGDNLTITDAIRNYIEDKVGKLERYF-TNVPNVNAHVKVKTYA--NSSTKIEVTI 58 Query 61 YANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEK-NFGKKTHVQEKTSEVLPEDPVP 119 N +RA+E +++LYA IDL+++K+ RQ+RKYK + N K+ + + PE P Sbjct 59 PLNDVTLRAEERNDDLYAGIDLITNKLERQVRKYKTRVNRKKRKESEHEPFPATPETPPE 118 Query 120 DNLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNKDTNAINVIYIRN 179 + D+ E+ E++R K F++ PM +EA+ Q+ L+ HDF++F +++T+ +++Y R Sbjct 119 TAVDHDKDDEI--EIIRSKQFSLKPMDSEEAVLQMDLLGHDFFIFNDRETDGTSIVYRRK 176 Query 180 HGGYGVIQ 187 G YG+I+ Sbjct 177 DGKYGLIE 184 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF; AltName: Full=Ribosome hibernation-promoting factor [Listeria monocytogenes 10403S] Sequence ID: A0A0H3GEZ8.1 Length: 187 Range 1: 2 to 185 Score:115 bits(289), Expect:1e-31, Method:Compositional matrix adjust., Identities:78/194(40%), Positives:115/194(59%), Gaps:17/194(8%) Query 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHF-QTFATKVDVHLSVANNARITDKH-KAEV 58 +K I+G NI VTE I DYVE K++K ++F +T V V+L V +DK+ K EV Sbjct 2 LKYNIRGENIEVTEPIRDYVEKKIDKLERYFTETPDANVHVNLKV-----YSDKNAKVEV 56 Query 59 TVYANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEK---NFGKKTHVQE--KTSEVL 113 T+ V+RA+E S +LYASIDL+ DK+ RQ+RK+K K F K ++ S+V Sbjct 57 TIPLPNLVLRAEETSGDLYASIDLIVDKLERQIRKHKTKVNRKFRDKGAERDYFAYSDVN 116 Query 114 PEDPVPDNLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNKDTNAIN 173 P P+ GD E+VR K F++ PM +EA+ Q+ L+ H FY++ + +TN N Sbjct 117 GSTP-PEENEGD----FDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFYVYTDAETNGTN 171 Query 174 VIYIRNHGGYGVIQ 187 ++Y R G YG+I+ Sbjct 172 IVYSRKDGKYGLIE 185 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF; AltName: Full=Ribosome-associated factor Y [Streptococcus pyogenes MGAS10394] Sequence ID: Q5XAQ7.1 Length: 182 Range 1: 2 to 182 Score:114 bits(285), Expect:5e-31, Method:Compositional matrix adjust., Identities:70/192(36%), Positives:112/192(58%), Gaps:14/192(7%) Query 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHF---QTFATKVDVHLSVANNARITDKHKAE 57 +K I+G NI VTE+I DYVESKL K K+F Q +V++ + ++ K E Sbjct 2 IKFSIRGENIEVTEAIRDYVESKLTKIEKYFAKDQEIDARVNLKVYRERSS------KVE 55 Query 58 VTVYANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHVQEKTSEVLPEDP 117 VT+ + +RA++ S+++Y SIDLV DKI RQ+RK K K KK + T +V + Sbjct 56 VTIPLDSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTK-IAKKHREKVPTGQVFTTEF 114 Query 118 VPDNLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNKDTNAINVIYI 177 + + D PE+ +VVR K + PM ++EA Q++L+ HDF+++ + + A N++Y Sbjct 115 EAEEV--DEIPEV--QVVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDSEDGATNILYR 170 Query 178 RNHGGYGVIQPR 189 R G G+I+ + Sbjct 171 REDGNLGLIEAK 182 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF; AltName: Full=Lactococcus lactis hibernation promotion factor; Short=LIHPF [Lactococcus cremoris subsp. cremoris MG1363] Sequence ID: A2RIX0.1 Length: 185 Range 1: 2 to 183 Score:112 bits(281), Expect:2e-30, Method:Compositional matrix adjust., Identities:67/188(36%), Positives:108/188(57%), Gaps:7/188(3%) Query 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQT-FATKVDVHLSVANNARITDKHKAEVT 59 +K I+G N+ VT++I YVE K+ K K+F V+L V R K EVT Sbjct 2 IKFNIRGENVEVTDAIRAYVEDKIGKLDKYFNDGHEVTAYVNLKVYTEKRA----KVEVT 57 Query 60 VYANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHVQEKTSEVLPEDPVP 119 + A +RA++ S+++Y+SID V +K+ RQ+RKYK + +K T +V ++ P Sbjct 58 LPAKNVTLRAEDTSQDMYSSIDFVEEKLERQIRKYKTR-MNRKPRNAVPTGQVFGDEFAP 116 Query 120 DNLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNKDTNAINVIYIRN 179 + D E ++VR K+ A+ PM +EA+ Q+ ++ HDFY+F + D+N +V+Y R Sbjct 117 LDTT-DEVAEDHVDIVRTKHVALKPMDAEEAVLQMDMLGHDFYVFTDADSNGTHVVYRRT 175 Query 180 HGGYGVIQ 187 G YG+I+ Sbjct 176 DGRYGLIE 183 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus haemolyticus JCSC1435] Sequence ID: Q4L4H7.1 Length: 192 Range 1: 2 to 189 Score:113 bits(282), Expect:2e-30, Method:Compositional matrix adjust., Identities:65/193(34%), Positives:113/193(58%), Gaps:11/193(5%) Query 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNARITDKHKAEVTV 60 ++ I G+N+ +T++I +Y+E K+ K ++F V H+ V T K EVT+ Sbjct 2 IRFEIHGDNLTITDAIRNYIEDKIGKLERYFNDVPNAV-AHVKVKTYQNSTTK--IEVTI 58 Query 61 YANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEK-NFGKKTHVQEKTSEVLPEDPVP 119 +RA+E ++LYA IDLV+ K+ RQ+RKYK + N KTH + + ++ P Sbjct 59 PLKNVTLRAEERHDDLYAGIDLVTSKLERQVRKYKTRVNRKHKTHGEPEAFVAEVQEAPP 118 Query 120 DNLIGDRAPELPS-----EVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNKDTNAINV 174 +N+ D P+ E++R K F++ PM +EA+ Q++L+ HDFY+F +++T+ ++ Sbjct 119 ENV--DDVNAEPTNDSEIEIIRSKQFSLKPMDSEEAVLQMELLGHDFYIFTDRETDGTSI 176 Query 175 IYIRNHGGYGVIQ 187 +Y R G YG+I+ Sbjct 177 VYKRKDGKYGLIE 189 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus aureus subsp. aureus COL] Sequence ID: Q5HHR8.1 Length: 190 Range 1: 2 to 186 Score:109 bits(272), Expect:5e-29, Method:Compositional matrix adjust., Identities:64/201(32%), Positives:114/201(56%), Gaps:30/201(14%) Query 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSV---ANNARITDKHKAE 57 ++ I G+N+ +T++I +Y+E K+ K ++F V H+ V +N+A K E Sbjct 2 IRFEIHGDNLTITDAIRNYIEEKIGKLERYFNDVPNAV-AHVKVKTYSNSA-----TKIE 55 Query 58 VTVYANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTH-----------VQ 106 VT+ +RA+E +++LYA IDL+++K+ RQ+RKYK + +K+ +Q Sbjct 56 VTIPLKNVTLRAEERNDDLYAGIDLINNKLERQVRKYKTR-INRKSRDRGDQEVFVAELQ 114 Query 107 EKTSEVLPEDPVPDNLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLN 166 E + D DN I E++R K F++ PM +EA+ Q+ L+ HDF++F++ Sbjct 115 EMQETQVDNDAYDDNEI---------EIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVFID 165 Query 167 KDTNAINVIYIRNHGGYGVIQ 187 ++T+ +++Y R G YG+IQ Sbjct 166 RETDGTSIVYRRKDGKYGLIQ 186 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus epidermidis RP62A] Sequence ID: Q5HQX7.1 Length: 189 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus epidermidis ATCC 12228] Sequence ID: Q8CTF2.1 Length: 189 Range 1: 2 to 186 Score:108 bits(270), Expect:1e-28, Method:Compositional matrix adjust., Identities:59/190(31%), Positives:109/190(57%), Gaps:8/190(4%) Query 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNARITDKHKAEVTV 60 ++ I G+N+ +T++I +Y+E K+ K ++F V H+ V + T K EVT+ Sbjct 2 IRFEIHGDNLTITDAIRNYIEEKVGKLERYFNNVPNAV-AHVRVKTYSNSTTK--IEVTI 58 Query 61 YANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHVQEKTSEVLP---EDP 117 +RA+E ++LYA IDL+++K+ RQ+RKYK + + H ++ ++ Sbjct 59 PLKDVTLRAEERHDDLYAGIDLITNKLERQVRKYKTR--VNRKHRDRGDQDIFVAEVQES 116 Query 118 VPDNLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNKDTNAINVIYI 177 +N D E E++R K F++ PM +EA+ Q+ L+ HDF++F +++T+ +++Y Sbjct 117 TTNNHADDIESENDIEIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIFTDRETDGTSIVYR 176 Query 178 RNHGGYGVIQ 187 R G YG+I+ Sbjct 177 RKDGKYGLIE 186 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF; AltName: Full=Ribosome hibernation-promoting factor [Staphylococcus aureus subsp. aureus USA300] Sequence ID: Q2FIN9.1 Length: 190 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF; AltName: Full=Hibernation promoting factor SaHPF [Staphylococcus aureus subsp. aureus NCTC 8325] Sequence ID: Q2G055.1 Length: 190 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus aureus RF122] Sequence ID: Q2YSH7.1 Length: 190 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus aureus subsp. aureus MSSA476] Sequence ID: Q6GB78.1 Length: 190 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus aureus subsp. aureus MRSA252] Sequence ID: Q6GIN9.1 Length: 190 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus aureus subsp. aureus MW2] Sequence ID: Q7A1G5.1 Length: 190 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus aureus subsp. aureus N315] Sequence ID: Q7A6R6.1 Length: 190 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus aureus subsp. aureus Mu50] Sequence ID: Q99VM3.1 Length: 190 Range 1: 2 to 186 Score:108 bits(269), Expect:1e-28, Method:Compositional matrix adjust., Identities:64/201(32%), Positives:113/201(56%), Gaps:30/201(14%) Query 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSV---ANNARITDKHKAE 57 ++ I G+N+ +T++I +Y+E K+ K ++F V H+ V +N+A K E Sbjct 2 IRFEIHGDNLTITDAIRNYIEEKIGKLERYFNDVPNAV-AHVKVKTYSNSA-----TKIE 55 Query 58 VTVYANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTH-----------VQ 106 VT+ +RA+E +++LYA IDL+++K+ RQ+RKYK + +K+ +Q Sbjct 56 VTIPLKNVTLRAEERNDDLYAGIDLINNKLERQVRKYKTR-INRKSRDRGDQEVFVAELQ 114 Query 107 EKTSEVLPEDPVPDNLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLN 166 E + D DN I E++R K F++ PM +EA+ Q+ L+ HDF++F + Sbjct 115 EMQETQVDNDAYDDNEI---------EIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVFTD 165 Query 167 KDTNAINVIYIRNHGGYGVIQ 187 ++T+ +++Y R G YG+IQ Sbjct 166 RETDGTSIVYRRKDGKYGLIQ 186 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF; AltName: Full=Hst23; AltName: Full=Putative sigma-54 modulation protein; AltName: Full=SigL modulation protein [Bacillus subtilis subsp. subtilis str. 168] Sequence ID: P28368.2 Length: 189 Range 1: 1 to 187 Score:106 bits(264), Expect:7e-28, Method:Compositional matrix adjust., Identities:66/192(34%), Positives:108/192(56%), Gaps:9/192(4%) Query 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHF-QTFATKVDVHLSVANNARITDKHKAEVT 59 M I+G NI VT ++ D+VE K+ K ++F + V+V+L N+ + K EVT Sbjct 1 MNYNIRGENIEVTPALKDHVERKIGKLERYFDHSVDADVNVNLKFYNDK----ESKVEVT 56 Query 60 VYANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHVQEKTSEVLPEDPVP 119 + +R++ +E++Y +IDL ++K+ RQ+RK+K K +K Q +L Sbjct 57 IPMTDLALRSEVHNEDMYNAIDLATNKLERQIRKHKTK-VNRKFREQGSPKYLLANGLGS 115 Query 120 DNLIG---DRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNKDTNAINVIY 176 D I D E ++VR K F + PM +EA+ Q+ ++ H+F++F N +TN NV+Y Sbjct 116 DTDIAVQDDIEEEESLDIVRQKRFNLKPMDSEEAILQMNMLGHNFFVFTNAETNLTNVVY 175 Query 177 IRNHGGYGVIQP 188 RN G YG+I+P Sbjct 176 RRNDGKYGLIEP 187 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292] Sequence ID: Q49VV1.1 Length: 190 Range 1: 2 to 187 Score:102 bits(255), Expect:2e-26, Method:Compositional matrix adjust., Identities:60/194(31%), Positives:111/194(57%), Gaps:15/194(7%) Query 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQ-----TFATKVDVHLSVANNARITDKHK 55 ++ I G N+ +T++I +Y+E K+ K ++F T KV + + A K Sbjct 2 IRFEIHGENLTITDAIRNYIEEKIGKLERYFNDVPNATAHVKVKTYQNSAT--------K 53 Query 56 AEVTVYANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHVQEKTS-EVLP 114 EVT+ +RA+E +++LYA IDL+++K+ RQ+RKYK + + + E+ + LP Sbjct 54 IEVTIPLKKVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRVNRRNRNRGEQEAFASLP 113 Query 115 EDPVPDNLIGDR-APELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNKDTNAIN 173 E+ + D + E++R K F++ PM +EA+ Q+ L+ HDF++F +++T+ + Sbjct 114 EEKEAVEIQNDENEADNEIEIIRAKNFSLKPMDSEEAVLQMDLLGHDFFIFTDRETDGTS 173 Query 174 VIYIRNHGGYGVIQ 187 ++Y R G YG+I+ Sbjct 174 IVYKRKDGKYGLIE 187 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539] Sequence ID: Q9RVE7.1 Length: 191 Range 1: 6 to 188 Score:95.9 bits(237), Expect:1e-23, Method:Compositional matrix adjust., Identities:64/188(34%), Positives:100/188(53%), Gaps:11/188(5%) Query 5 IQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNARITDKHKAEVTVYANG 64 + G N+ VTE + +YVE KL + ++ T V L+V + +++ EV + G Sbjct 6 LSGRNVEVTEPMREYVEEKLSRLDRYTDQI-TDARVTLTVRDVRNNERRNRVEVQLNVPG 64 Query 65 TVIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHVQEKTSEVLP---EDPVPDN 121 +IRA+E ++YA+ID SD + RQLRK+K + ++ QE E LP E V Sbjct 65 GIIRAEEHHADMYAAIDKASDVLERQLRKFKTRYMKQR---QEGRPEPLPGPAEAEVNAQ 121 Query 122 LIG---DRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNKDTNAINVIYIR 178 G D E E+VR K F + PM+ ++A+ Q++ + HDFY+F + V+Y R Sbjct 122 GSGAAMDDVSEFHPEIVRQKRFELRPMSAEDAVVQMEALGHDFYVFQDL-QGQTGVVYRR 180 Query 179 NHGGYGVI 186 G YG+I Sbjct 181 RDGHYGLI 188 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Mycobacterium tuberculosis H37Rv] Sequence ID: O05886.4 Length: 219 Range 1: 20 to 217 Score:92.4 bits(228), Expect:4e-22, Method:Compositional matrix adjust., Identities:59/202(29%), Positives:101/202(50%), Gaps:20/202(9%) Query 2 KLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNARITDK-HKAEVTV 60 +++ +G N+ + + YV KL + + +T DV L N R + E+T Sbjct 20 EIVFKGRNVEIPDHFRIYVSQKLARLERFDRTIYL-FDVELDHERNRRQRKSCQRVEITA 78 Query 61 YANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHVQEKTSEVLPED---- 116 G V+R + +++ YA+++ K+ +LR+ K++ +K H +KT L E Sbjct 79 RGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDR---RKVHYGDKTPVSLAEATAVV 135 Query 117 PVPDNLIGDRAPEL-----------PSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFL 165 P P+N R E P +VR K PM++D+AL Q++LV HDF++F Sbjct 136 PAPENGFNTRPAEAHDHDGAVVEREPGRIVRTKEHPAKPMSVDDALYQMELVGHDFFLFY 195 Query 166 NKDTNAINVIYIRNHGGYGVIQ 187 +KDT +V+Y R+ YG+I+ Sbjct 196 DKDTERPSVVYRRHAYDYGLIR 217 >RecName: Full=Ribosome hibernation promoting factor; Short=HPF; AltName: Full=Hibernation factor HPF [Azotobacter vinelandii] Sequence ID: P17160.1 Length: 107 Range 1: 1 to 96 Score:65.9 bits(159), Expect:3e-13, Method:Compositional matrix adjust., Identities:37/102(36%), Positives:62/102(60%), Gaps:6/102(5%) Query 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNARITDKHKAEVTV 60 M++ I G+ + VT+++ DYVE K+ + +HF T V V ++V K K E T+ Sbjct 1 MQVNISGHQLDVTDALRDYVEEKISRLERHFDRI-TSVQVIMTVEKL-----KQKIEATL 54 Query 61 YANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKK 102 + +G + A E++YA+IDL++DK+ RQL K+KEK ++ Sbjct 55 HVSGAEVVANAEHEDMYAAIDLLADKLDRQLIKHKEKQIERQ 96 >RecName: Full=Ribosome hibernation promoting factor; Short=HPF; AltName: Full=Hibernation factor HPF [Cupriavidus necator H16] Sequence ID: P28613.2 Length: 116 Range 1: 1 to 99 Score:61.2 bits(147), Expect:2e-11, Method:Compositional matrix adjust., Identities:35/100(35%), Positives:58/100(58%), Gaps:1/100(1%) Query 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNARITDKHKAEVTV 60 M I G+++ +T + +YVE+KLE+ +HF V V LSV N+ + AE+ + Sbjct 1 MNFKISGHHLDITPPLREYVETKLERIVRHFDQ-VIGVSVLLSVDNHKEKDRRQYAEINL 59 Query 61 YANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFG 100 + G I + E+LYA+ID + DK+ RQ+ +YK++ G Sbjct 60 HLKGKDIFVEAHHEDLYAAIDALVDKLDRQVIRYKDRVQG 99 >RecName: Full=Ribosome hibernation promoting factor; Short=HPF; AltName: Full=Hibernation factor HPF [Escherichia coli K-12] Sequence ID: P0AFX0.1 Length: 95 >RecName: Full=Ribosome hibernation promoting factor; Short=HPF; AltName: Full=Hibernation factor HPF [Escherichia coli CFT073] Sequence ID: P0AFX1.1 Length: 95 >RecName: Full=Ribosome hibernation promoting factor; Short=HPF; AltName: Full=Hibernation factor HPF [Escherichia coli O157:H7] Sequence ID: P0AFX2.1 Length: 95 >RecName: Full=Ribosome hibernation promoting factor; Short=HPF; AltName: Full=Hibernation factor HPF [Shigella flexneri] Sequence ID: P0AFX3.1 Length: 95 Range 1: 1 to 91 Score:59.7 bits(143), Expect:6e-11, Method:Compositional matrix adjust., Identities:36/97(37%), Positives:61/97(62%), Gaps:6/97(6%) Query 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNARITDKHKAEVTV 60 M+L I GNN+ +TE++ ++V +K K ++F +V V L V ++T H ++ T+ Sbjct 1 MQLNITGNNVEITEALREFVTAKFAKLEQYFDRI-NQVYVVLKVE---KVT--HTSDATL 54 Query 61 YANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEK 97 + NG I A +++YA+ID + DK+ARQL K+K+K Sbjct 55 HVNGGEIHASAEGQDMYAAIDGLIDKLARQLTKHKDK 91 >RecName: Full=Ribosome hibernation promoting factor; Short=HPF; AltName: Full=Hibernation factor HPF [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] Sequence ID: P26983.1 Length: 95 Range 1: 1 to 91 Score:57.8 bits(138), Expect:3e-10, Method:Compositional matrix adjust., Identities:34/97(35%), Positives:59/97(60%), Gaps:6/97(6%) Query 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNARITDKHKAEVTV 60 M+L I G+N+ +TE++ ++V +K K ++F+ +V V L V I+D T+ Sbjct 1 MQLNITGHNVEITEALREFVTTKFAKLEQYFERI-NQVYVVLKVEKVTHISD-----ATL 54 Query 61 YANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEK 97 + NG I A +++YA+ID + DK+ARQL ++K+K Sbjct 55 HVNGGEIHASAEGQDMYAAIDGLIDKLARQLTRHKDK 91 >RecName: Full=Ribosome hibernation promoting factor; Short=HPF; AltName: Full=Hibernation factor HPF [Pseudomonas putida KT2440] Sequence ID: P0A147.1 Length: 102 >RecName: Full=Ribosome hibernation promoting factor; Short=HPF; AltName: Full=Hibernation factor HPF [Pseudomonas putida] Sequence ID: P0A148.1 Length: 102 Range 1: 1 to 92 Score:55.5 bits(132), Expect:2e-09, Method:Compositional matrix adjust., Identities:35/98(36%), Positives:54/98(55%), Gaps:6/98(6%) Query 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNARITDKHKAEVTV 60 M++ I G ++ VT+ + DYV KL + HF T V V + V + K E T+ Sbjct 1 MQVNISGQHVEVTQPLRDYVLEKLARVESHFDKI-TNVQVIMKVEKL-----QQKVEATL 54 Query 61 YANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKN 98 G + A E++YA+ID ++DK+ RQL+K+KEK Sbjct 55 QIPGGEVVANAEHEDMYAAIDALADKLDRQLKKHKEKQ 92 >RecName: Full=Ribosome hibernation promoting factor; Short=HPF; AltName: Full=Hibernation factor HPF [Klebsiella oxytoca] Sequence ID: P17161.1 Length: 95 Range 1: 1 to 91 Score:53.5 bits(127), Expect:1e-08, Method:Compositional matrix adjust., Identities:33/97(34%), Positives:55/97(56%), Gaps:6/97(6%) Query 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNARITDKHKAEVTV 60 M+L I G+N+ +T ++ D+V +K K + F +V + L V +I D + Sbjct 1 MQLNITGHNVEITPAMRDFVTAKFSKLEQFFDRI-NQVYIVLKVEKVTQIAD-----ANL 54 Query 61 YANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEK 97 + NG I A +++YA+ID + DK+ARQL K+K+K Sbjct 55 HVNGGEIHASAEGQDMYAAIDGLIDKLARQLTKHKDK 91 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Sinorhizobium meliloti 1021] Sequence ID: P17265.2 Length: 190 Range 1: 1 to 183 Score:54.3 bits(129), Expect:4e-08, Method:Compositional matrix adjust., Identities:48/197(24%), Positives:94/197(47%), Gaps:25/197(12%) Query 1 MKLLIQGNNIAVTESIHDYVESKLEKA-TKHFQT-FATKVDVHLSVANNARITDKHKAEV 58 M + + G ++ + +S + ++E+A TK+F ++++V V S +R + K + Sbjct 1 MSVRVSGKHMEIGDSFRVRIGEQIEQAVTKYFDGGYSSQVTVEKS---GSRFSADCKLHL 57 Query 59 TVYANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEK-------NFGKKTHVQEKTSE 111 G V++A + ++ D S++I ++LR+YK K N T V + + Sbjct 58 DT---GVVLQANGQANEPQSAFDAASERIEKRLRRYKRKLKDHHNGNGQNSTEVAYRVMD 114 Query 112 VLP--EDPVPDNLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNKDT 169 +P ++ VPD D AP + +E + + M++ A+ L + D MF + Sbjct 115 SVPFEDEEVPD----DYAPTIVAETTKQ----LRTMSVANAVMALDMTDEPVLMFRSPGK 166 Query 170 NAINVIYIRNHGGYGVI 186 + +N++Y RN G G I Sbjct 167 DDLNIVYRRNDGNIGWI 183 >RecName: Full=Ribosome hibernation promoting factor; Short=HPF; AltName: Full=Hibernation factor HPF [Acinetobacter guillouiae] Sequence ID: P33987.1 Length: 113 Range 1: 1 to 100 Score:42.4 bits(98), Expect:2e-04, Method:Compositional matrix adjust., Identities:26/100(26%), Positives:57/100(57%), Gaps:4/100(4%) Query 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHF-QTFATKVDV---HLSVANNARITDKHKA 56 M++ I+G+++++T +I + + + + TKH Q + +V + H + + + H A Sbjct 1 MQITIRGHHLSITPAIEENIRDRFTQMTKHIDQVNSMQVKLSKDHQLDKRSKKGSANHIA 60 Query 57 EVTVYANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKE 96 E V G + AQ ++++Y +I ++DK+ RQL K+++ Sbjct 61 EAIVRLPGIELFAQASADDMYNAITKLTDKLKRQLDKHRK 100 >RecName: Full=Ribosome hibernation promotion factor; Short=HPF [Bradyrhizobium diazoefficiens USDA 110] Sequence ID: P30334.1 Length: 203 Range 1: 1 to 192 Score:40.0 bits(92), Expect:0.004, Method:Compositional matrix adjust., Identities:39/201(19%), Positives:88/201(43%), Gaps:22/201(10%) Query 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNARITDKHKAEVTV 60 M L I G +++V E++ V + E+ + + F H++++ + + + + Sbjct 1 MTLRISGKSVSVGEALRGRVSDRTEEVLRKY--FDGNYSGHITLSKDGF---GFRTDCAL 55 Query 61 YAN-GTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTH----------VQEKT 109 + + G + A + + YAS D I ++L++YK + + + T Sbjct 56 HLDSGITLEADSNAPDAYASADQALVMIEKRLKRYKSRLKDRSARKAHVASAALAAMDAT 115 Query 110 SEVL--PEDPVPDNLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNK 167 S VL P + ++ + +P + +E ++ +++ EA+ +L L +F + Sbjct 116 SYVLEAPGEGEDEDEVTGYSPVIIAEATT----SLKQLSVSEAVMELDLSGAPCLVFQHG 171 Query 168 DTNAINVIYIRNHGGYGVIQP 188 + +N+IY R G G + P Sbjct 172 SSGRVNIIYRRADGNVGWVDP 192