TBLASTN 2.9.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: X5.fasta 1,868 sequences; 23,962,143 total letters Query= sp|Q8SRP3|TF2B_ENCCU Transcription initiation factor IIB OS=Encephalitozoon cuniculi (strain GB-M1) OX=284813 GN=ECU06_1100i PE=3 SV=1 Length=312 Score E Sequences producing significant alignments: (Bits) Value scaffold-170 127 1e-32 scaffold-693 126 3e-32 scaffold-57 49.7 1e-06 scaffold-22 48.9 2e-06 >scaffold-170 Length=449377 Score = 127 bits (319), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 103/343 (30%), Positives = 158/343 (46%), Gaps = 47/343 (14%) Frame = -3 Query 10 FVQTCSDCGETQ-NIVEDYKNGYHVCGRCGCIVGNRIIDEGSEWRSFGDSNKVD---PCR 65 F C +C + NIVEDY+ G VCG CG + RIID SEWRSF D N P R Sbjct 15242 FRLICKNCKKNPPNIVEDYRAGDLVCGDCGLVYPGRIIDMHSEWRSFNDDNGNGGDDPSR 15063 Query 66 IGSASNPYLES--EQLDTMISTGGGMNSYVLSKIQMKNSMRGPERALKHGMN---LITAF 120 IG A NP +E + L T I+ N+ S +M + G + K M+ +I+ Sbjct 15062 IGQAENPLMEGVIDHLSTSINRSVVRNAMTSSLSRMHGKVSGTVKGDKDMMDSFKVISNL 14883 Query 121 CERSNLSRTIIDRAHYIFKNIEERKLLKGKNVEGIVAACIYIACRQEECPRTFKEISVMT 180 CER++L + + DR+ ++K I + L K KN + ++A C++IACR E RTF EIS +T Sbjct 14882 CERASLPKVVADRSK*LYKKIWDADL*KKKNNQHLIAGCLFIACR*EAVGRTFAEISKVT 14703 Query 181 AVQKREIGRCFKLISPHLER---------------------------MATMSTENIIARF 213 V+ + + L+ L++ +A S E ++ R Sbjct 14702 QVEIGYLKKAVNLLLNFLKQ*HAASATSSSSQ*SAPGAMQSSES*AHVAGASAELLVPRL 14523 Query 214 CSDLNLNIKIQKIATEIAKAAHELGCLAGKSPDSIAAAVIYMVTNL---FPEEKKIQ--K 268 C+ L L+ + K L G++P++IA + + ++ L PE K + Sbjct 14522 CA*LGLDAQFS*AV*MTVKNIE**QLLTGRNPNTIAGSTVLLLVKLSATLPEYDKEEL*T 14343 Query 269 DIQFVTNVTEVTIKNTYKELLTFKYDIIPENMVNKESIDKLPG 311 + + ++E TI+ K L IIP +S LPG Sbjct 14342 KLPKIVQLSEYTIRKALKILEPAASSIIP------KSFKVLPG 14232 >scaffold-693 Length=1268102 Score = 126 bits (316), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 102/343 (30%), Positives = 157/343 (46%), Gaps = 47/343 (14%) Frame = -2 Query 10 FVQTCSDCGETQ-NIVEDYKNGYHVCGRCGCIVGNRIIDEGSEWRSFGDSNKVD---PCR 65 F C +C + NIVEDY+ G VCG CG + RIID SEWRSF D N P R Sbjct 595270 FRLICKNCKKNPPNIVEDYRAGDLVCGDCGLVYPGRIIDMHSEWRSFNDDNGNGGDDPSR 595091 Query 66 IGSASNPYLES--EQLDTMISTGGGMNSYVLSKIQMKNSMRGPERALKHGMN---LITAF 120 IG NP +E + L T I+ N+ S +M + G + K M+ +I+ Sbjct 595090 IGQVENPLMEGVIDHLSTSINRSVVRNAMTSSLSRMHGKVSGTVKGDKDMMDSFKVISNL 594911 Query 121 CERSNLSRTIIDRAHYIFKNIEERKLLKGKNVEGIVAACIYIACRQEECPRTFKEISVMT 180 CER++L + + DR+ ++K I + L K KN + ++A C++IACR E RTF EIS +T Sbjct 594910 CERASLPKVVADRSK*LYKKIWDADL*KKKNNQHLIAGCLFIACR*EAVGRTFAEISKVT 594731 Query 181 AVQKREIGRCFKLISPHLER---------------------------MATMSTENIIARF 213 V+ + + L+ L++ +A S E ++ R Sbjct 594730 QVEIGYLKKAVNLLLNFLKQ*HAASATSSSSQ*SAAGVVQSTESQAHVAGASAELLVPRL 594551 Query 214 CSDLNLNIKIQKIATEIAKAAHELGCLAGKSPDSIAAAVIYMVTNL---FPEEKKIQ--K 268 C+ L L+ + K L G++P++IA + + ++ L PE K + Sbjct 594550 CA*LGLDAQFS*AV*MTVKNIE**QLLTGRNPNTIAGSTVLLLVKLSATLPENDKEEL*T 594371 Query 269 DIQFVTNVTEVTIKNTYKELLTFKYDIIPENMVNKESIDKLPG 311 + + ++E TI+ K L IIP +S LPG Sbjct 594370 KLPKIVQLSEYTIRKALKILEPAASSIIP------KSFKVLPG 594260 >scaffold-57 Length=110052 Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 5/163 (3%) Frame = +3 Query 131 IDRAHYIFKNIEERKLLKGKNVEGIVAACIYIACRQEECPRTFKEISVMTAVQKREIGRC 190 IDRA +K ++ +G+ ++AAC+YI CR E+ + S + V +G Sbjct 26622 IDRATQCYKMALMKEFTQGRKGSHVIAACLYIVCR*EKTVHMLIDFSDVLHVNVYSLGNT 26801 Query 191 F-KLISPHLERMATMSTENIIARFCSDLNLNIKIQKIATEIAKAAHEL---GCLAGKSPD 246 F KLI ++ + ++RF + L L K ++ T+ + + G+ P+ Sbjct 26802 FLKLIRVLDLKLPLIDPSLYLSRFAAQLELGEKTHQVTTDALRLV*RMKRDWIHLGRRPN 26981 Query 247 SIAAAVIYMVTNLFPEEKKIQKDIQFVTNVTEVTIKNTYKELL 289 I A + + + K+ Q DI V + ++T+++ E + Sbjct 26982 GICGASLLIACRMHG-FKRTQYDIIRVVKIGDMTLRSRLNEFM 27107 >scaffold-22 Length=180604 Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/163 (23%), Positives = 74/163 (45%), Gaps = 5/163 (3%) Frame = +1 Query 131 IDRAHYIFKNIEERKLLKGKNVEGIVAACIYIACRQEECPRTFKEISVMTAVQKREIGRC 190 IDRA +K ++ +G+ ++AAC+YI CR E+ + S + + +G Sbjct 131218 IDRATQCYKMALMKEFTQGRKGSHVIAACLYIVCR*EKTVHMLIDFSDVLHINVYSLGNT 131397 Query 191 F-KLISPHLERMATMSTENIIARFCSDLNLNIKIQKIATEIAKAAHEL---GCLAGKSPD 246 F KLI ++ + ++RF + L L K ++ T+ + + G+ P+ Sbjct 131398 FLKLIRVLDLKLPLIDPSLYLSRFAAQLELGEKTHQVTTDALRLV*RMKRDWIHLGRRPN 131577 Query 247 SIAAAVIYMVTNLFPEEKKIQKDIQFVTNVTEVTIKNTYKELL 289 I A + + + K+ Q DI V + ++T+++ E + Sbjct 131578 GICGASLLIACRMHG-FKRTQYDIIRVVKIGDMTLRSRLNEFM 131703 Lambda K H a alpha 0.320 0.135 0.398 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 1670123838 Database: X5.fasta Posted date: Nov 10, 2021 1:45 PM Number of letters in database: 23,962,143 Number of sequences in database: 1,868 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40