## DeepTMHMM - Predictions
Predicted topologies can be downloaded in [.gff3 format](TMRs.gff3) and [.3line format](predicted_topologies.3line)
![picture](plot.png)
You can download the probabilities used to generate this plot [here](sp|Q5HD11|CIDB_STAAC_probs.csv)
### Predicted Topologies
```
>sp|Q5HD11|CIDB_STAAC | TM
MNDYVQALLMILLTVVLYYFAKRLQQKYPNPFLNPALIASLGIIFVLLIFGISYNGYMKGGSWINHILNATVVCLAYPLYKNREKIKDNVSIIFASVLTGVMLNFMLVFLTLKAFGYSKDVIVTLLPRSITAAVGIEVSHELGGTDTMTVLFIITTGLIGSILGSMLLRFGRFESSIAKGLTYGNASHAFGTAKALEMDIESGAFSSIGMILTAVISSVLIPVLILLFY
OOOMMMMMMMMMMMMMMMMMMMMMIIIIIIIMMMMMMMMMMMMMMMMMMMOOOOOOOOOOOOMMMMMMMMMMMMMMMMMIIIIIIIIIIIIMMMMMMMMMMMMMMMMMMMMMOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOMMMMMMMMMMMMMMMMMMMMMMMIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIMMMMMMMMMMMMMMMMMMMMMMMOOOO

```


```
##gff-version 3
# sp|Q5HD11|CIDB_STAAC Length: 229
# sp|Q5HD11|CIDB_STAAC Number of predicted TMRs: 6
sp|Q5HD11|CIDB_STAAC	outside	1	3				
sp|Q5HD11|CIDB_STAAC	TMhelix	4	24				
sp|Q5HD11|CIDB_STAAC	inside	25	31				
sp|Q5HD11|CIDB_STAAC	TMhelix	32	50				
sp|Q5HD11|CIDB_STAAC	outside	51	62				
sp|Q5HD11|CIDB_STAAC	TMhelix	63	79				
sp|Q5HD11|CIDB_STAAC	inside	80	91				
sp|Q5HD11|CIDB_STAAC	TMhelix	92	112				
sp|Q5HD11|CIDB_STAAC	outside	113	145				
sp|Q5HD11|CIDB_STAAC	TMhelix	146	168				
sp|Q5HD11|CIDB_STAAC	inside	169	202				
sp|Q5HD11|CIDB_STAAC	TMhelix	203	225				
sp|Q5HD11|CIDB_STAAC	outside	226	229				

```