Operon IdGene Type COGgene PosLeft postRight Strand Function 1 dnaN CDS COG0592 1050 2150 + [L] DNA polymerase sliding clamp subunit (PCNA recF CDS COG1195 2338 3423 + [L] Recombinational DNA repair ATPase (RecF pathway) gyrB CDS COG0187 3441 5849 + [L] Type IIA topoisomerase (DNA gyrase/topo II, 2 cds-WP_187298278.1 CDS NA 5952 6101 - NA 3 cds-CPI84_RS00025 CDS COG3677 6302 6743 - [L] Transposase and inactivated derivatives 4 yidA CDS COG0561 6957 7766 + [R] Predicted hydrolases of the HAD superfamily 5 cds-WP_104944972.1 CDS COG1506 7843 9111 + [E] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 6 cds-WP_014539955.1 CDS COG5645 9092 9454 - [R] Predicted periplasmic lipoprotein 7 ibpA CDS COG0071 9763 10182 + [O] Molecular chaperone (small heat shock protein) 8 cds-WP_104944973.1 CDS NA 10234 10536 - NA cds-WP_104945179.1 CDS NA 10537 11169 - NA 9 cds-WP_014539953.1 CDS COG3977 11477 12727 - [E] Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase 10 cds-WP_014539950.1 CDS ROG0955 13051 14259 + NA 11 cds-WP_015899196.1 CDS NA 14430 14855 + NA 12 ghrB CDS COG1052 15080 16045 - [CHR] Lactate dehydrogenase and related dehydrogenases cds-WP_014539948.1 CDS COG0477 16098 17384 - [GEPR] Permeases of the major facilitator superfamily cds-WP_104944974.1 CDS COG0524 17461 18414 - [G] Sugar kinases, ribokinase family cds-WP_014539946.1 CDS ROG2316 18418 19167 - NA 13 cds-WP_014539945.1 CDS COG2453 19763 21457 + [T] Predicted protein-tyrosine phosphatase 14 cds-WP_014539944.1 CDS COG1609 21620 22654 - [K] Transcriptional regulators 15 tag CDS COG2818 22937 23500 - [L] 3-methyladenine DNA glycosylase cds-WP_014542807.1 CDS ROG5032 23520 24131 - NA fdhE CDS COG3058 24052 25044 - [O] Uncharacterized protein involved in formate dehydrogenase 16 fdhD CDS COG1526 25493 26284 + [C] Uncharacterized protein required for formate dehydrogenase 17 cds-WP_014539937.1 CDS COG1349 26236 27030 - [KG] Transcriptional regulators of sugar metabolism 18 cds-WP_015899191.1 CDS COG0160 27211 28551 + [E] 4-aminobutyrate aminotransferase and related aminotransferases sodA CDS COG0605 28753 29370 + [P] Superoxide dismutase 19 cds-WP_015899190.1 CDS COG1129 29683 31188 + [G] ABC-type sugar transport system, ATPase component cds-WP_014539932.1 CDS COG1172 31185 32192 + [G] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components cds-WP_014539931.1 CDS COG1879 32214 33272 + [G] ABC-type sugar transport system, periplasmic component 20 cds-WP_014539929.1 CDS COG3710 33815 34255 - [K] DNA-binding winged-HTH domains 21 cds-WP_014542797.1 CDS ROG6188 34588 34857 + NA 22 cds-WP_014539927.1 CDS COG2197 34953 35576 - [TK] Response regulator containing a CheY-like receiver 23 cds-WP_014539926.1 CDS ROG2195 36136 36498 - NA 24 cds-WP_014539924.1 CDS COG3722 36572 37117 - [K] Transcriptional regulator cds-WP_014539923.1 CDS COG0246 37193 38341 - [G] Mannitol-1-phosphate/altronate dehydrogenases cds-WP_014539922.1 CDS COG2213 38440 40371 - [G] Phosphotransferase system, mannitol-specific IIBC component 25 cds-WP_015899189.1 CDS NA 41444 41701 + NA 26 cds-WP_014539918.1 CDS COG3483 42272 42988 - [E] Tryptophan 2,3-dioxygenase (vermilion) 27 cds-WP_015899188.1 CDS COG2944 43321 43614 + [K] Predicted transcriptional regulator 28 cds-WP_015899187.1 CDS COG1064 43657 44052 - [R] Zn-dependent alcohol dehydrogenases 29 glyS CDS COG0751 44141 46210 - [J] Glycyl-tRNA synthetase, beta subunit glyQ CDS COG0752 46220 47131 - [J] Glycyl-tRNA synthetase, alpha subunit 30 cds-WP_014539912.1 CDS COG3274 47389 48384 + [S] Uncharacterized protein conserved in bacteria 31 cds-WP_014539911.1 CDS COG4095 48369 48821 - [S] Uncharacterized conserved protein cds-WP_014539910.1 CDS COG0246 48818 50221 - [G] Mannitol-1-phosphate/altronate dehydrogenases 32 cds-WP_014539909.1 CDS NA 50335 50562 - NA cds-CPI84_RS00245 CDS NA 50578 51109 - NA 33 cds-WP_014539905.1 CDS COG3392 51385 53238 + [L] Adenine-specific DNA methylase cds-WP_014539904.1 CDS COG3440 53228 54403 + [V] Predicted restriction endonuclease 34 cds-WP_015899184.1 CDS COG3328 54646 55854 + [L] Transposase and inactivated derivatives 35 cds-WP_014539902.1 CDS COG2161 56115 56366 - [D] Antitoxin of toxin-antitoxin stability system 36 cds-WP_014539901.1 CDS COG0388 56459 57319 - [R] Predicted amidohydrolase 37 cds-WP_014539900.1 CDS NA 57770 58018 + NA 38 cds-WP_015899183.1 CDS COG0317 58202 58783 - [TK] Guanosine polyphosphate pyrophosphohydrolases/synthetases 39 cds-WP_014539898.1 CDS COG1846 58847 59305 + [K] Transcriptional regulators 40 cds-WP_014539897.1 CDS COG1764 59393 59821 + [O] Predicted redox protein, regulator of disulfide 41 eptB CDS COG2194 60132 61799 + [R] Predicted membrane-associated, metal-dependent hydrolase 42 cds-WP_014542777.1 CDS COG0747 63225 64835 + [E] ABC-type dipeptide transport system, periplasmic component dppB CDS COG0601 65040 66059 + [EP] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components dppC CDS COG1173 66069 66971 + [EP] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components dppD CDS COG0444 66980 67966 + [EP] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component cds-WP_015899182.1 CDS COG4608 67956 68957 + [E] ABC-type oligopeptide transport system, ATPase component 43 bcsO CDS NA 69571 70221 + NA yhjQ CDS COG2894 70212 71009 + [D] Septum formation inhibitor-activating ATPase 44 bcsA CDS COG1215 71097 73196 + [M] Glycosyltransferases, probably involved in cell wall bcsB CDS ROG0761 73193 75643 + NA cds-WP_014539881.1 CDS COG3063 75640 79707 + [NU] Tfp pilus assembly protein PilF cds-WP_014539880.1 CDS NA 79710 80177 + NA cds-WP_041474072.1 CDS COG3405 80213 81187 + [G] Endoglucanase Y 45 bcsE CDS NA 81174 82640 - NA 46 hmsP CDS COG2200 82974 84968 + [T] FOG: EAL domain 47 cds-WP_015899177.1 CDS COG1301 85159 86433 + [C] Na+/H+-dicarboxylate symporters 48 cds-WP_014539875.1 CDS COG0612 86729 88201 + [R] Predicted Zn-dependent peptidases 49 pdeH CDS COG2200 88677 89450 + [T] FOG: EAL domain 50 cds-WP_014539872.1 CDS COG2982 89515 91569 + [M] Uncharacterized protein involved in outer membrane 51 cds-WP_014539871.1 CDS COG0477 91651 92955 - [GEPR] Permeases of the major facilitator superfamily 52 cds-WP_014539870.1 CDS COG1285 93661 93879 + [S] Uncharacterized membrane protein cds-WP_014539869.1 CDS COG0474 93911 94306 + [P] Cation transport ATPase 53 cds-WP_014539868.1 CDS NA 94472 94720 - NA 54 cds-WP_014539867.1 CDS COG0624 94952 96265 + [E] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 55 mntP CDS COG1971 96785 97357 + [S] Predicted membrane protein 56 cds-CPI84_RS00430 CDS NA 97551 97747 - NA 57 cds-CPI84_RS00435 CDS NA 97866 98120 + NA cds-CPI84_RS00440 CDS ROG3090 98137 98472 + NA 58 cds-WP_014539860.1 CDS NA 98503 98736 - NA 59 cds-WP_014539859.1 CDS COG1957 98926 99846 - [F] Inosine-uridine nucleoside N-ribohydrolase cds-WP_014539858.1 CDS ROG1588 99895 100290 - NA 60 cds-WP_104944975.1 CDS COG3328 100617 101825 - [L] Transposase and inactivated derivatives 61 kdpF CDS NA 102045 102134 + NA 62 cds-WP_015899169.1 CDS NA 102411 103103 - NA 63 cds-WP_104944976.1 CDS ROG2586 103410 103616 + NA 64 kdpF_2 CDS NA 104328 104417 + NA kdpA CDS COG2060 104417 106102 + [P] K+-transporting ATPase, A chain kdpB CDS COG2216 106121 108169 + [P] High-affinity K+ transport system, ATPase chain kdpC CDS COG2156 108181 108753 + [P] K+-transporting ATPase, c chain kdpD CDS COG2205 108763 111462 + [T] Osmosensitive K+ channel histidine kinase 65 cds-WP_104945181.1 CDS NA 111767 112141 - NA 66 cds-WP_104944977.1 CDS COG2963 113038 113296 + [L] Transposase and inactivated derivatives cds-WP_104944977.1_2 CDS COG4413 113296 114188 + [E] Urea transporter 67 cds-WP_014539845.1 CDS ROG1594 114357 114935 + NA cds-WP_014539844.1 CDS COG3386 114948 115964 + [G] Gluconolactonase 68 cds-WP_014539843.1 CDS COG3440 116237 117412 - [V] Predicted restriction endonuclease cds-WP_014539842.1 CDS NA 117440 117751 - NA 69 cds-CPI84_RS00545 CDS COG1132 117998 119842 + [V] ABC-type multidrug transport system, ATPase and 70 cds-WP_015899165.1 CDS COG3146 119860 120987 - [S] Uncharacterized protein conserved in bacteria 71 cds-WP_014539837.1 CDS COG2375 121173 122075 + [P] Siderophore-interacting protein cds-WP_014539836.1 CDS NA 122114 122890 + NA cds-WP_104944978.1 CDS COG0666 122887 123627 + [R] FOG: Ankyrin repeat 72 cds-WP_014539834.1 CDS COG2274 124064 126163 - [V] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal cds-WP_014539833.1 CDS ROG0722 126156 127430 - NA 73 cds-WP_014542734.1 CDS COG2862 128710 129207 + [S] Predicted membrane protein 74 cds-CPI84_RS00590 CDS COG4221 129259 129366 + [R] Short-chain alcohol dehydrogenase of unknown specificity 75 cds-WP_014539829.1 CDS NA 129567 130463 + NA 76 cds-WP_014539828.1 CDS COG0583 130495 131409 - [K] Transcriptional regulator 77 hpxD CDS COG4638 131531 132565 + [PR] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, cds-WP_015899161.1 CDS COG1018 132574 133536 + [C] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 78 cds-CPI84_RS00615 CDS COG2831 133803 135469 + [U] Hemolysin activation/secretion protein cds-WP_014539823.1 CDS COG3210 135479 137545 + [U] Large exoproteins involved in heme utilization 79 cds-WP_014539822.1 CDS COG2336 137803 137994 - [T] Growth regulator 80 cds-WP_015899158.1 CDS COG4974 138017 138724 + [L] Site-specific recombinase XerD cds-WP_014539820.1 CDS COG3077 138696 138980 + [L] DNA-damage-inducible protein J cds-WP_015899156.1 CDS COG3668 138977 139282 + [R] Plasmid stabilization system protein 81 cds-CPI84_RS00650 CDS NA 139897 140124 - NA 82 cybB CDS COG3038 140376 140900 + [C] Cytochrome B561 83 cds-WP_148217846.1 CDS NA 140858 141286 - NA 84 cds-WP_014539814.1 CDS COG0596 141940 142761 - [R] Predicted hydrolases or acyltransferases (alpha/beta hydrolase 85 gorA CDS COG1249 143545 144900 - [C] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) 86 cds-WP_014539812.1 CDS COG0286 145255 147636 + [V] Type I restriction-modification system methyltransferase subunit cds-WP_015899153.1 CDS COG0732 147647 148000 + [V] Restriction endonuclease S subunits 87 cds-WP_012666458.1 CDS COG3335 147997 149037 - [L] Transposase and inactivated derivatives 88 cds-WP_014539811.1 CDS COG0732 149168 150070 + [V] Restriction endonuclease S subunits cds-WP_014539810.1 CDS COG0610 150127 153177 + [V] Type I site-specific restriction-modification system, R rnz CDS COG1234 153197 154111 + [R] Metal-dependent hydrolases of the beta-lactamase superfamily 89 cds-WP_014539808.1 CDS COG2961 154216 155058 - [R] Protein involved in catabolism of external 90 cds-WP_014539807.1 CDS NA 155438 158128 + NA 91 cds-WP_015899151.1 CDS NA 158378 160240 + NA 92 cds-WP_014539804.1 CDS COG1266 160507 161328 - [R] Predicted metal-dependent membrane protease 93 prlC CDS COG0339 161523 163580 + [E] Zn-dependent oligopeptidases rsmJ CDS NA 163531 164340 + NA 94 uspA CDS COG0589 164366 164806 - [T] Universal stress protein UspA and related 95 uspB CDS NA 165107 165442 + NA 96 pitA CDS COG0306 165506 167005 - [P] Phosphate/sulphate permeases 97 cds-WP_015899146.1 CDS COG2081 167247 168431 + [R] Predicted flavoproteins 98 cds-WP_014539796.1 CDS COG0531 168435 168980 - [E] Amino acid transporters 99 cds-WP_014539793.1 CDS COG2207 169243 170076 - [K] AraC-type DNA-binding domain-containing proteins 100 cds-WP_014542702.1 CDS COG2423 170254 171393 + [E] Predicted ornithine cyclodeaminase, mu-crystallin homolog cds-WP_015899144.1 CDS COG0251 171411 171833 + [J] Putative translation initiation inhibitor, yjgF family cds-WP_014539790.1 CDS COG0665 171854 173146 + [E] Glycine/D-amino acid oxidases (deaminating) 101 cds-WP_015899143.1 CDS ROG7330 173935 174534 + NA 102 cds-WP_014539785.1 CDS COG1064 174704 175720 - [R] Zn-dependent alcohol dehydrogenases 103 proP CDS COG0477 175984 177489 - [GEPR] Permeases of the major facilitator superfamily 104 cds-WP_014539783.1 CDS COG2200 177736 179289 - [T] FOG: EAL domain 105 cds-WP_015899142.1 CDS ROG1609 179550 179744 + NA 106 cds-WP_014539780.1 CDS COG0628 180026 181063 - [R] Predicted permease 107 cds-WP_014539779.1 CDS COG1012 181741 183246 + [C] NAD-dependent aldehyde dehydrogenases iolB CDS COG3718 183295 184128 + [G] Uncharacterized enzyme involved in inositol metabolism 108 cds-WP_104944981.1 CDS COG1737 184182 185033 - [K] Transcriptional regulators 109 iolC CDS COG3892 185251 187173 - [S] Uncharacterized protein conserved in bacteria 110 iolD CDS COG3962 187659 189599 + [E] Acetolactate synthase cds-WP_104944984.1 CDS COG0673 189698 190708 + [R] Predicted dehydrogenases and related proteins cds-CPI84_RS19580 CDS NA 190717 190861 + NA iolE CDS COG1082 190906 191802 + [G] Sugar phosphate isomerases/epimerases 111 cds-WP_104944986.1 CDS ROG0653 191860 192414 - NA 112 cds-WP_104944987.1 CDS COG1738 192555 193220 - [S] Uncharacterized conserved protein 113 tusA CDS COG0425 193537 193782 + [O] Predicted redox protein, regulator of disulfide 114 cds-WP_104944989.1 CDS COG2217 193804 196059 - [P] Cation transport ATPase 115 cds-WP_104944990.1 CDS COG3714 196152 196778 - [S] Predicted membrane protein 116 cds-WP_014542679.1 CDS COG3776 196899 197168 - [S] Predicted membrane protein rsmD CDS COG0742 197158 197763 - [L] N6-adenine-specific methylase 117 ftsY CDS COG0552 197926 199374 + [U] Signal recognition particle GTPase ftsE CDS COG2884 199380 200048 + [D] Predicted ATPase involved in cell division ftsX CDS COG2177 200038 201030 + [D] Cell division protein 118 rpoH CDS COG0568 201318 202172 + [K] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 119 panM CDS NA 202435 202839 - NA 120 cds-WP_104944993.1 CDS COG0683 203333 204448 + [E] ABC-type branched-chain amino acid transport systems, livH CDS COG0559 204536 205462 + [E] Branched-chain amino acid ABC-type transport system, cds-WP_014539752.1 CDS COG4177 205459 206733 + [E] ABC-type branched-chain amino acid transport system, livG CDS COG0411 206730 207497 + [E] ABC-type branched-chain amino acid transport systems, livF CDS COG0410 207499 208212 + [E] ABC-type branched-chain amino acid transport systems, 121 cds-WP_041474065.1 CDS NA 208596 208784 + NA 122 cds-CPI84_RS00950 CDS NA 209148 209550 + NA cds-WP_071819833.1 CDS COG3839 209578 209808 + [G] ABC-type sugar transport systems, ATPase components ugpQ CDS COG0584 209808 210548 + [C] Glycerophosphoryl diester phosphodiesterase 123 cds-WP_014539746.1 CDS NA 210588 210875 - NA 124 ggt CDS NA 211029 212361 + NA 125 cds-WP_014539743.1 CDS ROG1705 212475 212705 + NA 126 cds-WP_071819202.1 CDS NA 213030 213212 - NA cds-CPI84_RS00990 CDS NA 213209 213902 - NA cds-WP_041474155.1 CDS COG3077 213907 214134 - [L] DNA-damage-inducible protein J 127 cds-CPI84_RS01000 CDS COG0405 214228 214608 + [E] Gamma-glutamyltransferase 128 cds-WP_014539740.1 CDS COG0454 214671 215078 - [KR] Histone acetyltransferase HPA2 and related acetyltransferases 129 cds-WP_014539738.1 CDS COG1741 215523 216218 + [R] Pirin-related protein 130 gntR CDS COG1609 216419 217414 + [K] Transcriptional regulators 131 gntK CDS COG3265 217651 218199 + [G] Gluconate kinase gntU CDS COG2610 218196 219536 + [GE] H+/gluconate symporter and related permeases 132 asd CDS COG0136 219722 220831 + [E] Aspartate-semialdehyde dehydrogenase 133 glgB CDS COG0296 221244 223430 + [G] 1,4-alpha-glucan branching enzyme glgX CDS COG1523 223427 225403 + [G] Type II secretory pathway, pullulanase PulA glgC CDS COG0448 225416 226702 + [G] ADP-glucose pyrophosphorylase glgA CDS COG0297 226759 228192 + [G] Glycogen synthase glgP CDS COG0058 228212 230659 + [G] Glucan phosphorylase 134 cds-WP_015899122.1 CDS NA 230840 231610 + NA 135 cds-CPI84_RS01070 CDS COG0058 231907 232321 + [G] Glucan phosphorylase 136 cds-WP_014539726.1 CDS NA 232948 233853 + NA 137 cds-CPI84_RS01085 CDS COG0058 234154 234336 + [G] Glucan phosphorylase 138 cds-WP_014539725.1 CDS NA 234565 235308 + NA 139 cds-WP_015899118.1 CDS ROG6579 235583 235831 + NA cds-CPI84_RS01100 CDS COG0058 235807 235989 + [G] Glucan phosphorylase 140 cds-WP_041474061.1 CDS NA 236218 236526 + NA cds-WP_015899117.1 CDS NA 236519 236809 + NA 141 cds-WP_014539723.1 CDS NA 236894 237778 + NA 142 cds-WP_041474060.1 CDS COG5230 237879 238328 + [S] Uncharacterized conserved protein 143 glpD CDS COG0578 238436 239941 - [C] Glycerol-3-phosphate dehydrogenase 144 glpE CDS COG0607 240180 240503 + [P] Rhodanese-related sulfurtransferase glpG CDS COG0705 240618 241430 + [R] Uncharacterized membrane protein (homolog of Drosophila cds-WP_014539718.1 CDS COG1349 241492 242250 + [KG] Transcriptional regulators of sugar metabolism 145 malP CDS COG0058 242476 244878 + [G] Glucan phosphorylase malQ CDS COG1640 244891 246960 + [G] 4-alpha-glucanotransferase 146 nfuA CDS COG0694 247135 247710 - [O] Thioredoxin-like proteins and domains gntX CDS COG1040 247769 248452 - [R] Predicted amidophosphoribosyltransferases 147 bioH CDS COG0596 248487 249263 + [R] Predicted hydrolases or acyltransferases (alpha/beta hydrolase 148 cds-WP_104944994.1 CDS NA 249721 254550 - NA 149 cds-CPI84_RS01175 CDS COG3335 254741 255771 - [L] Transposase and inactivated derivatives 150 cds-WP_014539707.1 CDS COG2183 256601 258928 - [K] Transcriptional accessory protein greB CDS COG0782 259053 259532 - [K] Transcription elongation factor 151 ompR CDS COG0745 259822 260541 + [TK] Response regulators consisting of a CheY-like envZ CDS COG2205 260538 261887 + [T] Osmosensitive K+ channel histidine kinase 152 pckA CDS COG1866 261933 263552 - [C] Phosphoenolpyruvate carboxykinase (ATP) 153 hslO CDS COG1281 263935 264813 - [O] Disulfide bond chaperones of the HSP33 hslR CDS COG1188 264836 265237 - [J] Ribosome-associated heat shock protein implicated in 154 cds-WP_014539700.1 CDS ROG7908 265391 267529 - NA 155 nudE CDS COG0494 267965 268531 + [LR] NTP pyrophosphohydrolases including oxidative damage repair 156 mrcA CDS COG5009 268648 271194 - [M] Membrane carboxypeptidase/penicillin-binding protein 157 pilM CDS COG4972 271310 272137 + [NU] Tfp pilus assembly protein, ATPase PilM cds-WP_014539696.1 CDS ROG1922 272137 272685 + NA cds-WP_015899109.1 CDS NA 272678 273178 + NA cds-WP_014539694.1 CDS NA 273168 273530 + NA hofQ CDS COG4796 273493 274737 + [U] Type II secretory pathway, component HofQ 158 aroK CDS COG0703 275129 275650 + [E] Shikimate kinase aroB CDS COG0337 275704 276791 + [E] 3-dehydroquinate synthetase cds-WP_014539690.1 CDS COG3266 276883 277848 + [S] Uncharacterized protein conserved in bacteria dam CDS COG0338 277968 278789 + [L] Site-specific DNA methylase rpe CDS COG0036 278827 279513 + [G] Pentose-5-phosphate-3-epimerase cds-WP_015899107.1 CDS COG0546 279497 280198 + [R] Predicted phosphatases trpS CDS COG0180 280191 281195 + [J] Tryptophanyl-tRNA synthetase 159 cds-WP_049774205.1 CDS NA 281241 281714 - NA 160 cds-WP_015899105.1 CDS ROG1745 281820 283097 + NA 161 cds-CPI84_RS01310 CDS ROG7172 283414 284028 - NA 162 tsgA CDS NA 284394 285575 - NA 163 ppiA CDS COG0652 285851 286423 + [O] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin cds-WP_014539680.1 CDS COG0512 286481 287059 + [EH] Anthranilate/para-aminobenzoate synthases component II cds-WP_014539679.1 CDS COG4992 287146 288363 + [E] Ornithine/acetylornithine aminotransferase 164 cds-WP_015899103.1 CDS COG1289 288409 290487 - [S] Predicted membrane protein 165 crp CDS COG0664 290548 291180 - [T] cAMP-binding proteins - catabolite gene activator 166 cds-WP_015899102.1 CDS COG1765 291546 291953 + [O] Predicted redox protein, regulator of disulfide 167 cds-WP_014542616.1 CDS COG3954 291990 292859 - [C] Phosphoribulokinase cds-WP_015899101.1 CDS COG3089 292967 293185 - [S] Uncharacterized protein conserved in bacteria cds-WP_014539672.1 CDS COG0429 293185 294201 - [R] Predicted hydrolase of the alpha/beta-hydrolase fold 168 cds-WP_015899100.1 CDS COG1280 294263 294865 + [E] Putative threonine efflux protein 169 tauA CDS COG4521 295065 296042 + [P] ABC-type taurine transport system, periplasmic component tauB CDS COG4525 296057 296824 + [P] ABC-type taurine transport system, ATPase component tauC CDS COG0600 296821 297648 + [P] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component tauD CDS COG2175 297645 298484 + [Q] Probable taurine catabolism dioxygenase 170 cds-WP_014539665.1 CDS COG0488 298682 300583 - [R] ATPase components of ABC transporters with 171 kefG CDS COG2249 300710 301261 + [R] Putative NADPH-quinone reductase (modulator of drug kefB CDS COG0475 301262 303067 + [P] Kef-type K+ transport systems, membrane components 172 cds-WP_014539662.1 CDS COG3529 303124 303318 + [R] Predicted nucleic-acid-binding protein containing a Zn-ribbon 173 slyD CDS COG1047 303458 304000 + [O] FKBP-type peptidyl-prolyl cis-trans isomerases 2 174 cds-WP_015899099.1 CDS COG2900 304224 304442 - [S] Uncharacterized protein conserved in bacteria 175 fkpA CDS COG0545 304734 305576 + [O] FKBP-type peptidyl-prolyl cis-trans isomerases 1 176 cds-WP_015899097.1 CDS COG2964 305781 306503 + [S] Uncharacterized protein conserved in bacteria tusD CDS COG1553 306503 306889 + [P] Uncharacterized conserved protein involved in intracellular tusC CDS COG2923 306889 307248 + [P] Uncharacterized protein involved in the oxidation tusB CDS COG2168 307256 307543 + [P] Uncharacterized conserved protein involved in oxidation 177 rpsL CDS COG0048 307670 308044 + [J] Ribosomal protein S12 rpsG CDS COG0049 308141 308611 + [J] Ribosomal protein S7 fusA CDS COG0480 308706 310814 + [J] Translation elongation factors (GTPases) tuf CDS COG0050 310887 312071 + [J] GTPases - translation elongation factors rpsJ CDS COG0051 312402 312713 + [J] Ribosomal protein S10 rplC CDS COG0087 312746 313375 + [J] Ribosomal protein L3 rplD CDS COG0088 313386 313991 + [J] Ribosomal protein L4 rplW CDS COG0089 313988 314290 + [J] Ribosomal protein L23 rplB CDS COG0090 314308 315129 + [J] Ribosomal protein L2 rpsS CDS COG0185 315146 315424 + [J] Ribosomal protein S19 rplV CDS COG0091 315439 315771 + [J] Ribosomal protein L22 rpsC CDS COG0092 315789 316487 + [J] Ribosomal protein S3 rplP CDS COG0197 316500 316910 + [J] Ribosomal protein L16/L10E rpmC CDS COG0255 316910 317101 + [J] Ribosomal protein L29 rpsQ CDS COG0186 317101 317355 + [J] Ribosomal protein S17 rplN CDS COG0093 317522 317893 + [J] Ribosomal protein L14 rplX CDS COG0198 317904 318218 + [J] Ribosomal protein L24 rplE CDS COG0094 318233 318772 + [J] Ribosomal protein L5 rpsN CDS COG0199 318786 319091 + [J] Ribosomal protein S14 rpsH CDS COG0096 319122 319514 + [J] Ribosomal protein S8 rplF CDS COG0097 319526 320059 + [J] Ribosomal protein L6P/L9E rplR CDS COG0256 320069 320422 + [J] Ribosomal protein L18 rpsE CDS COG0098 320437 320937 + [J] Ribosomal protein S5 rpmD CDS COG1841 320943 321122 + [J] Ribosomal protein L30/L7E rplO CDS COG0200 321126 321560 + [J] Ribosomal protein L15 secY CDS COG0201 321568 322899 + [U] Preprotein translocase subunit SecY rpmJ CDS COG0257 322932 323048 + [J] Ribosomal protein L36 rpsM CDS COG0099 323195 323551 + [J] Ribosomal protein S13 rpsK CDS COG0100 323568 323957 + [J] Ribosomal protein S11 rpsD CDS COG0522 323991 324611 + [J] Ribosomal protein S4 and related proteins rpoA CDS COG0202 324637 325626 + [K] DNA-directed RNA polymerase, alpha subunit/40 kD rplQ CDS COG0203 325667 326053 + [J] Ribosomal protein L17 178 cds-WP_015899094.1 CDS ROG0120 326172 326543 + NA zntR CDS COG0789 326543 326974 + [K] Predicted transcriptional regulators cds-WP_015899093.1 CDS COG3036 327031 327240 + [S] Uncharacterized protein conserved in bacteria 179 mscL CDS COG1970 327322 327735 - [M] Large-conductance mechanosensitive channel 180 trkA CDS COG0569 327876 329252 - [P] K+ transport systems, NAD-binding component rsmB CDS COG0144 329311 330600 - [J] tRNA and rRNA cytosine-C5-methylases fmt CDS COG0223 330651 331598 - [J] Methionyl-tRNA formyltransferase def CDS COG0242 331622 332131 - [J] N-formylmethionyl-tRNA deformylase 181 dprA CDS COG0758 332258 333382 + [LU] Predicted Rossmann fold nucleotide-binding protein involved smg CDS COG2922 333354 333827 + [S] Uncharacterized protein conserved in bacteria cds-WP_015899090.1 CDS COG0551 333853 334422 + [L] Zn-finger domain associated with topoisomerase type tsaC CDS COG0009 334400 334972 + [J] Putative translation factor (SUA5) aroE CDS COG0169 334985 335803 + [E] Shikimate 5-dehydrogenase cds-WP_041474057.1 CDS ROG5157 335800 336060 + NA 182 cds-WP_014539631.1 CDS COG0663 336027 336581 - [R] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 183 rna-CPI84_RS01680 rRNA NA 337107 338646 + NA rna-CPI84_RS01685 tRNA NA 338720 338796 + NA rna-CPI84_RS01690 tRNA NA 338948 339023 + NA rna-CPI84_RS01695 rRNA NA 339230 342224 + NA rrf rRNA NA 342436 342551 + NA 184 metA CDS COG1897 342818 343747 + [E] Homoserine trans-succinylase 185 cds-WP_015899088.1 CDS COG1283 344742 346367 + [P] Na+/phosphate symporter 186 lysC CDS COG0527 346468 347820 - [E] Aspartokinases 187 pgi CDS COG0166 348477 350120 + [G] Glucose-6-phosphate isomerase 188 cds-WP_015899087.1 CDS NA 350794 351060 + NA 189 cds-WP_014539623.1 CDS ROG4342 351138 351785 + NA cds-WP_014539622.1 CDS ROG0647 351785 352540 + NA cds-WP_014539621.1 CDS ROG0647 352540 354633 + NA 190 psiE CDS COG3223 354863 355279 + [S] Predicted membrane protein 191 ubiC CDS COG3161 355418 355942 + [H] 4-hydroxybenzoate synthetase (chorismate lyase) ubiA CDS COG0382 355944 356810 + [H] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 192 plsB CDS COG2937 356906 359329 - [I] Glycerol-3-phosphate O-acyltransferase 193 cds-WP_015899084.1 CDS COG0818 359457 359822 + [M] Diacylglycerol kinase 194 lexA CDS COG1974 359933 360541 + [KT] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 195 dinF CDS COG0534 360724 362046 + [V] Na+-driven multidrug efflux pump 196 cds-WP_015899082.1 CDS COG3237 362261 362470 + [S] Uncharacterized protein conserved in bacteria 197 zur CDS COG0735 362546 363055 - [P] Fe2+/Zn2+ uptake regulation proteins 198 cds-WP_014539609.1 CDS ROG7083 363530 364762 + NA 199 dusA CDS COG0042 364880 365875 + [J] tRNA-dihydrouridine synthase 200 pspG CDS ROG4790 366031 366264 + NA 201 cds-WP_014539605.1 CDS COG0604 366491 367471 - [CR] NADPH:quinone reductase and related Zn-dependent oxidoreductases 202 dnaB CDS COG0305 367572 368987 + [L] Replicative DNA helicase 203 cds-CPI84_RS01820 CDS COG1522 369146 369417 + [K] Transcriptional regulators cds-WP_014539602.1 CDS COG1284 369380 369802 + [S] Uncharacterized conserved protein 204 cds-WP_015899079.1 CDS COG1448 369919 371112 + [E] Aspartate/tyrosine/aromatic aminotransferase 205 cds-WP_015899078.1 CDS COG0432 371227 371646 + [S] Uncharacterized conserved protein 206 cds-WP_187298263.1 CDS ROG3089 372098 376201 - NA 207 cds-WP_104945182.1 CDS NA 376374 376613 - NA 208 cds-CPI84_RS01855 CDS NA 377514 377929 + NA 209 cds-WP_148666342.1 CDS COG2315 378010 378378 + [S] Uncharacterized protein conserved in bacteria 210 cds-WP_187298264.1 CDS ROG3089 378444 382256 - NA 211 cds-WP_041474148.1 CDS NA 382431 382622 - NA 212 cds-CPI84_RS19585 CDS COG0432 383533 383635 + [S] Uncharacterized conserved protein cds-WP_104945183.1 CDS COG2315 383748 384083 + [S] Uncharacterized protein conserved in bacteria 213 cds-WP_187298265.1 CDS ROG3089 384149 387943 - NA 214 cds-WP_041474148.1-2 CDS NA 388117 388308 - NA 215 cds-CPI84_RS01890 CDS NA 389209 389624 + NA 216 cds-WP_041474149.1 CDS COG2315 389736 390071 + [S] Uncharacterized protein conserved in bacteria 217 cds-WP_015899067.1 CDS ROG3089 390137 394258 - NA 218 cds-WP_041474148.1-3 CDS NA 394433 394624 - NA 219 cds-WP_014539587.1 CDS COG1064 395917 396969 - [R] Zn-dependent alcohol dehydrogenases 220 uvrA CDS COG0178 397253 400081 - [L] Excinuclease ATPase subunit 221 ssb1 CDS COG0629 400334 400885 + [L] Single-stranded DNA-binding protein 222 cds-CPI84_RS01930 CDS COG4974 401325 401477 + [L] Site-specific recombinase XerD cds-WP_014539582.1 CDS COG3609 401530 401793 + [K] Predicted transcriptional regulators containing the CopG/Arc/MetJ cds-WP_014539581.1 CDS COG3668 401790 402083 + [R] Plasmid stabilization system protein 223 cds-WP_187298266.1 CDS NA 402363 402731 + NA 224 cds-WP_014539579.1 CDS COG2831 403046 404731 + [U] Hemolysin activation/secretion protein cds-WP_014539578.1 CDS COG3210 404799 410057 + [U] Large exoproteins involved in heme utilization 225 cds-WP_015899061.1 CDS NA 410451 410900 + NA 226 cds-WP_014542534.1 CDS ROG6591 411699 412091 - NA 227 cds-WP_148217844.1 CDS COG2832 412719 412937 - [S] Uncharacterized protein conserved in bacteria 228 soxS CDS COG2207 412995 413390 - [K] AraC-type DNA-binding domain-containing proteins 229 soxR CDS COG0789 413493 413960 + [K] Predicted transcriptional regulators cds-WP_015899060.1 CDS COG0625 414004 414666 + [O] Glutathione S-transferase 230 cds-WP_014539569.1 CDS COG2252 415134 416483 + [R] Permeases 231 cds-WP_014539568.1 CDS COG0025 416658 418307 + [P] NhaP-type Na+/H+ and K+/H+ antiporters 232 cds-WP_015899059.1 CDS COG0583 418357 419259 - [K] Transcriptional regulator 233 cds-CPI84_RS02010 CDS COG1346 419368 419825 + [M] Putative effector of murein hydrolase 234 cds-CPI84_RS02015 CDS COG4147 419828 421475 - [R] Predicted symporter cds-WP_014542525.1 CDS COG3162 421472 421783 - [S] Predicted membrane protein acs CDS COG0365 421946 423901 - [I] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 235 gltP CDS COG1301 424408 425709 + [C] Na+/H+-dicarboxylate symporters 236 cds-WP_014539557.1 CDS COG0840 426055 427599 + [NT] Methyl-accepting chemotaxis protein 237 cds-WP_014539556.1 CDS NA 428328 433202 + NA 238 cds-WP_014539555.1 CDS NA 433344 433493 + NA 239 cds-WP_015899057.1 CDS ROG3866 433681 434220 - NA cds-WP_015899056.1 CDS ROG6371 434243 434473 - NA 240 sbmA CDS COG1133 434619 435845 - [I] ABC-type long-chain fatty acid transport system, 241 cds-WP_014539551.1 CDS COG2200 436289 438748 + [T] FOG: EAL domain 242 cds-WP_014539550.1 CDS ROG1383 439004 439741 + NA cds-WP_014539549.1 CDS ROG0911 439744 441528 + NA cds-WP_014539548.1 CDS COG2010 441539 442855 + [C] Cytochrome c, mono- and diheme variants 243 cds-WP_014539547.1 CDS NA 443106 443294 + NA cds-WP_014539546.1 CDS NA 443298 443900 + NA cds-WP_104944977.1-2 CDS COG2963 443946 444204 + [L] Transposase and inactivated derivatives cds-WP_104944977.1-2_2 CDS COG4413 444204 445096 + [E] Urea transporter 244 cds-WP_014539545.1 CDS ROG7340 445189 445653 + NA 245 cds-WP_014539544.1 CDS COG0583 445776 446684 - [K] Transcriptional regulator 246 cds-WP_014539543.1 CDS COG0702 446781 447851 + [MG] Predicted nucleoside-diphosphate-sugar epimerases 247 cds-WP_014539542.1 CDS ROG4987 447985 448764 + NA 248 cds-WP_014539541.1 CDS COG0583 448842 449750 - [K] Transcriptional regulator 249 cds-WP_014539540.1 CDS COG1280 450370 450996 - [E] Putative threonine efflux protein 250 cds-WP_014539539.1 CDS COG1626 451659 453269 + [G] Neutral trehalase 251 cds-WP_015899052.1 CDS COG5383 453803 455143 + [S] Uncharacterized protein conserved in bacteria 252 hchA CDS COG0693 455443 456291 + [R] Putative intracellular protease/amidase 253 cds-WP_014539536.1 CDS COG1028 456353 457141 - [IQR] Dehydrogenases with different specificities (related to 254 cds-WP_014539535.1 CDS NA 457502 457882 - NA 255 cds-WP_015899049.1 CDS COG1629 458254 460371 + [P] Outer membrane receptor proteins, mostly Fe 256 cds-WP_012669441.1 CDS COG4264 460446 462800 - [Q] Siderophore synthetase component cds-WP_012669440.1 CDS COG3486 462802 464094 - [Q] Lysine/ornithine N-monooxygenase cds-WP_012669439.1 CDS COG0076 464105 465658 - [E] Glutamate decarboxylase and related PLP-dependent proteins 257 cds-WP_049779074.1 CDS NA 466702 468351 + NA cds-WP_012669436.1 CDS NA 468362 469642 + NA cds-WP_014539530.1 CDS NA 469606 470097 + NA 258 cds-WP_012669434.1 CDS NA 470325 471425 + NA 259 cds-WP_012669433.1 CDS COG3209 471497 476461 + [M] Rhs family protein 260 cds-CPI84_RS19600 CDS NA 476452 476679 - NA 261 cds-WP_012669430.1 CDS NA 477559 477951 + NA 262 pilM_2 CDS NA 478073 478381 + NA cds-WP_012669428.1 CDS ROG7272 478388 480034 + NA pilO2 CDS NA 480039 481319 + NA pilP CDS NA 481309 481833 + NA tadA CDS COG2804 481849 483327 + [NU] Type II secretory pathway, ATPase PulE/Tfp cds-WP_014539528.1 CDS NA 483324 484436 + NA cds-WP_012669423.1 CDS NA 484461 485054 + NA cds-WP_012669422.1 CDS NA 485061 485558 + NA cds-WP_012669421.1 CDS ROG2398 485555 486217 + NA pilV CDS NA 486207 487619 + NA 263 cds-WP_012669419.1 CDS ROG4369 487673 488851 - NA 264 cds-CPI84_RS02275 CDS COG3328 489460 490206 + [L] Transposase and inactivated derivatives cds-WP_012669415.1 CDS COG3328 490240 491448 + [L] Transposase and inactivated derivatives 265 cds-CPI84_RS02285 CDS NA 491484 491816 - NA 266 cds-CPI84_RS02290 CDS ROG6591 491988 492723 + NA 267 cds-WP_104944977.1-3 CDS COG2963 493655 493913 - [L] Transposase and inactivated derivatives cds-WP_104944977.1-3_2 CDS COG4413 492763 493655 - [E] Urea transporter 268 cds-CPI84_RS02300 CDS COG2801 493971 494330 + [L] Transposase and inactivated derivatives 269 cds-WP_012669409.1 CDS NA 494643 494867 + NA 270 cds-WP_012669407.1 CDS COG3328 495689 496897 - [L] Transposase and inactivated derivatives cds-WP_012669406.1 CDS COG3328 496954 498117 - [L] Transposase and inactivated derivatives cds-WP_012669405.1 CDS ROG2759 498174 498704 - NA 271 cds-WP_012669404.1 CDS ROG2086 499174 499638 + NA cds-WP_012669403.1 CDS NA 499632 499937 + NA 272 cds-WP_004168501.1 CDS ROG1640 500079 500399 + NA cds-WP_004168502.1 CDS ROG5111 500390 500635 + NA cds-WP_012669266.1 CDS ROG1634 500648 501007 + NA cds-WP_012669265.1 CDS ROG1650 501017 501391 + NA cds-WP_012669264.1 CDS ROG0991 501388 502047 + NA cds-WP_012669263.1 CDS ROG0907 502044 502907 + NA cds-WP_012669402.1 CDS ROG0811 502907 504424 + NA cds-WP_041474143.1 CDS ROG0899 504460 504858 + NA cds-WP_012669401.1 CDS ROG0797 504858 507659 + NA cds-CPI84_RS02385 CDS NA 507671 508067 + NA 273 cds-WP_104945000.1 CDS NA 508341 509693 - NA 274 cds-WP_012666458.1-2 CDS COG3335 509818 510858 - [L] Transposase and inactivated derivatives 275 cds-CPI84_RS02405 CDS NA 511265 511746 - NA 276 xerC CDS COG4974 512023 513078 - [L] Site-specific recombinase XerD cds-WP_104945002.1 CDS COG0358 513277 515964 - [L] DNA primase (bacterial type) 277 cds-WP_104945184.1 CDS COG2932 516097 516429 + [K] Predicted transcriptional regulator 278 cds-WP_104945003.1 CDS NA 516504 516806 + NA 279 cds-WP_041474388.1 CDS NA 516863 517213 - NA cds-WP_083791971.1 CDS NA 517219 517518 - NA 280 cds-WP_104945004.1 CDS NA 517688 517870 - NA 281 cds-WP_187298267.1 CDS NA 518004 518180 + NA 282 xerC_2 CDS COG4974 518772 519827 - [L] Site-specific recombinase XerD cds-WP_104945002.1-2 CDS COG0358 520026 522713 - [L] DNA primase (bacterial type) 283 cds-WP_104945184.1-2 CDS COG2932 522846 523178 + [K] Predicted transcriptional regulator 284 cds-WP_104945003.1-2 CDS NA 523253 523555 + NA 285 cds-WP_041474388.1-2 CDS NA 523612 523962 - NA cds-WP_148666346.1 CDS COG3209 523968 524486 - [M] Rhs family protein cds-WP_081441632.1 CDS NA 524437 524619 - NA 286 cds-WP_157861020.1 CDS NA 524754 524930 + NA 287 cds-WP_012669379.1 CDS COG2026 525432 525716 - [JD] Cytotoxic translational repressor of toxin-antitoxin stability cds-WP_012669378.1 CDS COG3077 525706 525948 - [L] DNA-damage-inducible protein J 288 xerC_3 CDS COG4974 526209 527264 - [L] Site-specific recombinase XerD cds-WP_012669376.1 CDS COG0358 527479 530172 - [L] DNA primase (bacterial type) 289 cds-WP_012669375.1 CDS COG2932 530285 530686 + [K] Predicted transcriptional regulator 290 cds-WP_012669374.1 CDS NA 530765 531067 + NA 291 cds-WP_012669373.1 CDS ROG6489 531127 531579 - NA cds-CPI84_RS02525 CDS COG3209 531584 532048 - [M] Rhs family protein cds-WP_081441632.1-2 CDS NA 532086 532268 - NA 292 cds-WP_157861020.1-2 CDS NA 532403 532579 + NA 293 cds-WP_012669379.1-2 CDS COG2026 533081 533365 - [JD] Cytotoxic translational repressor of toxin-antitoxin stability cds-WP_012669378.1-2 CDS COG3077 533355 533597 - [L] DNA-damage-inducible protein J 294 xerC_4 CDS COG4974 533858 534913 - [L] Site-specific recombinase XerD cds-WP_012669376.1-2 CDS COG0358 535128 537821 - [L] DNA primase (bacterial type) 295 cds-CPI84_RS02560 CDS COG2932 537934 538334 + [K] Predicted transcriptional regulator 296 cds-WP_012669374.1-2 CDS NA 538413 538715 + NA 297 cds-WP_012669373.1-2 CDS ROG6489 538775 539227 - NA cds-WP_104945005.1 CDS COG3209 539232 543488 - [M] Rhs family protein cds-WP_012669369.1 CDS COG5435 543501 543950 - [S] Uncharacterized conserved protein 298 cds-WP_012669368.1 CDS COG0586 544087 544743 - [S] Uncharacterized membrane-associated protein 299 metC CDS COG0626 544894 546087 - [E] Cystathionine beta-lyases/cystathionine gamma-synthases 300 exbB CDS COG0811 546332 547066 + [U] Biopolymer transport proteins exbD CDS COG0848 547072 547494 + [U] Biopolymer transport protein 301 cds-WP_012669364.1 CDS COG0477 547550 548869 - [GEPR] Permeases of the major facilitator superfamily 302 cds-WP_012669363.1 CDS COG1028 549320 550213 - [IQR] Dehydrogenases with different specificities (related to 303 cds-CPI84_RS02615 CDS NA 550461 551440 - NA cds-WP_012669361.1 CDS COG3188 551437 553857 - [NU] P pilus assembly protein, porin PapC cds-WP_012669360.1 CDS COG3121 553861 554580 - [NU] P pilus assembly protein, chaperone PapD cds-WP_012669359.1 CDS COG5430 554606 555133 - [S] Uncharacterized secreted protein cds-WP_012669358.1 CDS COG5430 555155 555721 - [S] Uncharacterized secreted protein 304 cds-WP_012669357.1 CDS COG1167 556229 557641 + [KE] Transcriptional regulators containing a DNA-binding HTH 305 cds-WP_012669356.1 CDS NA 557672 558154 - NA 306 cds-WP_012669355.1 CDS COG4461 558351 559343 + [S] Uncharacterized protein conserved in bacteria, putative 307 cds-WP_014539490.1 CDS COG1300 559351 559809 - [S] Uncharacterized membrane protein cds-WP_014539489.1 CDS COG3710 559784 560683 - [K] DNA-binding winged-HTH domains 308 cds-WP_012669352.1 CDS COG0614 561429 562559 + [P] ABC-type Fe3+-hydroxamate transport system, periplasmic component 309 ftnA CDS COG1528 562634 563148 - [P] Ferritin-like protein 310 cds-WP_014543221.1 CDS NA 564402 564560 + NA cds-WP_012669349.1 CDS COG1495 564569 565120 + [O] Disulfide bond formation protein DsbB 311 cds-WP_041474048.1 CDS ROG2427 565204 565980 + NA 312 ggt_2 CDS COG0405 566051 567813 + [E] Gamma-glutamyltransferase 313 cds-WP_104945006.1 CDS COG2723 567997 569406 - [G] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase cds-WP_012669345.1 CDS COG1447 569630 569986 - [G] Phosphotransferase system cellobiose-specific component IIA cds-WP_012669344.1 CDS COG1455 569989 571308 - [G] Phosphotransferase system cellobiose-specific component IIC cds-WP_012669343.1 CDS COG1440 571305 571628 - [G] Phosphotransferase system cellobiose-specific component IIB 314 cds-WP_041474047.1 CDS COG1609 571972 572997 + [K] Transcriptional regulators 315 cds-CPI84_RS02715 CDS NA 573323 573654 - NA 316 cds-WP_012669340.1 CDS COG1522 573764 574234 - [K] Transcriptional regulators 317 yddG CDS COG0697 574695 575591 - [GER] Permeases of the drug/metabolite transporter (DMT) 318 mdtI CDS COG2076 575696 576025 - [P] Membrane transporters of cations and cationic mdtJ CDS COG2076 576012 576356 - [P] Membrane transporters of cations and cationic 319 cds-CPI84_RS02740 CDS COG3275 576917 577094 + [T] Putative regulator of cell autolysis 320 cds-WP_012669335.1 CDS COG1966 577120 577458 - [T] Carbon starvation protein, predicted membrane protein 321 cds-WP_014539477.1 CDS NA 577551 577709 + NA 322 cds-WP_104945185.1 CDS NA 578217 578456 + NA 323 ampR CDS COG0583 578609 579508 - [K] Transcriptional regulator 324 cds-WP_012669332.1 CDS COG1680 579633 580808 + [V] Beta-lactamase class C and other penicillin 325 ivy CDS ROG7878 580855 581301 - NA 326 cds-WP_012669330.1 CDS ROG4620 581670 582140 + NA 327 cds-WP_012669329.1 CDS NA 582322 584610 + NA 328 cds-WP_012669328.1 CDS COG1834 584890 585990 + [E] N-Dimethylarginine dimethylaminohydrolase 329 cds-WP_104945187.1 CDS ROG5589 586103 587350 + NA cds-WP_104945007.1 CDS ROG5589 587391 588653 + NA 330 cds-WP_104945008.1 CDS COG0824 588728 589111 - [R] Predicted thioesterase cds-WP_104945009.1 CDS COG0454 589167 589586 - [KR] Histone acetyltransferase HPA2 and related acetyltransferases sctU CDS COG4792 589648 590730 - [U] Type III secretory pathway, component EscU sctT CDS COG4791 590732 591529 - [U] Type III secretory pathway, component EscT sctS CDS COG4794 591531 591791 - [U] Type III secretory pathway, component EscS sctR CDS COG4790 591799 592452 - [U] Type III secretory pathway, component EscR cds-WP_012669320.1 CDS COG1886 592449 593474 - [NU] Flagellar motor switch/type III secretory pathway cds-WP_012669319.1 CDS NA 593471 593947 - NA cds-WP_012669318.1 CDS NA 593947 594393 - NA sctN CDS COG1157 594380 595744 - [NU] Flagellar biosynthesis/type III secretory pathway ATPase sctD CDS ROG8041 595738 596673 - NA sctV CDS COG4789 596652 598799 - [U] Type III secretory pathway, component EscV sctW CDS ROG5311 598800 599966 - NA 331 cds-WP_012669313.1 CDS COG1595 600246 600794 + [K] DNA-directed RNA polymerase specialized sigma subunit, 332 cds-WP_012669312.1 CDS COG4585 600941 602425 + [T] Signal transduction histidine kinase cds-WP_012669311.1 CDS COG2197 602429 603070 + [TK] Response regulator containing a CheY-like receiver 333 cds-WP_012669310.1 CDS COG1221 603432 604406 + [KT] Transcriptional regulators containing an AAA-type ATPase 334 cds-WP_012669309.1 CDS NA 604529 604732 + NA 335 cds-WP_012669308.1 CDS NA 604801 605163 + NA sctJ CDS COG4669 605170 605949 + [U] Type III secretory pathway, lipoprotein EscJ cds-WP_014539469.1 CDS NA 605942 606532 + NA sctL CDS ROG6439 606526 607116 + NA 336 cds-WP_012669304.1 CDS NA 607206 607430 + NA cds-WP_012669303.1 CDS NA 607417 607848 + NA sctC CDS COG1450 607841 609871 + [NU] Type II secretory pathway, component PulD cds-WP_012669301.1 CDS NA 609885 610079 + NA cds-WP_012669300.1 CDS NA 610072 610422 + NA 337 cds-WP_012669299.1 CDS NA 610580 611866 + NA 338 cds-WP_012669298.1 CDS ROG4026 611980 612447 + NA cds-WP_012669297.1 CDS NA 612444 613649 + NA 339 cds-WP_012669296.1 CDS NA 613770 614102 - NA cds-WP_012669295.1 CDS ROG1832 614099 615451 - NA 340 cds-WP_012669294.1 CDS NA 615650 621166 + NA cds-WP_012669293.1 CDS ROG4026 621228 621647 + NA 341 cds-WP_012669292.1 CDS NA 622367 623167 + NA 342 cds-WP_157861019.1 CDS NA 623298 623678 + NA 343 cds-WP_012669291.1 CDS ROG0210 623815 624072 + NA 344 cds-CPI84_RS02975 CDS COG0583 624307 625223 - [K] Transcriptional regulator 345 cds-WP_012669289.1 CDS COG0673 625509 626678 + [R] Predicted dehydrogenases and related proteins 346 cds-WP_012669288.1 CDS COG1028 626788 626970 - [IQR] Dehydrogenases with different specificities (related to cds-WP_012669287.1 CDS COG1028 627178 628008 - [IQR] Dehydrogenases with different specificities (related to 347 cds-WP_014539458.1 CDS COG0583 628473 629366 - [K] Transcriptional regulator 348 cds-WP_014539457.1 CDS COG0841 629679 629840 + [V] Cation/multidrug efflux pump 349 cds-WP_012669284.1 CDS COG1917 630091 630489 + [S] Uncharacterized conserved protein, contains double-stranded beta-helix 350 cds-WP_041474144.1 CDS COG2814 630861 632051 + [G] Arabinose efflux permease 351 cds-WP_012669282.1 CDS COG4635 632196 632792 + [CH] Flavodoxin 352 cds-WP_012669281.1 CDS ROG1360 632905 633849 + NA 353 cds-WP_012669280.1 CDS COG0656 633922 634773 + [R] Aldo/keto reductases, related to diketogulonate reductase cds-WP_012669279.1 CDS COG0667 634805 635794 + [C] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 354 cds-WP_012669277.1 CDS NA 636335 637144 + NA cds-WP_012669276.1 CDS ROG2821 637147 637593 + NA 355 cds-WP_012669275.1 CDS ROG1138 638111 638605 + NA 356 cds-WP_012669274.1 CDS ROG6716 638700 638903 + NA ssb CDS COG0629 638914 639425 + [L] Single-stranded DNA-binding protein 357 cds-WP_012669272.1 CDS ROG1780 639517 639759 + NA cds-WP_012669271.1 CDS ROG0526 639743 639991 + NA 358 cds-WP_012669270.1 CDS NA 640738 641052 - NA 359 cds-WP_012669269.1 CDS NA 641135 641449 - NA cds-CPI84_RS03095 CDS NA 641452 642284 - NA 360 cds-WP_004168501.1-2 CDS ROG1640 642496 642816 + NA cds-WP_004168502.1-2 CDS ROG5111 642807 643052 + NA cds-WP_012669266.1-2 CDS ROG1634 643065 643424 + NA cds-WP_012669265.1-2 CDS ROG1650 643434 643808 + NA cds-WP_012669264.1-2 CDS ROG0991 643805 644464 + NA cds-WP_012669263.1-2 CDS ROG0907 644461 645324 + NA cds-WP_012669262.1 CDS ROG0811 645324 646832 + NA cds-WP_041474143.1-2 CDS ROG0899 646868 647266 + NA cds-WP_012669260.1 CDS ROG0797 647266 650067 + NA cds-WP_012669259.1 CDS NA 650079 650483 + NA 361 cds-WP_004171975.1 CDS NA 650576 650734 - NA 362 cds-WP_012669258.1 CDS ROG2190 650914 653094 + NA 363 cds-WP_012669257.1 CDS ROG6829 653481 654689 + NA cds-WP_012669256.1 CDS ROG2761 654686 655192 + NA cds-WP_012669255.1 CDS ROG3799 655189 657153 + NA 364 cds-WP_012669254.1 CDS NA 657454 658716 - NA 365 cds-WP_148217853.1 CDS ROG6998 659060 659329 - NA 366 cds-WP_012669253.1 CDS ROG1890 659921 660328 + NA cds-WP_012669252.1 CDS ROG1010 660325 661296 + NA cds-WP_012669251.1 CDS ROG1517 661308 662711 + NA cds-WP_012669250.1 CDS ROG4106 662713 663060 + NA cds-WP_012669249.1 CDS ROG0967 663062 664591 + NA 367 cds-CPI84_RS03205 CDS NA 664735 664920 - NA 368 cds-WP_148217840.1 CDS NA 665204 665806 - NA 369 cds-WP_187298268.1 CDS ROG2400 666153 667382 + NA 370 cds-WP_012669246.1 CDS COG0270 667401 668822 - [L] Site-specific DNA methylase 371 cds-WP_012669245.1 CDS NA 669903 670289 - NA 372 cds-WP_104945010.1 CDS ROG1837 670519 671403 + NA 373 cds-WP_104945011.1 CDS NA 671745 672140 + NA 374 cds-WP_104945012.1 CDS NA 672321 672932 + NA 375 cds-WP_104945013.1 CDS NA 673037 673345 + NA 376 cds-WP_104945014.1 CDS ROG2393 673424 674032 + NA 377 cds-WP_104945015.1 CDS COG4227 674112 675092 + [L] Antirestriction protein 378 cds-WP_012666836.1 CDS NA 675189 676130 + NA 379 cds-WP_012666837.1 CDS NA 676226 676951 + NA 380 cds-WP_012666838.1 CDS NA 677072 677632 - NA 381 cds-WP_012669241.1 CDS ROG0271 677840 679387 + NA cds-WP_012666840.1 CDS NA 679421 680380 + NA 382 rna-CPI84_RS03285 tRNA NA 680657 680732 - NA 383 cds-WP_012669239.1 CDS COG1982 681404 683548 + [E] Arginine/lysine/ornithine decarboxylases 384 cds-WP_012669238.1 CDS COG1309 683610 684263 - [K] Transcriptional regulator 385 mltC CDS COG0741 684847 685926 - [M] Soluble lytic murein transglycosylase and related cds-WP_012669236.1 CDS COG2924 685979 686251 - [CO] Fe-S cluster protector protein mutY CDS COG1194 686262 687338 - [L] A/G-specific DNA glycosylase 386 trmB CDS COG0220 687583 688302 + [R] Predicted S-adenosylmethionine-dependent methyltransferase cds-WP_012669233.1 CDS COG3171 688302 688628 + [S] Uncharacterized protein conserved in bacteria 387 cds-WP_012669232.1 CDS ROG7720 688758 689474 + NA 388 cds-CPI84_RS03330 CDS COG1662 689703 689867 + [L] Transposase and inactivated derivatives, IS1 family 389 cds-WP_012669230.1 CDS COG3591 690102 691331 + [E] V8-like Glu-specific endopeptidase 390 hemW CDS COG0635 691415 692551 - [H] Coproporphyrinogen III oxidase and related Fe-S rdgB CDS COG0127 692544 693137 - [F] Xanthosine triphosphate pyrophosphatase cds-WP_012669227.1 CDS COG0762 693269 693808 - [S] Predicted integral membrane protein cds-WP_012669226.1 CDS COG0325 693817 694530 - [R] Predicted enzyme with a TIM-barrel fold 391 cds-WP_012669225.1 CDS COG2805 694546 695553 + [NU] Tfp pilus assembly protein, pilus retraction 392 cds-WP_012669224.1 CDS ROG5829 695563 696204 - NA cds-WP_012669223.1 CDS COG1595 696191 696757 - [K] DNA-directed RNA polymerase specialized sigma subunit, cds-CPI84_RS03375 CDS COG4232 696839 698077 - [OC] Thiol:disulfide interchange protein cds-WP_012669220.1 CDS COG1225 698102 698665 - [O] Peroxiredoxin 393 ruvX CDS COG0816 698807 699232 - [L] Predicted endonuclease involved in recombination (possible cds-WP_012669218.1 CDS COG1678 699229 699792 - [K] Putative transcriptional regulator gshB CDS COG0189 699884 700828 - [HJ] Glutathione synthase/Ribosomal protein S6 modification enzyme 394 rsmE CDS COG1385 701197 701928 - [S] Uncharacterized protein conserved in bacteria endA CDS COG2356 701982 702740 - [L] Endonuclease I cds-WP_012669214.1 CDS COG3091 702817 703329 - [S] Uncharacterized protein conserved in bacteria 395 cds-WP_012669213.1 CDS COG2814 703550 704947 - [G] Arabinose efflux permease 396 metK CDS COG0192 705383 706537 - [H] S-adenosylmethionine synthetase 397 cds-WP_157861018.1 CDS NA 706950 707087 + NA 398 speA CDS COG1166 707437 709413 + [E] Arginine decarboxylase (spermidine biosynthesis) 399 cds-WP_012669209.1 CDS COG3753 709480 709941 + [S] Uncharacterized protein conserved in bacteria 400 speB CDS COG0010 710064 710987 + [E] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 401 cds-WP_012669207.1 CDS COG1280 711787 712044 + [E] Putative threonine efflux protein cds-WP_081441629.1 CDS COG1280 712096 712419 + [E] Putative threonine efflux protein 402 cds-WP_012669205.1 CDS COG4784 712502 713254 - [R] Putative Zn-dependent protease 403 tkt CDS COG0021 713540 715531 + [G] Transketolase epd CDS COG0057 715806 716852 + [G] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase pgk CDS COG0126 716874 718037 + [G] 3-phosphoglycerate kinase fbaA CDS COG0191 718120 719199 + [G] Fructose/tagatose bisphosphate aldolase 404 mscS CDS COG0668 719381 720262 + [M] Small-conductance mechanosensitive channel 405 argO CDS COG1279 720455 721075 + [R] Lysine efflux permease 406 cds-WP_012669197.1 CDS COG1044 721460 721912 + [M] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 407 cds-CPI84_RS03500 CDS COG2081 721907 722568 - [R] Predicted flavoproteins cds-WP_012669195.1 CDS COG4095 722565 722834 - [S] Uncharacterized conserved protein cds-WP_012669194.1 CDS COG0673 722841 723863 - [R] Predicted dehydrogenases and related proteins cds-WP_012669193.1 CDS COG0561 723860 724693 - [R] Predicted hydrolases of the HAD superfamily cds-WP_012669192.1 CDS COG0399 724677 725912 - [M] Predicted pyridoxal phosphate-dependent enzyme apparently involved 408 cds-CPI84_RS19950 CDS COG1279 726339 726527 + [R] Lysine efflux permease 409 cds-WP_012666458.1-3 CDS COG3335 726569 727609 - [L] Transposase and inactivated derivatives 410 cds-WP_014539423.1 CDS COG2968 727800 728537 + [S] Uncharacterized conserved protein 411 cds-WP_012669190.1 CDS COG0583 728589 729488 - [K] Transcriptional regulator 412 rpiA CDS COG0120 729693 730352 + [G] Ribose 5-phosphate isomerase 413 cds-WP_012669188.1 CDS NA 730475 730663 + NA 414 serA CDS COG0111 730750 731988 + [HE] Phosphoglycerate dehydrogenase and related dehydrogenases 415 cds-WP_012669186.1 CDS COG0212 732084 732671 - [H] 5-formyltetrahydrofolate cyclo-ligase 416 zapA CDS COG3027 733055 733384 - [S] Uncharacterized protein conserved in bacteria 417 cds-WP_012669184.1 CDS COG3079 733555 734133 + [S] Uncharacterized protein conserved in bacteria pepP CDS COG0006 734185 735501 + [E] Xaa-Pro aminopeptidase ubiH CDS COG0654 735498 736676 + [HC] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases ubiI CDS COG0654 736690 737892 + [HC] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 418 cds-WP_012669180.1 CDS ROG0283 738247 739245 + NA 419 gcvT CDS COG0404 739644 740741 + [E] Glycine cleavage system T protein (aminomethyltransferase) gcvH CDS COG0509 740765 741151 + [E] Glycine cleavage system H protein (lipoate-binding) gcvP CDS COG1003 741223 744084 + [E] Glycine cleavage system protein P (pyridoxal-binding), cds-CPI84_RS03620 CDS COG1028 744227 744355 + [IQR] Dehydrogenases with different specificities (related to 420 cds-WP_012669174.1 CDS COG1896 744449 745057 - [R] Predicted hydrolases of HD superfamily 421 cds-WP_012669173.1 CDS COG1272 745270 745929 + [R] Predicted membrane protein, hemolysin III homolog 422 ygfZ CDS COG0354 745930 746916 - [R] Predicted aminomethyltransferase related to GcvT 423 sdhE CDS COG2938 747142 747408 + [S] Uncharacterized conserved protein cds-WP_014539414.1 CDS ROG5135 747389 747802 + NA 424 fldB CDS COG0716 747926 748444 - [C] Flavodoxins cds-WP_012669168.1 CDS COG0697 748490 749443 - [GER] Permeases of the drug/metabolite transporter (DMT) 425 xerD CDS COG4974 749719 750612 + [L] Site-specific recombinase XerD dsbC CDS COG1651 750658 751362 + [O] Protein-disulfide isomerase recJ CDS COG0608 751368 753086 + [L] Single-stranded DNA-specific exonuclease 426 cds-WP_012669164.1 CDS COG1280 753102 753725 - [E] Putative threonine efflux protein 427 prfB CDS NA 753855 753929 + NA prfB_2 CDS COG1186 753931 754953 + [J] Protein chain release factor B lysS CDS COG1190 754963 756483 + [J] Lysyl-tRNA synthetase (class II) 428 cds-WP_012669161.1 CDS NA 756899 757522 - NA 429 cds-WP_012669160.1 CDS COG2814 758011 759177 + [G] Arabinose efflux permease 430 cds-WP_012669159.1 CDS COG0583 759170 760090 - [K] Transcriptional regulator 431 lysA CDS COG0019 760216 761469 + [E] Diaminopimelate decarboxylase 432 galR CDS COG1609 761552 762556 - [K] Transcriptional regulators 433 cds-WP_012669156.1 CDS COG0243 762736 765012 + [C] Anaerobic dehydrogenases, typically selenocysteine-containing 434 cds-WP_012669155.1 CDS COG3637 765285 765842 - [M] Opacity protein and related surface antigens 435 cds-CPI84_RS03730 CDS COG3210 766386 768072 - [U] Large exoproteins involved in heme utilization 436 cds-WP_041474040.1 CDS NA 768111 768266 + NA 437 cds-WP_012669149.1 CDS NA 768340 768612 - NA cds-WP_148217839.1 CDS COG4803 768599 768787 - [S] Predicted membrane protein 438 cds-WP_104945018.1 CDS COG2963 769697 769955 - [L] Transposase and inactivated derivatives cds-WP_104945018.1_2 CDS COG4413 768805 769697 - [E] Urea transporter 439 cds-WP_012669146.1 CDS NA 769982 770668 - NA 440 cds-WP_012669145.1 CDS COG3609 770768 771043 - [K] Predicted transcriptional regulators containing the CopG/Arc/MetJ xerC_5 CDS COG4974 771070 772104 - [L] Site-specific recombinase XerD cds-CPI84_RS03770 CDS COG0358 772133 775198 - [L] DNA primase (bacterial type) 441 cds-WP_012669141.1 CDS COG2932 775323 775733 + [K] Predicted transcriptional regulator 442 symE CDS NA 775808 776140 + NA 443 cds-WP_012669139.1 CDS NA 776195 776458 - NA cds-WP_012669138.1 CDS NA 776455 777312 - NA 444 cds-WP_012669136.1 CDS COG3668 777973 778272 - [R] Plasmid stabilization system protein cds-WP_012669135.1 CDS ROG3525 778269 778547 - NA xerC_6 CDS COG4974 778598 779635 - [L] Site-specific recombinase XerD cds-WP_012669133.1 CDS COG0358 779664 782729 - [L] DNA primase (bacterial type) 445 cds-WP_012669132.1 CDS COG2932 782854 783264 + [K] Predicted transcriptional regulator 446 symE_2 CDS NA 783339 783671 + NA 447 cds-WP_012669139.1-2 CDS NA 783726 783989 - NA cds-CPI84_RS03835 CDS NA 783986 784687 - NA 448 cds-WP_012669129.1 CDS NA 784758 785030 - NA cds-WP_012669128.1 CDS COG3210 785027 793162 - [U] Large exoproteins involved in heme utilization cds-WP_012669127.1 CDS COG2831 793180 794931 - [U] Hemolysin activation/secretion protein 449 cds-WP_012669126.1 CDS COG0768 795498 797213 + [M] Cell division protein FtsI/penicillin-binding protein 2 450 cds-WP_012669125.1 CDS COG0845 797498 798730 + [M] Membrane-fusion protein cds-WP_012669124.1 CDS COG0841 798727 801882 + [V] Cation/multidrug efflux pump cds-WP_012669123.1 CDS COG0841 801879 804977 + [V] Cation/multidrug efflux pump 451 cds-WP_012669122.1 CDS NA 805064 805252 + NA 452 cds-WP_012669121.1 CDS NA 805344 806378 - NA 453 cds-WP_041474039.1 CDS ROG5393 806785 808038 - NA 454 aas CDS COG0318 808299 810470 + [IQ] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II lplT CDS NA 810451 811656 + NA 455 cds-WP_012669117.1 CDS COG0667 811727 812767 - [C] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 456 cds-WP_012669116.1 CDS ROG7894 813115 813330 - NA 457 cds-WP_012669115.1 CDS COG0861 813491 814201 - [P] Membrane protein TerC, possibly involved in mutH CDS COG3066 814312 814998 - [L] DNA mismatch repair protein 458 rppH CDS COG0494 815683 816210 + [LR] NTP pyrophosphohydrolases including oxidative damage repair ptsP CDS COG3605 816223 818469 + [T] Signal transduction protein containing GAF and 459 lgt CDS COG0682 818613 819491 + [M] Prolipoprotein diacylglyceryltransferase thyA CDS COG0207 819488 820282 + [F] Thymidylate synthase 460 ddpX CDS COG2173 820260 820848 - [M] D-alanyl-D-alanine dipeptidase 461 cds-WP_012669108.1 CDS COG2165 820985 821452 + [NU] Type II secretory pathway, pseudopilin PulG cds-WP_014539382.1 CDS COG4795 821443 821994 + [U] Type II secretory pathway, component PulJ cds-WP_012669106.1 CDS NA 821994 822407 + NA cds-WP_012669105.1 CDS COG4967 822397 822729 + [NU] Tfp pilus assembly protein PilV 462 recC CDS COG1330 822801 826169 + [L] Exonuclease V gamma subunit 463 ptrA CDS COG1025 826351 829236 + [O] Secreted/periplasmic Zn-dependent peptidases, insulinase-like recB CDS COG1074 829233 832769 + [L] ATP-dependent exoDNAse (exonuclease V) beta subunit recD CDS COG0507 832766 834613 + [L] ATP-dependent exoDNAse (exonuclease V), alpha subunit 464 cds-WP_012669100.1 CDS COG3477 834782 835339 - [S] Predicted periplasmic/secreted protein 465 argA CDS COG0548 835530 836885 - [E] Acetylglutamate kinase 466 amiC CDS COG0860 837114 838361 + [M] N-acetylmuramoyl-L-alanine amidase 467 rna-CPI84_RS04000 tRNA NA 838443 838519 - NA rna-CPI84_RS04005 tRNA NA 838561 838637 - NA rna-CPI84_RS04010 tRNA NA 838714 838790 - NA 468 mltA CDS COG2821 838997 840142 + [M] Membrane-bound lytic murein transglycosylase 469 tcdA CDS COG1179 840193 840993 + [H] Dinucleotide-utilizing enzymes involved in molybdopterin and 470 csdE CDS COG2166 840990 841439 - [R] SufE protein probably involved in Fe-S csdA CDS COG0520 841441 842649 - [E] Selenocysteine lyase 471 cds-WP_012669093.1 CDS ROG7894 842881 843105 + NA 472 cds-WP_012669092.1 CDS COG0583 843456 844373 + [K] Transcriptional regulator 473 cds-WP_012669091.1 CDS COG2363 844458 844853 + [S] Uncharacterized small membrane protein rlmM CDS COG2933 844846 845946 + [R] Predicted SAM-dependent methyltransferase 474 xni CDS COG0258 846011 846763 - [L] 5'-3' exonuclease (including N-terminal domain of ppnN CDS COG1611 846794 848158 - [R] Predicted Rossmann fold nucleotide-binding protein 475 queF CDS COG2904 848304 849149 - [S] Uncharacterized protein conserved in bacteria 476 syd CDS ROG1988 849268 849834 + NA 477 cds-WP_012669085.1 CDS COG3098 850434 850757 + [S] Uncharacterized protein conserved in bacteria truC CDS COG0564 850757 851554 + [J] Pseudouridylate synthases, 23S RNA-specific cds-WP_012669083.1 CDS COG0716 851547 851996 + [C] Flavodoxins cds-WP_012669082.1 CDS COG1929 852102 853241 + [G] Glycerate kinase 478 barA CDS COG0642 853307 856036 - [T] Signal transduction histidine kinase 479 rlmD CDS COG2265 856178 857494 + [J] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase relA CDS COG0317 857527 859761 + [TK] Guanosine polyphosphate pyrophosphohydrolases/synthetases mazG CDS COG1694 859800 860576 + [R] Predicted pyrophosphatase 480 pyrG CDS COG0504 860776 862413 + [F] CTP synthase (UTP-ammonia lyase) eno CDS COG0148 862494 863789 + [G] Enolase cds-WP_012669075.1 CDS COG1835 863994 865880 + [I] Predicted acyltransferases 481 queE CDS COG0602 866039 866710 + [O] Organic radical activating enzymes 482 cds-WP_012669073.1 CDS COG0834 866884 867657 - [ET] ABC-type amino acid transport/signal transduction systems, cds-WP_012669072.1 CDS COG1126 867698 868462 - [E] ABC-type polar amino acid transport system, cds-WP_012669071.1 CDS COG0765 868455 869138 - [E] ABC-type amino acid transport system, permease 483 queD CDS COG0720 869341 869700 - [H] 6-pyruvoyl-tetrahydropterin synthase 484 cysJ CDS COG0369 869986 871788 + [P] Sulfite reductase, alpha subunit (flavoprotein) cysI CDS COG0155 871788 873503 + [P] Sulfite reductase, beta subunit (hemoprotein) cds-WP_012669067.1 CDS COG0175 873516 874247 + [EH] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase 485 cds-WP_012669066.1 CDS COG2350 874294 874578 - [S] Uncharacterized protein conserved in bacteria 486 cysG CDS COG0007 874910 876325 + [H] Uroporphyrinogen-III methylase cysD CDS COG0175 876335 877243 + [EH] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase cysN CDS COG2895 877253 878683 + [P] GTPases - Sulfate adenylate transferase subunit cysC CDS COG0529 878685 879290 + [P] Adenylylsulfate kinase and related kinases 487 cds-WP_012669061.1 CDS COG1108 879379 879702 + [P] ABC-type Mn2+/Zn2+ transport systems, permease components 488 ftsB CDS COG2919 879896 880225 + [D] Septum formation initiator ispD CDS COG1211 880218 880922 + [I] 4-diphosphocytidyl-2-methyl-D-erithritol synthase ispF CDS COG0245 880936 881409 + [I] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase truD CDS COG0585 881413 882462 + [S] Uncharacterized conserved protein 489 surE CDS COG0496 882835 883596 + [R] Predicted acid phosphatase cds-WP_012669055.1 CDS COG2518 883590 884216 + [O] Protein-L-isoaspartate carboxylmethyltransferase nlpD CDS COG0739 884366 885499 + [M] Membrane proteins related to metalloendopeptidases rpoS CDS COG0568 885550 886542 + [K] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 490 mutS CDS COG0249 886822 889383 - [L] Mismatch repair ATPase (MutS family) 491 cds-WP_104945022.1 CDS COG2963 890639 890888 - [L] Transposase and inactivated derivatives cds-WP_104945022.1_2 CDS NA 889756 890639 - NA 492 cds-WP_104945189.1 CDS NA 891020 891343 + NA 493 cds-WP_104945023.1 CDS NA 891340 892158 - NA 494 cds-CPI84_RS04275 CDS COG3157 892241 892724 + [S] Hemolysin-coregulated protein (uncharacterized) 495 cds-CPI84_RS04280 CDS ROG4140 892814 893197 - NA 496 brxL CDS COG4930 893541 895625 - [O] Predicted ATP-dependent Lon-type protease pglZ CDS ROG0323 895636 898233 - NA 497 pglX CDS COG1002 898424 902095 - [V] Type II restriction enzyme, methylase subunits brxC CDS ROG0343 902139 905783 - NA cds-WP_012669045.1 CDS ROG0690 905795 906397 - NA cds-WP_012669044.1 CDS ROG1550 906394 906996 - NA 498 cds-WP_014543468.1 CDS NA 907335 907505 + NA 499 cds-CPI84_RS04315 CDS COG2184 907502 908002 - [D] Protein involved in cell division 500 cds-WP_104945024.1 CDS COG2963 908926 909172 - [L] Transposase and inactivated derivatives cds-WP_104945024.1_2 CDS NA 908037 908926 - NA 501 cds-WP_081441628.1 CDS NA 910089 910277 + NA 502 cds-WP_012669041.1 CDS NA 910733 911380 + NA 503 cds-WP_012669039.1 CDS COG5455 911686 912126 + [S] Predicted integral membrane protein 504 mltB CDS COG2951 912418 913494 + [M] Membrane-bound lytic murein transglycosylase B 505 pncC CDS COG1546 913654 914148 + [R] Uncharacterized protein (competence- and mitomycin-induced) recA CDS COG0468 914243 915310 + [L] RecA/RadA recombinase cds-WP_012669035.1 CDS COG2137 915562 916074 + [R] Uncharacterized protein conserved in bacteria alaS CDS COG0013 916210 918840 + [J] Alanyl-tRNA synthetase 506 csrA CDS COG1551 919248 919433 + [T] Carbon storage regulator (could also regulate 507 rna-CPI84_RS04375 tRNA NA 919784 919876 + NA rna-CPI84_RS04380 tRNA NA 919881 919957 + NA rna-CPI84_RS04385 tRNA NA 920206 920282 + NA rna-CPI84_RS04390 tRNA NA 920336 920412 + NA 508 yqaB CDS COG0637 920756 921322 + [R] Predicted phosphatase/phosphohexomutase cds-WP_012669032.1 CDS COG1238 921319 921747 + [S] Predicted membrane protein gshA CDS COG2918 921820 923379 + [H] Gamma-glutamylcysteine synthetase luxS CDS COG1854 923540 924055 + [T] LuxS protein involved in autoinducer AI2 509 cds-WP_012669029.1 CDS COG4536 924118 925404 - [P] Putative Mg2+ and Co2+ transporter CorB cds-WP_012669028.1 CDS COG4137 925425 926216 - [R] ABC-type uncharacterized transport system, permease component 510 ffh CDS COG0541 926382 927743 + [U] Signal recognition particle GTPase rpsP CDS COG0228 927880 928128 + [J] Ribosomal protein S16 rimM CDS COG0806 928147 928695 + [J] RimM protein, required for 16S rRNA trmD CDS COG0336 928731 929483 + [J] tRNA-(guanine-N1)-methyltransferase rplS CDS COG0335 929540 929887 + [J] Ribosomal protein L19 511 cds-WP_157861017.1 CDS NA 930181 931146 + NA 512 cds-WP_012669023.1 CDS ROG3330 931971 934382 + NA 513 cds-WP_012669022.1 CDS COG0504 934755 935450 - [F] CTP synthase (UTP-ammonia lyase) 514 cds-WP_012669021.1 CDS COG1670 935559 936275 + [J] Acetyltransferases, including N-acetylases of ribosomal proteins 515 cds-WP_014539349.1 CDS COG0722 936723 937802 + [E] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase tyrA CDS COG1605 937809 938930 + [E] Chorismate mutase 516 cds-WP_168371105.1 CDS NA 938949 939092 - NA 517 pheA CDS COG0077 939375 940535 - [E] Prephenate dehydratase 518 pheL CDS NA 940634 940681 - NA 519 raiA CDS COG1544 940780 941118 - [J] Ribosome-associated protein Y (PSrp-1) 520 bamD CDS COG4105 941483 942214 - [R] DNA uptake lipoprotein 521 rluD CDS COG0564 942348 943325 + [J] Pseudouridylate synthases, 23S RNA-specific pgeF CDS COG1496 943325 944053 + [S] Uncharacterized conserved protein 522 clpB CDS COG0542 944179 946752 + [O] ATPases with chaperone activity, ATP-binding subunit 523 rna-CPI84_RS04520 rRNA NA 947244 948783 + NA rna-CPI84_RS04525 tRNA NA 948855 948930 + NA rna-CPI84_RS04530 rRNA NA 949153 952147 + NA rrf_2 rRNA NA 952359 952474 + NA rna-CPI84_RS04540 tRNA NA 952575 952651 + NA 524 cds-WP_012669013.1 CDS COG3021 952830 953636 + [S] Uncharacterized protein conserved in bacteria cds-WP_012669012.1 CDS COG0500 953651 954415 + [QR] SAM-dependent methyltransferases 525 mltD CDS COG1388 954472 955848 - [M] FOG: LysM repeat 526 gloB CDS COG0491 955920 956675 - [R] Zn-dependent hydrolases, including glyoxylases 527 cds-WP_012669009.1 CDS COG0500 956721 957422 + [QR] SAM-dependent methyltransferases 528 rnhA CDS COG0328 957487 957948 - [L] Ribonuclease HI 529 dnaQ CDS COG0847 958001 958759 + [L] DNA polymerase III, epsilon subunit and 530 rna-CPI84_RS04580 tRNA NA 958872 958948 + NA 531 cds-CPI84_RS04585 CDS COG1953 959011 960506 - [FH] Cytosine/uracil/thiamine/allantoin permeases 532 cds-WP_012669006.1 CDS COG1802 960651 961367 + [K] Transcriptional regulators hpxA CDS COG4126 961367 962107 + [E] Hydantoin racemase puuE CDS NA 962150 963106 + NA 533 cds-WP_012669003.1 CDS COG2189 963133 963405 - [L] Adenine specific DNA methylase Mod 534 cds-WP_014539340.1 CDS COG4127 963575 964594 + [S] Uncharacterized conserved protein 535 hpxZ CDS ROG1349 964663 965046 - NA cds-WP_012669000.1 CDS COG0154 965043 966443 - [J] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related hpxX CDS NA 966440 966628 - NA cds-WP_012668998.1 CDS COG0405 966641 968227 - [E] Gamma-glutamyltransferase 536 cds-WP_012668996.1 CDS NA 968667 969608 - NA 537 hpxU CDS COG1737 970049 970888 + [K] Transcriptional regulators 538 cds-WP_012668994.1 CDS COG0834 971150 971935 + [ET] ABC-type amino acid transport/signal transduction systems, cds-WP_012668993.1 CDS COG0765 971946 972611 + [E] ABC-type amino acid transport system, permease cds-WP_012668992.1 CDS COG0765 972611 973267 + [E] ABC-type amino acid transport system, permease cds-WP_014539337.1 CDS COG1126 973248 973985 + [E] ABC-type polar amino acid transport system, cds-WP_012668990.1 CDS COG0075 974018 975253 + [E] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase hpxK CDS NA 975253 976512 + NA uraD CDS COG3195 976509 977003 + [S] Uncharacterized protein conserved in bacteria uraH CDS COG2351 977000 977335 + [R] Transthyretin-like protein cds-WP_012668986.1 CDS COG2233 977368 978693 + [F] Xanthine/uracil permeases 539 cds-WP_041474033.1 CDS COG0388 978677 979450 - [R] Predicted amidohydrolase cds-WP_012668984.1 CDS COG0436 979438 980598 - [E] Aspartate/tyrosine/aromatic aminotransferase 540 cds-WP_012668983.1 CDS COG2161 981020 981262 + [D] Antitoxin of toxin-antitoxin stability system cds-WP_012668982.1 CDS COG2026 981267 981554 + [JD] Cytotoxic translational repressor of toxin-antitoxin stability 541 cds-WP_012668980.1 CDS COG0235 982003 982617 + [G] Ribulose-5-phosphate 4-epimerase and related epimerases and mtnC CDS COG4229 982614 983303 + [C] Predicted enolase-phosphatase cds-WP_012668978.1 CDS COG1791 983300 983842 + [S] Uncharacterized conserved protein, contains double-stranded beta-helix 542 mtnA CDS COG0182 983894 984925 - [J] Predicted translation initiation factor 2B subunit, 543 mtnK CDS COG4857 985040 986239 + [R] Predicted kinase 544 fadE CDS COG1960 986273 988717 - [I] Acyl-CoA dehydrogenases 545 lpcA CDS COG0279 988925 989503 + [G] Phosphoheptose isomerase 546 cds-WP_012668973.1 CDS COG0121 989739 990506 + [R] Predicted glutamine amidotransferase 547 cds-WP_012668972.1 CDS COG3034 990477 991208 - [S] Uncharacterized protein conserved in bacteria 548 dinB CDS COG0389 991422 992477 + [L] Nucleotidyltransferase/DNA polymerase involved in DNA repair 549 pepD CDS COG2195 992514 993971 - [E] Di- and tripeptidases 550 gpt CDS COG2236 994232 994690 + [R] Predicted phosphoribosyltransferases 551 frsA CDS COG0140 994807 996054 + [E] Phosphoribosyl-ATP pyrophosphohydrolase crl CDS NA 996111 996512 + NA 552 cds-WP_012668966.1 CDS COG3203 996622 997773 - [M] Outer membrane protein (porin) 553 proB CDS COG0263 998073 999176 + [E] Glutamate 5-kinase proA CDS COG0014 999186 1000439 + [E] Gamma-glutamyl phosphate reductase cds-WP_104945028.1 CDS COG1280 1000458 1001129 + [E] Putative threonine efflux protein 554 cds-WP_012668962.1 CDS COG1487 1001143 1001568 - [R] Predicted nucleic acid-binding protein, contains PIN cds-WP_012668961.1 CDS ROG1540 1001568 1001819 - NA 555 cds-WP_012668960.1 CDS COG2832 1001954 1002388 - [S] Uncharacterized protein conserved in bacteria 556 crcB CDS COG0239 1002630 1003007 + [D] Integral membrane protein possibly involved in 557 cds-WP_012668958.1 CDS NA 1002993 1003775 - NA cds-WP_012668957.1 CDS NA 1003777 1003974 - NA 558 iraP CDS NA 1004279 1004572 + NA 559 cds-WP_041474032.1 CDS NA 1004569 1004760 - NA 560 cds-CPI84_RS04845 CDS COG3963 1005007 1005568 + [I] Phospholipid N-methyltransferase 561 cds-WP_012668953.1 CDS NA 1005644 1005874 + NA 562 cds-WP_014543556.1 CDS COG3274 1005950 1006966 - [S] Uncharacterized protein conserved in bacteria 563 cds-WP_012668951.1 CDS NA 1007060 1007326 - NA 564 cds-WP_012668950.1 CDS NA 1007917 1008111 + NA 565 cds-WP_012668949.1 CDS COG0747 1008162 1009739 - [E] ABC-type dipeptide transport system, periplasmic component cds-WP_012668948.1 CDS COG1124 1009948 1010613 - [EP] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component cds-WP_012668947.1 CDS COG1123 1010606 1011454 - [R] ATPase components of various ABC-type transport cds-WP_012668946.1 CDS COG1173 1011444 1012295 - [EP] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components cds-WP_012668945.1 CDS COG0601 1012292 1013347 - [EP] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components cds-WP_012668944.1 CDS COG0747 1013347 1014915 - [E] ABC-type dipeptide transport system, periplasmic component 566 cds-WP_012668943.1 CDS COG1266 1015006 1015710 - [R] Predicted metal-dependent membrane protease 567 cds-WP_012668942.1 CDS ROG1065 1015891 1016187 + NA 568 cds-WP_012668941.1 CDS NA 1016292 1016537 - NA 569 cspA CDS COG1278 1017092 1017304 + [K] Cold shock proteins 570 cds-CPI84_RS04920 CDS COG3250 1017439 1020487 - [G] Beta-galactosidase/beta-glucuronidase 571 cds-WP_012668939.1 CDS ROG1291 1021159 1021464 + NA 572 lpxO CDS COG3555 1021639 1022550 + [O] Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases 573 proC CDS COG0345 1022586 1023398 - [E] Pyrroline-5-carboxylate reductase 574 cds-WP_004156173.1 CDS COG1671 1023628 1024077 + [S] Uncharacterized protein conserved in bacteria 575 cds-WP_012668936.1 CDS COG3416 1024119 1024811 - [S] Uncharacterized protein conserved in bacteria 576 aroL CDS COG0703 1025117 1025641 + [E] Shikimate kinase 577 cds-WP_012668934.1 CDS NA 1025785 1025976 + NA 578 cds-WP_157861016.1 CDS COG0501 1026676 1026816 + [O] Zn-dependent protease with chaperone function cds-WP_012668933.1 CDS NA 1026813 1027118 + NA cds-CPI84_RS19830 CDS ROG4371 1027152 1027636 + NA 579 ppnP CDS COG3123 1027717 1028007 + [S] Uncharacterized protein conserved in bacteria 580 rdgC CDS COG2974 1028109 1029020 - [L] DNA recombination-dependent growth factor C 581 eat CDS COG0531 1029192 1030556 - [E] Amino acid transporters 582 cds-WP_012668928.1 CDS COG2334 1030780 1031784 + [R] Putative homoserine kinase type II (protein 583 cds-WP_014543580.1 CDS COG2207 1031939 1033006 + [K] AraC-type DNA-binding domain-containing proteins 584 cds-WP_014539305.1 CDS NA 1033304 1033801 - NA 585 cds-WP_041474030.1 CDS COG2207 1034245 1034676 + [K] AraC-type DNA-binding domain-containing proteins 586 cds-WP_071819824.1 CDS COG3064 1034678 1034923 - [M] Membrane protein involved in colicin uptake 587 cds-WP_012668924.1 CDS COG1462 1035316 1035990 + [M] Uncharacterized protein involved in formation of cds-WP_012668923.1 CDS COG4259 1036007 1036357 + [S] Uncharacterized protein conserved in bacteria cds-WP_012668922.1 CDS COG4380 1036357 1037007 + [S] Uncharacterized protein conserved in bacteria 588 cds-WP_012668921.1 CDS COG0419 1037057 1040416 - [L] ATPase involved in DNA repair sbcD CDS COG0420 1040413 1041636 - [L] DNA repair exonuclease 589 phoB CDS COG0745 1041812 1042501 + [TK] Response regulators consisting of a CheY-like phoR CDS COG0642 1042524 1043858 + [T] Signal transduction histidine kinase cds-WP_012668917.1 CDS COG0226 1043855 1044778 + [P] ABC-type phosphate transport system, periplasmic component 590 cds-WP_012668916.1 CDS COG0620 1045048 1046148 + [E] Methionine synthase II (cobalamin-independent) 591 brnQ CDS COG1114 1046652 1047971 + [E] Branched-chain amino acid permeases proY CDS COG1113 1048027 1049379 + [E] Gamma-aminobutyrate permease and related permeases 592 cds-WP_004156242.1 CDS COG0450 1049626 1050228 - [O] Peroxiredoxin 593 cds-WP_012668913.1 CDS COG3124 1050425 1051006 - [S] Uncharacterized protein conserved in bacteria 594 queA CDS COG0809 1051110 1052180 + [J] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) tgt CDS COG0343 1052252 1053382 + [J] Queuine/archaeosine tRNA-ribosyltransferase yajC CDS COG1862 1053400 1053729 + [U] Preprotein translocase subunit YajC secD CDS COG0342 1053756 1055603 + [U] Preprotein translocase subunit SecD secF CDS COG0341 1055614 1056582 + [U] Preprotein translocase subunit SecF 595 cds-CPI84_RS05105 CDS COG5633 1056627 1057189 - [R] Predicted periplasmic lipoprotein lysM CDS COG1652 1057228 1057671 - [S] Uncharacterized protein containing LysM domain 596 nrdR CDS COG1327 1057842 1058291 + [K] Predicted transcriptional regulator, consists of a ribD CDS COG1985 1058296 1059399 + [H] Pyrimidine reductase, riboflavin biosynthesis ribE CDS COG0054 1059486 1059956 + [H] Riboflavin synthase beta-chain nusB CDS COG0781 1059972 1060391 + [K] Transcription termination factor thiL CDS COG0611 1060441 1061418 + [H] Thiamine monophosphate kinase pgpA CDS COG1267 1061405 1061902 + [I] Phosphatidylglycerophosphatase A and related proteins 597 dxs CDS COG1154 1061949 1063814 - [HI] Deoxyxylulose-5-phosphate synthase ispA CDS COG0142 1063833 1064732 - [H] Geranylgeranyl pyrophosphate synthase xseB CDS COG1722 1064732 1064974 - [L] Exonuclease VII small subunit 598 thiI CDS COG0301 1065226 1066674 + [H] Thiamine biosynthesis ATP pyrophosphatase 599 yajL CDS COG0693 1066737 1067333 - [R] Putative intracellular protease/amidase panE CDS COG1893 1067287 1068207 - [H] Ketopantoate reductase 600 cds-WP_012668896.1 CDS COG1666 1068349 1068840 + [S] Uncharacterized protein conserved in bacteria 601 cds-CPI84_RS05180 CDS COG3328 1069246 1070454 + [L] Transposase and inactivated derivatives 602 cds-WP_012668893.1 CDS ROG2133 1070780 1074592 + NA 603 cds-WP_012668892.1 CDS COG2801 1074643 1075683 - [L] Transposase and inactivated derivatives 604 cds-CPI84_RS05195 CDS ROG6591 1075789 1076141 - NA 605 cds-WP_012668891.1 CDS COG0477 1076322 1077683 - [GEPR] Permeases of the major facilitator superfamily 606 cyoE CDS COG0109 1077814 1078701 - [O] Polyprenyltransferase (cytochrome oxidase assembly factor) cds-WP_012668889.1 CDS COG3125 1078715 1079044 - [C] Heme/copper-type cytochrome/quinol oxidase, subunit 4 cds-WP_012668888.1 CDS COG1845 1079044 1079658 - [C] Heme/copper-type cytochrome/quinol oxidase, subunit 3 cyoB CDS COG0843 1079648 1081639 - [C] Heme/copper-type cytochrome/quinol oxidases, subunit 1 cyoA CDS COG1622 1081644 1082582 - [C] Heme/copper-type cytochrome/quinol oxidases, subunit 2 607 ampG CDS NA 1083107 1084594 - NA cds-WP_012668883.1 CDS COG3056 1084639 1085217 - [M] Uncharacterized lipoprotein 608 bolA CDS COG0271 1085484 1085798 + [T] Stress-induced morphogen (activity unknown) 609 tig CDS COG0544 1086147 1087451 + [O] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) clpP CDS COG0740 1087786 1088409 + [OU] Protease subunit of ATP-dependent Clp proteases clpX CDS COG1219 1088505 1089779 + [O] ATP-dependent protease Clp, ATPase subunit 610 cds-WP_012668878.1 CDS COG0740 1089852 1090448 - [OU] Protease subunit of ATP-dependent Clp proteases 611 clpX_2 CDS COG1219 1090761 1092035 + [O] ATP-dependent protease Clp, ATPase subunit lon CDS COG0466 1092225 1094579 + [O] ATP-dependent Lon protease, bacterial type cds-WP_012668875.1 CDS COG0776 1094771 1095043 + [L] Bacterial nucleoid DNA-binding protein 612 ppiD CDS COG0760 1095264 1097135 + [O] Parvulin-like peptidyl-prolyl isomerase 613 cds-WP_014539275.1 CDS COG1555 1097276 1097608 + [L] DNA uptake protein and related DNA-binding 614 cds-WP_157861015.1 CDS COG0824 1097708 1098118 + [R] Predicted thioesterase 615 queC CDS COG0603 1098139 1098834 - [R] Predicted PP-loop superfamily ATPase 616 cds-WP_014539273.1 CDS COG0697 1098913 1099848 - [GER] Permeases of the drug/metabolite transporter (DMT) 617 cds-WP_012668869.1 CDS COG1522 1099944 1100417 + [K] Transcriptional regulators cds-WP_012668868.1 CDS COG1132 1100464 1102233 + [V] ABC-type multidrug transport system, ATPase and cds-WP_012668867.1 CDS COG1132 1102226 1103980 + [V] ABC-type multidrug transport system, ATPase and 618 glnK CDS COG0347 1104259 1104597 + [E] Nitrogen regulatory protein PII amtB CDS COG0004 1104620 1105921 + [P] Ammonia permease 619 tesB CDS COG1946 1105996 1106856 - [I] Acyl-CoA thioesterase 620 cds-WP_012668863.1 CDS COG3126 1107079 1107636 + [S] Uncharacterized protein conserved in bacteria 621 cds-WP_012668862.1 CDS COG3695 1107659 1107976 - [L] Predicted methylated DNA-protein cysteine methyltransferase 622 hha CDS COG5159 1108275 1108493 - [O] 26S proteasome regulatory complex component tomB CDS NA 1108523 1108903 - NA 623 cds-WP_012668860.1 CDS NA 1109050 1109403 - NA 624 ykgO CDS COG0257 1109860 1110006 - [J] Ribosomal protein L36 cds-WP_012668858.1 CDS COG0254 1110017 1110277 - [J] Ribosomal protein L31 625 cds-WP_012668857.1 CDS COG0841 1110432 1113572 - [V] Cation/multidrug efflux pump cds-WP_012668856.1 CDS COG0845 1113589 1114782 - [M] Membrane-fusion protein 626 acrR CDS COG1309 1114924 1115562 + [K] Transcriptional regulator 627 rsmS CDS NA 1115570 1115719 - NA cds-WP_012668853.1 CDS ROG2754 1115758 1116003 - NA 628 cds-WP_012668852.1 CDS COG3923 1116284 1116820 - [L] Primosomal replication protein N'' 629 cds-WP_012668851.1 CDS COG2832 1116887 1117264 + [S] Uncharacterized protein conserved in bacteria 630 apt CDS COG0503 1117419 1117970 + [F] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 631 dnaX CDS COG2812 1118199 1120130 + [L] DNA polymerase III, gamma/tau subunits cds-WP_004156376.1 CDS COG0718 1120186 1120515 + [S] Uncharacterized protein conserved in bacteria recR CDS COG0353 1120515 1121120 + [L] Recombinational DNA repair protein (RecF pathway) htpG CDS COG0326 1121226 1123094 + [O] Molecular chaperone, HSP90 family 632 cds-WP_012668846.1 CDS NA 1123429 1123734 + NA cds-WP_012668845.1 CDS COG0455 1123731 1125035 + [D] ATPases involved in chromosome partitioning cds-WP_104945191.1 CDS ROG8413 1125046 1126467 + NA 633 cds-WP_012668843.1 CDS COG0583 1126582 1127457 - [K] Transcriptional regulator 634 cds-WP_041474028.1 CDS NA 1127663 1128367 + NA cds-WP_012668841.1 CDS COG0494 1128420 1128818 + [LR] NTP pyrophosphohydrolases including oxidative damage repair cds-WP_012668840.1 CDS NA 1128818 1129693 + NA cds-WP_012668839.1 CDS COG0697 1129690 1130592 + [GER] Permeases of the drug/metabolite transporter (DMT) 635 adk CDS COG0563 1130686 1131330 + [F] Adenylate kinase and related kinases 636 hemH CDS COG0276 1131448 1132407 + [H] Protoheme ferro-lyase (ferrochelatase) cds-WP_012668836.1 CDS COG0524 1132497 1133801 + [G] Sugar kinases, ribokinase family 637 cds-WP_012668835.1 CDS NA 1134029 1134571 + NA 638 cds-WP_012668834.1 CDS COG4651 1134766 1136451 - [P] Kef-type K+ transport system, predicted NAD-binding 639 cds-WP_012668833.1 CDS COG0368 1136740 1137939 - [H] Cobalamin-5-phosphate synthase 640 ushA CDS COG0737 1138107 1139810 + [F] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 641 cds-WP_012668831.1 CDS COG4125 1139932 1140381 - [S] Predicted membrane protein 642 cds-WP_012668830.1 CDS COG0583 1140471 1141337 + [K] Transcriptional regulator 643 ybaK CDS COG2606 1141396 1141878 - [S] Uncharacterized conserved protein cds-WP_012668828.1 CDS COG3735 1142058 1142861 - [S] Uncharacterized protein conserved in bacteria 644 copA CDS COG2217 1142941 1145448 - [P] Cation transport ATPase 645 cueR CDS COG0789 1145544 1145954 + [K] Predicted transcriptional regulators 646 cds-WP_012668825.1 CDS COG1585 1145951 1146403 - [OU] Membrane protein implicated in regulation of cds-WP_004156457.1 CDS COG0330 1146403 1147317 - [O] Membrane protease subunits, stomatin/prohibitin homologs 647 cds-WP_012668824.1 CDS COG3118 1147449 1148306 - [O] Thioredoxin domain-containing protein 648 cds-WP_012668823.1 CDS COG0300 1148376 1149149 - [R] Short-chain dehydrogenases of various substrate specificities 649 tesA CDS COG2755 1149257 1149907 - [E] Lysophospholipase L1 and related esterases 650 cds-WP_012668821.1 CDS COG4181 1149878 1150564 + [Q] Predicted ABC-type transport system involved in cds-WP_012668820.1 CDS COG3127 1150561 1152978 + [Q] Predicted ABC-type transport system involved in 651 purK CDS COG0026 1153041 1154108 - [F] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) purE CDS COG0041 1154105 1154614 - [F] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 652 lpxH CDS COG2908 1154753 1155469 - [S] Uncharacterized protein conserved in bacteria ppiB CDS COG0652 1155469 1155963 - [O] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin 653 cysS CDS COG0215 1156203 1157591 + [J] Cysteinyl-tRNA synthetase 654 adhP CDS COG1064 1157673 1158689 - [R] Zn-dependent alcohol dehydrogenases 655 ybcJ CDS COG2501 1158884 1159096 - [S] Uncharacterized conserved protein folD CDS COG0190 1159096 1159962 - [H] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 656 rna-CPI84_RS05620 tRNA NA 1160143 1160219 + NA 657 cds-CPI84_RS05625 CDS COG0582 1160235 1160912 - [L] Integrase 658 cds-CPI84_RS05630 CDS COG0582 1160922 1161188 + [L] Integrase 659 cds-WP_012668810.1 CDS NA 1161433 1161750 - NA cds-WP_041474025.1 CDS NA 1161747 1162202 - NA 660 cds-WP_012668808.1 CDS NA 1162365 1162739 - NA 661 hxsD CDS NA 1163123 1163395 + NA 662 cds-WP_104945030.1 CDS COG2963 1163606 1163855 + [L] Transposase and inactivated derivatives cds-WP_104945030.1_2 CDS NA 1163855 1164774 + NA hxsC CDS COG0535 1164768 1165829 + [R] Predicted Fe-S oxidoreductases cds-CPI84_RS05670 CDS NA 1165826 1166170 + NA 663 cds-WP_104944977.1-4 CDS COG2963 1166233 1166491 + [L] Transposase and inactivated derivatives cds-WP_104944977.1-4_2 CDS COG4413 1166491 1167383 + [E] Urea transporter cds-CPI84_RS05680 CDS COG3409 1167413 1167709 + [M] Putative peptidoglycan-binding domain-containing protein cds-WP_012668805.1 CDS ROG3354 1167729 1169339 + NA 664 cds-CPI84_RS05695 CDS ROG6591 1169586 1170073 + NA 665 cds-WP_041474022.1 CDS NA 1170568 1170873 - NA 666 cds-WP_222838325.1 CDS ROG1742 1171112 1171273 + NA 667 cds-WP_012668803.1 CDS ROG1335 1171503 1171799 + NA 668 rna-CPI84_RS05715 tRNA NA 1171829 1171902 - NA 669 cds-WP_012668801.1 CDS COG1764 1172823 1173254 + [O] Predicted redox protein, regulator of disulfide 670 cds-WP_012668800.1 CDS COG5455 1173425 1173856 + [S] Predicted integral membrane protein 671 cds-WP_012668799.1 CDS ROG3733 1174115 1174471 + NA 672 cds-WP_012668798.1 CDS COG2040 1174604 1175506 + [E] Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) cds-WP_012668797.1 CDS COG0747 1175559 1177103 + [E] ABC-type dipeptide transport system, periplasmic component cds-WP_012668796.1 CDS COG0601 1177110 1178099 + [EP] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components cds-WP_012668795.1 CDS COG1173 1178169 1178978 + [EP] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components cds-WP_012668794.1 CDS COG1123 1178981 1180567 + [R] ATPase components of various ABC-type transport 673 cds-WP_012668793.1 CDS COG4886 1181002 1182471 - [S] Leucine-rich repeat (LRR) protein 674 cds-WP_041474021.1 CDS NA 1182735 1183109 - NA 675 cds-CPI84_RS05785 CDS COG1629 1183662 1185691 + [P] Outer membrane receptor proteins, mostly Fe 676 cds-WP_012668791.1 CDS COG4993 1185858 1188239 + [G] Glucose dehydrogenase 677 cds-WP_012668790.1 CDS ROG6291 1188286 1188753 - NA 678 arnB CDS COG0399 1189323 1190462 + [M] Predicted pyridoxal phosphate-dependent enzyme apparently involved arnC CDS COG0463 1190464 1191441 + [M] Glycosyltransferases involved in cell wall biogenesis arnA CDS COG0223 1191438 1193417 + [J] Methionyl-tRNA formyltransferase cds-WP_012668786.1 CDS COG0726 1193417 1194307 + [G] Predicted xylanase/chitin deacetylase arnT CDS COG1807 1194318 1195979 + [M] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of cds-CPI84_RS05825 CDS NA 1195976 1196089 + NA cds-WP_012668784.1 CDS NA 1196115 1196498 + NA 679 cds-WP_004169116.1 CDS ROG5738 1196637 1196891 - NA 680 cydB CDS COG1294 1197083 1198090 - [C] Cytochrome bd-type quinol oxidase, subunit 2 cds-WP_012668782.1 CDS COG1271 1198092 1199516 - [C] Cytochrome bd-type quinol oxidase, subunit 1 681 cds-WP_014539230.1 CDS COG0583 1200467 1201372 - [K] Transcriptional regulator 682 cds-WP_012668780.1 CDS COG0604 1201546 1202559 + [CR] NADPH:quinone reductase and related Zn-dependent oxidoreductases 683 cds-WP_012668779.1 CDS NA 1203030 1204118 + NA 684 cds-WP_162013508.1 CDS NA 1204137 1204301 - NA cds-WP_012668778.1 CDS NA 1204316 1204561 - NA 685 cds-WP_012668777.1 CDS COG1349 1204731 1205492 - [KG] Transcriptional regulators of sugar metabolism 686 cds-WP_012668776.1 CDS COG2084 1205795 1206709 + [I] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases cds-WP_012668775.1 CDS COG3395 1206709 1207971 + [S] Uncharacterized protein conserved in bacteria cds-WP_012668774.1 CDS COG0235 1207968 1208591 + [G] Ribulose-5-phosphate 4-epimerase and related epimerases and cds-WP_012668773.1 CDS COG3622 1208594 1209370 + [G] Hydroxypyruvate isomerase cds-WP_012668772.1 CDS COG2610 1209520 1210869 + [GE] H+/gluconate symporter and related permeases 687 pagP CDS ROG4459 1211916 1212473 + NA 688 cspE CDS COG1278 1212624 1212833 + [K] Cold shock proteins 689 cds-WP_012668770.1 CDS COG0388 1213245 1214036 + [R] Predicted amidohydrolase 690 tatE CDS COG1826 1214142 1214345 + [U] Sec-independent protein secretion pathway components 691 lipA CDS COG0320 1214405 1215370 - [H] Lipoate synthase lipB CDS COG0321 1215567 1216220 - [H] Lipoate-protein ligase B ybeD CDS COG2921 1216301 1216564 - [S] Uncharacterized conserved protein dacA CDS COG1686 1216732 1217946 - [M] D-alanyl-D-alanine carboxypeptidase rlpA CDS COG0797 1218046 1219170 - [M] Lipoproteins mrdB CDS COG0772 1219182 1220294 - [D] Bacterial cell division membrane protein mrdA CDS COG0768 1220301 1222205 - [M] Cell division protein FtsI/penicillin-binding protein 2 rlmH CDS COG1576 1222240 1222710 - [S] Uncharacterized conserved protein rsfS CDS COG0799 1222714 1223031 - [S] Uncharacterized homolog of plant Iojap protein nadD CDS COG1057 1223143 1223823 - [H] Nicotinic acid mononucleotide adenylyltransferase holA CDS COG1466 1223816 1224847 - [L] DNA polymerase III, delta subunit lptE CDS COG2980 1224844 1225443 - [M] Rare lipoprotein B leuS CDS COG0495 1225458 1228040 - [J] Leucyl-tRNA synthetase 692 cds-WP_014539220.1 CDS ROG1153 1228218 1228739 + NA 693 cds-WP_012668754.1 CDS COG1126 1228907 1229632 - [E] ABC-type polar amino acid transport system, gltK CDS COG0765 1229633 1230310 - [E] ABC-type amino acid transport system, permease cds-WP_012668752.1 CDS COG0765 1230310 1231047 - [E] ABC-type amino acid transport system, permease cds-WP_012668751.1 CDS COG0834 1231342 1232271 - [ET] ABC-type amino acid transport/signal transduction systems, 694 lnt CDS COG0815 1232717 1234252 - [M] Apolipoprotein N-acyltransferase corC CDS COG4535 1234261 1235139 - [P] Putative Mg2+ and Co2+ transporter CorC ybeY CDS COG0319 1235282 1235749 - [R] Predicted metal-dependent hydrolase cds-WP_041474020.1 CDS COG1702 1235746 1236795 - [T] Phosphate starvation-inducible protein PhoH, predicted ATPase 695 miaB CDS COG0621 1237052 1238476 - [J] 2-methylthioadenine synthetase 696 ubiF CDS COG0654 1238667 1239845 + [HC] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 697 rna-CPI84_RS06045 tRNA NA 1239947 1240021 - NA rna-CPI84_RS06050 tRNA NA 1240089 1240163 - NA rna-CPI84_RS06055 tRNA NA 1240171 1240247 - NA rna-CPI84_RS06060 tRNA NA 1240284 1240358 - NA rna-CPI84_RS06065 tRNA NA 1240378 1240462 - NA rna-CPI84_RS06070 tRNA NA 1240476 1240552 - NA 698 asnB CDS COG0367 1240771 1242435 - [E] Asparagine synthase (glutamine-hydrolyzing) 699 cds-WP_012668743.1 CDS COG0647 1242700 1243452 - [G] Predicted sugar phosphatases of the HAD cds-WP_012668742.1 CDS COG1940 1243457 1244695 - [KG] Transcriptional regulator/sugar kinase nagA CDS COG1820 1244703 1245851 - [G] N-acetylglucosamine-6-phosphate deacetylase nagB CDS COG0363 1245947 1246747 - [G] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 700 nagE CDS COG1263 1247082 1249010 + [G] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 701 glnS CDS COG0008 1249365 1251032 + [J] Glutamyl- and glutaminyl-tRNA synthetases 702 cds-WP_012668737.1 CDS COG4460 1251149 1251538 + [S] Uncharacterized protein conserved in bacteria 703 mtr CDS COG0814 1251654 1252898 + [E] Amino acid permeases 704 fur CDS COG0735 1253016 1253459 - [P] Fe2+/Zn2+ uptake regulation proteins 705 fldA CDS COG0716 1253854 1254384 - [C] Flavodoxins 706 ybfE CDS ROG2075 1254525 1254806 - NA 707 ybfF CDS COG0596 1254954 1255718 - [R] Predicted hydrolases or acyltransferases (alpha/beta hydrolase 708 seqA CDS COG3057 1255983 1256501 + [L] Negative regulator of replication initiationR pgm CDS COG0033 1256526 1258166 + [G] Phosphoglucomutase 709 kdpE CDS COG0745 1258216 1258896 - [TK] Response regulators consisting of a CheY-like 710 cds-WP_012668728.1 CDS NA 1259195 1259395 + NA 711 cds-WP_012668727.1 CDS COG3272 1259533 1260489 + [S] Uncharacterized conserved protein phrB CDS COG0415 1260504 1261937 + [L] Deoxyribodipyrimidine photolyase cds-WP_012668725.1 CDS COG0327 1261940 1262680 + [S] Uncharacterized conserved protein pxpB CDS COG2049 1262801 1263457 + [E] Allophanate hydrolase subunit 1 cds-WP_012668723.1 CDS COG1984 1263451 1264389 + [E] Allophanate hydrolase subunit 2 pxpA CDS COG1540 1264373 1265110 + [R] Uncharacterized proteins, homologs of lactam utilization cds-WP_012668721.1 CDS COG3819 1265167 1265895 + [S] Predicted membrane protein cds-WP_012668720.1 CDS COG3817 1265897 1266886 + [S] Predicted membrane protein pcp CDS COG2039 1266894 1267535 + [O] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) nei CDS COG0266 1267553 1268347 + [L] Formamidopyrimidine-DNA glycosylase 712 cds-WP_012668717.1 CDS COG0372 1268402 1269682 - [C] Citrate synthase 713 sdhC CDS COG2009 1270311 1270700 + [C] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit sdhD CDS COG2142 1270694 1271041 + [C] Succinate dehydrogenase, hydrophobic anchor subunit sdhA CDS COG1053 1271041 1272807 + [C] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit cds-WP_012668713.1 CDS COG0479 1272825 1273541 + [C] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit sucA CDS COG0567 1273773 1276580 + [C] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, odhB CDS COG0508 1276594 1277811 + [C] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) sucC CDS COG0045 1277907 1279073 + [C] Succinyl-CoA synthetase, beta subunit sucD CDS COG0074 1279073 1279945 + [C] Succinyl-CoA synthetase, alpha subunit 714 ybgC CDS COG0824 1280222 1280626 + [R] Predicted thioesterase tolQ CDS COG0811 1280632 1281309 + [U] Biopolymer transport proteins tolR CDS COG0848 1281323 1281751 + [U] Biopolymer transport protein tolA CDS COG3064 1281781 1283103 + [M] Membrane protein involved in colicin uptake tolB CDS COG0823 1283218 1284510 + [U] Periplasmic component of the Tol biopolymer pal CDS COG2885 1284555 1285073 + [M] Outer membrane protein and related peptidoglycan-associated cpoB CDS COG1729 1285083 1285880 + [S] Uncharacterized protein conserved in bacteria 715 rna-CPI84_RS06295 tRNA NA 1286044 1286119 + NA rna-CPI84_RS06305 tRNA NA 1286278 1286353 + NA rna-CPI84_RS06315 tRNA NA 1286511 1286586 + NA rna-CPI84_RS06325 tRNA NA 1286745 1286820 + NA 716 cds-WP_012668702.1 CDS COG0350 1287889 1288392 + [L] Methylated DNA-protein cysteine methyltransferase 717 nadA CDS COG0379 1288552 1289613 + [H] Quinolinate synthase pnuC CDS COG3201 1289642 1290343 + [H] Nicotinamide mononucleotide transporter 718 zitB CDS COG1230 1290424 1291353 - [P] Co/Zn/Cd efflux system component 719 cds-WP_014539201.1 CDS NA 1291603 1291935 - NA 720 aroG CDS COG0722 1292214 1293266 + [E] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 721 cds-WP_104945035.1 CDS COG3209 1293990 1299083 + [M] Rhs family protein cds-WP_104945036.1 CDS COG3209 1299225 1304315 + [M] Rhs family protein 722 gpmA CDS COG0588 1304440 1305192 - [G] Phosphoglycerate mutase 1 galM CDS COG2017 1305346 1306380 - [G] Galactose mutarotase and related enzymes galK CDS COG0153 1306374 1307522 - [G] Galactokinase galT CDS COG1085 1307519 1308571 - [C] Galactose-1-phosphate uridylyltransferase 723 modF CDS COG1119 1308826 1310295 - [P] ABC-type molybdenum transport system, ATPase component/photorepair 724 cds-WP_014539198.1 CDS NA 1310629 1311690 + NA 725 cds-WP_012668688.1 CDS COG3328 1311843 1313051 - [L] Transposase and inactivated derivatives cds-WP_041474018.1 CDS COG1119 1313108 1313545 - [P] ABC-type molybdenum transport system, ATPase component/photorepair 726 cds-WP_041474017.1 CDS NA 1313879 1314238 + NA 727 modE CDS COG2005 1314793 1315572 - [R] N-terminal domain of molybdenum-binding protein 728 cds-WP_012668686.1 CDS NA 1315724 1315888 + NA 729 modA CDS COG0725 1316043 1316816 + [P] ABC-type molybdate transport system, periplasmic component modB CDS COG4149 1316813 1317502 + [P] ABC-type molybdate transport system, permease component modC CDS COG4148 1317502 1318560 + [P] ABC-type molybdate transport system, ATPase component 730 cds-WP_012668682.1 CDS COG0561 1318591 1319409 - [R] Predicted hydrolases of the HAD superfamily 731 pgl CDS COG2706 1319547 1320539 + [G] 3-carboxymuconate cyclase 732 cds-WP_012668680.1 CDS COG1881 1320611 1321087 - [R] Phospholipid-binding protein cds-WP_012668679.1 CDS COG2130 1321128 1322183 - [R] Putative NADP-dependent oxidoreductases 733 bioA CDS COG0161 1322267 1323553 - [H] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 734 bioB CDS COG0502 1323642 1324673 + [H] Biotin synthase and related enzymes bioF CDS COG0156 1324673 1325827 + [H] 7-keto-8-aminopelargonate synthetase and related enzymes bioC CDS COG0500 1325808 1326566 + [QR] SAM-dependent methyltransferases bioD CDS COG0132 1326559 1327227 + [H] Dethiobiotin synthetase 735 cds-WP_012668673.1 CDS COG0410 1327280 1327996 - [E] ABC-type branched-chain amino acid transport systems, 736 uvrB CDS COG0556 1328925 1330949 + [L] Helicase subunit of the DNA excision 737 yvcK CDS COG0391 1330992 1331900 - [S] Uncharacterized conserved protein 738 moaA CDS COG2896 1332191 1333177 + [H] Molybdenum cofactor biosynthesis enzyme moaB CDS COG0521 1333193 1333708 + [H] Molybdopterin biosynthesis enzymes moaC CDS COG0315 1333710 1334195 + [H] Molybdenum cofactor biosynthesis enzyme moaD CDS COG1977 1334188 1334433 + [H] Molybdopterin converting factor, small subunit moaE CDS COG0314 1334435 1334896 + [H] Molybdopterin converting factor, large subunit cds-WP_012668664.1 CDS ROG1186 1334893 1335981 + NA 739 cds-WP_012668663.1 CDS COG0670 1336525 1337235 + [R] Integral membrane protein, interacts with FtsH 740 cds-WP_012668662.1 CDS NA 1337742 1338131 + NA 741 rhlE CDS COG0513 1338416 1339831 + [LKJ] Superfamily II DNA and RNA helicases dusC CDS COG0042 1339885 1340817 + [J] tRNA-dihydrouridine synthase 742 cds-WP_012668659.1 CDS COG1376 1340867 1341955 - [S] Uncharacterized protein conserved in bacteria 743 cds-CPI84_RS06565 CDS COG3387 1342127 1342923 - [G] Glucoamylase and related glycosyl hydrolases 744 cds-WP_012668657.1 CDS COG0586 1343025 1343591 - [S] Uncharacterized membrane-associated protein 745 cds-WP_012668656.1 CDS ROG0339 1343808 1344395 + NA 746 pbpG CDS COG1686 1344567 1345517 + [M] D-alanyl-D-alanine carboxypeptidase 747 cds-WP_012668654.1 CDS COG3264 1345711 1348146 + [M] Small-conductance mechanosensitive channel 748 dld CDS COG0277 1348182 1349921 - [C] FAD/FMN-containing dehydrogenases 749 bglX CDS COG1472 1350111 1352408 + [G] Beta-glucosidase-related glycosidases cds-WP_012668651.1 CDS NA 1352422 1352652 + NA 750 cds-WP_012668650.1 CDS NA 1352760 1353869 + NA 751 idi CDS COG1443 1354030 1354572 + [I] Isopentenyldiphosphate isomerase 752 cds-WP_041474014.1 CDS NA 1355419 1355523 - NA 753 cds-WP_012668647.1 CDS ROG0055 1355618 1356133 - NA cds-WP_012668646.1 CDS COG2230 1356212 1357456 - [M] Cyclopropane fatty acid synthase and related cds-WP_012668645.1 CDS COG3496 1357460 1358173 - [S] Uncharacterized conserved protein cds-WP_012668644.1 CDS COG2907 1358170 1359435 - [R] Predicted NAD/FAD-binding protein cds-WP_012668643.1 CDS COG3967 1359439 1360155 - [M] Short-chain dehydrogenase involved in D-alanine esterification cds-WP_012668642.1 CDS ROG0063 1360152 1360583 - NA cds-WP_012668641.1 CDS COG2452 1360595 1361326 - [L] Predicted site-specific integrase-resolvase 754 cds-WP_012668640.1 CDS COG1396 1361477 1362040 + [K] Predicted transcriptional regulators cds-WP_012668639.1 CDS COG0454 1362037 1362555 + [KR] Histone acetyltransferase HPA2 and related acetyltransferases 755 dinG CDS COG1199 1362662 1364824 + [KL] Rad3-related DNA helicases ybiB CDS COG0547 1364847 1365818 + [E] Anthranilate phosphoribosyltransferase 756 cds-WP_012668636.1 CDS COG1473 1365858 1367015 - [R] Metal-dependent amidase/aminoacylase/carboxypeptidase 757 cds-WP_012668635.1 CDS COG2987 1367131 1368816 - [E] Urocanate hydratase hutH CDS COG2986 1368834 1370384 - [E] Histidine ammonia-lyase 758 hutC CDS COG2188 1370676 1371431 + [K] Transcriptional regulators 759 cds-WP_012668632.1 CDS COG3758 1371435 1371977 - [S] Uncharacterized protein conserved in bacteria cds-WP_012668631.1 CDS COG0402 1371974 1373329 - [FR] Cytosine deaminase and related metal-dependent hydrolases 760 hutI CDS COG1228 1373411 1374628 + [Q] Imidazolonepropionase and related amidohydrolases hutG CDS COG3741 1374625 1375419 + [E] N-formylglutamate amidohydrolase 761 cds-WP_012668628.1 CDS NA 1375664 1376368 + NA cds-WP_012668627.1 CDS NA 1376365 1376814 + NA 762 cds-WP_012668626.1 CDS NA 1376915 1377619 + NA cds-WP_012668625.1 CDS NA 1377616 1378047 + NA 763 cds-CPI84_RS06740 CDS COG3741 1378490 1378657 + [E] N-formylglutamate amidohydrolase 764 cds-WP_012668624.1 CDS COG4502 1378698 1379219 - [S] Uncharacterized protein conserved in bacteria 765 cds-WP_012668623.1 CDS COG1853 1379337 1379603 - [R] Conserved protein/domain typically associated with flavoprotein 766 rlmF CDS COG3129 1379702 1380631 + [R] Predicted SAM-dependent methyltransferase 767 cds-CPI84_RS06760 CDS NA 1380637 1381387 - NA 768 cds-WP_012666458.1-4 CDS COG3335 1381889 1382929 + [L] Transposase and inactivated derivatives 769 cds-WP_012668621.1 CDS NA 1383083 1383325 - NA 770 glnQ CDS COG1126 1383575 1384297 - [E] ABC-type polar amino acid transport system, glnP CDS COG0765 1384294 1384953 - [E] ABC-type amino acid transport system, permease glnH CDS COG0834 1385054 1385800 - [ET] ABC-type amino acid transport/signal transduction systems, 771 cds-WP_012668617.1 CDS COG1734 1386091 1386354 - [T] DnaK suppressor protein 772 dps CDS COG0783 1386432 1386935 - [P] DNA-binding ferritin-like protein (oxidative damage protectant) 773 rhtA CDS COG5006 1387293 1388189 - [R] Predicted permease, DMT superfamily 774 ompX CDS COG3637 1388546 1389055 + [M] Opacity protein and related surface antigens 775 mntR CDS COG1321 1389605 1390057 + [K] Mn-dependent transcriptional regulator 776 cds-WP_012668611.1 CDS COG1566 1390348 1391490 + [V] Multidrug resistance efflux pump cds-WP_012668610.1 CDS COG2814 1391487 1393055 + [G] Arabinose efflux permease cds-WP_012668609.1 CDS COG1538 1393057 1394604 + [MU] Outer membrane protein 777 cds-WP_012668608.1 CDS COG2814 1395317 1396807 + [G] Arabinose efflux permease 778 cds-WP_012668607.1 CDS COG0488 1396947 1398539 + [R] ATPase components of ABC transporters with 779 moeB CDS COG0476 1398686 1399456 - [H] Dinucleotide-utilizing enzymes involved in molybdopterin and moeA CDS COG0303 1399458 1400693 - [H] Molybdopterin biosynthesis enzyme 780 cds-WP_012668604.1 CDS COG1446 1400950 1401876 + [E] Asparaginase gsiA CDS COG1123 1401876 1403723 + [R] ATPase components of various ABC-type transport gsiB CDS COG0747 1403752 1405290 + [E] ABC-type dipeptide transport system, periplasmic component gsiC CDS COG0601 1405331 1406251 + [EP] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components gsiD CDS COG1173 1406261 1407166 + [EP] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 781 cds-WP_012668599.1 CDS COG1686 1407408 1408616 + [M] D-alanyl-D-alanine carboxypeptidase 782 cds-WP_012668598.1 CDS COG0814 1408705 1409988 - [E] Amino acid permeases 783 cds-WP_012668596.1 CDS COG3907 1410809 1411585 - [R] PAP2 (acid phosphatase) superfamily protein 784 cds-WP_012668595.1 CDS COG2985 1411813 1413501 - [R] Predicted permease 785 cds-WP_012668594.1 CDS COG0695 1413830 1414093 - [O] Glutaredoxin and related proteins 786 cds-WP_012668593.1 CDS NA 1414272 1414508 + NA nfsA CDS COG0778 1414492 1415214 + [C] Nitroreductase 787 cds-WP_041474123.1 CDS ROG6463 1415494 1415973 + NA 788 potF CDS COG0687 1416414 1417523 + [E] Spermidine/putrescine-binding periplasmic protein potG CDS COG3842 1417656 1418789 + [E] ABC-type spermidine/putrescine transport systems, ATPase components potH CDS COG1176 1418806 1419768 + [E] ABC-type spermidine/putrescine transport system, permease component potI CDS COG1177 1419765 1420610 + [E] ABC-type spermidine/putrescine transport system, permease component 789 cds-WP_104945038.1 CDS NA 1420821 1421312 + NA 790 cds-WP_012668585.1 CDS COG0834 1421360 1422091 - [ET] ABC-type amino acid transport/signal transduction systems, artM CDS COG4160 1422222 1422893 - [E] ABC-type arginine/histidine transport system, permease component artQ CDS COG4215 1422893 1423609 - [E] ABC-type arginine transport system, permease component artJ CDS COG0834 1423613 1424344 - [ET] ABC-type amino acid transport/signal transduction systems, artP CDS COG4161 1424360 1425088 - [E] ABC-type arginine transport system, ATPase component 791 cds-WP_012668580.1 CDS COG3042 1425291 1425821 - [R] Putative hemolysin 792 cds-WP_012668579.1 CDS COG0393 1425922 1426245 + [S] Uncharacterized conserved protein cds-WP_187298271.1 CDS COG3023 1426263 1427087 + [V] Negative regulator of beta-lactamase expression 793 ltaE CDS COG2008 1427091 1428095 - [E] Threonine aldolase poxB CDS COG0028 1428159 1429880 - [EH] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate 794 cds-WP_012668575.1 CDS COG3593 1430107 1431759 + [L] Predicted ATP-dependent endonuclease of the OLD 795 cspD CDS COG1278 1431941 1432168 - [K] Cold shock proteins 796 clpS CDS COG2127 1432583 1432903 + [S] Uncharacterized conserved protein clpA CDS COG0542 1432932 1435208 + [O] ATPases with chaperone activity, ATP-binding subunit 797 infA CDS COG0361 1435533 1435751 - [J] Translation initiation factor 1 (IF-1) 798 aat CDS COG2360 1436109 1436801 - [O] Leu/Phe-tRNA-protein transferase cydC CDS COG4987 1436832 1438562 - [CO] ABC-type transport system involved in cytochrome cydD CDS COG4988 1438559 1440328 - [CO] ABC-type transport system involved in cytochrome 799 trxB CDS COG0492 1440471 1441436 - [O] Thioredoxin reductase 800 lrp CDS COG1522 1441962 1442456 + [K] Transcriptional regulators 801 cds-WP_012668567.1 CDS COG1674 1442575 1445973 + [D] DNA segregation ATPase FtsK/SpoIIIE and related lolA CDS COG2834 1446172 1446783 + [M] Outer membrane lipoprotein-sorting protein cds-WP_012668565.1 CDS COG2256 1446791 1448134 + [L] ATPase related to the helicase subunit serS CDS COG0172 1448231 1449523 + [J] Seryl-tRNA synthetase 802 cds-WP_014539130.1 CDS COG3271 1449633 1449815 - [R] Predicted double-glycine peptidase cds-WP_012668563.1 CDS NA 1449876 1450169 - NA 803 cds-WP_012668562.1 CDS NA 1450359 1450886 - NA 804 cds-WP_012668561.1 CDS COG0738 1451262 1452413 + [G] Fucose permease 805 cds-WP_012668560.1 CDS COG1944 1453324 1455081 - [S] Uncharacterized conserved protein 806 serC CDS COG1932 1455390 1456475 + [HE] Phosphoserine aminotransferase aroA CDS COG0128 1456564 1457850 + [E] 5-enolpyruvylshikimate-3-phosphate synthase cmk CDS COG0283 1457995 1458678 + [F] Cytidylate kinase rpsA CDS COG0539 1458832 1460505 + [J] Ribosomal protein S1 ihfB CDS COG0776 1460587 1460874 + [L] Bacterial nucleoid DNA-binding protein 807 cds-WP_012668554.1 CDS COG2333 1461071 1463335 + [R] Predicted hydrolase (metallo-beta-lactamase superfamily) msbA CDS COG1132 1463372 1465120 + [V] ABC-type multidrug transport system, ATPase and lpxK CDS COG1663 1465117 1466097 + [M] Tetraacyldisaccharide-1-P 4'-kinase cds-WP_012668551.1 CDS COG2835 1466352 1466534 + [S] Uncharacterized conserved protein kdsB CDS COG1212 1466531 1467277 + [M] CMP-2-keto-3-deoxyoctulosonic acid synthetase 808 elyC CDS COG1434 1467358 1468146 - [S] Uncharacterized conserved protein 809 cmoM CDS COG0500 1468273 1469061 + [QR] SAM-dependent methyltransferases mukF CDS COG3006 1469054 1470376 + [D] Uncharacterized protein involved in chromosome partitioning mukE CDS COG3095 1470357 1471082 + [D] Uncharacterized protein involved in chromosome partitioning mukB CDS COG3096 1471083 1475531 + [D] Uncharacterized protein involved in chromosome partitioning 810 ldtD CDS COG2989 1475707 1477554 + [S] Uncharacterized protein conserved in bacteria cds-WP_012668543.1 CDS COG3108 1477733 1478281 + [S] Uncharacterized protein conserved in bacteria cds-WP_012668542.1 CDS COG0491 1478324 1478953 + [R] Zn-dependent hydrolases, including glyoxylases 811 cds-WP_012668541.1 CDS COG1448 1479052 1480242 - [E] Aspartate/tyrosine/aromatic aminotransferase 812 ompC CDS COG3203 1480468 1481568 - [M] Outer membrane protein (porin) 813 asnS CDS COG0017 1481872 1483272 - [J] Aspartyl/asparaginyl-tRNA synthetases 814 pncB CDS COG1488 1483439 1484659 - [H] Nicotinic acid phosphoribosyltransferase 815 pepN CDS COG0308 1484909 1487524 + [E] Aminopeptidase N 816 ssuB CDS COG1116 1487583 1488371 - [P] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component ssuC CDS COG0600 1488368 1489159 - [P] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component ssuD CDS COG2141 1489164 1490315 - [C] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and cds-WP_012668533.1 CDS COG0715 1490331 1491290 - [P] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components ssuE CDS COG0431 1491306 1491857 - [R] Predicted flavoprotein 817 pyrD CDS COG0167 1492122 1493132 + [F] Dihydroorotate dehydrogenase 818 cds-WP_012668530.1 CDS ROG3478 1493317 1493862 + NA 819 cds-WP_012668529.1 CDS COG3217 1493878 1494987 - [R] Uncharacterized Fe-S protein 820 rlmKL CDS COG0116 1495121 1497238 + [L] Predicted N6-adenine-specific DNA methylase cds-WP_012668527.1 CDS COG0488 1497245 1499161 + [R] ATPase components of ABC transporters with pqiA CDS COG2995 1499177 1500451 + [S] Uncharacterized paraquat-inducible protein A pqiB CDS COG3008 1500438 1502078 + [R] Paraquat-inducible protein B pqiC CDS COG3009 1502078 1502638 + [S] Uncharacterized protein conserved in bacteria 821 rmf CDS COG3130 1502915 1503082 + [J] Ribosome modulation factor 822 fabA CDS COG0764 1503160 1503678 - [I] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases cds-WP_012668522.1 CDS COG1067 1503747 1505510 - [O] Predicted ATP-dependent protease 823 matP CDS COG3120 1505695 1506147 + [S] Uncharacterized protein conserved in bacteria 824 ompA CDS COG2885 1506236 1507303 - [M] Outer membrane protein and related peptidoglycan-associated 825 sulA CDS COG5404 1507654 1508160 - [D] SOS-response cell division inhibitor, blocks FtsZ 826 cds-WP_012668518.1 CDS COG3070 1508758 1509387 + [K] Regulator of competence-specific genes 827 yccS CDS COG1289 1509384 1511522 - [S] Predicted membrane protein cds-WP_012668516.1 CDS COG3304 1511532 1511978 - [S] Predicted membrane protein 828 helD CDS COG1074 1512113 1514167 + [L] ATP-dependent exoDNAse (exonuclease V) beta subunit 829 cds-WP_012668514.1 CDS COG1803 1514188 1514646 - [G] Methylglyoxal synthase cds-WP_012668513.1 CDS COG3110 1514725 1515363 - [S] Uncharacterized protein conserved in bacteria 830 cds-WP_012668512.1 CDS COG1832 1515554 1515973 + [R] Predicted CoA-binding protein 831 hspQ CDS COG3785 1515998 1516315 - [S] Uncharacterized conserved protein 832 rlmI CDS COG1092 1516378 1517568 - [R] Predicted SAM-dependent methyltransferases 833 yccX CDS COG1254 1517658 1517936 + [C] Acylphosphatases 834 cds-WP_012668508.1 CDS COG2920 1517940 1518266 - [P] Dissimilatory sulfite reductase (desulfoviridin), gamma subunit yccA CDS COG0670 1518367 1519023 - [R] Integral membrane protein, interacts with FtsH 835 cds-WP_012667416.1 CDS COG3328 1519188 1520396 + [L] Transposase and inactivated derivatives 836 rna-CPI84_RS07385 tRNA NA 1520575 1520662 + NA rna-CPI84_RS07390 tRNA NA 1520910 1520997 + NA 837 agp CDS ROG1885 1521374 1523191 + NA 838 cds-WP_012668504.1 CDS COG1012 1523291 1524664 - [C] NAD-dependent aldehyde dehydrogenases 839 cds-WP_012668503.1 CDS NA 1524818 1525048 - NA 840 cds-CPI84_RS07410 CDS NA 1525432 1526342 + NA 841 rutR CDS COG1309 1526766 1527431 + [K] Transcriptional regulator cds-WP_012668500.1 CDS COG1988 1527456 1528436 + [R] Predicted membrane-bound metal-dependent hydrolases 842 cycA CDS COG1113 1528473 1529903 - [E] Gamma-aminobutyrate permease and related permeases 843 sdiA CDS COG2771 1530611 1531333 + [K] DNA-binding HTH domain-containing proteins cds-WP_012668497.1 CDS COG3916 1531460 1532095 + [TQ] N-acyl-L-homoserine lactone synthetase 844 cds-CPI84_RS07440 CDS COG3136 1532100 1532323 - [R] Uncharacterized membrane protein required for alginate 845 cds-WP_012668496.1 CDS NA 1532402 1532626 - NA 846 uvrY CDS COG2197 1533110 1533769 + [TK] Response regulator containing a CheY-like receiver uvrC CDS COG0322 1533762 1535594 + [L] Nuclease subunit of the excinuclease complex pgsA CDS COG0558 1535666 1536214 + [I] Phosphatidylglycerophosphate synthase 847 rna-CPI84_RS07465 tRNA NA 1536380 1536455 + NA rna-CPI84_RS07470 tRNA NA 1536529 1536602 + NA rna-CPI84_RS07475 tRNA NA 1536615 1536700 + NA 848 cds-WP_012668492.1 CDS ROG4411 1536851 1537099 - NA cds-CPI84_RS07485 CDS COG3500 1537139 1537497 - [R] Phage protein D 849 cds-WP_012668491.1 CDS COG3415 1537754 1538662 + [L] Transposase and inactivated derivatives 850 cds-CPI84_RS07495 CDS COG3547 1538766 1539018 + [L] Transposase and inactivated derivatives 851 cds-CPI84_RS07500 CDS COG3415 1539733 1540575 + [L] Transposase and inactivated derivatives 852 cds-WP_104944977.1-5 CDS COG2963 1540831 1541089 + [L] Transposase and inactivated derivatives cds-WP_104944977.1-5_2 CDS COG4413 1541089 1541981 + [E] Urea transporter 853 cds-CPI84_RS07510 CDS COG3547 1542227 1542479 + [L] Transposase and inactivated derivatives 854 cds-WP_104945039.1 CDS ROG0966 1543194 1544090 + NA 855 cds-WP_012668484.1 CDS COG1846 1544410 1544841 + [K] Transcriptional regulators cds-WP_012668483.1 CDS NA 1544843 1546528 + NA cds-WP_104945040.1 CDS COG1566 1546528 1547616 + [V] Multidrug resistance efflux pump cds-WP_104945041.1 CDS COG1538 1547613 1548992 + [MU] Outer membrane protein 856 cds-WP_014539087.1 CDS COG1668 1549611 1549766 + [CP] ABC-type Na+ efflux pump, permease component 857 cds-WP_012668480.1 CDS COG1502 1549965 1551437 + [I] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 858 mdoC CDS ROG0348 1552053 1553177 - NA 859 cds-WP_012668478.1 CDS COG3131 1553430 1554983 + [P] Periplasmic glucans biosynthesis protein mdoH CDS COG2943 1554976 1557534 + [M] Membrane glycosyltransferase cds-WP_012668476.1 CDS COG5645 1557693 1557923 + [R] Predicted periplasmic lipoprotein 860 cds-WP_012668475.1 CDS NA 1557937 1558335 - NA 861 cds-WP_014543963.1 CDS COG1560 1558519 1559439 - [M] Lauroyl/myristoyl acyltransferase 862 cds-WP_012668473.1 CDS COG1054 1559648 1560700 + [R] Predicted sulfurtransferase 863 cds-WP_162013510.1 CDS COG2353 1560751 1561323 - [S] Uncharacterized conserved protein cds-WP_012668471.1 CDS COG3038 1561347 1561901 - [C] Cytochrome B561 864 cds-CPI84_RS07590 CDS COG0477 1562494 1563060 + [GEPR] Permeases of the major facilitator superfamily 865 solA CDS COG0665 1563140 1564264 - [E] Glycine/D-amino acid oxidases (deaminating) 866 bssS CDS NA 1564371 1564625 - NA 867 dinI CDS NA 1565134 1565379 - NA 868 pyrC CDS COG0418 1565448 1566500 - [F] Dihydroorotase 869 cds-WP_083791977.1 CDS ROG2451 1566627 1567190 - NA 870 grxB CDS COG2999 1567334 1567981 - [O] Glutaredoxin 2 871 rimJ CDS COG1670 1568262 1568855 + [J] Acetyltransferases, including N-acetylases of ribosomal proteins cds-WP_012668461.1 CDS COG3132 1568863 1569519 + [S] Uncharacterized protein conserved in bacteria 872 murJ CDS COG0728 1570166 1571704 + [R] Uncharacterized membrane protein, putative virulence factor 873 flgN CDS COG3418 1571764 1572195 - [NUO] Flagellar biosynthesis/type III secretory pathway chaperone flgM CDS COG2747 1572200 1572499 - [KNU] Negative regulator of flagellin synthesis (anti-sigma28 flgA CDS COG1261 1572607 1573275 - [NO] Flagellar basal body P-ring biosynthesis protein 874 flgB CDS COG1815 1573430 1573843 + [N] Flagellar basal body protein flgC CDS COG1558 1573847 1574251 + [N] Flagellar basal body rod protein flgD CDS COG1843 1574263 1574937 + [N] Flagellar hook capping protein flgE CDS COG1749 1574968 1576176 + [N] Flagellar hook protein FlgE cds-WP_012668451.1 CDS COG4787 1576198 1576953 + [N] Flagellar basal body rod protein flgG CDS COG4786 1576969 1577751 + [N] Flagellar basal body rod protein flgH CDS COG2063 1577842 1578543 + [N] Flagellar basal body L-ring protein cds-WP_104945051.1 CDS COG1706 1578553 1579659 + [N] Flagellar basal-body P-ring protein flgJ CDS COG1705 1579659 1580600 + [NU] Muramidase (flagellum-specific) flgK CDS COG1256 1580734 1582389 + [N] Flagellar hook-associated protein flgL CDS ROG2760 1582410 1583375 + NA 875 rne CDS COG1530 1583659 1587522 - [J] Ribonucleases G and E 876 rluC CDS COG0564 1588145 1589107 + [J] Pseudouridylate synthases, 23S RNA-specific 877 cds-WP_081441641.1 CDS COG0424 1589146 1589730 - [D] Nucleotide-binding protein implicated in inhibition of 878 yceD CDS COG1399 1589873 1590394 + [R] Predicted metal-binding, possibly nucleic acid-binding protein rpmF CDS COG0333 1590409 1590579 + [J] Ribosomal protein L32 plsX CDS COG0416 1590602 1591636 + [I] Fatty acid/phospholipid biosynthesis enzyme cds-WP_012668440.1 CDS COG0332 1591643 1592596 + [I] 3-oxoacyl-[acyl-carrier-protein] synthase III fabD CDS COG0331 1592631 1593560 + [I] (acyl-carrier-protein) S-malonyltransferase fabG CDS COG1028 1593575 1594309 + [IQR] Dehydrogenases with different specificities (related to acpP CDS COG0236 1594463 1594699 + [IQ] Acyl carrier protein fabF CDS COG0304 1594788 1596029 + [IQ] 3-oxoacyl-(acyl-carrier-protein) synthase pabC CDS COG0115 1596207 1597025 + [EH] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase mltG CDS COG1559 1597015 1598043 + [R] Predicted periplasmic solute-binding protein tmk CDS COG0125 1598033 1598665 + [F] Thymidylate kinase holB CDS COG2812 1598662 1599666 + [L] DNA polymerase III, gamma/tau subunits cds-WP_012668432.1 CDS COG0084 1599672 1600463 + [L] Mg-dependent DNase 879 ptsG CDS COG1263 1600772 1602205 + [G] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 880 hinT CDS COG0537 1602433 1602783 + [FGR] Diadenosine tetraphosphate (Ap4A) hydrolase and other cds-WP_012668429.1 CDS COG5633 1602810 1603178 + [R] Predicted periplasmic lipoprotein lpoB CDS COG3417 1603190 1603786 + [R] Collagen-binding surface adhesin SpaP (antigen I/II thiK CDS COG0510 1603770 1604612 + [M] Predicted choline kinase involved in LPS nagZ CDS COG1472 1604623 1605654 + [G] Beta-glucosidase-related glycosidases 881 cds-WP_012668425.1 CDS COG2828 1606047 1607135 + [S] Uncharacterized protein conserved in bacteria 882 cds-WP_041474119.1 CDS COG1252 1607513 1608817 + [C] NADH dehydrogenase, FAD-containing subunit 883 cds-WP_012668423.1 CDS COG3134 1609119 1609658 + [S] Predicted outer membrane lipoprotein 884 cds-WP_012668422.1 CDS NA 1609885 1610985 - NA 885 cds-WP_012666458.1-5 CDS COG3335 1611270 1612310 + [L] Transposase and inactivated derivatives 886 mfd CDS COG1197 1612500 1615946 - [LK] Transcription-repair coupling factor (superfamily II helicase) 887 cds-WP_012668420.1 CDS NA 1616154 1617374 - NA cds-WP_012668419.1 CDS COG3769 1617403 1618203 - [R] Predicted hydrolase (HAD superfamily) 888 cds-WP_012668417.1 CDS ROG4884 1618647 1619036 + NA 889 cds-WP_004157155.1 CDS COG0401 1619268 1619426 + [S] Uncharacterized homolog of Blt101 890 rcsA CDS COG2771 1619779 1620414 - [K] DNA-binding HTH domain-containing proteins 891 fliR CDS COG1684 1621063 1621848 - [NU] Flagellar biosynthesis pathway, component FliR fliQ CDS COG1987 1621848 1622117 - [NU] Flagellar biosynthesis pathway, component FliQ fliP CDS COG1338 1622133 1622870 - [NU] Flagellar biosynthesis pathway, component FliP fliO CDS COG3190 1622867 1623256 - [N] Flagellar biogenesis protein fliN CDS COG1886 1623257 1623658 - [NU] Flagellar motor switch/type III secretory pathway fliM CDS COG1868 1623651 1624661 - [N] Flagellar motor switch protein fliL CDS COG1580 1624671 1625153 - [N] Flagellar basal body-associated protein cds-WP_012668408.1 CDS COG3144 1625305 1626564 - [N] Flagellar hook-length control protein fliJ CDS COG2882 1626561 1627007 - [NUO] Flagellar biosynthesis chaperone fliI CDS COG1157 1627034 1628395 - [NU] Flagellar biosynthesis/type III secretory pathway ATPase fliH CDS COG1317 1628395 1629084 - [NU] Flagellar biosynthesis/type III secretory pathway protein fliG CDS COG1536 1629077 1630069 - [N] Flagellar motor switch protein fliF CDS COG1766 1630066 1631775 - [NU] Flagellar biosynthesis/type III secretory pathway lipoprotein 892 fliE CDS COG1677 1632016 1632327 + [NU] Flagellar hook-basal body protein 893 cds-WP_012668401.1 CDS COG0835 1633508 1634464 + [NT] Chemotaxis signal transduction protein 894 cds-WP_071819816.1 CDS NA 1634736 1634918 + NA 895 cds-WP_012668399.1 CDS NA 1635868 1636236 + NA 896 cds-WP_012668398.1 CDS NA 1636696 1638444 + NA 897 cds-WP_012668397.1 CDS COG2199 1638555 1639949 - [T] FOG: GGDEF domain 898 lolC CDS COG4591 1640535 1641734 + [M] ABC-type transport system, involved in lipoprotein lolD CDS COG1136 1641727 1642431 + [V] ABC-type antimicrobial peptide transport system, ATPase lolE CDS COG4591 1642431 1643675 + [M] ABC-type transport system, involved in lipoprotein nagK CDS COG1940 1643690 1644601 + [KG] Transcriptional regulator/sugar kinase cobB CDS COG0846 1644610 1645524 + [K] NAD-dependent protein deacetylases, SIR2 family 899 cds-WP_012668391.1 CDS COG3135 1645474 1646646 - [Q] Uncharacterized protein involved in benzoate metabolism 900 cds-WP_012668390.1 CDS COG1396 1646754 1647323 + [K] Predicted transcriptional regulators 901 cds-WP_012668389.1 CDS COG2850 1647481 1648608 - [S] Uncharacterized conserved protein 902 phoQ CDS COG2205 1648808 1650253 - [T] Osmosensitive K+ channel histidine kinase phoP CDS COG0745 1650258 1650926 - [TK] Response regulators consisting of a CheY-like 903 purB CDS COG0015 1651050 1652420 - [F] Adenylosuccinate lyase hflD CDS COG2915 1652450 1653094 - [R] Uncharacterized protein involved in purine metabolism mnmA CDS COG0482 1653120 1654229 - [J] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop 904 cds-WP_012668383.1 CDS COG1051 1654339 1654815 - [F] ADP-ribose pyrophosphatase rluE CDS COG1187 1654863 1655519 - [J] 16S rRNA uridine-516 pseudouridylate synthase and 905 icd CDS COG0538 1655623 1656873 + [C] Isocitrate dehydrogenases 906 cds-WP_012668380.1 CDS COG1672 1656979 1658346 - [R] Predicted ATPase (AAA+ superfamily) cds-WP_012668379.1 CDS ROG7249 1658380 1659507 - NA cds-WP_041474008.1 CDS NA 1659488 1659733 - NA cds-WP_104945056.1 CDS ROG2424 1659776 1660345 - NA cds-WP_104945194.1 CDS NA 1660342 1660710 - NA 907 cds-WP_104945057.1 CDS NA 1660777 1661478 - NA cds-WP_012668375.1 CDS NA 1661453 1661896 - NA cds-WP_012668374.1 CDS COG1896 1661889 1662419 - [R] Predicted hydrolases of HD superfamily 908 cds-WP_104945058.1 CDS COG5532 1662552 1663379 - [S] Uncharacterized conserved protein cds-WP_012668372.1 CDS NA 1663439 1663810 - NA 909 cds-WP_012668371.1 CDS NA 1664115 1664348 + NA 910 cds-WP_049779063.1 CDS NA 1664326 1664565 - NA 911 cds-WP_104945030.1-2 CDS COG2963 1665571 1665820 - [L] Transposase and inactivated derivatives cds-WP_104945030.1-2_2 CDS NA 1664652 1665571 - NA 912 cds-WP_012668369.1 CDS COG2932 1666713 1667303 - [K] Predicted transcriptional regulator 913 cds-WP_012668368.1 CDS COG2932 1667410 1667634 + [K] Predicted transcriptional regulator cds-WP_012668367.1 CDS NA 1667654 1668118 + NA 914 cds-WP_012668366.1 CDS NA 1668183 1668374 + NA cds-WP_012668365.1 CDS NA 1668371 1669183 + NA cds-WP_012668364.1 CDS NA 1669180 1669362 + NA cds-WP_012668363.1 CDS ROG1946 1669359 1670411 + NA cds-WP_012668362.1 CDS ROG4368 1670408 1670860 + NA cds-WP_012668361.1 CDS ROG4881 1670854 1671735 + NA cds-WP_012668360.1 CDS ROG3846 1671732 1672808 + NA cds-WP_012668359.1 CDS NA 1672801 1673172 + NA 915 cds-WP_012668358.1 CDS NA 1673208 1673501 - NA cds-WP_012668357.1 CDS ROG5847 1673507 1674322 - NA 916 cds-WP_012668356.1 CDS NA 1674559 1674759 + NA 917 cds-WP_012668355.1 CDS COG0863 1674908 1675966 + [L] DNA modification methylase 918 cds-WP_012668354.1 CDS COG1598 1676021 1676434 - [S] Uncharacterized conserved protein cds-WP_041474006.1 CDS COG1724 1676490 1676672 - [N] Predicted periplasmic or secreted lipoprotein 919 cds-WP_012668353.1 CDS NA 1676831 1677178 + NA cds-WP_041474005.1 CDS ROG2971 1677159 1677578 + NA cds-WP_148666347.1 CDS NA 1677623 1678138 + NA cds-WP_014539028.1 CDS NA 1678116 1678466 + NA 920 cds-WP_012668349.1 CDS COG3747 1678788 1679255 + [L] Phage terminase, small subunit cds-WP_014539025.1 CDS COG4626 1679209 1680954 + [R] Phage terminase-like protein, large subunit cds-WP_012668347.1 CDS COG4695 1680954 1682258 + [S] Phage-related protein cds-WP_012668346.1 CDS COG0740 1682270 1683118 + [OU] Protease subunit of ATP-dependent Clp proteases cds-WP_012668345.1 CDS ROG2058 1683128 1684345 + NA cds-WP_104945059.1 CDS NA 1684345 1684803 + NA cds-WP_012668343.1 CDS ROG2174 1684813 1685142 + NA cds-WP_012668342.1 CDS COG5614 1685144 1685533 + [R] Bacteriophage head-tail adaptor cds-WP_104945060.1 CDS NA 1685526 1686032 + NA cds-WP_012668340.1 CDS NA 1686029 1686589 + NA cds-WP_012668339.1 CDS NA 1686593 1686772 + NA cds-WP_104945061.1 CDS COG4386 1686772 1688268 + [R] Mu-like prophage tail sheath protein gpL cds-WP_104945062.1 CDS ROG7545 1688268 1688624 + NA cds-WP_104945063.1 CDS NA 1688621 1688944 + NA 921 cds-WP_012668335.1 CDS COG5283 1689029 1690936 + [S] Phage-related tail protein cds-WP_104945064.1 CDS COG4228 1690972 1692273 + [R] Mu-like prophage DNA circulation protein cds-WP_104945065.1 CDS COG4379 1692270 1693346 + [R] Mu-like prophage tail protein gpP cds-WP_012668332.1 CDS COG4384 1693346 1693882 + [S] Mu-like prophage protein gp45 cds-WP_104945066.1 CDS COG4381 1693882 1694295 + [S] Mu-like prophage protein gp46 cds-WP_012668330.1 CDS COG3299 1694288 1695361 + [S] Uncharacterized homolog of phage Mu protein cds-WP_012668329.1 CDS COG3778 1695364 1695945 + [S] Uncharacterized protein conserved in bacteria cds-CPI84_RS08360 CDS NA 1695938 1696105 + NA 922 cds-WP_012666458.1-6 CDS COG3335 1696117 1697157 - [L] Transposase and inactivated derivatives 923 cds-CPI84_RS08370 CDS NA 1697249 1698055 + NA cds-WP_104945067.1 CDS NA 1698052 1698612 + NA 924 cds-WP_012668326.1 CDS NA 1698733 1699569 - NA 925 cds-CPI84_RS08385 CDS COG0538 1699821 1699991 + [C] Isocitrate dehydrogenases 926 cds-WP_104945024.1-2 CDS COG2963 1701683 1701929 - [L] Transposase and inactivated derivatives cds-WP_104945024.1-2_2 CDS NA 1700794 1701683 - NA 927 cds-WP_012668325.1 CDS ROG3858 1702051 1702971 - NA 928 cds-WP_012668324.1 CDS NA 1703345 1703725 + NA cds-WP_014544100.1 CDS NA 1703712 1704002 + NA 929 cds-WP_012668322.1 CDS NA 1704502 1704747 - NA 930 cds-WP_012668321.1 CDS COG0491 1705049 1705723 - [R] Zn-dependent hydrolases, including glyoxylases ldcA CDS COG1619 1705720 1706664 - [V] Uncharacterized proteins, homologs of microcin C7 931 emtA CDS COG0741 1706859 1707494 + [M] Soluble lytic murein transglycosylase and related 932 cds-WP_012668318.1 CDS COG2261 1708153 1708401 + [S] Predicted membrane protein 933 treA CDS COG1626 1708488 1710164 - [G] Neutral trehalase 934 argC CDS COG0002 1710447 1711376 - [E] Acetylglutamate semialdehyde dehydrogenase 935 cds-WP_012668315.1 CDS NA 1711513 1711776 - NA 936 cds-WP_012668314.1 CDS COG1951 1712206 1713852 - [C] Tartrate dehydratase alpha subunit/Fumarate hydratase class cds-WP_012668313.1 CDS COG0471 1714034 1715545 - [P] Di- and tricarboxylate transporters 937 cds-WP_012668312.1 CDS COG1053 1716123 1718900 + [C] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit cds-WP_012668311.1 CDS COG1477 1718974 1719942 + [H] Membrane-associated lipoprotein involved in thiamine biosynthesis 938 dcuR CDS COG4565 1719923 1720642 - [KT] Response regulator of citrate/malate metabolism cds-WP_012668309.1 CDS COG3290 1720639 1722279 - [T] Signal transduction histidine kinase regulating citrate/malate 939 cds-WP_012668308.1 CDS ROG7894 1722637 1722867 - NA cds-WP_012668307.1 CDS ROG7894 1722883 1723116 - NA 940 cds-WP_104944977.1-6 CDS COG2963 1723618 1723876 + [L] Transposase and inactivated derivatives cds-WP_104944977.1-6_2 CDS COG4413 1723876 1724768 + [E] Urea transporter 941 cds-CPI84_RS08515 CDS NA 1724978 1725226 - NA 942 cds-WP_012668305.1 CDS NA 1725403 1725648 - NA 943 cds-WP_049779061.1 CDS COG3710 1727011 1727643 + [K] DNA-binding winged-HTH domains 944 cds-WP_012668303.1 CDS NA 1727973 1728338 - NA cds-WP_104945068.1 CDS NA 1728325 1729014 - NA cds-WP_012668301.1 CDS NA 1728995 1729549 - NA sctJ_2 CDS COG4669 1729554 1730315 - [U] Type III secretory pathway, lipoprotein EscJ sctI CDS NA 1730315 1730638 - NA sctF CDS NA 1730682 1730954 - NA cds-WP_012668297.1 CDS NA 1730932 1732218 - NA 945 cds-WP_012668296.1 CDS COG2207 1732577 1733443 + [K] AraC-type DNA-binding domain-containing proteins sctC_2 CDS COG1450 1733436 1735202 + [NU] Type II secretory pathway, component PulD cds-WP_012668294.1 CDS ROG3853 1735215 1736330 + NA cds-WP_012668293.1 CDS COG4789 1736372 1738447 + [U] Type III secretory pathway, component EscV cds-WP_012668292.1 CDS NA 1738437 1738844 + NA sctN_2 CDS COG1157 1738861 1740156 + [NU] Flagellar biosynthesis/type III secretory pathway ATPase cds-WP_041474004.1 CDS NA 1740131 1740601 + NA cds-WP_041474003.1 CDS NA 1740582 1741427 + NA cds-WP_012668288.1 CDS COG1886 1741424 1742350 + [NU] Flagellar motor switch/type III secretory pathway cds-WP_012668287.1 CDS COG4790 1742340 1743011 + [U] Type III secretory pathway, component EscR sctS_2 CDS COG4794 1743008 1743262 + [U] Type III secretory pathway, component EscS sctT_2 CDS COG4791 1743275 1744045 + [U] Type III secretory pathway, component EscT cds-WP_012668284.1 CDS COG1377 1744059 1745150 + [NU] Flagellar biosynthesis pathway, component FlhB cds-WP_012668283.1 CDS COG0457 1745305 1745862 + [R] FOG: TPR repeat sctE CDS NA 1745859 1747760 + NA cds-WP_012668281.1 CDS NA 1747801 1748802 + NA 946 cds-WP_104945196.1 CDS NA 1748868 1750019 + NA 947 cds-WP_012668279.1 CDS NA 1750289 1751494 + NA 948 cds-CPI84_RS08655 CDS ROG6832 1751701 1751925 + NA 949 cds-WP_187298272.1 CDS NA 1752713 1756480 + NA 950 ychF CDS COG0012 1756833 1757924 - [J] Predicted GTPase, probable translation factor 951 cds-WP_012668275.1 CDS COG0659 1758283 1759764 + [P] Sulfate permease and related transporters (MFS 952 cds-WP_041474114.1 CDS COG2908 1759899 1760579 + [S] Uncharacterized protein conserved in bacteria 953 pth CDS COG0193 1760614 1761201 - [J] Peptidyl-tRNA hydrolase 954 ychH CDS ROG0375 1761472 1761756 + NA 955 prs CDS COG0462 1762071 1763018 - [FE] Phosphoribosylpyrophosphate synthetase ispE CDS COG1947 1763276 1764139 - [I] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase lolB CDS COG3017 1764136 1764762 - [M] Outer membrane lipoprotein involved in outer 956 hemA CDS COG0373 1764988 1766244 + [H] Glutamyl-tRNA reductase prfA CDS COG0216 1766284 1767366 + [J] Protein chain release factor A prmC CDS COG2890 1767366 1768211 + [J] Methylase of polypeptide chain release factors cds-WP_012668265.1 CDS COG3094 1768212 1768619 + [S] Uncharacterized protein conserved in bacteria sirB1 CDS COG2912 1768610 1769416 + [S] Uncharacterized conserved protein kdsA CDS COG2877 1769448 1770302 + [M] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 957 cds-WP_012668262.1 CDS COG3187 1770395 1770814 + [O] Heat shock protein 958 chaA CDS COG0387 1771028 1772119 - [P] Ca2+/H+ antiporter 959 cds-WP_012668260.1 CDS COG1609 1772482 1773510 - [K] Transcriptional regulators cds-WP_012668259.1 CDS COG1621 1773539 1774948 - [G] Beta-fructosidases (levanase/invertase) cds-WP_104945069.1 CDS COG1263 1774945 1776318 - [G] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific cds-WP_012668257.1 CDS COG4580 1776353 1777897 - [G] Maltoporin (phage lambda and maltose receptor) 960 cds-WP_012668256.1 CDS COG0524 1778177 1779103 - [G] Sugar kinases, ribokinase family 961 cds-WP_012668255.1 CDS COG3703 1779389 1780066 + [P] Uncharacterized protein involved in cation transport 962 tagH CDS COG3456 1780215 1781387 - [T] Uncharacterized conserved protein, contains FHA domain tagF CDS COG3913 1781425 1782123 - [S] Uncharacterized protein conserved in bacteria tssM CDS COG3523 1782136 1784247 - [S] Uncharacterized protein conserved in bacteria icmH CDS COG3455 1784247 1785470 - [S] Uncharacterized protein conserved in bacteria 963 cds-WP_041474113.1 CDS ROG3089 1785869 1787356 + NA 964 cds-WP_012668248.1 CDS COG3203 1787539 1788609 - [M] Outer membrane protein (porin) 965 cds-WP_012668246.1 CDS COG4992 1789461 1790681 + [E] Ornithine/acetylornithine aminotransferase astA CDS COG3138 1790678 1791712 + [E] Arginine/ornithine N-succinyltransferase beta subunit astD CDS COG1012 1791709 1793178 + [C] NAD-dependent aldehyde dehydrogenases astB CDS COG3724 1793175 1794500 + [E] Succinylarginine dihydrolase astE CDS COG2988 1794552 1795553 + [E] Succinylglutamate desuccinylase 966 spy CDS COG3678 1795901 1796389 + [UNTP] P pilus assembly/Cpx signaling pathway, periplasmic 967 cho CDS COG0322 1796517 1797386 - [L] Nuclease subunit of the excinuclease complex 968 nadE CDS COG0171 1797535 1798362 - [H] NAD synthase 969 cds-WP_012668238.1 CDS COG0477 1798489 1799679 - [GEPR] Permeases of the major facilitator superfamily 970 osmE CDS COG2913 1799863 1800198 + [J] Small protein A (tmRNA-binding) 971 cds-WP_012668236.1 CDS COG1823 1800431 1801825 - [R] Predicted Na+/dicarboxylate symporter 972 cds-WP_012668235.1 CDS COG1988 1801989 1802579 - [R] Predicted membrane-bound metal-dependent hydrolases 973 hxpB CDS COG0637 1802847 1803518 - [R] Predicted phosphatase/phosphohexomutase 974 cds-WP_012668233.1 CDS NA 1803687 1804226 + NA 975 cds-WP_012668232.1 CDS COG3001 1804253 1805146 - [G] Fructosamine-3-kinase 976 ghoS CDS NA 1805244 1805534 - NA 977 cds-WP_012668230.1 CDS COG3137 1805986 1806741 + [M] Putative salt-induced outer membrane protein 978 cds-CPI84_RS08895 CDS NA 1806808 1809602 - NA 979 cds-CPI84_RS08900 CDS NA 1810036 1810579 + NA 980 thrS CDS COG0441 1810853 1812781 + [J] Threonyl-tRNA synthetase infC CDS COG0290 1812785 1813336 + [J] Translation initiation factor 3 (IF-3) rpmI CDS COG0291 1813429 1813626 + [J] Ribosomal protein L35 rplT CDS COG0292 1813703 1814059 + [J] Ribosomal protein L20 981 pheM CDS NA 1814204 1814248 + NA 982 pheS CDS COG0016 1814411 1815394 + [J] Phenylalanyl-tRNA synthetase alpha subunit pheT CDS COG0072 1815410 1817797 + [J] Phenylalanyl-tRNA synthetase beta subunit ihfA CDS COG0776 1817802 1818101 + [L] Bacterial nucleoid DNA-binding protein 983 cds-WP_012668223.1 CDS NA 1818382 1819008 + NA 984 cds-WP_012668222.1 CDS COG0386 1819319 1819864 + [O] Glutathione peroxidase 985 cds-WP_012668221.1 CDS COG0791 1820108 1820566 + [M] Cell wall-associated hydrolases (invasion-associated proteins) 986 cds-WP_012668220.1 CDS COG0397 1821027 1822466 + [S] Uncharacterized conserved protein 987 cds-WP_012668219.1 CDS COG4559 1822463 1823242 - [P] ABC-type hemin transport system, ATPase component cds-WP_012668218.1 CDS COG0609 1823235 1824233 - [P] ABC-type Fe3+-siderophore transport system, permease component cds-WP_014538977.1 CDS COG4558 1824230 1825096 - [P] ABC-type hemin transport system, periplasmic component cds-WP_012668216.1 CDS COG3720 1825048 1826079 - [P] Putative heme degradation protein 988 cds-WP_012668215.1 CDS COG1806 1826445 1827278 - [S] Uncharacterized protein conserved in bacteria 989 ppsA CDS COG0574 1827750 1830125 + [G] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase 990 ydiK CDS NA 1830581 1831705 - NA 991 cds-CPI84_RS09005 CDS COG0277 1831946 1834995 + [C] FAD/FMN-containing dehydrogenases 992 cds-WP_012668211.1 CDS NA 1835158 1835562 - NA 993 sufA CDS COG0316 1835953 1836327 + [S] Uncharacterized conserved protein sufB CDS COG0719 1836333 1837826 + [O] ABC-type transport system involved in Fe-S sufC CDS COG0396 1837880 1838626 + [O] ABC-type transport system involved in Fe-S sufD CDS COG0719 1838601 1839881 + [O] ABC-type transport system involved in Fe-S sufS CDS COG0520 1839878 1841098 + [E] Selenocysteine lyase sufE CDS COG2166 1841203 1841625 + [R] SufE protein probably involved in Fe-S 994 cds-WP_004157411.1 CDS COG4238 1841919 1842155 - [M] Murein lipoprotein 995 pykF CDS COG0469 1842460 1843872 - [G] Pyruvate kinase 996 rna-CPI84_RS09055 tRNA NA 1844297 1844373 - NA rna-CPI84_RS09060 tRNA NA 1844424 1844500 - NA 997 cds-WP_012668203.1 CDS COG0534 1844648 1846021 - [V] Na+-driven multidrug efflux pump 998 cds-WP_012668202.1 CDS COG0307 1846275 1846940 + [H] Riboflavin synthase alpha chain 999 cfa CDS COG2230 1846986 1848134 - [M] Cyclopropane fatty acid synthase and related 1000 cds-WP_012668200.1 CDS COG0477 1848441 1849655 - [GEPR] Permeases of the major facilitator superfamily 1001 cds-WP_012668199.1 CDS COG0583 1849767 1850699 + [K] Transcriptional regulator 1002 purR CDS COG1609 1850696 1851721 - [K] Transcriptional regulators 1003 cds-WP_012668197.1 CDS COG0791 1852122 1852958 - [M] Cell wall-associated hydrolases (invasion-associated proteins) 1004 cds-WP_004169715.1 CDS COG0278 1853339 1853677 + [O] Glutaredoxin-related protein 1005 rnt CDS COG0847 1853953 1854612 - [L] DNA polymerase III, epsilon subunit and 1006 gloA CDS COG0346 1854715 1855122 - [E] Lactoylglutathione lyase and related lyases cds-WP_012668194.1 CDS COG1902 1855199 1856308 - [C] NADH:flavin oxidoreductases, Old Yellow Enzyme family cds-WP_012668193.1 CDS COG1309 1856351 1856941 - [K] Transcriptional regulator eptA CDS COG2194 1856980 1858620 - [R] Predicted membrane-associated, metal-dependent hydrolase 1007 cds-WP_012668191.1 CDS COG4687 1858923 1859111 + [S] Uncharacterized protein conserved in bacteria cds-WP_012668190.1 CDS COG3313 1859153 1859392 + [R] Predicted Fe-S protein 1008 cds-WP_012668189.1 CDS COG3328 1859815 1861023 + [L] Transposase and inactivated derivatives 1009 cds-WP_012668188.1 CDS ROG2546 1861165 1861545 - NA 1010 slyA CDS COG1846 1862054 1862491 + [K] Transcriptional regulators 1011 cds-WP_014538955.1 CDS COG3133 1862528 1862995 - [M] Outer membrane lipoprotein 1012 anmK CDS COG2377 1863279 1864394 + [O] Predicted molecular chaperone distantly related to 1013 pdxH CDS COG0259 1864552 1865208 + [H] Pyridoxamine-phosphate oxidase tyrS CDS COG0162 1865338 1866612 + [J] Tyrosyl-tRNA synthetase pdxY CDS COG2240 1866688 1867548 + [H] Pyridoxal/pyridoxine/pyridoxamine kinase 1014 gstA CDS COG0625 1867597 1868202 - [O] Glutathione S-transferase 1015 cds-WP_012668180.1 CDS NA 1868549 1868818 + NA 1016 dtpA CDS COG3104 1868858 1870336 - [E] Dipeptide/tripeptide permease 1017 betI CDS COG1309 1870887 1871486 + [K] Transcriptional regulator betB CDS COG1012 1871504 1872961 + [C] NAD-dependent aldehyde dehydrogenases betA CDS COG2303 1873007 1874647 + [E] Choline dehydrogenase and related flavoproteins 1018 nth CDS COG0177 1874748 1875383 - [L] Predicted EndoIII-related endonuclease cds-WP_012668174.1 CDS COG4660 1875380 1876081 - [C] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE rsxG CDS COG4659 1876074 1876706 - [C] Predicted NADH:ubiquinone oxidoreductase, subunit RnfG rsxD CDS COG4658 1876706 1877767 - [C] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD rsxC CDS COG4656 1877768 1880107 - [C] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC rsxB CDS COG2878 1880100 1880675 - [C] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB rsxA CDS COG4657 1880675 1881256 - [C] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 1019 cds-WP_012668169.1 CDS NA 1881385 1881825 - NA 1020 cds-WP_012668167.1 CDS NA 1882606 1882812 + NA 1021 araA CDS COG2160 1882982 1884478 - [G] L-arabinose isomerase cds-WP_012668165.1 CDS COG1069 1884482 1886173 - [C] Ribulose kinase 1022 cds-WP_012668164.1 CDS COG4213 1886535 1887518 + [G] ABC-type xylose transport system, periplasmic component araG CDS COG1129 1887595 1889115 + [G] ABC-type sugar transport system, ATPase component araH CDS COG1172 1889133 1890113 + [G] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components araC CDS COG2207 1890125 1891021 + [K] AraC-type DNA-binding domain-containing proteins cds-WP_012668160.1 CDS COG0673 1891114 1892154 + [R] Predicted dehydrogenases and related proteins 1023 add CDS COG1816 1892223 1893218 - [F] Adenosine deaminase 1024 cds-WP_012668158.1 CDS COG5339 1893379 1894875 - [S] Uncharacterized protein conserved in bacteria 1025 fumC CDS COG0114 1895279 1896676 + [C] Fumarase 1026 tus CDS NA 1896740 1897669 - NA 1027 cds-WP_012668155.1 CDS ROG4515 1897915 1898712 + NA 1028 cds-WP_012668154.1 CDS COG0477 1898839 1900107 - [GEPR] Permeases of the major facilitator superfamily 1029 cds-WP_012668153.1 CDS COG0583 1900210 1901109 + [K] Transcriptional regulator 1030 cds-WP_012668152.1 CDS COG1940 1901276 1902493 + [KG] Transcriptional regulator/sugar kinase 1031 bioD_2 CDS COG0132 1902612 1903274 + [H] Dethiobiotin synthetase 1032 cds-WP_012668150.1 CDS COG2211 1903640 1905106 + [G] Na+/melibiose symporter and related transporters 1033 cds-WP_014538936.1 CDS COG2913 1905150 1905446 - [J] Small protein A (tmRNA-binding) cds-WP_012668148.1 CDS NA 1905495 1905842 - NA 1034 ydfG CDS COG4221 1906010 1906759 - [R] Short-chain alcohol dehydrogenase of unknown specificity 1035 guaD CDS COG0402 1907137 1908468 + [FR] Cytosine deaminase and related metal-dependent hydrolases 1036 dcp CDS COG0339 1908727 1910862 + [E] Zn-dependent oligopeptidases 1037 hpxO CDS COG0654 1910914 1912071 - [HC] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 1038 cds-WP_012668143.1 CDS ROG2379 1912328 1912960 + NA 1039 cds-WP_012668142.1 CDS NA 1913269 1914480 + NA cds-WP_012668141.1 CDS COG2707 1914499 1914711 + [S] Predicted membrane protein cds-WP_014538931.1 CDS NA 1914692 1915117 + NA 1040 cds-WP_012668139.1 CDS COG0334 1915187 1916461 - [E] Glutamate dehydrogenase/leucine dehydrogenase 1041 cds-WP_012668138.1 CDS COG3007 1917011 1918210 + [S] Uncharacterized paraquat-inducible protein B 1042 cds-CPI84_RS09410 CDS COG2141 1918476 1918949 + [C] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and 1043 cds-WP_012668137.1 CDS NA 1919185 1920504 - NA 1044 cds-WP_012668136.1 CDS COG4771 1920845 1923232 + [P] Outer membrane receptor for ferrienterochelin and 1045 cds-WP_012668135.1 CDS COG3526 1923268 1923564 - [O] Uncharacterized protein conserved in bacteria cds-CPI84_RS09430 CDS NA 1923615 1924276 - NA cds-WP_012668133.1 CDS COG1309 1924284 1924916 - [K] Transcriptional regulator 1046 cds-WP_012668132.1 CDS ROG1385 1925022 1925684 + NA 1047 cds-WP_012668131.1 CDS ROG6952 1925749 1927152 - NA 1048 cds-WP_012668130.1 CDS ROG6708 1927800 1928009 + NA 1049 cds-WP_012668129.1 CDS COG0454 1928124 1928600 + [KR] Histone acetyltransferase HPA2 and related acetyltransferases 1050 cds-WP_012668128.1 CDS ROG2464 1928607 1928792 - NA 1051 cds-WP_012668127.1 CDS COG2503 1928937 1929686 + [R] Predicted secreted acid phosphatase 1052 cds-WP_041473998.1 CDS COG0753 1929768 1931240 - [P] Catalase 1053 cds-WP_012668125.1 CDS COG2161 1931454 1931675 + [D] Antitoxin of toxin-antitoxin stability system cds-WP_014538918.1 CDS COG3654 1931672 1932043 + [R] Prophage maintenance system killer protein 1054 cds-CPI84_RS09490 CDS ROG1506 1932190 1932666 + NA 1055 cds-WP_014538915.1 CDS COG0840 1933038 1934975 + [NT] Methyl-accepting chemotaxis protein 1056 cds-WP_012668121.1 CDS COG0288 1935117 1935752 + [P] Carbonic anhydrase 1057 cds-WP_012668120.1 CDS ROG2172 1935841 1936290 - NA cds-WP_014538914.1 CDS NA 1936277 1936432 - NA 1058 mqo CDS COG0579 1936742 1938397 + [R] Predicted dehydrogenase 1059 cds-WP_012668118.1 CDS ROG3771 1938497 1938931 - NA 1060 cds-WP_012666458.1-7 CDS COG3335 1939391 1940431 + [L] Transposase and inactivated derivatives 1061 cds-WP_012668117.1 CDS ROG5046 1940501 1941865 + NA cds-WP_041473997.1 CDS COG4457 1941880 1944852 + [S] Uncharacterized protein conserved in bacteria, putative cds-WP_012668115.1 CDS COG4458 1944849 1947248 + [S] Uncharacterized protein conserved in bacteria, putative 1062 cds-WP_012668114.1 CDS COG2732 1947408 1947680 - [K] Barstar, RNAse (barnase) inhibitor cds-WP_012668113.1 CDS ROG3767 1947682 1948152 - NA 1063 cds-WP_012668112.1 CDS NA 1948286 1949305 - NA 1064 cds-WP_014538912.1 CDS NA 1949617 1950075 + NA 1065 cds-WP_012668110.1 CDS COG2207 1950331 1950672 + [K] AraC-type DNA-binding domain-containing proteins 1066 glsB CDS COG2066 1950723 1951649 - [E] Glutaminase 1067 cds-WP_012668108.1 CDS COG2814 1951920 1953104 + [G] Arabinose efflux permease 1068 cds-WP_012668107.1 CDS COG0747 1953348 1954946 - [E] ABC-type dipeptide transport system, periplasmic component 1069 pepT CDS COG2195 1955165 1956403 + [E] Di- and tripeptidases 1070 cds-WP_012668105.1 CDS NA 1956531 1957589 - NA 1071 cds-WP_012668104.1 CDS NA 1957705 1959138 - NA 1072 cds-WP_012668103.1 CDS NA 1959496 1963329 - NA 1073 cds-WP_012668102.1 CDS COG0840 1963544 1965178 - [NT] Methyl-accepting chemotaxis protein 1074 cds-CPI84_RS09610 CDS COG2272 1965373 1966898 - [I] Carboxylesterase type B 1075 cds-WP_014538909.1 CDS ROG2472 1966997 1968325 - NA 1076 cds-WP_012668099.1 CDS ROG3882 1968899 1969942 - NA 1077 cds-WP_012668098.1 CDS COG1621 1970573 1972105 + [G] Beta-fructosidases (levanase/invertase) 1078 cds-WP_012668097.1 CDS COG0664 1972451 1973206 + [T] cAMP-binding proteins - catabolite gene activator uspE CDS COG0589 1973323 1974273 + [T] Universal stress protein UspA and related 1079 cds-WP_014538907.1 CDS ROG8050 1974431 1974910 + NA 1080 cds-WP_014538906.1 CDS COG4771 1975122 1977104 + [P] Outer membrane receptor for ferrienterochelin and cds-WP_012668093.1 CDS COG3090 1977128 1977394 + [G] TRAP-type C4-dicarboxylate transport system, small permease 1081 ydgH CDS NA 1977981 1978931 + NA 1082 cds-WP_012668091.1 CDS COG0531 1979139 1980533 + [E] Amino acid transporters 1083 cds-WP_012668090.1 CDS NA 1980534 1980998 - NA 1084 rstA CDS COG0745 1981186 1981914 + [TK] Response regulators consisting of a CheY-like 1085 cds-WP_012668088.1 CDS COG1598 1982192 1982452 + [S] Uncharacterized conserved protein cds-WP_071819813.1 CDS COG1835 1982502 1982735 + [I] Predicted acyltransferases cds-WP_012668087.1 CDS COG1835 1982669 1983514 + [I] Predicted acyltransferases 1086 cds-CPI84_RS09705 CDS COG1598 1983925 1984184 + [S] Uncharacterized conserved protein cds-WP_012668085.1 CDS COG1835 1984223 1985338 + [I] Predicted acyltransferases 1087 cds-WP_012668084.1 CDS COG4675 1985359 1986294 - [S] Microcystin-dependent protein cds-WP_012668083.1 CDS NA 1986298 1986951 - NA cds-WP_012668082.1 CDS COG3299 1986948 1988135 - [S] Uncharacterized homolog of phage Mu protein cds-WP_012668081.1 CDS NA 1988128 1988472 - NA cds-WP_012668080.1 CDS ROG6302 1988469 1989161 - NA cds-WP_012668079.1 CDS ROG4832 1989165 1989980 - NA cds-WP_012668078.1 CDS NA 1989973 1990266 - NA cds-WP_012668077.1 CDS NA 1990273 1990782 - NA cds-WP_012668076.1 CDS ROG7110 1990779 1992455 - NA 1088 cds-WP_012668075.1 CDS NA 1992538 1992996 - NA cds-WP_012668074.1 CDS NA 1993038 1993490 - NA cds-WP_012668073.1 CDS NA 1993501 1994988 - NA cds-WP_012668072.1 CDS NA 1995003 1995518 - NA cds-WP_012668071.1 CDS NA 1995508 1995876 - NA cds-WP_012668070.1 CDS ROG3115 1995876 1996334 - NA cds-WP_014538898.1 CDS NA 1996331 1996771 - NA cds-WP_012668068.1 CDS NA 1996768 1997112 - NA cds-CPI84_RS09800 CDS ROG0552 1997155 1997778 - NA 1089 cds-WP_012668066.1 CDS NA 1997911 1998318 - NA cds-WP_012668065.1 CDS COG3179 1998315 1998938 - [R] Predicted chitinase cds-WP_012668064.1 CDS NA 1998942 1999277 - NA 1090 cds-WP_012668063.1 CDS NA 1999449 2000135 - NA cds-WP_012668062.1 CDS NA 2000135 2000614 - NA cds-WP_012668061.1 CDS NA 2000611 2001210 - NA 1091 cds-WP_071819811.1 CDS NA 2001813 2001968 - NA 1092 cds-WP_012668058.1 CDS ROG4584 2002149 2002391 - NA cds-WP_104945197.1 CDS NA 2002393 2003190 - NA cds-WP_012668056.1 CDS ROG7188 2003141 2004049 - NA cds-WP_012668055.1 CDS NA 2004046 2004513 - NA cds-WP_012668054.1 CDS NA 2004510 2004713 - NA 1093 cds-WP_012668053.1 CDS COG2932 2004797 2005198 + [K] Predicted transcriptional regulator 1094 cds-CPI84_RS09885 CDS NA 2005375 2005591 + NA 1095 cds-CPI84_RS09890 CDS NA 2005725 2005920 + NA 1096 cds-WP_012668051.1 CDS ROG7827 2005993 2006268 + NA 1097 cds-WP_012668050.1 CDS NA 2006351 2006605 + NA cds-WP_012668049.1 CDS NA 2006607 2008850 + NA cds-WP_012668048.1 CDS ROG2745 2008847 2009410 + NA 1098 rstB CDS COG2205 2009776 2011056 + [T] Osmosensitive K+ channel histidine kinase cds-WP_012668046.1 CDS COG2317 2011072 2012556 + [E] Zn-dependent carboxypeptidase 1099 asr CDS NA 2012882 2013265 + NA 1100 cds-WP_012668044.1 CDS COG3591 2013553 2014359 + [E] V8-like Glu-specific endopeptidase 1101 cds-WP_012668043.1 CDS COG3023 2014450 2015319 + [V] Negative regulator of beta-lactamase expression 1102 hrpA CDS COG1643 2015359 2019261 - [L] HrpA-like helicases 1103 cds-WP_012668041.1 CDS COG1182 2019493 2020098 + [I] Acyl carrier protein phosphodiesterase 1104 cds-WP_012668040.1 CDS NA 2020188 2021261 - NA 1105 cds-WP_012668039.1 CDS COG3784 2021492 2021827 - [S] Uncharacterized protein conserved in bacteria cds-WP_014538888.1 CDS ROG0130 2021837 2022028 - NA cds-WP_012668037.1 CDS ROG3879 2022012 2024642 - NA 1106 cds-WP_012668036.1 CDS COG1052 2024834 2025826 + [CHR] Lactate dehydrogenase and related dehydrogenases 1107 cds-WP_012668035.1 CDS COG3042 2025929 2026201 - [R] Putative hemolysin 1108 cds-WP_012668034.1 CDS COG1359 2026499 2026786 + [S] Uncharacterized conserved protein 1109 dbpA CDS COG0513 2026861 2028240 - [LKJ] Superfamily II DNA and RNA helicases 1110 ttcA CDS COG0037 2029148 2030080 + [D] Predicted ATPase of the PP-loop superfamily 1111 cds-WP_012668030.1 CDS COG0366 2030208 2032007 - [G] Glycosidases 1112 zntB CDS COG0598 2032308 2033291 - [P] Mg2+ and Co2+ transporters 1113 cds-WP_014538885.1 CDS NA 2033801 2034493 + NA 1114 cds-WP_014538884.1 CDS COG3121 2034583 2035287 + [NU] P pilus assembly protein, chaperone PapD cds-WP_012668026.1 CDS COG3188 2035290 2037701 + [NU] P pilus assembly protein, porin PapC cds-WP_012668025.1 CDS NA 2037711 2038301 + NA 1115 cds-WP_012668023.1 CDS COG0645 2038740 2039246 - [R] Predicted kinase 1116 cds-WP_012668022.1 CDS COG4166 2039332 2040948 - [E] ABC-type oligopeptide transport system, periplasmic component 1117 ycjG CDS COG4948 2041092 2042081 - [MR] L-alanine-DL-glutamate epimerase and related enzymes of 1118 tpx CDS COG2077 2042199 2042702 + [O] Peroxiredoxin 1119 tyrR CDS COG3283 2042755 2044320 - [KE] Transcriptional regulator of aromatic amino acids cds-WP_012668018.1 CDS COG3768 2044419 2045477 - [S] Predicted membrane protein cds-WP_012668017.1 CDS COG3106 2045474 2046871 - [R] Predicted ATPase pspD CDS NA 2046912 2047121 - NA pspC CDS COG1983 2047139 2047486 - [KT] Putative stress-responsive transcriptional regulator pspB CDS ROG0730 2047483 2047710 - NA 1120 pspA CDS COG1842 2047775 2048446 - [KT] Phage shock protein A (IM30), suppresses 1121 pspF CDS COG1221 2048615 2049607 + [KT] Transcriptional regulators containing an AAA-type ATPase 1122 sapA CDS COG0747 2050717 2052345 + [E] ABC-type dipeptide transport system, periplasmic component sapB CDS COG4168 2052342 2053307 + [V] ABC-type antimicrobial peptide transport system, permease sapC CDS COG4171 2053294 2054184 + [V] ABC-type antimicrobial peptide transport system, permease sapD CDS COG4170 2054184 2055176 + [V] ABC-type antimicrobial peptide transport system, ATPase sapF CDS COG4167 2055176 2055973 + [V] ABC-type antimicrobial peptide transport system, ATPase 1123 cds-WP_012668005.1 CDS COG4950 2056442 2057590 + [S] Uncharacterized protein conserved in bacteria 1124 cds-WP_012668004.1 CDS COG0583 2057587 2058489 - [K] Transcriptional regulator 1125 cds-WP_012668003.1 CDS ROG3273 2058764 2060653 + NA 1126 cds-CPI84_RS10155 CDS COG0243 2061092 2063397 + [C] Anaerobic dehydrogenases, typically selenocysteine-containing 1127 cds-WP_012668000.1 CDS COG4776 2063482 2065425 + [K] Exoribonuclease II 1128 araD CDS COG0235 2065490 2066206 - [G] Ribulose-5-phosphate 4-epimerase and related epimerases and 1129 osmB CDS ROG6708 2066690 2066905 + NA 1130 yciH CDS COG0023 2067516 2067842 - [J] Translation initiation factor 1 (eIF-1/SUI1) and pyrF CDS COG0284 2067842 2068558 - [F] Orotidine-5'-phosphate decarboxylase 1131 lapB CDS COG2956 2068801 2069970 - [G] Predicted N-acetylglucosaminyl transferase cds-WP_012667994.1 CDS COG3771 2069974 2070285 - [S] Predicted membrane protein 1132 pgpB CDS COG0671 2070461 2071225 - [I] Membrane-associated phospholipid phosphatase 1133 ribA CDS COG0807 2071452 2072042 + [H] GTP cyclohydrolase II 1134 acnA CDS COG1048 2072103 2074784 - [C] Aconitase A 1135 cds-WP_071819574.1 CDS COG0738 2075444 2075602 - [G] Fucose permease 1136 cysB CDS COG0583 2076081 2077055 - [K] Transcriptional regulator 1137 topA CDS COG0550 2077267 2079864 - [L] Topoisomerase IA 1138 sohB CDS COG0616 2080399 2081448 - [OU] Periplasmic serine proteases (ClpP class) 1139 cds-WP_012667986.1 CDS COG1028 2081662 2082429 + [IQR] Dehydrogenases with different specificities (related to 1140 rluB CDS COG1187 2082579 2083466 - [J] 16S rRNA uridine-516 pseudouridylate synthase and 1141 cds-WP_012667984.1 CDS NA 2083931 2084848 - NA 1142 cds-WP_012667983.1 CDS COG0009 2085223 2085843 - [J] Putative translation factor (SUA5) cds-WP_012667982.1 CDS COG0613 2085843 2086754 - [R] Predicted metal-dependent phosphoesterases (PHP family) 1143 cds-WP_012667981.1 CDS COG0147 2087032 2088594 + [EH] Anthranilate/para-aminobenzoate synthases component I cds-WP_012667980.1 CDS COG0512 2088594 2089172 + [EH] Anthranilate/para-aminobenzoate synthases component II trpD CDS COG0547 2089187 2090185 + [E] Anthranilate phosphoribosyltransferase trpCF CDS COG0134 2090188 2091549 + [E] Indole-3-glycerol phosphate synthase trpB CDS COG0133 2091564 2092754 + [E] Tryptophan synthase beta chain trpA CDS COG0159 2092754 2093560 + [E] Tryptophan synthase alpha chain 1144 cds-WP_014538873.1 CDS COG2823 2093717 2094031 + [R] Predicted periplasmic or secreted lipoprotein 1145 ompW CDS COG3047 2094139 2094771 - [M] Outer membrane protein W 1146 cds-WP_012667973.1 CDS ROG3022 2095143 2095880 + NA 1147 cds-WP_012667972.1 CDS COG2917 2095957 2096493 + [D] Intracellular septation protein A yciA CDS COG1607 2096565 2096993 + [I] Acyl-CoA hydrolase 1148 tonB CDS COG0810 2097067 2097780 - [M] Periplasmic protein TonB, links inner and 1149 cds-WP_012667969.1 CDS COG2350 2097985 2098281 + [S] Uncharacterized protein conserved in bacteria 1150 cds-WP_014538870.1 CDS NA 2098327 2098440 - NA 1151 cls CDS COG1502 2098632 2100092 + [I] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes cds-WP_012667967.1 CDS COG3099 2100140 2100463 + [S] Uncharacterized protein conserved in bacteria 1152 oppF CDS COG4608 2100562 2101563 - [E] ABC-type oligopeptide transport system, ATPase component cds-WP_012667965.1 CDS COG0444 2101560 2102576 - [EP] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component oppC CDS COG1173 2102588 2103496 - [EP] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components oppB CDS COG0601 2103511 2104431 - [EP] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components oppA CDS COG4166 2104517 2106148 - [E] ABC-type oligopeptide transport system, periplasmic component cds-WP_012667961.1 CDS COG4166 2106322 2107956 - [E] ABC-type oligopeptide transport system, periplasmic component 1153 cds-WP_012666458.1-8 CDS COG3335 2108675 2109715 + [L] Transposase and inactivated derivatives 1154 cds-WP_012667960.1 CDS COG2095 2109730 2110377 - [U] Multiple antibiotic transporter 1155 cds-WP_012667959.1 CDS COG2010 2110507 2111172 + [C] Cytochrome c, mono- and diheme variants 1156 tdk CDS COG1435 2111509 2112126 - [F] Thymidine kinase 1157 hns CDS COG2916 2112470 2112877 + [R] DNA-binding protein H-NS 1158 cds-WP_012667956.1 CDS COG0451 2113007 2114014 - [MG] Nucleoside-diphosphate-sugar epimerases cds-WP_012667955.1 CDS COG1004 2114029 2115369 - [M] Predicted UDP-glucose 6-dehydrogenase galU CDS COG1210 2115397 2116305 - [M] UDP-glucose pyrophosphorylase 1159 rssB CDS COG2204 2116500 2117513 - [T] Response regulator containing CheY-like receiver, AAA-type 1160 cds-WP_012667952.1 CDS COG3012 2118334 2118795 + [S] Uncharacterized protein conserved in bacteria purU CDS COG0788 2118834 2119682 + [F] Formyltetrahydrofolate hydrolase 1161 rna-CPI84_RS10425 tRNA NA 2119828 2119912 + NA 1162 xthA CDS COG0708 2120239 2121045 + [L] Exonuclease III 1163 cds-WP_012667949.1 CDS NA 2121119 2121421 - NA cds-WP_012667948.1 CDS COG0550 2121418 2123343 - [L] Topoisomerase IA 1164 cds-WP_012667947.1 CDS COG0778 2123507 2124058 - [C] Nitroreductase 1165 sppA CDS COG0616 2124251 2126107 + [OU] Periplasmic serine proteases (ClpP class) ansA CDS COG0252 2126230 2127243 + [EJ] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D pncA CDS COG1335 2127251 2127865 + [Q] Amidases related to nicotinamidase 1166 cds-WP_012667943.1 CDS COG3139 2127937 2128215 - [S] Uncharacterized protein conserved in bacteria msrB CDS COG0229 2128225 2128635 - [O] Conserved domain frequently associated with peptide 1167 gapA CDS COG0057 2128974 2129969 + [G] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 1168 cds-WP_012667940.1 CDS COG0676 2130083 2130961 + [G] Uncharacterized enzymes related to aldose 1-epimerase 1169 cds-WP_014538864.1 CDS COG0667 2131141 2131332 - [C] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 1170 cds-WP_014538862.1 CDS COG3713 2131478 2132266 - [M] Outer membrane protein V 1171 yeaG CDS COG2766 2132781 2134715 + [T] Putative Ser protein kinase cds-WP_012667937.1 CDS COG2718 2134786 2136063 + [S] Uncharacterized conserved protein 1172 cds-WP_012667936.1 CDS COG3263 2137219 2138940 + [P] NhaP-type Na+/H+ and K+/H+ antiporters with 1173 wbaP CDS COG2148 2139375 2140844 + [M] Sugar transferases involved in lipopolysaccharide synthesis 1174 cds-WP_012667934.1 CDS COG2814 2140995 2142185 + [G] Arabinose efflux permease 1175 dadX CDS COG0787 2142191 2143261 - [M] Alanine racemase cds-WP_012667932.1 CDS COG0665 2143289 2144590 - [E] Glycine/D-amino acid oxidases (deaminating) 1176 cds-WP_012667931.1 CDS COG2719 2145100 2146638 + [S] Uncharacterized conserved protein 1177 fadR CDS COG2186 2146736 2147452 - [K] Transcriptional regulators 1178 dsbB CDS COG1495 2147755 2148285 + [O] Disulfide bond formation protein DsbB 1179 cds-WP_012667928.1 CDS COG2983 2148379 2148828 - [S] Uncharacterized conserved protein cds-WP_012667927.1 CDS COG0179 2148892 2149551 - [Q] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 1180 cds-WP_012667926.1 CDS COG3100 2149866 2150141 - [S] Uncharacterized protein conserved in bacteria 1181 minC CDS COG0850 2150296 2150988 + [D] Septum formation inhibitor minD CDS COG2894 2151030 2151842 + [D] Septum formation inhibitor-activating ATPase minE CDS COG0851 2151846 2152121 + [D] Septum formation topological specificity factor 1182 rnd CDS COG0349 2152174 2153283 - [J] Ribonuclease D fadD CDS COG0318 2153406 2155091 - [IQ] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 1183 cds-WP_012667920.1 CDS COG3065 2155296 2155889 - [M] Starvation-inducible outer membrane lipoprotein tsaB CDS COG1214 2155947 2156648 - [O] Inactive homolog of metal-dependent proteases, putative cds-WP_012667918.1 CDS COG1199 2156710 2158620 - [KL] Rad3-related DNA helicases 1184 cds-WP_012667917.1 CDS ROG6975 2158753 2159097 + NA 1185 cds-WP_012667916.1 CDS COG3140 2159139 2159366 - [S] Uncharacterized protein conserved in bacteria 1186 pabB CDS COG0147 2159481 2160848 + [EH] Anthranilate/para-aminobenzoate synthases component I cds-WP_012667914.1 CDS COG0494 2160838 2161419 + [LR] NTP pyrophosphohydrolases including oxidative damage repair 1187 sdaA CDS COG1760 2161606 2162970 + [E] L-serine deaminase 1188 cds-WP_012667912.1 CDS COG0861 2163015 2164568 - [P] Membrane protein TerC, possibly involved in 1189 rlmA CDS COG0500 2164856 2165674 - [QR] SAM-dependent methyltransferases 1190 cspE_2 CDS COG1278 2165848 2166057 - [K] Cold shock proteins 1191 cds-WP_148217849.1 CDS NA 2166139 2166213 - NA 1192 cds-WP_012667910.1 CDS COG2220 2166720 2167730 - [R] Predicted Zn-dependent hydrolases of the beta-lactamase cds-WP_012667909.1 CDS NA 2167751 2168026 - NA 1193 cds-WP_012667908.1 CDS ROG3618 2168254 2168490 + NA 1194 htpX CDS COG0501 2168687 2169565 - [O] Zn-dependent protease with chaperone function 1195 prc CDS COG0793 2169787 2171802 - [M] Periplasmic protease proQ CDS COG3109 2171822 2172514 - [T] Activator of osmoprotectant transporter ProP cds-WP_012667904.1 CDS COG1956 2172611 2173111 - [T] GAF domain-containing protein 1196 yebS CDS COG2995 2173298 2174566 + [S] Uncharacterized paraquat-inducible protein A cds-WP_014538857.1 CDS COG3008 2174535 2177168 + [R] Paraquat-inducible protein B 1197 rsmF CDS COG0144 2177311 2178747 + [J] tRNA and rRNA cytosine-C5-methylases 1198 cds-WP_012667900.1 CDS NA 2178938 2179231 - NA 1199 cds-WP_012667899.1 CDS COG0421 2179448 2180251 + [E] Spermidine synthase 1200 cds-WP_012667898.1 CDS COG0628 2180359 2181477 + [R] Predicted permease 1201 cds-WP_012667897.1 CDS COG2431 2181654 2182544 - [S] Predicted membrane protein cds-WP_014538856.1 CDS COG4340 2182599 2183267 - [S] Uncharacterized protein conserved in bacteria 1202 cds-WP_012667895.1 CDS ROG3147 2183850 2184890 - NA 1203 cds-WP_012667894.1 CDS NA 2185356 2185691 - NA cds-WP_012667893.1 CDS COG1276 2185741 2185998 - [P] Putative copper export protein 1204 cds-WP_012667892.1 CDS NA 2186205 2186435 + NA 1205 exoX CDS COG0847 2186581 2187246 + [L] DNA polymerase III, epsilon subunit and 1206 cds-WP_012667890.1 CDS COG1770 2187243 2189303 - [E] Protease II 1207 cds-WP_012667889.1 CDS COG1082 2189558 2190370 + [G] Sugar phosphate isomerases/epimerases 1208 cds-WP_012667888.1 CDS COG3141 2190412 2190711 - [S] Uncharacterized protein conserved in bacteria 1209 purT CDS COG0027 2190850 2192028 + [F] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) 1210 zwf CDS COG0364 2192230 2193705 - [G] Glucose-6-phosphate 1-dehydrogenase 1211 pyk CDS COG0469 2194466 2195947 + [G] Pyruvate kinase 1212 cds-WP_012667883.1 CDS COG2814 2196159 2197400 + [G] Arabinose efflux permease 1213 lpxM CDS COG1560 2197453 2198424 - [M] Lauroyl/myristoyl acyltransferase 1214 mepM CDS COG0739 2198563 2199888 - [M] Membrane proteins related to metalloendopeptidases znuA CDS COG4531 2199900 2200859 - [P] ABC-type Zn2+ transport system, periplasmic component/surface 1215 znuC CDS COG1121 2200937 2201695 + [P] ABC-type Mn/Zn transport systems, ATPase component znuB CDS COG1108 2201688 2202473 + [P] ABC-type Mn2+/Zn2+ transport systems, permease components 1216 ruvB CDS COG2255 2202553 2203557 - [L] Holliday junction resolvasome, helicase subunit ruvA CDS COG0632 2203566 2204180 - [L] Holliday junction resolvasome, DNA-binding subunit ruvC CDS COG0817 2204250 2204771 - [L] Holliday junction resolvasome, endonuclease subunit cds-WP_012667874.1 CDS COG0217 2204803 2205546 - [S] Uncharacterized conserved protein 1217 nudB CDS COG1051 2205636 2206070 - [F] ADP-ribose pyrophosphatase aspS CDS COG0173 2206070 2207857 - [J] Aspartyl-tRNA synthetase 1218 cds-WP_014538851.1 CDS COG1801 2208243 2209067 + [S] Uncharacterized conserved protein cds-WP_012667870.1 CDS COG3788 2209154 2209549 + [R] Uncharacterized relative of glutathione S-transferase, MAPEG cmoA CDS COG0500 2209634 2210374 + [QR] SAM-dependent methyltransferases cmoB CDS COG0500 2210374 2211339 + [QR] SAM-dependent methyltransferases 1219 cds-CPI84_RS10870 CDS NA 2211493 2212820 - NA 1220 cutC CDS COG3142 2213294 2214046 - [P] Uncharacterized protein involved in copper resistance 1221 cds-WP_012667864.1 CDS COG1168 2214136 2215275 + [E] Bifunctional PLP-dependent enzyme with beta-cystathionase and 1222 cds-WP_012667863.1 CDS COG3102 2215269 2215838 - [S] Uncharacterized protein conserved in bacteria 1223 argS CDS COG0018 2216176 2217906 + [J] Arginyl-tRNA synthetase 1224 cds-WP_012667861.1 CDS NA 2217974 2218366 - NA flhA CDS COG1298 2218366 2220453 - [NU] Flagellar biosynthesis pathway, component FlhA flhB CDS COG1377 2220446 2221597 - [NU] Flagellar biosynthesis pathway, component FlhB cheZ CDS COG3143 2221760 2222404 - [NT] Chemotaxis protein cheY CDS COG0784 2222418 2222807 - [T] FOG: CheY-like receiver cds-WP_012667856.1 CDS COG2201 2222910 2223959 - [NT] Chemotaxis response regulator containing a CheY-like cheR CDS COG1352 2223959 2224831 - [NT] Methylase of chemotaxis methyl-accepting proteins cds-WP_012667854.1 CDS COG0840 2224868 2226466 - [NT] Methyl-accepting chemotaxis protein cds-WP_012667853.1 CDS COG0840 2226585 2228267 - [NT] Methyl-accepting chemotaxis protein cds-WP_012667852.1 CDS COG0840 2228425 2230089 - [NT] Methyl-accepting chemotaxis protein cds-WP_012667851.1 CDS COG0840 2230168 2231823 - [NT] Methyl-accepting chemotaxis protein cds-WP_012667849.1 CDS COG0840 2232294 2233958 - [NT] Methyl-accepting chemotaxis protein cheW CDS COG0835 2234133 2234630 - [NT] Chemotaxis signal transduction protein cheA CDS COG0643 2234655 2236610 - [NT] Chemotaxis protein histidine kinase and related motB CDS COG1360 2236621 2237652 - [N] Flagellar motor protein motA CDS COG1291 2237649 2238533 - [N] Flagellar motor component 1225 flhC CDS ROG0388 2238668 2239246 - NA flhD CDS ROG0481 2239246 2239599 - NA 1226 otsA CDS COG0380 2240578 2242008 - [G] Trehalose-6-phosphate synthase otsB CDS COG1877 2241983 2242792 - [G] Trehalose-6-phosphatase 1227 cds-WP_012667840.1 CDS ROG3633 2243507 2244238 + NA 1228 umuD CDS COG1974 2244410 2244829 + [KT] SOS-response transcriptional repressors (RecA-mediated autopeptidases) umuC CDS COG0389 2244832 2246094 + [L] Nucleotidyltransferase/DNA polymerase involved in DNA repair 1229 cds-WP_012667837.1 CDS ROG1305 2246173 2247090 - NA cds-WP_012667836.1 CDS ROG0770 2247083 2247856 - NA 1230 hemB CDS COG0113 2248341 2249318 - [H] Delta-aminolevulinic acid dehydratase 1231 cds-WP_041473991.1 CDS COG0431 2249558 2250124 + [R] Predicted flavoprotein 1232 cds-WP_012667833.1 CDS COG0025 2250219 2251553 + [P] NhaP-type Na+/H+ and K+/H+ antiporters 1233 cds-WP_014538840.1 CDS COG2244 2251810 2252172 - [R] Membrane protein involved in the export 1234 cds-WP_012667831.1 CDS COG1457 2252328 2253743 - [F] Purine-cytosine permease and related proteins 1235 cds-WP_012667830.1 CDS COG1012 2253954 2255474 - [C] NAD-dependent aldehyde dehydrogenases 1236 cds-WP_014538839.1 CDS COG0697 2255840 2256715 + [GER] Permeases of the drug/metabolite transporter (DMT) 1237 cds-WP_012667828.1 CDS COG3381 2256731 2257297 - [R] Uncharacterized component of anaerobic dehydrogenases 1238 cds-WP_012667827.1 CDS ROG0946 2257376 2257699 - NA cds-WP_041474105.1 CDS ROG5546 2257699 2257965 - NA 1239 cds-CPI84_RS11075 CDS COG3104 2258110 2258376 - [E] Dipeptide/tripeptide permease 1240 rna-CPI84_RS11080 tRNA NA 2258607 2258694 + NA 1241 phoA CDS COG1785 2259076 2260479 - [P] Alkaline phosphatase 1242 rna-CPI84_RS11095 tRNA NA 2260721 2260808 + NA 1243 cds-WP_012667824.1 CDS COG0778 2261243 2261983 + [C] Nitroreductase 1244 phoH CDS COG1702 2262062 2262850 - [T] Phosphate starvation-inducible protein PhoH, predicted ATPase 1245 efeB CDS COG2837 2263378 2264664 - [P] Predicted iron-dependent peroxidase cds-WP_012667821.1 CDS COG2822 2264671 2265801 - [P] Predicted periplasmic lipoprotein involved in iron cds-WP_012667820.1 CDS COG0672 2265858 2266691 - [P] High-affinity Fe2+/Pb2+ permease 1246 putP CDS COG0591 2266909 2268393 - [ER] Na+/proline symporter 1247 putA CDS COG4230 2268822 2272769 + [C] Delta 1-pyrroline-5-carboxylate dehydrogenase 1248 cds-WP_012667817.1 CDS NA 2272858 2273064 - NA 1249 fliZ CDS NA 2273303 2273827 - NA cds-WP_012667815.1 CDS COG1191 2273869 2274591 - [K] DNA-directed RNA polymerase specialized sigma subunit 1250 cds-WP_012667814.1 CDS NA 2274748 2275716 - NA 1251 cds-WP_012667813.1 CDS COG1344 2275787 2276629 - [N] Flagellin and related hook-associated proteins 1252 fliD CDS COG1345 2276906 2278309 + [N] Flagellar capping protein fliS CDS COG1516 2278327 2278725 + [NUO] Flagellin-specific chaperone FliS fliT CDS ROG0925 2278738 2279106 + NA 1253 amyA CDS NA 2279239 2280741 + NA 1254 cds-WP_012667808.1 CDS COG5633 2280765 2281190 - [R] Predicted periplasmic lipoprotein 1255 cds-WP_012667807.1 CDS NA 2281466 2281789 + NA 1256 cds-WP_012667806.1 CDS COG5475 2281854 2282033 - [S] Uncharacterized small protein 1257 cds-WP_014538829.1 CDS COG2354 2282399 2283310 - [S] Uncharacterized protein conserved in bacteria cds-WP_012667804.1 CDS NA 2283322 2283597 - NA 1258 yedA CDS COG0697 2283759 2284673 + [GER] Permeases of the drug/metabolite transporter (DMT) 1259 vsr CDS COG3727 2284677 2285144 - [L] DNA G:T-mismatch repair endonuclease cds-WP_187298273.1 CDS COG0270 2285226 2286611 - [L] Site-specific DNA methylase 1260 cds-WP_012667800.1 CDS COG1636 2286784 2287443 + [S] Uncharacterized protein conserved in bacteria 1261 cds-WP_012667799.1 CDS COG1418 2287516 2288205 - [R] Predicted HD superfamily hydrolase 1262 cds-WP_012667798.1 CDS NA 2288792 2289448 + NA mtfA CDS NA 2289491 2290272 + NA 1263 rna-CPI84_RS11245 tRNA NA 2290372 2290447 + NA 1264 katG CDS COG0376 2291352 2293544 + [P] Catalase (peroxidase I) 1265 cds-WP_012667793.1 CDS COG0803 2293839 2294750 + [P] ABC-type metal ion transport system, periplasmic cds-WP_012667792.1 CDS COG1121 2294747 2295550 + [P] ABC-type Mn/Zn transport systems, ATPase component sitC CDS COG1108 2295550 2296407 + [P] ABC-type Mn2+/Zn2+ transport systems, permease components cds-WP_012667790.1 CDS COG1108 2296404 2297240 + [P] ABC-type Mn2+/Zn2+ transport systems, permease components 1266 rna-CPI84_RS11280 tRNA NA 2297486 2297561 + NA 1267 cds-WP_148217832.1 CDS COG0582 2297729 2297923 + [L] Integrase 1268 cds-WP_012667789.1 CDS COG1124 2298328 2299752 - [EP] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component cds-WP_014538824.1 CDS COG1173 2299749 2300537 - [EP] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components cds-WP_014538823.1 CDS COG0601 2300549 2301484 - [EP] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components cds-WP_012667786.1 CDS COG0747 2301481 2303004 - [E] ABC-type dipeptide transport system, periplasmic component 1269 cds-WP_012667785.1 CDS NA 2303280 2304044 + NA 1270 cds-WP_012667784.1 CDS COG1309 2304126 2304797 + [K] Transcriptional regulator 1271 cds-WP_012667783.1 CDS COG5597 2305034 2305870 + [M] Alpha-N-acetylglucosamine transferase 1272 cds-WP_012667781.1 CDS COG5434 2306299 2307549 + [M] Endopolygalacturonase 1273 cds-WP_157861014.1 CDS NA 2307678 2307905 + NA 1274 cds-WP_012667780.1 CDS COG1052 2308236 2309162 - [CHR] Lactate dehydrogenase and related dehydrogenases cds-WP_012667779.1 CDS COG0454 2309162 2310010 - [KR] Histone acetyltransferase HPA2 and related acetyltransferases cds-WP_012667778.1 CDS COG0665 2310020 2311351 - [E] Glycine/D-amino acid oxidases (deaminating) 1275 cds-WP_012667777.1 CDS COG1280 2311784 2312383 - [E] Putative threonine efflux protein 1276 cbl CDS COG0583 2312622 2313578 - [K] Transcriptional regulator nac CDS COG0583 2313715 2314632 - [K] Transcriptional regulator 1277 cds-WP_014544554.1 CDS NA 2314819 2315010 + NA 1278 cds-CPI84_RS19965 CDS COG1172 2314924 2315345 - [G] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1279 rna-CPI84_RS11365 tRNA NA 2315592 2315667 + NA 1280 cds-WP_012667773.1 CDS COG0582 2315847 2317064 + [L] Integrase cds-WP_104944977.1-7 CDS COG2963 2317126 2317384 + [L] Transposase and inactivated derivatives cds-WP_104944977.1-7_2 CDS COG4413 2317384 2318276 + [E] Urea transporter 1281 cds-WP_012667772.1 CDS COG2189 2318494 2318943 - [L] Adenine specific DNA methylase Mod 1282 cds-WP_012667771.1 CDS NA 2320393 2320944 + NA 1283 cds-WP_012667770.1 CDS ROG1544 2321149 2321523 - NA cds-WP_014538807.1 CDS NA 2321538 2322383 - NA 1284 cds-WP_014538806.1 CDS ROG5797 2322857 2323141 + NA 1285 cds-WP_012667767.1 CDS NA 2323240 2323815 + NA 1286 cds-WP_104945081.1 CDS COG1204 2323886 2326018 - [R] Superfamily II helicase cds-WP_012667765.1 CDS ROG4354 2326020 2326937 - NA 1287 cds-WP_014538805.1 CDS NA 2327202 2327408 - NA 1288 cds-WP_104944977.1-8 CDS COG2963 2328332 2328590 - [L] Transposase and inactivated derivatives cds-WP_104944977.1-8_2 CDS COG4413 2327440 2328332 - [E] Urea transporter 1289 cds-WP_012667764.1 CDS ROG0251 2330000 2330473 + NA 1290 cds-WP_012667763.1 CDS COG2323 2330688 2331347 + [S] Predicted membrane protein 1291 cds-WP_012667762.1 CDS COG0775 2331764 2333221 + [F] Nucleoside phosphorylase 1292 cds-WP_012667761.1 CDS COG1063 2333771 2334826 + [ER] Threonine dehydrogenase and related Zn-dependent dehydrogenases 1293 cds-WP_012667760.1 CDS COG3284 2334891 2336822 - [QK] Transcriptional activator of acetoin/glycerol metabolism 1294 rna-CPI84_RS11465 tRNA NA 2337310 2337385 + NA 1295 cds-WP_012667759.1 CDS COG1522 2337596 2338069 - [K] Transcriptional regulators 1296 cds-WP_049779060.1 CDS ROG0005 2338193 2338588 + NA cds-WP_012667757.1 CDS ROG2878 2338614 2339036 + NA 1297 cds-WP_012667756.1 CDS COG1541 2339140 2340549 + [H] Coenzyme F390 synthetase cds-WP_012667755.1 CDS COG0115 2340549 2341517 + [EH] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase cds-WP_012667754.1 CDS COG0077 2341538 2342116 + [E] Prephenate dehydratase cds-WP_012667753.1 CDS ROG3446 2342137 2342682 + NA cds-WP_012667752.1 CDS COG2423 2342700 2343701 + [E] Predicted ornithine cyclodeaminase, mu-crystallin homolog cds-WP_012667751.1 CDS COG1280 2343704 2344330 + [E] Putative threonine efflux protein 1298 cds-WP_012667750.1 CDS COG1902 2345038 2346138 + [C] NADH:flavin oxidoreductases, Old Yellow Enzyme family 1299 cds-WP_012667748.1 CDS COG0534 2346455 2347924 - [V] Na+-driven multidrug efflux pump 1300 cds-WP_012667747.1 CDS COG2926 2348174 2348491 - [S] Uncharacterized protein conserved in bacteria 1301 cds-WP_012667746.1 CDS COG1289 2348652 2349710 - [S] Predicted membrane protein 1302 cds-WP_012667745.1 CDS NA 2350200 2350460 - NA 1303 sbcB CDS COG2925 2350851 2352278 + [L] Exonuclease I 1304 cds-WP_014538798.1 CDS COG0531 2352365 2353735 - [E] Amino acid transporters 1305 cds-WP_012667742.1 CDS COG0451 2354282 2355109 - [MG] Nucleoside-diphosphate-sugar epimerases 1306 hisL CDS NA 2355287 2355334 + NA 1307 hisG CDS COG0040 2355501 2356400 + [E] ATP phosphoribosyltransferase hisD CDS COG0141 2356405 2357712 + [E] Histidinol dehydrogenase hisC CDS COG0079 2357709 2358800 + [E] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase hisB CDS COG0131 2358797 2359864 + [E] Imidazoleglycerol-phosphate dehydratase hisH CDS COG0118 2359864 2360454 + [E] Glutamine amidotransferase hisA CDS COG0106 2360459 2361196 + [E] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase hisF CDS COG0107 2361178 2361954 + [E] Imidazoleglycerol-phosphate synthase hisIE CDS COG0139 2361948 2362559 + [E] Phosphoribosyl-AMP cyclohydrolase 1308 cds-WP_012667733.1 CDS COG2606 2362615 2363088 + [S] Uncharacterized conserved protein 1309 cds-WP_104945083.1 CDS COG0834 2363167 2363961 + [ET] ABC-type amino acid transport/signal transduction systems, 1310 cds-WP_012667731.1 CDS COG3608 2364019 2365134 + [R] Predicted deacylase 1311 gndA CDS COG0362 2365184 2366590 - [G] 6-phosphogluconate dehydrogenase 1312 cds-WP_012667729.1 CDS ROG4745 2366924 2368372 + NA 1313 cds-WP_012667728.1 CDS COG0438 2368423 2369550 - [M] Glycosyltransferase cds-WP_014538793.1 CDS COG1216 2369564 2370469 - [R] Predicted glycosyltransferases glf CDS COG0562 2370457 2371611 - [M] UDP-galactopyranose mutase cds-WP_012667725.1 CDS ROG1617 2371620 2373512 - NA cds-WP_012667724.1 CDS COG1134 2373537 2374277 - [GM] ABC-type polysaccharide/polyol phosphate transport system, ATPase cds-WP_012667723.1 CDS COG1682 2374277 2375044 - [GM] ABC-type polysaccharide/polyol phosphate export systems, permease cds-WP_012667722.1 CDS COG0451 2375117 2376052 - [MG] Nucleoside-diphosphate-sugar epimerases rfbA CDS COG1209 2376171 2377037 - [M] dTDP-glucose pyrophosphorylase rfbB CDS COG1088 2377039 2378109 - [M] dTDP-D-glucose 4,6-dehydratase galE CDS COG1087 2378503 2379516 - [M] UDP-glucose 4-epimerase galF CDS COG1210 2379571 2380467 - [M] UDP-glucose pyrophosphorylase cds-WP_012667717.1 CDS COG2244 2380615 2381955 - [R] Membrane protein involved in the export cds-WP_012667716.1 CDS COG0438 2381952 2383175 - [M] Glycosyltransferase wcaK CDS COG2327 2383180 2384427 - [S] Uncharacterized conserved protein 1314 cds-WP_014538792.1 CDS NA 2384578 2386809 - NA 1315 cds-WP_012667713.1 CDS COG0463 2386892 2387692 - [M] Glycosyltransferases involved in cell wall biogenesis cds-WP_012667712.1 CDS COG0438 2387705 2388760 - [M] Glycosyltransferase 1316 cds-WP_012667711.1 CDS NA 2388928 2390055 - NA cds-WP_012667710.1 CDS COG0463 2390087 2390992 - [M] Glycosyltransferases involved in cell wall biogenesis cds-WP_014538791.1 CDS COG3206 2391082 2393262 - [M] Uncharacterized protein involved in exopolysaccharide biosynthesis cds-WP_012667708.1 CDS COG0394 2393275 2393709 - [T] Protein-tyrosine-phosphatase cds-WP_187298253.1 CDS COG1596 2393725 2394858 - [M] Periplasmic protein involved in polysaccharide export wbaP_2 CDS COG2148 2394980 2396413 - [M] Sugar transferases involved in lipopolysaccharide synthesis 1317 cds-WP_012667705.1 CDS COG0861 2397208 2398773 + [P] Membrane protein TerC, possibly involved in 1318 asmA CDS COG2982 2398861 2400708 - [M] Uncharacterized protein involved in outer membrane 1319 dcd CDS COG0717 2400825 2401406 - [F] Deoxycytidine deaminase udk CDS COG0572 2401432 2402073 - [F] Uridine kinase 1320 cds-WP_012667701.1 CDS COG0671 2402370 2402999 + [I] Membrane-associated phospholipid phosphatase 1321 yegD CDS ROG0810 2403241 2404593 + NA 1322 cds-WP_012667699.1 CDS COG0667 2404634 2405596 - [C] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 1323 cds-WP_012667698.1 CDS NA 2405588 2405788 + NA cds-WP_012667697.1 CDS COG0845 2405848 2407068 + [M] Membrane-fusion protein cds-WP_012667696.1 CDS COG0841 2407068 2410187 + [V] Cation/multidrug efflux pump mdtC CDS COG0841 2410184 2413258 + [V] Cation/multidrug efflux pump baeS CDS COG0642 2413263 2414648 + [T] Signal transduction histidine kinase baeR CDS COG0745 2414663 2415370 + [TK] Response regulators consisting of a CheY-like 1324 cds-WP_012667692.1 CDS NA 2416021 2416431 + NA 1325 cds-WP_012667691.1 CDS NA 2416545 2417450 + NA 1326 yegS CDS COG1597 2417627 2418529 + [IR] Sphingosine kinase and enzymes related to 1327 thiD CDS COG0351 2418626 2419426 - [H] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase thiM CDS COG2145 2419423 2420214 - [H] Hydroxyethylthiazole kinase, sugar kinase family 1328 cds-WP_187298254.1 CDS NA 2420638 2420886 + NA 1329 cds-WP_012667686.1 CDS COG1605 2421268 2421810 - [E] Chorismate mutase 1330 cds-WP_012667685.1 CDS COG0454 2422127 2422549 + [KR] Histone acetyltransferase HPA2 and related acetyltransferases cds-WP_012667684.1 CDS NA 2422586 2422831 + NA 1331 apbC CDS COG0489 2422870 2423982 - [D] ATPases involved in chromosome partitioning 1332 metG CDS COG0143 2424166 2426196 + [J] Methionyl-tRNA synthetase cds-WP_012667681.1 CDS COG1380 2426258 2426653 + [R] Putative effector of murein hydrolase LrgA cds-WP_012667680.1 CDS COG1346 2426646 2427338 + [M] Putative effector of murein hydrolase 1333 cdd CDS COG0295 2427463 2428356 + [F] Cytidine deaminase 1334 cds-WP_012667678.1 CDS COG0281 2428480 2430177 + [C] Malic enzyme 1335 sanA CDS COG2949 2430359 2431072 + [S] Uncharacterized membrane protein 1336 mglC CDS COG4211 2431108 2432132 - [G] ABC-type glucose/galactose transport system, permease component cds-CPI84_RS11905 CDS COG1129 2432152 2433176 - [G] ABC-type sugar transport system, ATPase component cds-CPI84_RS19860 CDS COG1609 2433165 2433439 - [K] Transcriptional regulators 1337 cds-WP_012667674.1 CDS COG2311 2433594 2434754 - [S] Predicted membrane protein 1338 folE CDS COG0302 2434854 2435519 - [H] GTP cyclohydrolase I 1339 cds-WP_012667672.1 CDS COG0583 2435962 2436840 + [K] Transcriptional regulator 1340 cds-WP_187298274.1 CDS COG1062 2436940 2438058 + [C] Zn-dependent alcohol dehydrogenases, class III fghA CDS COG0627 2438070 2438912 + [R] Predicted esterase 1341 cds-WP_012667669.1 CDS COG1120 2438960 2439742 - [PH] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components cds-WP_012667668.1 CDS COG0609 2439742 2440824 - [P] ABC-type Fe3+-siderophore transport system, permease component 1342 cds-WP_012667667.1 CDS COG0833 2440963 2442429 - [E] Amino acid transporters 1343 cds-WP_012667666.1 CDS COG0583 2442596 2443471 - [K] Transcriptional regulator 1344 cds-WP_012667665.1 CDS COG2855 2443633 2444685 + [S] Predicted membrane protein 1345 nfo CDS COG0648 2444751 2445593 + [L] Endonuclease IV 1346 fruA CDS COG1299 2445683 2447371 - [G] Phosphotransferase system, fructose-specific IIC component fruK CDS COG1105 2447388 2448329 - [G] Fructose-1-phosphate kinase and related fructose-6-phosphate kinase fruB CDS COG4668 2448326 2449459 - [G] Mannitol/fructose-specific phosphotransferase system, IIA domain 1347 cds-WP_012667660.1 CDS COG0727 2449784 2450038 - [R] Predicted Fe-S-cluster oxidoreductase 1348 yeiP CDS COG0231 2450217 2450789 + [J] Translation elongation factor P (EF-P)/translation initiation 1349 cds-WP_012667658.1 CDS NA 2450944 2451651 + NA 1350 mepS CDS COG0791 2452144 2452716 + [M] Cell wall-associated hydrolases (invasion-associated proteins) 1351 cds-WP_012667655.1 CDS COG2200 2452999 2454606 + [T] FOG: EAL domain 1352 cds-WP_012667654.1 CDS COG0747 2454694 2456502 + [E] ABC-type dipeptide transport system, periplasmic component cds-WP_012667653.1 CDS COG4174 2456514 2457608 + [R] ABC-type uncharacterized transport system, permease component cds-WP_012667652.1 CDS COG4239 2457605 2458630 + [R] ABC-type uncharacterized transport system, permease component yejF CDS COG4172 2458632 2460215 + [R] ABC-type uncharacterized transport system, duplicated ATPase 1353 cds-WP_012667650.1 CDS NA 2460216 2460566 - NA 1354 cds-WP_012667649.1 CDS COG0477 2460961 2462160 - [GEPR] Permeases of the major facilitator superfamily rsuA CDS COG1187 2462192 2462896 - [J] 16S rRNA uridine-516 pseudouridylate synthase and 1355 cds-WP_012667647.1 CDS COG1061 2463083 2464837 + [KL] DNA or RNA helicases of superfamily 1356 rplY CDS COG1825 2464964 2465248 + [J] Ribosomal protein L25 (general stress protein 1357 yejK CDS COG3081 2465386 2466390 - [R] Nucleoid-associated protein 1358 cds-WP_012667645.1 CDS COG3082 2466558 2466785 + [S] Uncharacterized protein conserved in bacteria yejM CDS COG3083 2466807 2468558 + [R] Predicted hydrolase of alkaline phosphatase superfamily 1359 rna-CPI84_RS12065 tRNA NA 2468634 2468710 + NA 1360 cds-WP_012667643.1 CDS ROG8470 2469043 2469783 + NA cds-WP_012667642.1 CDS ROG0950 2469780 2470598 + NA 1361 cds-CPI84_RS12085 CDS COG3328 2470693 2471040 + [L] Transposase and inactivated derivatives 1362 cds-CPI84_RS12090 CDS NA 2471079 2471907 - NA 1363 cds-WP_012667639.1 CDS NA 2472561 2473571 + NA cds-WP_012667638.1 CDS NA 2473561 2473950 + NA 1364 cds-CPI84_RS12115 CDS NA 2473993 2474288 - NA 1365 cds-WP_012667636.1 CDS NA 2474502 2475500 + NA cds-WP_012667635.1 CDS NA 2475502 2475900 + NA 1366 cds-WP_071819805.1 CDS NA 2475943 2476287 - NA 1367 cds-WP_012667633.1 CDS NA 2476456 2477466 + NA cds-WP_049779072.1 CDS NA 2477420 2477854 + NA 1368 cds-WP_012667631.1 CDS NA 2478919 2479125 + NA 1369 cds-WP_012667630.1 CDS COG2977 2479200 2479928 + [Q] Phosphopantetheinyl transferase component of siderophore synthetase 1370 cds-WP_014538759.1 CDS NA 2479930 2480100 - NA 1371 cds-WP_012667628.1 CDS COG2141 2480302 2481303 + [C] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and cds-WP_012667627.1 CDS COG1473 2481317 2482447 + [R] Metal-dependent amidase/aminoacylase/carboxypeptidase cds-WP_049779071.1 CDS COG0834 2482560 2483444 + [ET] ABC-type amino acid transport/signal transduction systems, cds-WP_012667625.1 CDS COG0454 2483456 2483980 + [KR] Histone acetyltransferase HPA2 and related acetyltransferases cds-WP_014538758.1 CDS COG0765 2483967 2484854 + [E] ABC-type amino acid transport system, permease cds-WP_012667623.1 CDS COG1126 2484857 2485651 + [E] ABC-type polar amino acid transport system, 1372 cds-CPI84_RS12190 CDS COG4615 2485689 2487348 - [QP] ABC-type siderophore export system, fused ATPase alkB CDS COG3145 2487445 2488086 - [L] Alkylated DNA repair protein apbE CDS COG1477 2488106 2489152 - [H] Membrane-associated lipoprotein involved in thiamine biosynthesis 1373 cds-WP_014538754.1 CDS NA 2489597 2489752 + NA 1374 ompC_2 CDS COG3203 2489958 2491064 - [M] Outer membrane protein (porin) 1375 cds-CPI84_RS12210 CDS NA 2492192 2492627 + NA rcsD CDS COG2198 2492643 2495300 + [T] FOG: HPt domain rcsB CDS COG2197 2495302 2495949 + [TK] Response regulator containing a CheY-like receiver 1376 rcsC CDS COG0642 2496102 2498960 - [T] Signal transduction histidine kinase 1377 gyrA CDS COG0188 2499380 2502016 - [L] Type IIA topoisomerase (DNA gyrase/topo II, 1378 ubiG CDS COG2227 2502209 2502940 + [H] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 1379 nrdA CDS COG0209 2503431 2505716 + [F] Ribonucleotide reductase, alpha subunit nrdB CDS COG0208 2505768 2506898 + [F] Ribonucleotide reductase, beta subunit cds-WP_012667609.1 CDS COG0633 2506901 2507161 + [C] Ferredoxin 1380 cds-WP_014538749.1 CDS NA 2507235 2507492 + NA 1381 cds-WP_012667608.1 CDS COG1058 2507639 2508829 - [R] Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis 1382 cds-WP_012667607.1 CDS COG3021 2509001 2510119 - [S] Uncharacterized protein conserved in bacteria 1383 cds-WP_012667606.1 CDS COG0380 2510182 2511603 - [G] Trehalose-6-phosphate synthase 1384 kup CDS COG3158 2512144 2514012 + [P] K+ transporter 1385 elaB CDS COG4575 2514272 2514580 - [S] Uncharacterized conserved protein 1386 cds-WP_012667602.1 CDS COG3131 2514994 2516649 + [P] Periplasmic glucans biosynthesis protein 1387 nuoN CDS COG1007 2517090 2518547 - [C] NADH:ubiquinone oxidoreductase subunit 2 (chain N) nuoM CDS COG1008 2518554 2520074 - [C] NADH:ubiquinone oxidoreductase subunit 4 (chain M) nuoL CDS COG1009 2520287 2522125 - [CP] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit nuoK CDS COG0713 2522122 2522424 - [C] NADH:ubiquinone oxidoreductase subunit 11 or 4L nuoJ CDS COG0839 2522421 2522975 - [C] NADH:ubiquinone oxidoreductase subunit 6 (chain J) nuoI CDS COG1143 2522986 2523528 - [C] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 nuoH CDS COG1005 2523541 2524518 - [C] NADH:ubiquinone oxidoreductase subunit 1 (chain H) nuoG CDS COG1034 2524515 2527241 - [C] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit nuoF CDS COG1894 2527292 2528632 - [C] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit nuoE CDS COG1905 2528629 2529144 - [C] NADH:ubiquinone oxidoreductase 24 kD subunit nuoC CDS COG0649 2529147 2530946 - [C] NADH:ubiquinone oxidoreductase 49 kD subunit 7 cds-WP_012667593.1 CDS COG0377 2531065 2531739 - [C] NADH:ubiquinone oxidoreductase 20 kD subunit and nuoA CDS COG0838 2531757 2532194 - [C] NADH:ubiquinone oxidoreductase subunit 3 (chain A) 1388 lrhA CDS COG0583 2532861 2533790 - [K] Transcriptional regulator 1389 cds-WP_012667591.1 CDS COG0436 2534805 2536022 + [E] Aspartate/tyrosine/aromatic aminotransferase yfbR CDS COG1896 2536084 2536680 + [R] Predicted hydrolases of HD superfamily 1390 cds-WP_104945092.1 CDS NA 2536775 2539321 - NA 1391 cds-WP_104945093.1 CDS NA 2539482 2542028 - NA 1392 cds-WP_012667585.1 CDS COG0637 2543802 2544461 - [R] Predicted phosphatase/phosphohexomutase 1393 cds-WP_012667584.1 CDS COG3092 2544541 2544993 - [S] Uncharacterized protein conserved in bacteria 1394 ackA CDS COG0282 2545316 2546518 + [C] Acetate kinase pta CDS COG0280 2546725 2548869 + [C] Phosphotransacetylase 1395 cds-WP_104945095.1 CDS COG3842 2548962 2550047 - [E] ABC-type spermidine/putrescine transport systems, ATPase components 1396 cds-WP_012667579.1 CDS COG1167 2550317 2551798 - [KE] Transcriptional regulators containing a DNA-binding HTH 1397 cds-WP_104945096.1 CDS COG0160 2551983 2553245 + [E] 4-aminobutyrate aminotransferase and related aminotransferases cds-WP_104945097.1 CDS COG0687 2553303 2554328 + [E] Spermidine/putrescine-binding periplasmic protein cds-WP_104945098.1 CDS COG1176 2554389 2555657 + [E] ABC-type spermidine/putrescine transport system, permease component cds-WP_104945099.1 CDS COG1177 2555668 2556495 + [E] ABC-type spermidine/putrescine transport system, permease component 1398 yfcD CDS COG4119 2556558 2557088 - [LR] Predicted NTP pyrophosphohydrolase 1399 cds-WP_104945101.1 CDS COG1090 2557608 2558501 + [R] Predicted nucleoside-diphosphate sugar epimerase 1400 hisP CDS COG4598 2558597 2559370 - [E] ABC-type histidine transport system, ATPase component cds-WP_012667569.1 CDS COG4160 2559378 2560094 - [E] ABC-type arginine/histidine transport system, permease component cds-WP_012667568.1 CDS COG4215 2560091 2560777 - [E] ABC-type arginine transport system, permease component argT CDS COG0834 2560995 2561777 - [ET] ABC-type amino acid transport/signal transduction systems, 1401 cds-WP_104945104.1 CDS COG0163 2562043 2562618 - [H] 3-polyprenyl-4-hydroxybenzoate decarboxylase purF CDS COG0034 2562687 2564204 - [F] Glutamine phosphoribosylpyrophosphate amidotransferase cvpA CDS COG1286 2564241 2564726 - [R] Uncharacterized membrane protein, required for colicin 1402 dedD CDS COG3147 2565034 2565786 - [S] Uncharacterized protein conserved in bacteria folC CDS COG0285 2565776 2567038 - [H] Folylpolyglutamate synthase accD CDS COG0777 2567104 2568012 - [I] Acetyl-CoA carboxylase beta subunit 1403 cds-CPI84_RS12535 CDS NA 2568317 2572512 - NA 1404 cds-WP_012667559.1 CDS COG0586 2572849 2573508 - [S] Uncharacterized membrane-associated protein truA CDS COG0101 2573539 2574354 - [J] Pseudouridylate synthase cds-WP_104945107.1 CDS COG0136 2574354 2575364 - [E] Aspartate-semialdehyde dehydrogenase pdxB CDS COG0111 2575475 2576626 - [HE] Phosphoglycerate dehydrogenase and related dehydrogenases cds-WP_014538735.1 CDS NA 2576623 2576823 - NA 1405 cds-WP_012667555.1 CDS COG0697 2577052 2577963 + [GER] Permeases of the drug/metabolite transporter (DMT) 1406 flk CDS NA 2578097 2579134 + NA 1407 cds-WP_014538731.1 CDS COG0607 2579136 2579588 - [P] Rhodanese-related sulfurtransferase 1408 cds-CPI84_RS12580 CDS COG1167 2579679 2581113 + [KE] Transcriptional regulators containing a DNA-binding HTH 1409 cds-WP_104945109.1 CDS COG0076 2581224 2582900 - [E] Glutamate decarboxylase and related PLP-dependent proteins 1410 fabB CDS COG0304 2583289 2584512 - [IQ] 3-oxoacyl-(acyl-carrier-protein) synthase 1411 mnmC CDS COG4121 2584669 2586669 + [S] Uncharacterized conserved protein 1412 cds-WP_012667548.1 CDS COG3335 2586827 2587867 + [L] Transposase and inactivated derivatives 1413 cds-WP_157861013.1 CDS ROG3721 2587966 2588124 - NA 1414 cds-WP_012667546.1 CDS NA 2588201 2588623 - NA cds-WP_148217829.1 CDS NA 2588652 2588981 - NA 1415 cds-WP_012667544.1 CDS ROG4992 2589320 2589601 - NA cds-WP_012667543.1 CDS COG3101 2589633 2590181 - [S] Uncharacterized protein conserved in bacteria 1416 cds-WP_012667542.1 CDS COG0730 2590270 2591067 - [R] Predicted permeases mepA CDS COG3770 2591076 2591903 - [M] Murein endopeptidase aroC CDS COG0082 2591908 2592993 - [E] Chorismate synthase prmB CDS COG2890 2593019 2593951 - [J] Methylase of polypeptide chain release factors 1417 smrB CDS COG2840 2594152 2594703 + [S] Uncharacterized protein conserved in bacteria 1418 sixA CDS COG2062 2594788 2595270 - [T] Phosphohistidine phosphatase SixA 1419 fadJ CDS COG1250 2595440 2597587 - [I] 3-hydroxyacyl-CoA dehydrogenase fadI CDS COG0183 2597587 2598897 - [I] Acetyl-CoA acetyltransferase 1420 fadL CDS COG2067 2599364 2600698 + [I] Long-chain fatty acid transport protein 1421 mlaA CDS COG2853 2600774 2601535 - [M] Surface lipoprotein ccmI CDS COG4235 2601575 2602780 - [O] Cytochrome c biogenesis factor cds-WP_012667531.1 CDS COG3088 2602777 2603238 - [O] Uncharacterized protein involved in biosynthesis of cds-WP_012667530.1 CDS COG0526 2603235 2603792 - [OC] Thiol-disulfide isomerase and thioredoxins cds-WP_012667529.1 CDS COG1138 2603789 2605744 - [O] Cytochrome c biogenesis factor ccmE CDS COG2332 2605741 2606223 - [O] Cytochrome c-type biogenesis protein CcmE ccmD CDS COG3114 2606220 2606453 - [U] Heme exporter protein D cds-WP_012667526.1 CDS COG0755 2606450 2607193 - [O] ABC-type transport system involved in cytochrome ccmB CDS COG2386 2607284 2607943 - [O] ABC-type transport system involved in cytochrome ccmA CDS COG4133 2607943 2608557 - [O] ABC-type transport system involved in cytochrome 1422 cds-WP_012667523.1 CDS COG3328 2609110 2610318 - [L] Transposase and inactivated derivatives 1423 cds-WP_012667522.1 CDS NA 2610580 2611371 - NA 1424 cds-WP_104945024.1-3 CDS COG2963 2611518 2611764 + [L] Transposase and inactivated derivatives cds-WP_104945024.1-3_2 CDS NA 2611764 2612653 + NA 1425 cds-CPI84_RS12745 CDS COG3335 2612687 2613028 - [L] Transposase and inactivated derivatives 1426 rna-CPI84_RS12755 tRNA NA 2613217 2613291 - NA 1427 cds-WP_012667520.1 CDS COG0642 2613402 2614661 - [T] Signal transduction histidine kinase cds-WP_012667519.1 CDS COG3915 2614661 2615113 - [S] Uncharacterized protein conserved in bacteria cds-WP_012667518.1 CDS COG0454 2615119 2615550 - [KR] Histone acetyltransferase HPA2 and related acetyltransferases cds-WP_049779070.1 CDS NA 2615560 2616339 - NA 1428 cds-WP_104945110.1 CDS COG2963 2616752 2617010 + [L] Transposase and inactivated derivatives cds-WP_104945110.1_2 CDS COG4413 2617010 2617902 + [E] Urea transporter 1429 cds-WP_104945030.1-3 CDS COG2963 2618839 2619088 - [L] Transposase and inactivated derivatives cds-WP_104945030.1-3_2 CDS NA 2617920 2618839 - NA 1430 cds-CPI84_RS12795 CDS COG2963 2619160 2620169 - [L] Transposase and inactivated derivatives 1431 cds-CPI84_RS12800 CDS COG3328 2620442 2620702 + [L] Transposase and inactivated derivatives 1432 cds-WP_012667511.1 CDS NA 2620788 2627087 - NA 1433 cds-WP_012667510.1 CDS COG0668 2627384 2628628 - [M] Small-conductance mechanosensitive channel 1434 cds-WP_012667509.1 CDS COG3386 2629118 2630002 - [G] Gluconolactonase 1435 cds-WP_012666458.1-9 CDS COG3335 2630501 2631541 - [L] Transposase and inactivated derivatives 1436 cds-WP_012667507.1 CDS COG5633 2631642 2631923 - [R] Predicted periplasmic lipoprotein 1437 cds-WP_014538719.1 CDS NA 2632179 2632988 - NA cds-WP_012667505.1 CDS COG0589 2633033 2633479 - [T] Universal stress protein UspA and related 1438 cds-WP_012667504.1 CDS COG1357 2634039 2635997 + [S] Uncharacterized low-complexity proteins 1439 alaC CDS COG0436 2636133 2637368 - [E] Aspartate/tyrosine/aromatic aminotransferase 1440 cds-CPI84_RS12860 CDS COG3279 2637590 2637880 + [KT] Response regulator of the LytR/AlgR family 1441 glk CDS COG0837 2637908 2638873 - [G] Glucokinase 1442 cds-WP_012667500.1 CDS COG3961 2639039 2640691 - [GHR] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring 1443 cds-WP_012667499.1 CDS COG0667 2640887 2641876 + [C] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 1444 cds-WP_012667497.1 CDS NA 2642104 2642472 + NA 1445 cds-WP_012667496.1 CDS COG1914 2642509 2643750 - [P] Mn2+ and Fe2+ transporters of the 1446 cds-WP_012667495.1 CDS COG1972 2644190 2645374 + [F] Nucleoside permease 1447 rna-CPI84_RS12895 tRNA NA 2645617 2645692 - NA rna-CPI84_RS12900 tRNA NA 2645744 2645819 - NA 1448 cds-WP_012667494.1 CDS COG2116 2646168 2646956 + [P] Formate/nitrite family of transporters 1449 cds-WP_012667493.1 CDS ROG3866 2647109 2647459 + NA 1450 gltX CDS COG0008 2647507 2648916 - [J] Glutamyl- and glutaminyl-tRNA synthetases 1451 rna-CPI84_RS12920 tRNA NA 2649175 2649250 + NA rna-CPI84_RS12925 tRNA NA 2649308 2649383 + NA rna-CPI84_RS12930 tRNA NA 2649415 2649490 + NA rna-CPI84_RS12935 tRNA NA 2649495 2649570 + NA 1452 cds-WP_012667491.1 CDS ROG0421 2650081 2650416 + NA 1453 cds-WP_012667490.1 CDS COG0583 2650413 2651333 - [K] Transcriptional regulator 1454 cds-WP_012667489.1 CDS COG0385 2651428 2652453 + [R] Predicted Na+-dependent transporter 1455 cds-WP_014538713.1 CDS COG3530 2652528 2652746 - [S] Uncharacterized protein conserved in bacteria ligA CDS COG0272 2652724 2654760 - [L] NAD-dependent DNA ligase (contains BRCT domain zipA CDS COG3115 2654826 2655755 - [D] Cell division protein 1456 cysZ CDS COG2981 2655976 2656737 + [E] Uncharacterized protein involved in cysteine biosynthesis 1457 cysK CDS COG0031 2656955 2657926 + [E] Cysteine synthase 1458 cds-WP_041473983.1 CDS NA 2657961 2658245 - NA 1459 ptsH CDS COG1925 2658319 2658576 + [G] Phosphotransferase system, HPr-related proteins ptsI CDS COG1080 2658782 2660509 + [G] Phosphoenolpyruvate-protein kinase (PTS system EI component crr CDS COG2190 2660553 2661056 + [G] Phosphotransferase system IIA components 1460 cds-WP_012667482.1 CDS COG2205 2661171 2662532 - [T] Osmosensitive K+ channel histidine kinase cds-WP_014538710.1 CDS COG0745 2662529 2663209 - [TK] Response regulators consisting of a CheY-like 1461 cysM CDS COG0031 2663392 2664270 - [E] Cysteine synthase cysA CDS COG1118 2664350 2665438 - [P] ABC-type sulfate/molybdate transport systems, ATPase component cysW CDS COG4208 2665428 2666303 - [P] ABC-type sulfate transport system, permease component cysT CDS COG0555 2666303 2667136 - [O] ABC-type sulfate transport system, permease component cds-WP_012667476.1 CDS COG4150 2667136 2668152 - [P] ABC-type sulfate transport system, periplasmic component 1462 cds-WP_012667475.1 CDS COG4785 2668440 2669060 - [R] Lipoprotein NlpI, contains TPR repeats 1463 cds-WP_012667474.1 CDS ROG4313 2669133 2669588 - NA 1464 cds-WP_012667473.1 CDS COG0454 2669673 2670098 - [KR] Histone acetyltransferase HPA2 and related acetyltransferases 1465 amiA CDS COG0860 2670295 2671173 + [M] N-acetylmuramoyl-L-alanine amidase hemF CDS COG0408 2671220 2672128 + [H] Coproporphyrinogen III oxidase 1466 tal CDS COG0176 2672457 2673407 + [G] Transaldolase tkt_2 CDS COG0021 2673479 2675479 + [G] Transketolase 1467 nudK CDS COG0494 2675557 2676138 - [LR] NTP pyrophosphohydrolases including oxidative damage repair 1468 ansP CDS COG1113 2676250 2677698 - [E] Gamma-aminobutyrate permease and related permeases 1469 cds-WP_012667466.1 CDS NA 2678027 2678302 - NA 1470 cds-WP_012667465.1 CDS COG3850 2678659 2679639 + [T] Signal transduction histidine kinase, nitrate/nitrite-specific cds-WP_012667464.1 CDS COG2197 2679657 2680286 + [TK] Response regulator containing a CheY-like receiver 1471 acrD CDS COG0841 2680505 2683618 + [V] Cation/multidrug efflux pump 1472 ypfM CDS NA 2683715 2683774 - NA 1473 cds-WP_012667462.1 CDS ROG0297 2684617 2686218 + NA 1474 cds-WP_012667461.1 CDS NA 2686390 2686584 - NA 1475 cds-WP_012667460.1 CDS COG1393 2687502 2687882 + [P] Arsenate reductase and related proteins, glutaredoxin dapE CDS COG0624 2687885 2689012 + [E] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases cds-WP_012667458.1 CDS COG1459 2689023 2689211 + [NU] Type II secretory pathway, component PulF 1476 cds-WP_012667457.1 CDS COG1020 2689801 2710887 + [Q] Non-ribosomal peptide synthetase modules and related 1477 cds-WP_012667456.1 CDS COG5435 2711176 2711625 + [S] Uncharacterized conserved protein cds-WP_187298256.1 CDS COG3209 2711638 2715897 + [M] Rhs family protein cds-WP_012669373.1-3 CDS ROG6489 2715902 2716354 + NA 1478 cds-WP_012669374.1-3 CDS NA 2716414 2716716 - NA 1479 cds-WP_012669375.1-2 CDS COG2932 2716795 2717196 - [K] Predicted transcriptional regulator 1480 cds-WP_104945112.1 CDS COG0358 2717309 2719987 + [L] DNA primase (bacterial type) xerC_7 CDS COG4974 2720202 2721257 + [L] Site-specific recombinase XerD 1481 cds-WP_012669378.1-3 CDS COG3077 2721518 2721760 + [L] DNA-damage-inducible protein J cds-WP_012669379.1-3 CDS COG2026 2721750 2722034 + [JD] Cytotoxic translational repressor of toxin-antitoxin stability 1482 cds-WP_157861020.1-3 CDS NA 2722536 2722712 - NA 1483 cds-WP_081441632.1-3 CDS NA 2722847 2723029 + NA cds-CPI84_RS13200 CDS COG3209 2723067 2723531 + [M] Rhs family protein cds-WP_012669373.1-4 CDS ROG6489 2723536 2723988 + NA 1484 cds-WP_012669374.1-4 CDS NA 2724048 2724350 - NA 1485 cds-WP_012669375.1-3 CDS COG2932 2724429 2724830 - [K] Predicted transcriptional regulator 1486 cds-WP_012669376.1-3 CDS COG0358 2724943 2727636 + [L] DNA primase (bacterial type) xerC_8 CDS COG4974 2727851 2728906 + [L] Site-specific recombinase XerD 1487 cds-WP_012669378.1-4 CDS COG3077 2729167 2729409 + [L] DNA-damage-inducible protein J cds-WP_012669379.1-4 CDS COG2026 2729399 2729683 + [JD] Cytotoxic translational repressor of toxin-antitoxin stability 1488 cds-WP_157861020.1-4 CDS NA 2730185 2730361 - NA 1489 cds-WP_081441632.1-4 CDS NA 2730496 2730678 + NA 1490 cds-WP_071819801.1 CDS COG3209 2730743 2731177 + [M] Rhs family protein cds-WP_071819843.1 CDS NA 2731188 2731571 + NA 1491 cds-WP_104945113.1 CDS ROG6591 2732544 2732805 - NA cds-WP_104945113.1_2 CDS NA 2731694 2732544 - NA 1492 cds-WP_041473981.1 CDS NA 2732866 2733084 - NA 1493 cds-WP_014538693.1 CDS NA 2733138 2733554 + NA 1494 cds-WP_012667444.1 CDS COG1444 2733607 2735613 - [R] Predicted P-loop ATPase fused to an cds-WP_012667443.1 CDS COG2321 2735620 2736483 - [R] Predicted metalloprotease 1495 cds-WP_014544851.1 CDS COG0152 2736632 2737345 - [F] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 1496 bamC CDS COG3317 2737539 2738570 - [M] Uncharacterized lipoprotein dapA CDS COG0329 2738586 2739464 - [EM] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 1497 cds-WP_012667439.1 CDS COG2716 2739608 2740159 + [E] Glycine cleavage system regulatory protein bcp CDS COG1225 2740233 2740700 + [O] Peroxiredoxin 1498 cds-CPI84_RS13310 CDS COG3706 2740808 2742376 - [T] Response regulator containing a CheY-like receiver 1499 cds-WP_012667436.1 CDS COG4783 2742676 2744142 + [R] Putative Zn-dependent protease, contains TPR repeats arsC CDS COG1393 2744154 2744507 + [P] Arsenate reductase and related proteins, glutaredoxin 1500 hda CDS NA 2744504 2745211 - NA 1501 uraA CDS COG2233 2745358 2746647 - [F] Xanthine/uracil permeases upp CDS COG0035 2746787 2747413 - [F] Uracil phosphoribosyltransferase 1502 purM CDS COG0150 2747657 2748697 + [F] Phosphoribosylaminoimidazole (AIR) synthetase purN CDS COG0299 2748694 2749332 + [F] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 1503 pstB CDS COG1117 2749394 2750170 - [P] ABC-type phosphate transport system, ATPase component pstA CDS COG4985 2750184 2751833 - [P] ABC-type phosphate transport system, auxiliary component cds-WP_012667427.1 CDS COG4590 2751830 2753986 - [R] ABC-type uncharacterized transport system, permease component 1504 ppk1 CDS COG0855 2754131 2756191 + [P] Polyphosphate kinase ppx CDS COG0248 2756197 2757723 + [FP] Exopolyphosphatase tehB CDS COG0500 2757815 2758447 + [QR] SAM-dependent methyltransferases 1505 cds-WP_012667423.1 CDS COG2200 2758437 2760686 - [T] FOG: EAL domain 1506 mgtE CDS COG2239 2761233 2762669 + [P] Mg/Co/Ni transporter MgtE (contains CBS domain) 1507 cds-WP_012667421.1 CDS COG2271 2762904 2764223 + [G] Sugar phosphate permease cds-WP_012667420.1 CDS COG0451 2764241 2765209 + [MG] Nucleoside-diphosphate-sugar epimerases 1508 cds-CPI84_RS13400 CDS ROG0881 2765283 2765750 - NA cds-WP_012667419.1 CDS COG1278 2765747 2766229 - [K] Cold shock proteins 1509 cds-WP_012667418.1 CDS COG0564 2766406 2767104 + [J] Pseudouridylate synthases, 23S RNA-specific 1510 cds-WP_012667417.1 CDS COG3122 2767205 2767744 - [S] Uncharacterized protein conserved in bacteria 1511 cds-CPI84_RS13420 CDS COG4694 2767930 2769741 - [S] Uncharacterized protein conserved in bacteria 1512 cds-WP_104945115.1 CDS ROG6591 2770607 2770868 - NA cds-WP_104945115.1_2 CDS NA 2769757 2770607 - NA 1513 cds-CPI84_RS13430 CDS COG2963 2770953 2771332 - [L] Transposase and inactivated derivatives 1514 cds-WP_012667413.1 CDS NA 2771478 2772461 - NA 1515 cds-WP_104945030.1-4 CDS COG2963 2772753 2773002 + [L] Transposase and inactivated derivatives cds-WP_104945030.1-4_2 CDS NA 2773002 2773921 + NA 1516 cds-WP_012667412.1 CDS COG5293 2773927 2775615 - [S] Uncharacterized protein conserved in bacteria cds-WP_014538677.1 CDS NA 2775602 2775850 - NA cds-WP_012667411.1 CDS ROG4980 2775819 2776799 - NA 1517 cds-WP_012667410.1 CDS COG3093 2777101 2777286 - [R] Plasmid maintenance system antidote protein cds-WP_012667409.1 CDS NA 2777298 2777534 - NA 1518 cds-CPI84_RS13475 CDS COG3846 2777617 2778228 - [U] Type IV secretory pathway, TrbL components cds-CPI84_RS13480 CDS COG0582 2778252 2778569 - [L] Integrase 1519 guaA CDS COG0519 2778874 2780454 - [F] GMP synthase, PP-ATPase domain/subunit guaB CDS COG0516 2780537 2782003 - [F] IMP dehydrogenase/GMP reductase 1520 xseA CDS COG1570 2782174 2783544 + [L] Exonuclease VII, large subunit 1521 cds-WP_012667403.1 CDS COG3227 2783634 2784650 + [E] Zinc metalloprotease (elastase) cds-WP_012667402.1 CDS NA 2784647 2784973 + NA 1522 cds-WP_012667401.1 CDS COG4993 2785033 2787462 - [G] Glucose dehydrogenase 1523 cds-WP_041474096.1 CDS ROG0740 2787779 2788615 + NA 1524 der CDS COG1160 2788783 2790279 - [R] Predicted GTPases bamB CDS COG1520 2790493 2791674 - [S] FOG: WD40-like repeat cds-WP_012667397.1 CDS COG2976 2791803 2792423 - [S] Uncharacterized protein conserved in bacteria hisS CDS COG0124 2792461 2793738 - [J] Histidyl-tRNA synthetase ispG CDS COG0821 2793965 2795086 - [I] Enzyme involved in the deoxyxylulose pathway rodZ CDS COG1426 2795126 2796136 - [S] Uncharacterized protein conserved in bacteria pilW CDS COG3063 2796126 2796857 - [NU] Tfp pilus assembly protein PilF cds-WP_012667392.1 CDS COG0820 2796943 2798112 - [R] Predicted Fe-S-cluster redox enzyme ndk CDS COG0105 2798282 2798713 - [F] Nucleoside diphosphate kinase 1525 sseA CDS COG2897 2799148 2800008 + [P] Rhodanese-related sulfurtransferase 1526 cds-WP_012667390.1 CDS COG2055 2800102 2801103 - [C] Malate/L-lactate dehydrogenases cds-WP_012667389.1 CDS COG1012 2801100 2802689 - [C] NAD-dependent aldehyde dehydrogenases cds-WP_012667388.1 CDS COG2081 2802694 2803971 - [R] Predicted flavoproteins cds-WP_012667387.1 CDS NA 2803964 2804200 - NA cds-WP_012667386.1 CDS COG0665 2804205 2805311 - [E] Glycine/D-amino acid oxidases (deaminating) cds-WP_014538670.1 CDS COG3938 2805311 2806240 - [E] Proline racemase cds-WP_014538669.1 CDS COG1802 2806246 2806938 - [K] Transcriptional regulators cds-WP_014538668.1 CDS COG0329 2807011 2807931 - [EM] Dihydrodipicolinate synthase/N-acetylneuraminate lyase cds-WP_012667382.1 CDS COG0531 2807960 2809576 - [E] Amino acid transporters 1527 sseB CDS ROG1492 2810010 2810789 - NA 1528 pepB CDS COG0260 2810894 2812183 - [E] Leucyl aminopeptidase 1529 cds-WP_012667379.1 CDS COG1104 2812387 2813586 - [E] Cysteine sulfinate desulfinase/cysteine desulfurase and related iscR CDS COG1959 2813726 2814223 - [K] Predicted transcriptional regulator trmJ CDS COG0565 2814381 2815106 - [J] rRNA methylase 1530 suhB CDS COG0483 2815369 2816172 + [G] Archaeal fructose-1,6-bisphosphatase and related enzymes of 1531 cds-WP_012667375.1 CDS COG2215 2816228 2817214 - [R] ABC-type uncharacterized transport system, permease component cds-WP_012667374.1 CDS COG3683 2817205 2817849 - [R] ABC-type uncharacterized transport system, periplasmic component 1532 csiE CDS COG3711 2817984 2819252 + [K] Transcriptional antiterminator 1533 cds-WP_012667372.1 CDS COG0112 2819473 2820726 - [E] Glycine/serine hydroxymethyltransferase 1534 glnB CDS COG0347 2821166 2821504 - [E] Nitrogen regulatory protein PII glrR CDS COG2204 2821640 2822974 - [T] Response regulator containing CheY-like receiver, AAA-type qseG CDS ROG4736 2822971 2823693 - NA cds-CPI84_RS13690 CDS COG0642 2823684 2825123 - [T] Signal transduction histidine kinase 1535 cds-WP_012667367.1 CDS NA 2825405 2826202 + NA 1536 purL CDS COG0046 2826845 2830729 - [F] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 1537 mltF CDS COG4623 2830999 2832480 + [M] Predicted soluble lytic transglycosylase fused to 1538 tadA_2 CDS COG0590 2832448 2832948 - [FJ] Cytosine/adenosine deaminases 1539 yfhb CDS NA 2833109 2833747 - NA 1540 murQ CDS COG2103 2833965 2834870 - [R] Predicted sugar phosphate isomerase 1541 cds-WP_012667361.1 CDS COG1737 2835067 2835906 + [K] Transcriptional regulators 1542 cds-CPI84_RS13735 CDS NA 2836289 2841267 - NA 1543 acpS CDS COG0736 2841503 2841883 - [I] Phosphopantetheinyl transferase (holo-ACP synthase) pdxJ CDS COG0854 2841883 2842614 - [H] Pyridoxal phosphate biosynthesis protein recO CDS COG1381 2842689 2843426 - [L] Recombinational DNA repair protein (RecF pathway) era CDS COG1159 2843432 2844337 - [R] GTPase rnc CDS COG0571 2844334 2845014 - [K] dsRNA-specific ribonuclease lepB CDS COG0681 2845154 2846110 - [U] Signal peptidase I lepA CDS COG0481 2846140 2847939 - [M] Membrane GTPase LepA 1544 cds-WP_012667352.1 CDS NA 2848245 2849108 - NA 1545 cds-WP_012667351.1 CDS NA 2849393 2850169 - NA 1546 rseC CDS COG3086 2850595 2851059 - [T] Positive regulator of sigma E activity rseB CDS COG3026 2851056 2852012 - [T] Negative regulator of sigma E activity rseA CDS COG3073 2852012 2852668 - [T] Negative regulator of sigma E activity rpoE CDS COG1595 2852699 2853274 - [K] DNA-directed RNA polymerase specialized sigma subunit, 1547 nadB CDS COG0029 2853741 2855357 + [H] Aspartate oxidase 1548 cds-WP_014538659.1 CDS COG4123 2855342 2856079 - [R] Predicted O-methyltransferase 1549 srmB CDS COG0513 2856212 2857540 + [LKJ] Superfamily II DNA and RNA helicases 1550 cds-WP_104945118.1 CDS COG3445 2857855 2858139 - [R] Acid-induced glycyl radical enzyme 1551 ung CDS COG0692 2858277 2858960 + [L] Uracil DNA glycosylase 1552 grpE CDS COG0576 2859112 2859696 - [O] Molecular chaperone GrpE (heat shock protein) 1553 nadK CDS COG0061 2859820 2860698 + [G] Predicted sugar kinase recN CDS COG0497 2860785 2862446 + [L] ATPase involved in DNA repair 1554 bamE CDS COG2913 2862638 2862985 + [J] Small protein A (tmRNA-binding) 1555 cds-WP_012667338.1 CDS COG2914 2863128 2863415 - [S] Uncharacterized protein conserved in bacteria cds-WP_012667337.1 CDS COG2867 2863408 2863842 - [I] Oligoketide cyclase/lipid transport protein 1556 smpB CDS COG0691 2864004 2864486 + [O] tmRNA-binding protein 1557 cds-CPI84_RS13870 CDS COG2801 2865320 2865595 - [L] Transposase and inactivated derivatives 1558 cds-CPI84_RS13880 CDS COG1112 2866267 2869147 + [L] Superfamily I DNA and RNA helicases 1559 cds-WP_104945030.1-5 CDS COG2963 2869217 2869466 + [L] Transposase and inactivated derivatives cds-WP_104945030.1-5_2 CDS NA 2869466 2870385 + NA cds-WP_148666344.1 CDS ROG3094 2870312 2870764 + NA 1560 cds-WP_104945024.1-4 CDS COG2963 2871681 2871927 - [L] Transposase and inactivated derivatives cds-WP_104945024.1-4_2 CDS NA 2870792 2871681 - NA 1561 cds-CPI84_RS13910 CDS NA 2872026 2872592 + NA 1562 cds-WP_012667332.1 CDS COG1787 2872861 2873898 + [V] Predicted endonuclease distantly related to archaeal 1563 cds-WP_012667331.1 CDS NA 2874462 2875082 - NA 1564 cds-WP_012667330.1 CDS COG3563 2875209 2877233 - [M] Capsule polysaccharide export protein 1565 cds-WP_012667329.1 CDS COG0835 2877600 2878106 - [NT] Chemotaxis signal transduction protein cheA_2 CDS COG0643 2878103 2880073 - [NT] Chemotaxis protein histidine kinase and related motB_2 CDS COG1360 2880060 2880968 - [N] Flagellar motor protein motA_2 CDS COG1291 2880965 2881861 - [N] Flagellar motor component 1566 flhC_2 CDS ROG0388 2881948 2882520 - NA flhD_2 CDS ROG0481 2882517 2882870 - NA 1567 cds-WP_012667323.1 CDS COG1191 2883288 2884019 - [K] DNA-directed RNA polymerase specialized sigma subunit cds-WP_187298257.1 CDS COG0840 2884191 2885840 - [NT] Methyl-accepting chemotaxis protein 1568 flgL_2 CDS NA 2885921 2886829 - NA flgK_2 CDS COG1256 2886854 2888491 - [N] Flagellar hook-associated protein flgJ_2 CDS COG1705 2888602 2889567 - [NU] Muramidase (flagellum-specific) cds-WP_167317653.1 CDS COG1706 2889567 2890664 - [N] Flagellar basal-body P-ring protein flgH_2 CDS COG2063 2890693 2891406 - [N] Flagellar basal body L-ring protein flgG_2 CDS COG4786 2891471 2892253 - [N] Flagellar basal body rod protein cds-WP_012667315.1 CDS COG4787 2892275 2893012 - [N] Flagellar basal body rod protein flgE_2 CDS COG1749 2893025 2894257 - [N] Flagellar hook protein FlgE cds-WP_012667313.1 CDS COG1843 2894292 2894972 - [N] Flagellar hook capping protein flgC_2 CDS COG1558 2894982 2895386 - [N] Flagellar basal body rod protein flgB_2 CDS COG1815 2895401 2895808 - [N] Flagellar basal body protein 1569 flgA_2 CDS COG1261 2896091 2896795 + [NO] Flagellar basal body P-ring biosynthesis protein flgM_2 CDS COG2747 2896869 2897168 + [KNU] Negative regulator of flagellin synthesis (anti-sigma28 flgN_2 CDS COG3418 2897188 2897631 + [NUO] Flagellar biosynthesis/type III secretory pathway chaperone 1570 cds-WP_012667307.1 CDS ROG0925 2897832 2898170 - NA fliS_2 CDS COG1516 2898163 2898570 - [NUO] Flagellin-specific chaperone FliS fliD_2 CDS COG1345 2898619 2900088 - [N] Flagellar capping protein 1571 cds-WP_012667304.1 CDS COG1344 2900419 2901873 + [N] Flagellin and related hook-associated proteins 1572 cds-WP_012667303.1 CDS COG3710 2902339 2903145 + [K] DNA-binding winged-HTH domains cds-WP_014538644.1 CDS NA 2903117 2903635 + NA 1573 cds-WP_012667301.1 CDS COG0663 2903755 2904324 + [R] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 1574 cds-WP_012667300.1 CDS COG0399 2904356 2905480 - [M] Predicted pyridoxal phosphate-dependent enzyme apparently involved cds-WP_104945120.1 CDS COG3914 2905470 2908853 - [O] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family 1575 fliR_2 CDS COG1684 2909016 2909795 - [NU] Flagellar biosynthesis pathway, component FliR fliQ_2 CDS COG1987 2909795 2910064 - [NU] Flagellar biosynthesis pathway, component FliQ fliP_2 CDS COG1338 2910074 2910817 - [NU] Flagellar biosynthesis pathway, component FliP fliO_2 CDS COG3190 2910814 2911218 - [N] Flagellar biogenesis protein fliN_2 CDS COG1886 2911218 2911592 - [NU] Flagellar motor switch/type III secretory pathway fliM_2 CDS COG1868 2911600 2912604 - [N] Flagellar motor switch protein fliL_2 CDS COG1580 2912604 2913107 - [N] Flagellar basal body-associated protein cds-WP_012667291.1 CDS COG3144 2913235 2914347 - [N] Flagellar hook-length control protein fliJ_2 CDS COG2882 2914344 2914775 - [NUO] Flagellar biosynthesis chaperone fliI_2 CDS COG1157 2914810 2916174 - [NU] Flagellar biosynthesis/type III secretory pathway ATPase fliH_2 CDS COG1317 2916171 2916881 - [NU] Flagellar biosynthesis/type III secretory pathway protein fliG_2 CDS COG1536 2916868 2917854 - [N] Flagellar motor switch protein fliF_2 CDS COG1766 2917851 2919536 - [NU] Flagellar biosynthesis/type III secretory pathway lipoprotein 1576 fliE_2 CDS COG1677 2919803 2920135 + [NU] Flagellar hook-basal body protein cds-WP_012667284.1 CDS COG1352 2920145 2920996 + [NT] Methylase of chemotaxis methyl-accepting proteins cds-WP_014538641.1 CDS COG2201 2920999 2922048 + [NT] Chemotaxis response regulator containing a CheY-like cheY_2 CDS COG0784 2922099 2922491 + [T] FOG: CheY-like receiver cheZ_2 CDS COG3143 2922488 2923120 + [NT] Chemotaxis protein flhB_2 CDS COG1377 2923139 2924284 + [NU] Flagellar biosynthesis pathway, component FlhB flhA_2 CDS COG1298 2924284 2926389 + [NU] Flagellar biosynthesis pathway, component FlhA cds-WP_012667278.1 CDS NA 2926386 2926802 + NA 1577 cds-WP_012667277.1 CDS COG3248 2927256 2928122 + [M] Nucleoside-binding outer membrane protein 1578 speG CDS COG1670 2928243 2928809 + [J] Acetyltransferases, including N-acetylases of ribosomal proteins 1579 cds-WP_012667275.1 CDS ROG0725 2928845 2929267 - NA 1580 cds-WP_104945030.1-6 CDS COG2963 2930372 2930621 - [L] Transposase and inactivated derivatives cds-WP_104945030.1-6_2 CDS NA 2929453 2930372 - NA 1581 cds-WP_012667272.1 CDS NA 2930729 2931064 - NA 1582 cds-WP_012667271.1 CDS NA 2931233 2931478 + NA 1583 nrdH CDS COG0695 2931581 2931823 + [O] Glutaredoxin and related proteins nrdI CDS COG1780 2931828 2932235 + [F] Protein involved in ribonucleotide reduction nrdE CDS COG0209 2932211 2934361 + [F] Ribonucleotide reductase, alpha subunit nrdF CDS COG0208 2934414 2935373 + [F] Ribonucleotide reductase, beta subunit 1584 proV CDS COG4175 2935766 2936962 + [E] ABC-type proline/glycine betaine transport system, ATPase proW CDS COG4176 2936959 2938122 + [E] ABC-type proline/glycine betaine transport system, permease proX CDS COG2113 2938187 2939182 + [E] ABC-type proline/glycine betaine transport systems, periplasmic 1585 cds-WP_012667264.1 CDS COG2814 2939379 2940563 + [G] Arabinose efflux permease 1586 mprA CDS COG1846 2941028 2941558 + [K] Transcriptional regulators emrA CDS COG1566 2941724 2942896 + [V] Multidrug resistance efflux pump emrB CDS COG2211 2942913 2944448 + [G] Na+/melibiose symporter and related transporters 1587 cds-WP_012667260.1 CDS COG0566 2944512 2945546 - [J] rRNA methylases 1588 trxC CDS COG0526 2945785 2946204 + [OC] Thiol-disulfide isomerase and thioredoxins cds-WP_012667258.1 CDS COG3148 2946268 2946978 + [S] Uncharacterized conserved protein cds-WP_012667257.1 CDS COG1042 2947049 2949718 + [C] Acyl-CoA synthetase (NDP forming) 1589 cds-WP_222838326.1 CDS NA 2949793 2949834 + NA pssA CDS NA 2949818 2951173 + NA cds-WP_012667255.1 CDS COG5544 2951224 2951544 + [R] Predicted periplasmic lipoprotein 1590 cds-WP_012667254.1 CDS COG0477 2951545 2952846 - [GEPR] Permeases of the major facilitator superfamily 1591 rrf_3 rRNA NA 2953088 2953203 - NA rna-CPI84_RS14325 rRNA NA 2953415 2956409 - NA rna-CPI84_RS14330 tRNA NA 2956635 2956710 - NA rna-CPI84_RS14335 rRNA NA 2956782 2958323 - NA 1592 gmhB CDS COG0241 2958734 2959294 - [E] Histidinol phosphatase and related phosphatases 1593 metN CDS COG1135 2959483 2960514 + [P] ABC-type metal ion transport system, ATPase cds-WP_012667251.1 CDS COG2011 2960507 2961160 + [P] ABC-type metal ion transport system, permease cds-WP_012667250.1 CDS COG1464 2961196 2962011 + [P] ABC-type metal ion transport system, periplasmic 1594 rcsF CDS ROG4703 2962147 2962551 + NA tsaA CDS COG1720 2962548 2963255 + [S] Uncharacterized conserved protein proS CDS COG0442 2963348 2965066 + [J] Prolyl-tRNA synthetase 1595 cds-WP_012667246.1 CDS ROG0107 2965450 2966472 + NA 1596 arfB CDS COG1186 2966623 2967039 - [J] Protein chain release factor B cds-WP_012667244.1 CDS COG4681 2967036 2967590 - [S] Uncharacterized protein conserved in bacteria 1597 cds-CPI84_RS19715 CDS NA 2967733 2967910 + NA rof CDS COG4568 2967897 2968160 + [K] Transcriptional antiterminator 1598 cds-WP_012667242.1 CDS COG2863 2968367 2968558 - [C] Cytochrome c553 tilS CDS COG0037 2968577 2969878 - [D] Predicted ATPase of the PP-loop superfamily cds-WP_012667240.1 CDS COG0346 2969934 2970329 - [E] Lactoylglutathione lyase and related lyases cds-WP_041474093.1 CDS COG1982 2970358 2972532 - [E] Arginine/lysine/ornithine decarboxylases 1599 accA CDS COG0825 2972718 2973677 - [I] Acetyl-CoA carboxylase alpha subunit dnaE CDS COG0587 2973690 2977172 - [L] DNA polymerase III, alpha subunit rnhB CDS COG0164 2977203 2977826 - [L] Ribonuclease HII lpxB CDS COG0763 2977823 2978968 - [M] Lipid A disaccharide synthetase lpxA CDS COG1043 2978972 2979760 - [M] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase fabZ CDS COG0764 2979764 2980219 - [I] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases lpxD CDS COG1044 2980378 2981400 - [M] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase skp CDS COG2825 2981404 2981901 - [M] Outer membrane protein bamA CDS COG4775 2982024 2984435 - [M] Outer membrane protein/protective antigen OMA87 rseP CDS COG0750 2984489 2985838 - [M] Predicted membrane-associated Zn-dependent proteases 1 cdsA CDS COG0575 2985848 2986705 - [I] CDP-diglyceride synthetase ispU CDS COG0020 2986724 2987476 - [I] Undecaprenyl pyrophosphate synthase ispC CDS COG0743 2987648 2988862 - [I] 1-deoxy-D-xylulose 5-phosphate reductoisomerase frr CDS COG0233 2989012 2989569 - [J] Ribosome recycling factor pyrH CDS COG0528 2989692 2990417 - [F] Uridylate kinase tsf CDS COG0264 2990573 2991424 - [J] Translation elongation factor Ts rpsB CDS COG0052 2991626 2992357 - [J] Ribosomal protein S2 1600 map CDS COG0024 2992714 2993508 + [J] Methionine aminopeptidase glnD CDS COG2844 2993603 2996260 + [O] UTP:GlnB (protein PII) uridylyltransferase dapD CDS COG2171 2996357 2997181 + [E] Tetrahydrodipicolinate N-succinyltransferase 1601 cds-WP_012667218.1 CDS ROG5092 2997517 2997909 + NA 1602 degP CDS COG0265 2997998 2999446 - [O] Trypsin-like serine proteases, typically periplasmic, contain 1603 dgt CDS COG0232 2999594 3001099 - [F] dGTP triphosphohydrolase 1604 mtnN CDS COG0775 3001219 3001917 + [F] Nucleoside phosphorylase 1605 cds-WP_012667213.1 CDS COG5430 3002236 3002481 + [S] Uncharacterized secreted protein 1606 erpA CDS COG0316 3002585 3002929 - [S] Uncharacterized conserved protein 1607 hemL CDS COG0001 3003195 3004475 + [H] Glutamate-1-semialdehyde aminotransferase 1608 fhuB CDS COG0609 3004518 3006494 - [P] ABC-type Fe3+-siderophore transport system, permease component fhuD CDS COG0614 3006494 3007372 - [P] ABC-type Fe3+-hydroxamate transport system, periplasmic component fhuC CDS COG1120 3007387 3008181 - [PH] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components fhuA CDS COG1629 3008230 3010437 - [P] Outer membrane receptor proteins, mostly Fe 1609 cds-WP_012667207.1 CDS NA 3010627 3010896 + NA 1610 cds-WP_012667206.1 CDS NA 3010957 3011388 - NA cds-WP_012667205.1 CDS COG3209 3011390 3015676 - [M] Rhs family protein cds-WP_012667204.1 CDS COG5435 3015689 3016138 - [S] Uncharacterized conserved protein 1611 mrcB CDS COG0744 3016311 3018827 - [M] Membrane carboxypeptidase (penicillin-binding protein) 1612 hrpB CDS COG1643 3018954 3021392 - [L] HrpA-like helicases 1613 thpR CDS COG1514 3021470 3021997 + [J] 2'-5' RNA ligase sfsA CDS COG1489 3022007 3022711 + [R] DNA-binding protein, stimulates sugar fermentation 1614 dksA CDS COG1734 3023018 3023473 + [T] DnaK suppressor protein gluQRS CDS COG0008 3023544 3024452 + [J] Glutamyl- and glutaminyl-tRNA synthetases pcnB CDS COG0617 3024511 3025941 + [J] tRNA nucleotidyltransferase/poly(A) polymerase folK CDS COG0801 3025938 3026417 + [H] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase panB CDS COG0413 3026496 3027290 + [H] Ketopantoate hydroxymethyltransferase panC CDS COG0414 3027306 3028160 + [H] Panthothenate synthetase panD CDS COG0853 3028224 3028604 + [H] Aspartate 1-decarboxylase 1615 cds-WP_012667192.1 CDS COG0842 3028673 3029443 - [V] ABC-type multidrug transport system, permease component cds-WP_012667191.1 CDS COG1131 3029440 3030366 - [V] ABC-type multidrug transport system, ATPase component 1616 can CDS COG0288 3030595 3031257 + [P] Carbonic anhydrase 1617 hpt CDS COG0634 3031357 3031893 - [F] Hypoxanthine-guanine phosphoribosyltransferase 1618 cds-WP_012667188.1 CDS COG0626 3032147 3033427 + [E] Cystathionine beta-lyases/cystathionine gamma-synthases 1619 cds-WP_012667187.1 CDS ROG6734 3033742 3034419 - NA 1620 cas6f CDS ROG1570 3035600 3036154 - NA csy3 CDS ROG1300 3036163 3037167 - NA csy2 CDS ROG1613 3037191 3038135 - NA csy1 CDS ROG1732 3038132 3039481 - NA 1621 cds-WP_012667182.1 CDS COG3514 3039940 3040236 - [S] Uncharacterized protein conserved in bacteria cds-WP_012667181.1 CDS COG2929 3040223 3040501 - [S] Uncharacterized protein conserved in bacteria 1622 cas3f CDS COG1203 3040575 3043886 - [R] Predicted helicases cas1f CDS COG1518 3043883 3044860 - [L] Uncharacterized protein predicted to be involved 1623 cueO CDS COG2132 3046038 3047633 - [Q] Putative multicopper oxidases 1624 cds-WP_012667176.1 CDS NA 3047812 3048159 + NA 1625 speE CDS COG0421 3048260 3049117 + [E] Spermidine synthase speD CDS COG1586 3049139 3049942 + [E] S-adenosylmethionine decarboxylase 1626 yacL CDS COG3112 3050030 3050392 - [S] Uncharacterized protein conserved in bacteria 1627 acnB CDS COG1049 3050566 3053163 - [C] Aconitase B 1628 cds-WP_012667170.1 CDS COG3710 3053936 3054685 + [K] DNA-binding winged-HTH domains cds-WP_012667169.1 CDS NA 3054682 3055152 + NA 1629 cas2 CDS ROG0186 3056277 3056561 - NA cas1e CDS COG1518 3056563 3057492 - [L] Uncharacterized protein predicted to be involved cas6e CDS ROG0140 3057543 3058145 - NA cas5e CDS ROG0047 3058142 3058798 - NA cas7e CDS ROG0031 3058801 3059895 - NA casB CDS ROG1578 3059892 3060362 - NA casA CDS ROG2522 3060346 3061869 - NA cas3 CDS COG1203 3061866 3064499 - [R] Predicted helicases 1630 cds-WP_041474091.1 CDS ROG1583 3064944 3065213 + NA cds-WP_014538615.1 CDS NA 3065228 3065566 + NA 1631 cds-WP_012667158.1 CDS COG3668 3065662 3065973 - [R] Plasmid stabilization system protein cds-WP_012667157.1 CDS ROG4089 3065973 3066227 - NA 1632 cds-WP_104945122.1 CDS COG1024 3067587 3068369 + [I] Enoyl-CoA hydratase/carnithine racemase 1633 cds-WP_014538611.1 CDS COG0183 3068371 3069567 - [I] Acetyl-CoA acetyltransferase cds-WP_012667154.1 CDS COG0318 3069530 3071032 - [IQ] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II cds-WP_012667153.1 CDS COG0824 3071032 3071466 - [R] Predicted thioesterase 1634 cds-WP_012667152.1 CDS COG0604 3071513 3072499 + [CR] NADPH:quinone reductase and related Zn-dependent oxidoreductases 1635 cds-WP_014538610.1 CDS COG1268 3072540 3073151 - [R] Uncharacterized conserved protein cds-WP_012667150.1 CDS COG0619 3073090 3073707 - [P] ABC-type cobalt transport system, permease component cds-WP_012667149.1 CDS COG1122 3073704 3074378 - [P] ABC-type cobalt transport system, ATPase component cds-WP_012667148.1 CDS COG0300 3074392 3075096 - [R] Short-chain dehydrogenases of various substrate specificities 1636 lpdA CDS COG1249 3075203 3076630 - [C] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) aceF CDS COG0508 3076923 3078521 - [C] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) aceE CDS COG2609 3078536 3081199 - [C] Pyruvate dehydrogenase complex, dehydrogenase (E1) component pdhR CDS COG2186 3081456 3082220 - [K] Transcriptional regulators 1637 aroP CDS COG1113 3082834 3084189 + [E] Gamma-aminobutyrate permease and related permeases 1638 cds-WP_012667141.1 CDS COG2211 3084358 3085773 + [G] Na+/melibiose symporter and related transporters cds-WP_012667140.1 CDS COG3940 3085770 3086720 + [R] Predicted beta-xylosidase 1639 cds-CPI84_RS14915 CDS NA 3087200 3090423 + NA 1640 cds-WP_012667138.1 CDS NA 3090729 3093863 + NA 1641 ampE CDS COG3725 3093921 3094775 - [V] Membrane protein required for beta-lactamase induction ampD CDS COG3023 3094772 3095341 - [V] Negative regulator of beta-lactamase expression 1642 nadC CDS COG0157 3096047 3096937 + [H] Nicotinate-nucleotide pyrophosphorylase 1643 ppdD CDS COG4969 3097151 3097594 + [NU] Tfp pilus assembly protein, major pilin gspE CDS COG2804 3097591 3098991 + [NU] Type II secretory pathway, ATPase PulE/Tfp hofC CDS COG1459 3098984 3100183 + [NU] Type II secretory pathway, component PulF 1644 cds-CPI84_RS14960 CDS NA 3100227 3101260 - NA 1645 coaE CDS COG0237 3101513 3102124 + [H] Dephospho-CoA kinase zapD CDS COG4582 3102129 3102872 + [S] Uncharacterized protein conserved in bacteria yacG CDS COG3024 3102883 3103068 + [S] Uncharacterized protein conserved in bacteria 1646 mutT CDS COG1194 3103110 3103502 - [L] A/G-specific DNA glycosylase 1647 cds-WP_012667126.1 CDS ROG3054 3104328 3104795 + NA cds-WP_012667125.1 CDS COG3031 3104831 3105337 + [U] Type II secretory pathway, component PulC gspD CDS COG1450 3105366 3107303 + [NU] Type II secretory pathway, component PulD gspE_2 CDS COG2804 3107303 3108769 + [NU] Type II secretory pathway, ATPase PulE/Tfp gspF CDS COG1459 3108771 3109976 + [NU] Type II secretory pathway, component PulF gspG CDS COG2165 3109983 3110432 + [NU] Type II secretory pathway, pseudopilin PulG cds-WP_012667120.1 CDS COG4795 3110432 3110917 + [U] Type II secretory pathway, component PulJ gspI CDS ROG4211 3110914 3111276 + NA gspJ CDS COG4795 3111276 3111836 + [U] Type II secretory pathway, component PulJ gspK CDS COG3156 3111836 3112729 + [U] Type II secretory pathway, component PulK cds-WP_012667116.1 CDS COG3297 3112735 3113802 + [U] Type II secretory pathway, component PulL cds-WP_012667115.1 CDS NA 3113799 3114257 + NA cds-WP_012667114.1 CDS COG1989 3114247 3115035 + [NOU] Type II secretory pathway, prepilin signal 1648 gspS CDS NA 3115153 3115533 - NA 1649 gbpA CDS COG3397 3115838 3117304 + [S] Uncharacterized protein conserved in bacteria 1650 cds-WP_012667111.1 CDS NA 3117555 3117983 - NA 1651 cds-WP_104945124.1 CDS ROG6591 3118035 3118296 + NA cds-WP_104945124.1_2 CDS NA 3118296 3119146 + NA 1652 cds-CPI84_RS15070 CDS NA 3119204 3119494 - NA 1653 secA CDS COG0653 3119678 3122386 - [U] Preprotein translocase subunit SecA (ATPase, RNA 1654 secM CDS NA 3122458 3122961 - NA 1655 cds-WP_012667105.1 CDS COG4701 3122984 3123499 + [S] Uncharacterized protein conserved in bacteria 1656 lpxC CDS COG0774 3123507 3124424 - [M] UDP-3-O-acyl-N-acetylglucosamine deacetylase ftsZ CDS COG0206 3124526 3125680 - [D] Cell division GTPase ftsA CDS COG0849 3125753 3127009 - [D] Actin-like ATPase involved in cell division ftsQ CDS COG1589 3127006 3127845 - [M] Cell division septal protein cds-WP_012667100.1 CDS COG1181 3127847 3128767 - [M] D-alanine-D-alanine ligase and related ATP-grasp enzymes murC CDS COG0773 3128760 3130235 - [M] UDP-N-acetylmuramate-alanine ligase murG CDS COG0707 3130308 3131366 - [M] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase ftsW CDS COG0772 3131370 3132578 - [D] Bacterial cell division membrane protein murD CDS COG0771 3132578 3133894 - [M] UDP-N-acetylmuramoylalanine-D-glutamate ligase mraY CDS COG0472 3133897 3134979 - [M] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase murF CDS COG0770 3134973 3136331 - [M] UDP-N-acetylmuramyl pentapeptide synthase murE CDS COG0769 3136328 3137815 - [M] UDP-N-acetylmuramyl tripeptide synthase cds-WP_012667093.1 CDS COG0768 3137802 3139574 - [M] Cell division protein FtsI/penicillin-binding protein 2 ftsL CDS COG3116 3139590 3139910 - [D] Cell division protein rsmH CDS COG0275 3139907 3140848 - [M] Predicted S-adenosylmethionine-dependent methyltransferase involved in cell mraZ CDS COG2001 3140851 3141309 - [S] Uncharacterized protein conserved in bacteria 1657 cra CDS COG1609 3141848 3142858 - [K] Transcriptional regulators 1658 ilvN CDS COG0440 3143021 3143512 - [E] Acetolactate synthase, small (regulatory) subunit ilvI CDS COG0028 3143515 3145239 - [EH] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate 1659 leuL CDS NA 3145890 3146036 + NA 1660 leuA CDS COG0119 3146130 3147698 + [E] Isopropylmalate/homocitrate/citramalate synthases leuB CDS COG0473 3147700 3148788 + [CE] Isocitrate/isopropylmalate dehydrogenase leuC CDS COG0065 3148793 3150190 + [E] 3-isopropylmalate dehydratase large subunit leuD CDS COG0066 3150200 3150805 + [E] 3-isopropylmalate dehydratase small subunit 1661 cds-WP_012667081.1 CDS COG2064 3150857 3152062 - [NU] Flp pilus assembly protein TadC 1662 sgrR CDS COG4533 3152318 3154012 + [R] ABC-type uncharacterized transport system, periplasmic component cds-WP_187298259.1 CDS ROG3470 3154043 3154324 + NA 1663 thiB CDS COG4143 3154424 3155410 + [H] ABC-type thiamine transport system, periplasmic component thiP CDS COG1178 3155386 3156996 + [P] ABC-type Fe3+ transport system, permease component thiQ CDS COG3840 3156980 3157693 + [H] ABC-type thiamine transport system, ATPase component 1664 cds-WP_012667075.1 CDS COG0586 3157673 3158434 - [S] Uncharacterized membrane-associated protein 1665 polB CDS COG0417 3158604 3160967 + [L] DNA polymerase elongation subunit (family B) rapA CDS COG0553 3161140 3164046 + [KL] Superfamily II DNA/RNA helicases, SNF2 family rluA CDS COG0564 3164088 3164741 + [J] Pseudouridylate synthases, 23S RNA-specific 1666 djlA CDS COG1076 3164878 3165696 - [O] DnaJ-domain-containing proteins 1 1667 lptD CDS COG1452 3165909 3168284 + [M] Organic solvent tolerance protein OstA surA CDS COG0760 3168338 3169633 + [O] Parvulin-like peptidyl-prolyl isomerase pdxA CDS COG1995 3169623 3170615 + [H] Pyridoxal phosphate biosynthesis protein rsmA CDS COG0030 3170608 3171435 + [J] Dimethyladenosine transferase (rRNA methylation) apaG CDS COG2967 3171432 3171809 + [P] Uncharacterized protein affecting Mg2+/Co2+ transport apaH CDS ROG1223 3171823 3172647 + NA 1668 folA CDS COG0262 3172690 3173172 - [H] Dihydrofolate reductase 1669 cds-WP_012667063.1 CDS COG1280 3173361 3173975 + [E] Putative threonine efflux protein 1670 carB CDS COG0458 3174079 3177333 - [EF] Carbamoylphosphate synthase large subunit (split gene carA CDS COG0505 3177348 3178523 - [EF] Carbamoylphosphate synthase small subunit 1671 dapB CDS COG0289 3178967 3179788 - [E] Dihydrodipicolinate reductase 1672 ispH CDS COG0761 3180048 3181001 - [IM] Penicillin tolerance protein fkpB CDS COG1047 3180982 3181452 - [O] FKBP-type peptidyl-prolyl cis-trans isomerases 2 lspA CDS COG0597 3181456 3181965 - [MU] Lipoprotein signal peptidase ileS CDS COG0060 3181962 3184778 - [J] Isoleucyl-tRNA synthetase ribF CDS COG0196 3184809 3185753 - [H] FAD synthase 1673 rpsT CDS COG0268 3186069 3186332 + [J] Ribosomal protein S20 1674 nhaA CDS COG3004 3186810 3187970 - [P] Na+/H+ antiporter 1675 dnaJ CDS COG0484 3188289 3189431 - [O] DnaJ-class molecular chaperone with C-terminal Zn dnaK CDS COG0443 3189542 3191455 - [O] Molecular chaperone 1676 cds-WP_104945128.1 CDS COG1835 3192057 3193208 + [I] Predicted acyltransferases 1677 cds-WP_104945129.1 CDS NA 3193552 3194127 - NA 1678 mog CDS COG0521 3194196 3194783 - [H] Molybdopterin biosynthesis enzymes tal_2 CDS COG0176 3194967 3195920 - [G] Transaldolase 1679 cds-WP_014538583.1 CDS NA 3195954 3196100 + NA 1680 yaaA CDS COG3022 3196189 3196965 + [S] Uncharacterized protein conserved in bacteria 1681 thrC CDS COG0498 3197029 3198315 - [E] Threonine synthase thrB CDS COG0083 3198319 3199248 - [E] Homoserine kinase thrA CDS COG0527 3199251 3201713 - [E] Aspartokinases 1682 thrL CDS NA 3201795 3201866 - NA 1683 cds-WP_157861012.1 CDS NA 3202121 3202267 + NA 1684 arcA CDS COG0745 3202854 3203570 + [TK] Response regulators consisting of a CheY-like 1685 creA CDS COG3045 3203654 3204127 - [S] Uncharacterized protein conserved in bacteria 1686 robA CDS COG2207 3204334 3205218 + [K] AraC-type DNA-binding domain-containing proteins 1687 cds-WP_012667039.1 CDS ROG4089 3205324 3205569 + NA cds-WP_167317652.1 CDS ROG1154 3205583 3205744 + NA 1688 gpmB CDS COG0406 3205988 3206635 - [G] Fructose-2,6-bisphosphatase 1689 yjjX CDS COG1986 3206686 3207234 + [S] Uncharacterized conserved protein 1690 trpR CDS COG2973 3207220 3207552 - [K] Trp operon repressor 1691 sltY CDS COG0741 3207639 3209561 - [M] Soluble lytic murein transglycosylase and related 1692 cds-CPI84_RS15470 CDS COG1349 3210007 3210303 + [KG] Transcriptional regulators of sugar metabolism 1693 cds-WP_012667035.1 CDS ROG3733 3210499 3210864 + NA 1694 cds-WP_012667034.1 CDS COG0455 3211104 3212189 + [D] ATPases involved in chromosome partitioning 1695 ettA CDS COG0488 3212679 3214346 + [R] ATPase components of ABC transporters with 1696 cds-WP_041473972.1 CDS COG0583 3214411 3215292 - [K] Transcriptional regulator 1697 cds-WP_012667030.1 CDS COG0604 3215390 3216391 + [CR] NADPH:quinone reductase and related Zn-dependent oxidoreductases 1698 cds-WP_012667029.1 CDS COG2831 3216486 3218225 - [U] Hemolysin activation/secretion protein cds-WP_012667028.1 CDS NA 3218285 3219523 - NA 1699 nadR CDS COG3172 3219906 3221132 - [H] Predicted ATPase/kinase involved in NAD metabolism radA CDS COG1066 3221181 3222563 - [O] Predicted ATP-dependent serine protease serB CDS COG0560 3222573 3223550 - [E] Phosphoserine phosphatase 1700 cds-WP_012667024.1 CDS COG3726 3223713 3224372 + [R] Uncharacterized membrane protein affecting hemolysin expression 1701 yjjJ CDS COG3550 3224402 3225736 - [R] Uncharacterized protein related to capsule biosynthesis 1702 deoD CDS COG0813 3225884 3226603 - [F] Purine-nucleoside phosphorylase deoB CDS COG1015 3226676 3227899 - [G] Phosphopentomutase deoA CDS COG0213 3227963 3229285 - [F] Thymidine phosphorylase deoC CDS COG0274 3229419 3230198 - [F] Deoxyribose-phosphate aldolase 1703 cds-WP_012667018.1 CDS COG0084 3230466 3231242 - [L] Mg-dependent DNase cds-WP_012667017.1 CDS COG4667 3231239 3232267 - [R] Predicted esterase of the alpha-beta hydrolase 1704 cds-WP_004159835.1 CDS COG5487 3232378 3232539 - [S] Small integral membrane protein 1705 osmY CDS COG2823 3232663 3233277 - [R] Predicted periplasmic or secreted lipoprotein 1706 prfC CDS COG4108 3233553 3235142 - [J] Peptide chain release factor RF-3 1707 cds-WP_012667014.1 CDS COG2818 3235310 3235954 - [L] 3-methyladenine DNA glycosylase 1708 cds-WP_104945134.1 CDS COG1397 3236020 3237114 - [O] ADP-ribosylglycohydrolase 1709 cds-WP_104945135.1 CDS NA 3237298 3242103 - NA 1710 cds-CPI84_RS15600 CDS NA 3243238 3243952 - NA 1711 cds-WP_012666458.1-10 CDS COG3335 3244138 3245178 + [L] Transposase and inactivated derivatives 1712 cds-CPI84_RS15610 CDS COG3755 3245194 3245572 - [S] Uncharacterized protein conserved in bacteria cds-WP_012667008.1 CDS NA 3245634 3246434 - NA 1713 cds-WP_012667007.1 CDS NA 3246572 3246964 - NA 1714 cds-WP_012667006.1 CDS NA 3247093 3247806 - NA cds-WP_012667005.1 CDS COG3926 3247813 3248319 - [R] Putative secretion activating protein 1715 vgrG CDS COG3501 3248399 3250327 - [S] Uncharacterized protein conserved in bacteria 1716 cds-WP_012667003.1 CDS NA 3250589 3251665 - NA cds-WP_104945136.1 CDS NA 3251689 3252123 - NA cds-WP_104945137.1 CDS COG4104 3252151 3253218 - [S] Uncharacterized conserved protein vgrG_2 CDS COG3501 3253241 3255199 - [S] Uncharacterized protein conserved in bacteria cds-WP_012666999.1 CDS COG0515 3255246 3256667 - [RTKL] Serine/threonine protein kinase tssH CDS COG0542 3256697 3259312 - [O] ATPases with chaperone activity, ATP-binding subunit 1717 cds-WP_012666996.1 CDS NA 3259740 3260486 - NA tssG CDS COG3520 3260528 3261586 - [S] Uncharacterized protein conserved in bacteria tssF CDS COG3519 3261583 3263457 - [S] Uncharacterized protein conserved in bacteria tssE CDS COG3518 3263476 3264042 - [S] Uncharacterized protein conserved in bacteria cds-WP_012666992.1 CDS COG4455 3264039 3264860 - [R] Protein of avirulence locus involved in cds-WP_012666991.1 CDS NA 3264870 3265838 - NA cds-WP_012666990.1 CDS COG0631 3265856 3266650 - [T] Serine/threonine protein phosphatase tagH_2 CDS COG3456 3266647 3268467 - [T] Uncharacterized conserved protein, contains FHA domain 1718 cds-WP_012666988.1 CDS COG3755 3268818 3269219 - [S] Uncharacterized protein conserved in bacteria 1719 cds-WP_104945142.1 CDS COG4461 3270295 3270945 - [S] Uncharacterized protein conserved in bacteria, putative 1720 cds-WP_071819841.1 CDS COG3755 3271248 3271640 - [S] Uncharacterized protein conserved in bacteria 1721 cds-WP_012666986.1 CDS NA 3271709 3272446 - NA cds-WP_012666985.1 CDS NA 3272471 3272914 - NA cds-WP_012666984.1 CDS COG3157 3272969 3273451 - [S] Hemolysin-coregulated protein (uncharacterized) 1722 cds-WP_012666983.1 CDS ROG0473 3273723 3273998 - NA tssC CDS COG3517 3273995 3275494 - [S] Uncharacterized protein conserved in bacteria tssB CDS COG3516 3275498 3276034 - [S] Uncharacterized protein conserved in bacteria tssA CDS COG3515 3276097 3277104 - [S] Uncharacterized protein conserved in bacteria tagF_2 CDS COG3913 3277122 3277832 - [S] Uncharacterized protein conserved in bacteria tssM_2 CDS COG3523 3277849 3281481 - [S] Uncharacterized protein conserved in bacteria cds-WP_012666977.1 CDS COG3455 3281485 3282726 - [S] Uncharacterized protein conserved in bacteria tssK CDS COG3522 3282744 3284087 - [S] Uncharacterized protein conserved in bacteria tssJ CDS COG3521 3284107 3284619 - [S] Uncharacterized protein conserved in bacteria cds-WP_012666974.1 CDS NA 3284644 3285144 - NA 1723 yjjG CDS COG1011 3286127 3286807 - [R] Predicted hydrolase (HAD superfamily) rimI CDS COG0456 3286822 3287262 - [R] Acetyltransferases cds-WP_041474086.1 CDS COG3050 3287225 3287647 - [L] DNA polymerase III, psi subunit 1724 rsmC CDS COG2813 3287817 3288845 + [J] 16S RNA G1207 methylase RsmC 1725 rna-CPI84_RS15815 tRNA NA 3289024 3289110 + NA rna-CPI84_RS15820 tRNA NA 3289144 3289230 + NA rna-CPI84_RS15825 tRNA NA 3289261 3289347 + NA 1726 cds-WP_012666969.1 CDS COG1282 3289450 3289683 - [C] NAD/NADP transhydrogenase beta subunit 1727 cds-WP_012666968.1 CDS COG3706 3289929 3291026 + [T] Response regulator containing a CheY-like receiver 1728 cds-WP_012666967.1 CDS COG0477 3291192 3292397 - [GEPR] Permeases of the major facilitator superfamily 1729 cds-WP_157861010.1 CDS ROG8530 3292655 3292897 + NA 1730 cds-WP_012666965.1 CDS ROG8050 3293207 3293647 + NA 1731 cds-CPI84_RS15855 CDS COG3182 3293718 3295135 + [S] Uncharacterized iron-regulated membrane protein 1732 cds-WP_012666963.1 CDS COG1957 3295187 3296173 - [F] Inosine-uridine nucleoside N-ribohydrolase cds-WP_012666962.1 CDS COG1609 3296188 3297204 - [K] Transcriptional regulators cds-WP_012666961.1 CDS COG0477 3297286 3298680 - [GEPR] Permeases of the major facilitator superfamily 1733 cds-WP_012666960.1 CDS ROG4956 3299323 3299769 + NA 1734 rna-CPI84_RS15885 tRNA NA 3299936 3300012 + NA 1735 cds-WP_014538548.1 CDS ROG4411 3300521 3300736 - NA 1736 cds-WP_012666958.1 CDS ROG7817 3302225 3302752 + NA 1737 lysC_2 CDS NA 3303631 3303933 - NA 1738 cds-WP_012666956.1 CDS COG3772 3304195 3304704 - [R] Phage-related lysozyme (muraminidase) cds-WP_104945199.1 CDS NA 3304685 3304900 - NA 1739 cds-WP_104945024.1-5 CDS COG2963 3305482 3305728 + [L] Transposase and inactivated derivatives cds-WP_104945024.1-5_2 CDS NA 3305728 3306617 + NA 1740 cds-WP_012666953.1 CDS ROG3906 3306753 3306944 - NA 1741 cds-WP_012666952.1 CDS COG2932 3307674 3308288 + [K] Predicted transcriptional regulator 1742 cds-WP_012666951.1 CDS COG0553 3308832 3312077 - [KL] Superfamily II DNA/RNA helicases, SNF2 family cds-WP_012666950.1 CDS NA 3312077 3313777 - NA cds-WP_012666949.1 CDS COG1360 3313774 3314511 - [N] Flagellar motor protein zorA CDS ROG7436 3314527 3316716 - NA 1743 cds-WP_012666947.1 CDS COG0286 3317222 3318928 + [V] Type I restriction-modification system methyltransferase subunit cds-WP_014538541.1 CDS COG0732 3318918 3320342 + [V] Restriction endonuclease S subunits cds-WP_012666945.1 CDS COG0610 3320445 3323585 + [V] Type I site-specific restriction-modification system, R 1744 cds-WP_012666944.1 CDS COG0794 3323760 3324725 - [M] Predicted sugar phosphate isomerase involved in cds-WP_012666943.1 CDS COG1349 3324730 3325497 - [KG] Transcriptional regulators of sugar metabolism gutM CDS COG4578 3325590 3325952 - [K] Glucitol operon activator srlD CDS COG1028 3326000 3326779 - [IQR] Dehydrogenases with different specificities (related to cds-WP_012666940.1 CDS COG3731 3326776 3327162 - [G] Phosphotransferase system sorbitol-specific component IIA cds-WP_012666939.1 CDS COG3732 3327177 3328178 - [G] Phosphotransferase system sorbitol-specific component IIBC cds-WP_012666938.1 CDS COG3730 3328194 3328742 - [G] Phosphotransferase system sorbitol-specific component IIC 1745 cds-WP_012666937.1 CDS ROG2828 3329491 3329724 - NA 1746 pqqF CDS COG1025 3330068 3332458 - [O] Secreted/periplasmic Zn-dependent peptidases, insulinase-like pqqE CDS COG0535 3332462 3333610 - [R] Predicted Fe-S oxidoreductases pqqD CDS ROG0297 3333597 3333878 - NA pqqC CDS COG5424 3333875 3334630 - [H] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein pqqB CDS NA 3334627 3335538 - NA 1747 pqqA CDS NA 3335634 3335708 - NA 1748 cds-WP_014538537.1 CDS COG2355 3335880 3336929 - [E] Zn-dependent dipeptidase, microsomal dipeptidase homolog 1749 cds-WP_012666929.1 CDS COG0659 3337054 3338532 - [P] Sulfate permease and related transporters (MFS cds-WP_012666928.1 CDS COG0288 3338529 3339155 - [P] Carbonic anhydrase 1750 cds-WP_012666927.1 CDS COG1902 3339927 3341936 + [C] NADH:flavin oxidoreductases, Old Yellow Enzyme family 1751 rlmG CDS COG2813 3342006 3343133 - [J] 16S RNA G1207 methylase RsmC 1752 cds-WP_012666925.1 CDS COG1451 3343216 3343719 + [R] Predicted metal-dependent hydrolase 1753 cds-WP_012666924.1 CDS COG0038 3343835 3345526 - [P] Chloride channel protein EriC 1754 cds-WP_012666923.1 CDS COG0861 3345940 3346920 + [P] Membrane protein TerC, possibly involved in 1755 sstT CDS COG3633 3347164 3348396 + [E] Na+/serine symporter 1756 cds-WP_014538533.1 CDS NA 3348553 3348828 - NA 1757 cds-WP_012666921.1 CDS COG0586 3349038 3349712 + [S] Uncharacterized membrane-associated protein mzrA CDS NA 3349709 3350101 + NA 1758 cds-WP_012666919.1 CDS ROG4156 3350268 3350639 + NA cds-WP_012666918.1 CDS COG4575 3350682 3350987 + [S] Uncharacterized conserved protein cds-WP_012666917.1 CDS COG5393 3350989 3351381 + [S] Predicted membrane protein cds-WP_012666916.1 CDS NA 3351381 3351662 + NA 1759 cds-WP_014538530.1 CDS COG2259 3351871 3352263 + [S] Predicted membrane protein cds-WP_081441619.1 CDS COG0435 3352358 3352636 + [O] Predicted glutathione S-transferase 1760 cds-WP_012666914.1 CDS COG0583 3352671 3353573 - [K] Transcriptional regulator 1761 cds-WP_012666913.1 CDS COG1741 3353698 3354402 + [R] Pirin-related protein 1762 cds-WP_012666912.1 CDS NA 3354652 3354891 + NA 1763 rsmI CDS COG0313 3355747 3356610 - [R] Predicted methyltransferases 1764 cds-WP_012666908.1 CDS COG3107 3356673 3358697 + [R] Putative lipoprotein cds-WP_014538526.1 CDS COG0792 3358655 3359047 + [L] Predicted endonuclease distantly related to archaeal diaA CDS COG0279 3359077 3359667 + [G] Phosphoheptose isomerase yraP CDS COG2823 3359679 3360251 + [R] Predicted periplasmic or secreted lipoprotein 1765 cds-WP_012666904.1 CDS COG3711 3360288 3362222 - [K] Transcriptional antiterminator 1766 cds-WP_012666903.1 CDS ROG1892 3362334 3363074 - NA cds-WP_014538525.1 CDS COG1921 3363071 3364192 - [E] Selenocysteine synthase [seryl-tRNASer selenium transferase] cds-WP_012666901.1 CDS COG3964 3364176 3365309 - [R] Predicted amidohydrolase cds-WP_012666900.1 CDS ROG6245 3365356 3366000 - NA cds-WP_012666899.1 CDS ROG6269 3366014 3366790 - NA cds-WP_012666898.1 CDS ROG6603 3366824 3367123 - NA cds-WP_012666897.1 CDS ROG8490 3367123 3367482 - NA cds-WP_012666896.1 CDS ROG7495 3367492 3367836 - NA 1767 cds-WP_012666894.1 CDS NA 3368245 3369144 + NA 1768 pmbA CDS COG0312 3369334 3370674 - [R] Predicted Zn-dependent proteases and their inactivated 1769 cds-WP_012666892.1 CDS COG3028 3370836 3371378 + [S] Uncharacterized protein conserved in bacteria 1770 mpl CDS COG0773 3371493 3372845 - [M] UDP-N-acetylmuramate-alanine ligase 1771 fbp CDS COG0158 3373018 3374016 + [G] Fructose-1,6-bisphosphatase 1772 cds-WP_012666889.1 CDS COG3591 3374133 3376334 - [E] V8-like Glu-specific endopeptidase 1773 cds-WP_012666887.1 CDS COG0840 3376954 3378519 - [NT] Methyl-accepting chemotaxis protein 1774 ppa CDS COG0221 3378990 3379520 + [C] Inorganic pyrophosphatase 1775 cds-WP_012666886.1 CDS COG2105 3379625 3379975 - [S] Uncharacterized conserved protein cds-WP_012666885.1 CDS COG2911 3379978 3383751 - [S] Uncharacterized protein conserved in bacteria cds-WP_187298261.1 CDS COG0729 3383748 3385463 - [M] Outer membrane protein 1776 cds-WP_012666883.1 CDS COG1253 3386097 3387425 + [R] Hemolysins and related proteins containing CBS 1777 cds-WP_012666882.1 CDS ROG6034 3387475 3387681 - NA 1778 cysQ CDS COG1218 3388218 3388958 - [P] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase 1779 cds-WP_014538519.1 CDS COG0737 3389197 3389409 + [F] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 1780 cds-WP_012666880.1 CDS NA 3389610 3392915 + NA 1781 fklB CDS COG0545 3393126 3393746 - [O] FKBP-type peptidyl-prolyl cis-trans isomerases 1 1782 cds-WP_012666878.1 CDS COG3061 3394072 3394620 + [M] Cell envelope opacity-associated protein A 1783 rplI CDS COG0359 3394671 3395123 - [J] Ribosomal protein L9 rpsR CDS COG0238 3395162 3395389 - [J] Ribosomal protein S18 priB CDS COG2965 3395394 3395711 - [L] Primosomal replication protein N rpsF CDS COG0360 3395717 3396112 - [J] Ribosomal protein S6 1784 yjfP CDS COG1073 3396292 3397053 - [R] Hydrolases of the alpha/beta superfamily 1785 cds-WP_012666874.1 CDS COG0840 3397247 3399181 + [NT] Methyl-accepting chemotaxis protein bsmA CDS COG2913 3399183 3399551 + [J] Small protein A (tmRNA-binding) 1786 rlmB CDS COG0566 3399617 3400354 - [J] rRNA methylases rnr CDS COG0557 3400432 3402873 - [K] Exoribonuclease R cds-WP_014538516.1 CDS COG1959 3402890 3403141 - [K] Predicted transcriptional regulator 1787 cds-WP_012666870.1 CDS COG0104 3403339 3404637 - [F] Adenylosuccinate synthase 1788 cds-CPI84_RS16370 CDS COG3242 3404760 3404960 - [S] Uncharacterized protein conserved in bacteria 1789 hflC CDS COG0330 3405034 3406038 - [O] Membrane protease subunits, stomatin/prohibitin homologs hflK CDS COG0330 3406042 3407295 - [O] Membrane protease subunits, stomatin/prohibitin homologs hflX CDS COG2262 3407413 3408693 - [R] GTPases hfq CDS COG1923 3408923 3409234 - [R] Uncharacterized host factor I protein miaA CDS COG0324 3409336 3410286 - [J] tRNA delta(2)-isopentenylpyrophosphate transferase mutL CDS COG0323 3410279 3412105 - [L] DNA mismatch repair enzyme (predicted ATPase) amiB CDS COG0860 3412120 3413778 - [M] N-acetylmuramoyl-L-alanine amidase tsaE CDS COG0802 3413778 3414254 - [R] Predicted ATPase or kinase nnr CDS COG0063 3414251 3415771 - [G] Predicted sugar kinase 1790 rna-CPI84_RS16425 tRNA NA 3416464 3416539 - NA rna-CPI84_RS16430 tRNA NA 3416940 3417015 - NA 1791 cds-WP_104945148.1 CDS COG4096 3417447 3417989 + [V] Type I site-specific restriction-modification system, R 1792 cds-WP_012666858.1 CDS ROG3907 3418101 3418550 - NA cds-CPI84_RS19920 CDS NA 3418547 3419055 - NA 1793 rna-CPI84_RS16460 tRNA NA 3419461 3419536 - NA 1794 orn CDS COG1949 3419714 3420277 - [A] Oligoribonuclease (3'->5' exoribonuclease) 1795 rsgA CDS COG1162 3420369 3421430 + [R] Predicted GTPases 1796 asd_2 CDS COG0688 3421528 3422427 + [I] Phosphatidylserine decarboxylase mscM CDS COG3264 3422438 3425773 + [M] Small-conductance mechanosensitive channel 1797 epmA CDS COG2269 3425874 3426851 - [J] Truncated, possibly inactive, lysyl-tRNA synthetase (class 1798 cds-WP_012666851.1 CDS COG3040 3427023 3427547 + [M] Bacterial lipocalin 1799 cds-WP_012666850.1 CDS COG5510 3427600 3427731 - [S] Predicted small secreted protein 1800 efp CDS COG0231 3427946 3428512 - [J] Translation elongation factor P (EF-P)/translation initiation 1801 epmB CDS COG1509 3428554 3429582 + [E] Lysine 2,3-aminomutase 1802 cds-WP_014538509.1 CDS ROG5059 3429647 3429991 - NA 1803 groL CDS COG0459 3430183 3431832 - [O] Chaperonin GroEL (HSP60 family) cds-WP_004160183.1 CDS COG0234 3431869 3432162 - [O] Co-chaperonin GroES (HSP10) 1804 cds-WP_012666845.1 CDS COG3030 3432383 3432847 - [R] Protein affecting phage T7 exclusion by 1805 aspA CDS COG1027 3433215 3434651 + [E] Aspartate ammonia-lyase cds-WP_012666843.1 CDS COG2704 3434889 3436190 + [R] Anaerobic C4-dicarboxylate transporter 1806 cds-WP_012666842.1 CDS COG4232 3436398 3438113 + [OC] Thiol:disulfide interchange protein cds-WP_012666841.1 CDS ROG6516 3438153 3438731 + NA 1807 rna-CPI84_RS16550 tRNA NA 3438842 3438917 + NA 1808 cds-WP_012666840.1-2 CDS NA 3439194 3440153 - NA cds-WP_104945150.1 CDS ROG0271 3440187 3441749 - NA 1809 cds-WP_012666838.1-2 CDS NA 3441957 3442517 + NA 1810 cds-WP_012666837.1-2 CDS NA 3442638 3443363 - NA 1811 cds-WP_012666836.1-2 CDS NA 3443459 3444400 - NA 1812 cds-WP_012666835.1 CDS COG4227 3444497 3445477 - [L] Antirestriction protein 1813 cds-WP_012666834.1 CDS ROG2393 3445557 3446165 - NA 1814 cds-WP_012666833.1 CDS NA 3446244 3446552 - NA 1815 cds-WP_104945151.1 CDS NA 3446644 3447030 - NA 1816 cds-WP_012666831.1 CDS NA 3447165 3447509 - NA 1817 cds-WP_104945010.1-2 CDS ROG1837 3447852 3448736 - NA 1818 cds-WP_104945152.1 CDS NA 3448966 3449352 + NA 1819 cds-WP_012666828.1 CDS NA 3449844 3450458 - NA 1820 cds-WP_012666827.1 CDS NA 3450834 3451127 + NA 1821 cds-WP_148666345.1 CDS NA 3451334 3451555 + NA cds-WP_012666826.1 CDS COG3328 3451589 3452797 + [L] Transposase and inactivated derivatives 1822 cds-WP_012666825.1 CDS NA 3452885 3453649 + NA 1823 cds-WP_012666824.1 CDS NA 3453849 3454910 + NA 1824 cds-WP_012666458.1-11 CDS COG3335 3455458 3456498 + [L] Transposase and inactivated derivatives cds-WP_081441616.1 CDS NA 3456550 3456696 + NA cds-WP_041474085.1 CDS NA 3456698 3457102 + NA 1825 cds-CPI84_RS16655 CDS NA 3457166 3457410 - NA 1826 cds-WP_012666821.1 CDS COG0076 3457516 3458988 - [E] Glutamate decarboxylase and related PLP-dependent proteins cds-WP_014538497.1 CDS COG0160 3458993 3460387 - [E] 4-aminobutyrate aminotransferase and related aminotransferases 1827 cds-WP_012666819.1 CDS COG2207 3460590 3461477 - [K] AraC-type DNA-binding domain-containing proteins 1828 dkgA CDS COG0656 3461727 3462551 + [R] Aldo/keto reductases, related to diketogulonate reductase 1829 ftsP CDS COG2132 3462602 3464026 - [Q] Putative multicopper oxidases cds-WP_014538495.1 CDS COG0204 3464123 3464860 - [I] 1-acyl-sn-glycerol-3-phosphate acyltransferase 1830 parC CDS COG0188 3465034 3467310 - [L] Type IIA topoisomerase (DNA gyrase/topo II, 1831 cds-WP_014538494.1 CDS COG0834 3467571 3468341 - [ET] ABC-type amino acid transport/signal transduction systems, 1832 cds-WP_012666813.1 CDS COG1359 3468650 3468961 + [S] Uncharacterized conserved protein 1833 cds-WP_012666812.1 CDS NA 3469127 3469753 - NA 1834 parE CDS COG0187 3470466 3472361 - [L] Type IIA topoisomerase (DNA gyrase/topo II, yqiA CDS COG3150 3472416 3472994 - [R] Predicted esterase cpdA CDS COG1409 3472998 3473825 - [R] Predicted phosphohydrolases cds-WP_012666808.1 CDS COG3151 3473927 3474349 - [S] Uncharacterized protein conserved in bacteria nudF CDS COG0494 3474349 3474984 - [LR] NTP pyrophosphohydrolases including oxidative damage repair 1835 tolC CDS ROG3774 3475207 3476667 + NA 1836 cds-WP_012666805.1 CDS COG5463 3476832 3477512 + [S] Predicted integral membrane protein cds-WP_012666804.1 CDS COG0754 3477519 3478679 + [E] Glutathionylspermidine synthase 1837 ygiD CDS COG3384 3478797 3479582 - [S] Uncharacterized conserved protein 1838 ribB CDS COG0108 3479778 3480434 - [H] 3,4-dihydroxy-2-butanone 4-phosphate synthase 1839 cds-WP_012666801.1 CDS COG2960 3480839 3481123 + [S] Uncharacterized protein conserved in bacteria 1840 hldE CDS COG2870 3481168 3482604 - [M] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase glnE CDS COG1391 3482692 3485526 - [OT] Glutamine synthetase adenylyltransferase cds-WP_012666798.1 CDS COG3025 3485569 3486873 - [S] Uncharacterized conserved protein 1841 cds-WP_012666797.1 CDS COG3103 3487123 3487743 + [T] SH3 domain protein 1842 cds-WP_012666796.1 CDS COG0617 3487881 3489104 + [J] tRNA nucleotidyltransferase/poly(A) polymerase 1843 bacA CDS COG1968 3489175 3489996 - [V] Uncharacterized bacitracin resistance protein folB CDS COG1539 3490134 3490493 - [H] Dihydroneopterin aldolase 1844 plsY CDS COG0344 3490601 3491215 + [S] Predicted membrane protein 1845 tsaD CDS COG0533 3491225 3492238 - [O] Metal-dependent proteases with possible chaperone activity 1846 rpsU CDS COG0828 3492542 3492757 + [J] Ribosomal protein S21 dnaG CDS COG0358 3493051 3494796 + [L] DNA primase (bacterial type) rpoD CDS COG0568 3495120 3496961 + [K] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 1847 cds-WP_012666789.1 CDS COG0840 3497119 3498765 - [NT] Methyl-accepting chemotaxis protein 1848 mug CDS COG3663 3498940 3499446 - [L] G:T/U mismatch-specific DNA glycosylase 1849 cds-WP_012666787.1 CDS COG3203 3499634 3500785 - [M] Outer membrane protein (porin) 1850 opgB CDS COG1368 3501358 3503652 + [M] Phosphoglycerol transferase and related proteins, alkaline ampH CDS COG1680 3503680 3504921 + [V] Beta-lactamase class C and other penicillin 1851 cds-WP_104945155.1 CDS COG3423 3504940 3505269 - [K] Predicted transcriptional regulator 1852 cds-WP_012666783.1 CDS COG1476 3505400 3505657 + [K] Predicted transcriptional regulators 1853 cds-WP_104945202.1 CDS COG1464 3505800 3506603 + [P] ABC-type metal ion transport system, periplasmic 1854 cds-WP_012666781.1 CDS COG3318 3506653 3507210 - [R] Predicted metal-binding protein related to the 1855 cds-WP_104945156.1 CDS COG1112 3507790 3511128 + [L] Superfamily I DNA and RNA helicases 1856 cds-WP_012666777.1 CDS COG3486 3512496 3513824 + [Q] Lysine/ornithine N-monooxygenase cds-WP_012666776.1 CDS COG0665 3513814 3514875 + [E] Glycine/D-amino acid oxidases (deaminating) cds-WP_012666775.1 CDS COG0329 3514878 3515786 + [EM] Dihydrodipicolinate synthase/N-acetylneuraminate lyase cds-WP_012666774.1 CDS ROG1993 3515799 3516170 + NA 1857 cds-WP_014538482.1 CDS COG0119 3516254 3517258 + [E] Isopropylmalate/homocitrate/citramalate synthases cds-WP_012666772.1 CDS COG0637 3517248 3517919 + [R] Predicted phosphatase/phosphohexomutase cds-WP_012666771.1 CDS COG0143 3517916 3519892 + [J] Methionyl-tRNA synthetase 1858 cds-WP_012666770.1 CDS COG1028 3519945 3520670 + [IQR] Dehydrogenases with different specificities (related to asnB_2 CDS COG0367 3520728 3522566 + [E] Asparagine synthase (glutamine-hydrolyzing) cds-WP_012666768.1 CDS COG1791 3522603 3523184 + [S] Uncharacterized conserved protein, contains double-stranded beta-helix cds-WP_012666767.1 CDS NA 3523181 3524368 + NA cds-WP_014538481.1 CDS NA 3524409 3525926 + NA cds-WP_012666765.1 CDS COG0683 3525976 3526776 + [E] ABC-type branched-chain amino acid transport systems, cds-WP_012666764.1 CDS ROG5589 3526804 3528084 + NA cds-WP_012666763.1 CDS ROG5589 3528150 3529457 + NA 1859 cds-WP_012666762.1 CDS COG0454 3529617 3530057 + [KR] Histone acetyltransferase HPA2 and related acetyltransferases 1860 cds-CPI84_RS16965 CDS NA 3530405 3531013 + NA 1861 cds-CPI84_RS16970 CDS COG0582 3531012 3531350 - [L] Integrase 1862 rna-CPI84_RS16975 tRNA NA 3531540 3531624 - NA 1863 cds-WP_012666760.1 CDS ROG6913 3531974 3532483 + NA 1864 cds-WP_012666759.1 CDS COG0433 3532656 3534155 + [R] Predicted ATPase cds-WP_012666758.1 CDS COG2733 3534157 3535434 + [S] Predicted membrane protein 1865 lptG CDS COG0795 3535820 3536896 - [R] Predicted permeases lptF CDS COG0795 3536896 3537996 - [R] Predicted permeases 1866 pepA CDS COG0260 3538251 3539762 + [E] Leucyl aminopeptidase cds-WP_012666754.1 CDS COG2927 3539885 3540340 + [L] DNA polymerase III, chi subunit cds-WP_104945157.1 CDS COG0525 3540346 3543201 + [J] Valyl-tRNA synthetase 1867 cds-WP_012666752.1 CDS COG0454 3543416 3543919 + [KR] Histone acetyltransferase HPA2 and related acetyltransferases 1868 rraB CDS COG3076 3544164 3544586 - [S] Uncharacterized protein conserved in bacteria 1869 argF CDS COG0078 3544743 3545753 + [E] Ornithine carbamoyltransferase pyrB CDS COG0540 3546048 3546983 + [F] Aspartate carbamoyltransferase, catalytic chain pyrI CDS COG1781 3546996 3547526 + [F] Aspartate carbamoyltransferase, regulatory subunit ridA CDS COG0251 3547601 3547987 + [J] Putative translation initiation inhibitor, yjgF family 1870 cds-WP_104945158.1 CDS COG3525 3548077 3550449 - [G] N-acetyl-beta-hexosaminidase 1871 cds-WP_014538473.1 CDS COG0553 3550543 3553101 - [KL] Superfamily II DNA/RNA helicases, SNF2 family 1872 nrdD CDS COG1328 3553394 3555532 + [F] Oxygen-sensitive ribonucleoside-triphosphate reductase nrdG CDS COG0602 3555529 3555993 + [O] Organic radical activating enzymes 1873 cds-WP_012666742.1 CDS COG3766 3556006 3556404 - [S] Predicted membrane protein 1874 cds-WP_012666741.1 CDS COG2827 3556530 3556895 + [L] Predicted endonuclease containing a URI domain 1875 cds-WP_012666740.1 CDS COG3153 3556820 3557323 - [R] Predicted acetyltransferase 1876 cds-WP_012666739.1 CDS COG2141 3557768 3558775 + [C] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and 1877 cds-WP_012666738.1 CDS COG0513 3558852 3560768 - [LKJ] Superfamily II DNA and RNA helicases yrbN CDS NA 3560761 3560841 - NA 1878 nlpI CDS COG4785 3560945 3561829 - [R] Lipoprotein NlpI, contains TPR repeats pnp CDS COG1185 3561958 3564090 - [J] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) rpsO CDS COG0184 3564393 3564662 - [J] Ribosomal protein S15P/S13E truB CDS COG0130 3564770 3565714 - [J] Pseudouridine synthase rbfA CDS COG0858 3565714 3566127 - [J] Ribosome-binding factor A infB CDS COG0532 3566308 3568998 - [J] Translation initiation factor 2 (IF-2; GTPase) nusA CDS COG0195 3569023 3570528 - [K] Transcription elongation factor rimP CDS COG0779 3570553 3571005 - [S] Uncharacterized protein conserved in bacteria 1879 rna-CPI84_RS17145 tRNA NA 3571217 3571293 - NA rna-CPI84_RS17150 tRNA NA 3571342 3571428 - NA secG CDS COG1314 3571486 3571818 - [U] Preprotein translocase subunit SecG 1880 glmM CDS COG1109 3572128 3573462 - [G] Phosphomannomutase folP CDS COG0294 3573467 3574303 - [H] Dihydropteroate synthase and related enzymes ftsH CDS COG0465 3574389 3576323 - [O] ATP-dependent Zn proteases rlmE CDS COG0293 3576438 3577067 - [J] 23S rRNA methylase 1881 yhbY CDS COG1534 3577195 3577488 + [J] Predicted RNA-binding protein containing KH domain, 1882 greA CDS COG0782 3577813 3578295 - [K] Transcription elongation factor 1883 dacB CDS COG2027 3578545 3579978 + [M] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) cds-CPI84_RS17195 CDS COG0745 3579983 3580611 + [TK] Response regulators consisting of a CheY-like 1884 cgtA CDS COG0536 3580655 3581833 - [R] Predicted GTPase cds-CPI84_RS17205 CDS COG0697 3581830 3582465 - [GER] Permeases of the drug/metabolite transporter (DMT) 1885 rpmA CDS COG0211 3582605 3582862 - [J] Ribosomal protein L27 rplU CDS COG0261 3582878 3583189 - [J] Ribosomal protein L21 1886 ispB CDS COG0142 3583447 3584421 + [H] Geranylgeranyl pyrophosphate synthase 1887 cds-WP_012666717.1 CDS COG3423 3584732 3584992 + [K] Predicted transcriptional regulator 1888 murA CDS COG0766 3585043 3586305 - [M] UDP-N-acetylglucosamine enolpyruvyl transferase ibaG CDS COG5007 3586382 3586636 - [K] Predicted transcriptional regulator, BolA superfamily 1889 mlaB CDS COG3113 3586863 3587159 - [R] Predicted NTP binding protein (contains STAS mlaC CDS COG2854 3587159 3587794 - [Q] ABC-type transport system involved in resistance mlaD CDS COG1463 3587806 3588354 - [Q] ABC-type transport system involved in resistance mlaE CDS COG0767 3588359 3589141 - [Q] ABC-type transport system involved in resistance mlaF CDS COG1127 3589149 3589961 - [Q] ABC-type transport system involved in resistance 1890 cds-WP_012666709.1 CDS COG0530 3590185 3591165 + [P] Ca2+/Na+ antiporter kdsD CDS COG0794 3591181 3592167 + [M] Predicted sugar phosphate isomerase involved in kdsC CDS COG1778 3592184 3592750 + [R] Low specificity phosphatase (HAD superfamily) lptC CDS COG3117 3592747 3593316 + [S] Uncharacterized protein conserved in bacteria lptA CDS COG1934 3593294 3593845 + [S] Uncharacterized protein conserved in bacteria lptB CDS COG1137 3593851 3594576 + [R] ABC-type (unclassified) transport system, ATPase component rpoN CDS COG1508 3594625 3596058 + [K] DNA-directed RNA polymerase specialized sigma subunit, hpf CDS COG1544 3596081 3596368 + [J] Ribosome-associated protein Y (PSrp-1) ptsN CDS COG1762 3596547 3597029 + [GT] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) rapZ CDS COG1660 3597224 3598078 + [R] Predicted P-loop-containing kinase npr CDS COG1925 3598075 3598347 + [G] Phosphotransferase system, HPr-related proteins 1891 mtgA CDS COG0744 3598422 3599147 - [M] Membrane carboxypeptidase (penicillin-binding protein) 1892 arcB CDS COG0642 3599937 3602276 - [T] Signal transduction histidine kinase 1893 cds-WP_104945159.1 CDS COG0069 3603260 3608794 + [E] Glutamate synthase domain 2 cds-WP_012666695.1 CDS COG0369 3608846 3610603 + [P] Sulfite reductase, alpha subunit (flavoprotein) 1894 cds-WP_012666694.1 CDS NA 3610701 3611252 - NA 1895 cds-WP_012666693.1 CDS COG3209 3611436 3614084 - [M] Rhs family protein 1896 cds-WP_012666692.1 CDS ROG6611 3614371 3618441 - NA cds-WP_012666691.1 CDS ROG0626 3618496 3622128 - NA cds-WP_012666690.1 CDS NA 3622170 3625454 - NA 1897 cds-WP_148217820.1 CDS NA 3625564 3625770 - NA 1898 sspB CDS COG2969 3626560 3627057 - [R] Stringent starvation protein B sspA CDS ROG1850 3627062 3627703 - NA 1899 rpsI CDS COG0103 3628012 3628404 - [J] Ribosomal protein S9 rplM CDS COG0102 3628420 3628848 - [J] Ribosomal protein L13 1900 cds-WP_012666686.1 CDS COG1485 3629093 3630220 - [R] Predicted ATPase 1901 cds-WP_012666685.1 CDS COG3105 3630398 3630796 + [S] Uncharacterized protein conserved in bacteria 1902 cds-WP_012666684.1 CDS COG0265 3630910 3632298 + [O] Trypsin-like serine proteases, typically periplasmic, contain degS CDS COG0265 3632377 3633438 + [O] Trypsin-like serine proteases, typically periplasmic, contain 1903 mdh CDS COG0039 3633477 3634412 - [C] Malate/lactate dehydrogenases 1904 argR CDS COG1438 3634854 3635324 + [K] Arginine repressor 1905 yhcN CDS NA 3635820 3636083 + NA 1906 yhcN_2 CDS NA 3636195 3636464 + NA 1907 aaeB CDS COG1289 3636672 3638630 - [S] Predicted membrane protein aaeA CDS COG1566 3638644 3639576 - [V] Multidrug resistance efflux pump cds-WP_012666676.1 CDS ROG4895 3639584 3639787 - NA 1908 cds-WP_041474078.1 CDS NA 3640335 3641000 + NA 1909 cds-WP_012666672.1 CDS NA 3641346 3641852 + NA 1910 tldD CDS COG0312 3642133 3643578 - [R] Predicted Zn-dependent proteases and their inactivated yhdP CDS COG3164 3643687 3647481 - [S] Predicted membrane protein rng CDS COG1530 3647550 3649019 - [J] Ribonucleases G and E cds-WP_012666668.1 CDS COG0424 3649021 3649602 - [D] Nucleotide-binding protein implicated in inhibition of mreD CDS COG2891 3649612 3650100 - [M] Cell shape-determining protein mreC CDS COG1792 3650097 3651119 - [M] Cell shape-determining protein mreB CDS COG1077 3651189 3652232 - [D] Actin-like ATPase involved in cell morphogenesis 1911 csrD CDS COG3706 3652547 3654496 - [T] Response regulator containing a CheY-like receiver 1912 cds-WP_012666664.1 CDS COG0604 3654721 3655698 + [CR] NADPH:quinone reductase and related Zn-dependent oxidoreductases msrP CDS COG2041 3655750 3656754 + [R] Sulfite oxidase and related enzymes msrQ CDS COG2717 3656759 3657361 + [S] Predicted membrane protein 1913 aroQ CDS COG0757 3657584 3658036 + [E] 3-dehydroquinate dehydratase II accB CDS COG0511 3658058 3658528 + [I] Biotin carboxyl carrier protein accC CDS COG0439 3658540 3659889 + [I] Biotin carboxylase 1914 cds-WP_012666658.1 CDS COG3924 3659972 3660214 + [S] Predicted membrane protein panF CDS COG4145 3660204 3661658 + [H] Na+/panthothenate symporter prmA CDS COG2264 3661670 3662551 + [J] Ribosomal protein L11 methylase 1915 dusB CDS COG0042 3662858 3663823 + [J] tRNA-dihydrouridine synthase fis CDS COG2901 3663849 3664145 + [KL] Factor for inversion stimulation Fis, transcriptional 1916 lpxP CDS COG1560 3664536 3665456 + [M] Lauroyl/myristoyl acyltransferase 1917 cds-WP_012666652.1 CDS COG0834 3665798 3666823 + [ET] ABC-type amino acid transport/signal transduction systems, cds-WP_012666651.1 CDS COG4597 3666891 3668069 + [E] ABC-type amino acid transport system, permease cds-WP_012666650.1 CDS COG0765 3668083 3669183 + [E] ABC-type amino acid transport system, permease cds-WP_222838328.1 CDS COG1126 3669231 3669956 + [E] ABC-type polar amino acid transport system, 1918 rrf_4 rRNA NA 3670137 3670252 - NA rna-CPI84_RS17600 tRNA NA 3670288 3670363 - NA rrf_5 rRNA NA 3670412 3670527 - NA rna-CPI84_RS17610 rRNA NA 3670761 3673754 - NA rna-CPI84_RS17615 tRNA NA 3673961 3674036 - NA rna-CPI84_RS17620 tRNA NA 3674188 3674264 - NA rna-CPI84_RS17625 rRNA NA 3674338 3675877 - NA 1919 purH CDS COG0138 3676512 3678101 + [F] AICAR transformylase/IMP cyclohydrolase PurH (only IMP purD CDS COG0151 3678116 3679396 + [F] Phosphoribosylamine-glycine ligase 1920 cds-WP_104945161.1 CDS COG5633 3679472 3680140 - [R] Predicted periplasmic lipoprotein 1921 hupA CDS COG0776 3680274 3680546 - [L] Bacterial nucleoid DNA-binding protein 1922 cds-WP_012666644.1 CDS COG3068 3680735 3681325 - [S] Uncharacterized protein conserved in bacteria nfi CDS COG1515 3681392 3682057 - [L] Deoxyinosine 3'endonuclease (endonuclease V) hemE CDS COG0407 3682094 3683161 - [H] Uroporphyrinogen-III decarboxylase 1923 nudC CDS COG2816 3683383 3684156 - [L] NTP pyrophosphohydrolases containing a Zn-finger, probably 1924 cds-WP_012666640.1 CDS COG3160 3684229 3684735 + [K] Regulator of sigma D 1925 thiC CDS COG0422 3685110 3686984 + [H] Thiamine biosynthesis protein ThiC thiE CDS COG0352 3686981 3687625 + [H] Thiamine monophosphate synthase 1926 cds-WP_104945162.1 CDS COG4571 3688423 3689364 + [M] Outer membrane protease 1927 cds-WP_012666636.1 CDS NA 3689514 3690275 - NA cds-WP_012666635.1 CDS NA 3690300 3691088 - NA 1928 cds-WP_148666349.1 CDS COG4580 3691333 3692118 - [G] Maltoporin (phage lambda and maltose receptor) 1929 cds-WP_012666633.1 CDS NA 3692525 3693304 - NA 1930 cds-WP_012666632.1 CDS ROG4920 3693500 3694012 - NA cds-WP_012666631.1 CDS COG3121 3694024 3694794 - [NU] P pilus assembly protein, chaperone PapD faeD CDS COG3188 3694787 3697213 - [NU] P pilus assembly protein, porin PapC cds-WP_104945165.1 CDS NA 3697225 3697779 - NA 1931 cds-WP_104945166.1 CDS COG1357 3698713 3699312 + [S] Uncharacterized low-complexity proteins 1932 rpoC CDS COG0086 3699515 3703738 - [K] DNA-directed RNA polymerase, beta' subunit/160 kD rpoB CDS COG0085 3703824 3707852 - [K] DNA-directed RNA polymerase, beta subunit/140 kD rplL CDS COG0222 3708187 3708552 - [J] Ribosomal protein L7/L12 rplJ CDS COG0244 3708620 3709123 - [J] Ribosomal protein L10 rplA CDS COG0081 3709483 3710187 - [J] Ribosomal protein L1 rplK CDS COG0080 3710191 3710619 - [J] Ribosomal protein L11 nusG CDS COG0250 3710803 3711348 - [K] Transcription antiterminator secE CDS COG0690 3711350 3711733 - [U] Preprotein translocase subunit SecE tuf_2 CDS COG0050 3712003 3713187 - [J] GTPases - translation elongation factors 1933 rna-CPI84_RS17780 tRNA NA 3713299 3713374 - NA rna-CPI84_RS17785 tRNA NA 3713381 3713455 - NA rna-CPI84_RS17790 tRNA NA 3713672 3713756 - NA rna-CPI84_RS17795 tRNA NA 3713769 3713844 - NA 1934 coaA CDS COG1072 3714332 3715282 + [H] Panthothenate kinase 1935 birA CDS COG0340 3715309 3716271 - [H] Biotin-(acetyl-CoA carboxylase) ligase murB CDS COG0812 3716268 3717305 - [M] UDP-N-acetylmuramate dehydrogenase 1936 rrf_6 rRNA NA 3717564 3717679 - NA rna-CPI84_RS17820 rRNA NA 3717914 3720908 - NA rna-CPI84_RS17825 tRNA NA 3721115 3721190 - NA rna-CPI84_RS17830 tRNA NA 3721342 3721418 - NA rna-CPI84_RS17835 rRNA NA 3721492 3723031 - NA 1937 hemG CDS COG4635 3723454 3723990 - [CH] Flavodoxin trkH CDS COG0168 3724005 3725456 - [P] Trk-type K+ transport systems, membrane components cds-WP_012666616.1 CDS COG1739 3725485 3726096 - [S] Uncharacterized conserved protein pepQ CDS COG0006 3726096 3727427 - [E] Xaa-Pro aminopeptidase 1938 fadB CDS COG1250 3727613 3729799 + [I] 3-hydroxyacyl-CoA dehydrogenase fadA CDS COG0183 3729810 3730973 + [I] Acetyl-CoA acetyltransferase 1939 fre CDS COG0543 3731078 3731779 - [HC] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases ubiD CDS COG0043 3731824 3733308 - [H] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases 1940 rfaH CDS COG0250 3733557 3734057 + [K] Transcription antiterminator 1941 tatD CDS COG0084 3734086 3734865 - [L] Mg-dependent DNase tatC CDS COG0805 3734941 3735702 - [U] Sec-independent protein secretion pathway component TatC tatB CDS COG1826 3735705 3736244 - [U] Sec-independent protein secretion pathway components tatA CDS COG1826 3736248 3736505 - [U] Sec-independent protein secretion pathway components ubiB CDS COG0661 3736625 3738262 - [R] Predicted unusual protein kinase cds-WP_012666604.1 CDS COG3165 3738259 3738864 - [S] Uncharacterized protein conserved in bacteria ubiE CDS COG2226 3738877 3739632 - [H] Methylase involved in ubiquinone/menaquinone biosynthesis 1942 rmuC CDS COG1322 3739707 3741242 - [S] Uncharacterized protein conserved in bacteria 1943 udp CDS COG2820 3741417 3742181 - [F] Uridine phosphorylase 1944 cds-WP_014538446.1 CDS COG0412 3742470 3743306 + [Q] Dienelactone hydrolase and related enzymes 1945 metE CDS COG0620 3743366 3745639 - [E] Methionine synthase II (cobalamin-independent) 1946 metR CDS COG0583 3745790 3746728 + [K] Transcriptional regulator 1947 cds-WP_012666597.1 CDS COG4807 3746832 3747302 + [S] Uncharacterized protein conserved in bacteria 1948 glpT CDS COG2271 3747673 3749019 + [G] Sugar phosphate permease 1949 yigL CDS COG0561 3749118 3749918 - [R] Predicted hydrolases of the HAD superfamily pldB CDS COG2267 3749979 3750971 - [I] Lysophospholipase 1950 rhtB CDS COG1280 3751083 3751706 + [E] Putative threonine efflux protein 1951 recQ CDS COG0514 3751765 3753597 - [L] Superfamily II DNA helicase 1952 pldA CDS COG2829 3753660 3754538 - [M] Outer membrane phospholipase A 1953 cds-WP_012666590.1 CDS COG2050 3754711 3755181 + [Q] Uncharacterized protein, possibly involved in aromatic 1954 corA CDS COG0598 3755201 3756160 - [P] Mg2+ and Co2+ transporters 1955 uvrD CDS COG0210 3756461 3758623 - [L] Superfamily I DNA and RNA helicases yigB CDS COG1011 3758681 3759397 - [R] Predicted hydrolase (HAD superfamily) xerC_9 CDS COG4973 3759397 3760305 - [L] Site-specific recombinase XerC cds-WP_012666585.1 CDS COG3159 3760302 3761012 - [S] Uncharacterized protein conserved in bacteria dapF CDS COG0253 3761009 3761833 - [E] Diaminopimelate epimerase cds-WP_012666583.1 CDS COG5567 3761861 3762061 - [N] Predicted small periplasmic lipoprotein 1956 cds-WP_104945169.1 CDS COG3072 3762166 3764721 - [F] Adenylate cyclase 1957 hemC CDS COG0181 3765015 3765956 + [H] Porphobilinogen deaminase hemD CDS COG1587 3765953 3766702 + [H] Uroporphyrinogen-III synthase hemX CDS COG2959 3766840 3767979 + [H] Uncharacterized enzyme of heme biosynthesis hemY CDS COG3071 3767982 3769172 + [H] Uncharacterized enzyme of heme biosynthesis 1958 rna-CPI84_RS18050 tRNA NA 3769614 3769690 - NA rna-CPI84_RS18055 tRNA NA 3769817 3769893 - NA rna-CPI84_RS18060 tRNA NA 3769922 3770008 - NA rna-CPI84_RS18065 tRNA NA 3770022 3770097 - NA rna-CPI84_RS18070 tRNA NA 3770161 3770237 - NA 1959 rffM CDS COG1922 3770415 3771155 - [M] Teichoic acid biosynthesis proteins wzyE CDS NA 3771168 3772526 - NA cds-WP_012666575.1 CDS ROG4451 3772523 3773599 - NA wzxE CDS COG2244 3773596 3774846 - [R] Membrane protein involved in the export rffA CDS COG0399 3774848 3775978 - [M] Predicted pyridoxal phosphate-dependent enzyme apparently involved rffC CDS COG0454 3775975 3776676 - [KR] Histone acetyltransferase HPA2 and related acetyltransferases rfbA_2 CDS COG1209 3776654 3777535 - [M] dTDP-glucose pyrophosphorylase rfbB_2 CDS COG1088 3777555 3778622 - [M] dTDP-D-glucose 4,6-dehydratase wecC CDS COG0677 3778619 3779881 - [M] UDP-N-acetyl-D-mannosaminuronate dehydrogenase wecB CDS COG0381 3779886 3781007 - [M] UDP-N-acetylglucosamine 2-epimerase wzzE CDS COG3765 3781058 3782086 - [M] Chain length determinant protein wecA CDS NA 3782113 3783219 - NA 1960 rho CDS COG1158 3783511 3784770 - [K] Transcription termination factor 1961 trxA CDS COG0526 3785139 3785468 - [OC] Thiol-disulfide isomerase and thioredoxins 1962 rhlB CDS COG0513 3785598 3786890 + [LKJ] Superfamily II DNA and RNA helicases ppx_2 CDS COG0248 3786897 3788381 + [FP] Exopolyphosphatase 1963 cds-WP_104945174.1 CDS NA 3788437 3789225 - NA cds-WP_041474370.1 CDS NA 3789210 3789602 - NA 1964 rep CDS COG0210 3789987 3792008 - [L] Superfamily I DNA and RNA helicases 1965 ppiC CDS COG0760 3792097 3792378 + [O] Parvulin-like peptidyl-prolyl isomerase 1966 ilvC CDS COG0059 3792437 3793915 - [EH] Ketol-acid reductoisomerase 1967 ilvY CDS COG0583 3794081 3794962 + [K] Transcriptional regulator 1968 ilvA CDS COG1171 3794959 3796509 - [E] Threonine dehydratase ilvD CDS COG0129 3796515 3798365 - [EG] Dihydroxyacid dehydratase/phosphogluconate dehydratase cds-WP_012439952.1 CDS COG0115 3798432 3799358 - [EH] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase ilvM CDS COG3978 3799377 3799634 - [S] Acetolactate synthase (isozyme II), small (regulatory) ilvG CDS COG0028 3799631 3801277 - [EH] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate 1969 cds-WP_104945175.1 CDS NA 3801418 3801516 - NA 1970 cds-WP_012666553.1 CDS COG0606 3801851 3803371 + [O] Predicted ATPase with chaperone activity 1971 cds-WP_012666552.1 CDS COG3085 3803406 3803744 - [S] Uncharacterized protein conserved in bacteria 1972 hdfR CDS COG0583 3803865 3804692 + [K] Transcriptional regulator 1973 rna-CPI84_RS18230 tRNA NA 3804807 3804882 - NA rna-CPI84_RS18235 tRNA NA 3804890 3804966 - NA rrf_7 rRNA NA 3805067 3805182 - NA rna-CPI84_RS18245 rRNA NA 3805394 3808388 - NA rna-CPI84_RS18250 tRNA NA 3808611 3808686 - NA rna-CPI84_RS18255 rRNA NA 3808758 3810297 - NA 1974 murI CDS COG0796 3810706 3811557 - [M] Glutamate racemase 1975 trmA CDS COG2265 3811759 3812862 + [J] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 1976 cds-WP_012666548.1 CDS NA 3812962 3813315 - NA fabR CDS COG1309 3813312 3813968 - [K] Transcriptional regulator 1977 sthA CDS COG1249 3814161 3815561 + [C] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) 1978 oxyR CDS COG0583 3815535 3816458 - [K] Transcriptional regulator 1979 cds-WP_012666544.1 CDS COG0678 3816594 3817325 + [O] Peroxiredoxin 1980 argH CDS COG0165 3817377 3818750 - [E] Argininosuccinate lyase cds-WP_012666542.1 CDS COG0137 3818843 3820057 - [E] Argininosuccinate synthase argB CDS COG0548 3820089 3820865 - [E] Acetylglutamate kinase 1981 argE CDS COG0624 3821037 3822188 + [E] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 1982 ppc CDS COG2352 3822423 3825074 + [C] Phosphoenolpyruvate carboxylase 1983 vapB CDS COG4456 3825297 3825467 + [S] Virulence-associated protein and related proteins 1984 metF CDS COG0685 3825594 3826505 - [E] 5,10-methylenetetrahydrofolate reductase cds-WP_012666535.1 CDS COG0527 3826764 3829199 - [E] Aspartokinases metB CDS COG0626 3829202 3830362 - [E] Cystathionine beta-lyases/cystathionine gamma-synthases 1985 metJ CDS COG3060 3830606 3830923 + [KE] Transcriptional regulator of met regulon 1986 cds-WP_012666533.1 CDS NA 3831348 3832418 - NA cds-WP_012666532.1 CDS COG0463 3832462 3833523 - [M] Glycosyltransferases involved in cell wall biogenesis cds-WP_012666531.1 CDS COG1134 3833560 3834267 - [GM] ABC-type polysaccharide/polyol phosphate transport system, ATPase cds-WP_012666530.1 CDS COG1682 3834271 3835041 - [GM] ABC-type polysaccharide/polyol phosphate export systems, permease 1987 cds-WP_012666529.1 CDS NA 3835449 3835670 - NA 1988 cds-WP_014538433.1 CDS NA 3835770 3835952 - NA 1989 rpmE CDS COG0254 3836086 3836298 - [J] Ribosomal protein L31 1990 priA CDS COG1198 3836515 3838713 + [L] Primosomal protein N' (replication factor Y) 1991 cytR CDS COG1609 3838923 3839960 + [K] Transcriptional regulators 1992 ftsN CDS COG3087 3840131 3841018 + [D] Cell division protein hslV CDS COG5405 3841110 3841640 + [O] ATP-dependent protease HslVU (ClpYQ), peptidase subunit hslU CDS COG1220 3841653 3842984 + [O] ATP-dependent protease HslVU (ClpYQ), ATPase subunit 1993 rraA CDS COG0684 3843168 3843653 + [H] Demethylmenaquinone methyltransferase 1994 zapB CDS COG3074 3843749 3843988 - [S] Uncharacterized protein conserved in bacteria 1995 cds-WP_012666522.1 CDS COG0580 3844428 3845261 + [G] Glycerol uptake facilitator and related permeases glpK CDS COG0554 3845305 3846819 + [C] Glycerol kinase 1996 cds-WP_012666520.1 CDS COG0798 3846875 3847867 - [P] Arsenite efflux pump ACR3 and related 1997 glpX CDS COG1494 3848081 3849091 + [G] Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins 1998 emrD CDS NA 3849138 3850316 - NA cds-WP_197525172.1 CDS NA 3850352 3850513 - NA 1999 fpr CDS COG1018 3850626 3851372 + [C] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 2000 cds-WP_012666515.1 CDS COG3152 3851363 3851806 - [S] Predicted membrane protein 2001 cds-WP_012666514.1 CDS NA 3851897 3852490 + NA 2002 tpiA CDS COG0149 3852609 3853376 + [G] Triosephosphate isomerase 2003 mqo_2 CDS COG0579 3853756 3855318 + [R] Predicted dehydrogenase 2004 cds-WP_012666511.1 CDS COG0384 3855669 3856520 + [R] Predicted epimerase, PhzC/PhzF homolog 2005 cds-WP_012666510.1 CDS ROG2705 3856601 3857110 - NA 2006 cds-WP_012666509.1 CDS ROG0313 3857354 3858658 - NA cds-WP_012666508.1 CDS COG3239 3858648 3859541 - [I] Fatty acid desaturase cds-WP_012666507.1 CDS COG3694 3859543 3860313 - [R] ABC-type uncharacterized transport system, permease component cds-WP_187298276.1 CDS COG4587 3860315 3861085 - [R] ABC-type uncharacterized transport system, permease component cds-WP_012666505.1 CDS COG4586 3861123 3862142 - [R] ABC-type uncharacterized transport system, ATPase component cds-WP_012666504.1 CDS ROG5589 3862139 3863362 - NA cds-WP_012666503.1 CDS COG1541 3863370 3864752 - [H] Coenzyme F390 synthetase cds-WP_012666502.1 CDS COG1834 3864745 3865845 - [E] N-Dimethylarginine dimethylaminohydrolase cds-WP_014538427.1 CDS COG0421 3865862 3866719 - [E] Spermidine synthase speD_2 CDS COG1586 3866700 3867095 - [E] S-adenosylmethionine decarboxylase 2007 yhjD CDS COG1295 3867966 3868988 + [S] Predicted membrane protein 2008 cds-WP_104945176.1 CDS COG2134 3869052 3869831 - [I] CDP-diacylglycerol pyrophosphatase 2009 cds-WP_012666497.1 CDS COG1613 3870018 3871007 - [P] ABC-type sulfate transport system, periplasmic component 2010 pfkA CDS COG0205 3871151 3872113 - [G] 6-phosphofructokinase 2011 fieF CDS COG0053 3872320 3873222 - [P] Predicted Co/Zn/Cd cation transporters 2012 cpxP CDS COG3678 3873358 3873867 - [UNTP] P pilus assembly/Cpx signaling pathway, periplasmic 2013 cpxR CDS COG0745 3874020 3874721 + [TK] Response regulators consisting of a CheY-like cpxA CDS COG2205 3874718 3876097 + [T] Osmosensitive K+ channel histidine kinase trmL CDS COG0219 3876136 3876606 + [J] Predicted rRNA methylase (SpoU class) 2014 cysE CDS COG1045 3876705 3877523 - [E] Serine acetyltransferase gpsA CDS COG0240 3877588 3878607 - [C] Glycerol-3-phosphate dehydrogenase secB CDS COG1952 3878607 3879068 - [U] Preprotein translocase subunit SecB grxC CDS COG0695 3879151 3879402 - [O] Glutaredoxin and related proteins cds-WP_012666486.1 CDS COG0607 3879442 3879873 - [P] Rhodanese-related sulfurtransferase 2015 envC CDS COG4942 3880224 3881531 + [D] Membrane-bound metallopeptidase cds-WP_012666484.1 CDS COG2861 3881538 3882452 + [S] Uncharacterized protein conserved in bacteria 2016 rfaD CDS COG0451 3882645 3883577 + [MG] Nucleoside-diphosphate-sugar epimerases rfaF CDS COG0859 3883592 3884638 + [M] ADP-heptose:LPS heptosyltransferase rfaC CDS COG0859 3884639 3885604 + [M] ADP-heptose:LPS heptosyltransferase cds-WP_012666480.1 CDS COG0438 3885601 3886767 + [M] Glycosyltransferase cds-WP_012666479.1 CDS COG3307 3886788 3888032 + [M] Lipid A core - O-antigen ligase cds-WP_012666478.1 CDS COG0463 3888026 3889006 + [M] Glycosyltransferases involved in cell wall biogenesis 2017 cds-WP_012666477.1 CDS COG0859 3889019 3890122 - [M] ADP-heptose:LPS heptosyltransferase cds-WP_012666476.1 CDS ROG3045 3890124 3891080 - NA 2018 rfaQ CDS COG0859 3891241 3892314 + [M] ADP-heptose:LPS heptosyltransferase cds-WP_012666474.1 CDS COG0438 3892311 3893438 + [M] Glycosyltransferase cds-WP_104945177.1 CDS COG0438 3893442 3894539 + [M] Glycosyltransferase 2019 cds-WP_012666472.1 CDS COG0859 3894536 3895549 - [M] ADP-heptose:LPS heptosyltransferase 2020 waaA CDS COG1519 3895918 3897192 + [M] 3-deoxy-D-manno-octulosonic-acid transferase cds-WP_012666470.1 CDS COG1216 3897193 3897969 + [R] Predicted glycosyltransferases coaD CDS COG0669 3897966 3898442 + [H] Phosphopantetheine adenylyltransferase 2021 mutM CDS COG0266 3898452 3899261 - [L] Formamidopyrimidine-DNA glycosylase rpmG CDS COG0267 3899369 3899536 - [J] Ribosomal protein L33 rpmB CDS COG0227 3899553 3899789 - [J] Ribosomal protein L28 2022 radC CDS COG2003 3900084 3900755 - [L] DNA repair proteins 2023 coaBC CDS COG0452 3900953 3902164 + [H] Phosphopantothenoylcysteine synthetase/decarboxylase dut CDS COG0756 3902142 3902600 + [F] dUTPase 2024 slmA CDS COG1309 3902715 3903311 + [K] Transcriptional regulator 2025 pyrE CDS COG0461 3903384 3904025 - [F] Orotate phosphoribosyltransferase rph CDS COG0689 3904082 3904798 - [J] RNase PH 2026 cds-WP_012666461.1 CDS COG1972 3905010 3906194 + [F] Nucleoside permease 2027 cds-WP_012666460.1 CDS ROG3554 3906229 3906657 - NA 2028 cds-WP_012666459.1 CDS COG1561 3906808 3907671 + [S] Uncharacterized stress-induced protein 2029 cds-CPI84_RS18770 CDS COG0582 3907862 3908089 + [L] Integrase 2030 cds-WP_012666458.1-12 CDS COG3335 3908095 3909135 - [L] Transposase and inactivated derivatives 2031 cds-WP_081441615.1 CDS COG0582 3909221 3910276 + [L] Integrase 2032 cds-WP_012666456.1 CDS NA 3910405 3911289 + NA 2033 cds-WP_012666455.1 CDS ROG3992 3911393 3911617 + NA cds-WP_012666454.1 CDS NA 3911617 3912033 + NA cds-WP_012666453.1 CDS COG3617 3912049 3912636 + [K] Prophage antirepressor cds-WP_012442141.1 CDS NA 3912636 3912809 + NA 2034 cds-WP_023653298.1 CDS NA 3913171 3913353 - NA 2035 cds-WP_187298262.1 CDS NA 3913295 3913747 + NA cds-WP_012666451.1 CDS NA 3913740 3913985 + NA cds-WP_014538418.1 CDS NA 3913982 3914158 + NA cds-WP_012666450.1 CDS NA 3914155 3914364 + NA cds-WP_012666449.1 CDS NA 3914361 3914972 + NA cds-WP_012666448.1 CDS COG5519 3914982 3917810 + [L] Superfamily II helicase and inactivated derivatives 2036 cds-WP_012666445.1 CDS NA 3918490 3918819 + NA cds-WP_012666444.1 CDS NA 3918829 3921153 + NA cds-WP_012666443.1 CDS ROG8538 3921205 3921795 + NA 2037 cds-WP_012666442.1 CDS NA 3921944 3922132 + NA 2038 cds-WP_012666441.1 CDS ROG2750 3922210 3922641 - NA 2039 cds-WP_012666440.1 CDS NA 3922707 3923081 - NA 2040 cds-WP_012666439.1 CDS COG2824 3923525 3923863 + [P] Uncharacterized Zn-ribbon-containing protein involved in phosphonate 2041 cds-WP_012666438.1 CDS COG2211 3924026 3925390 + [G] Na+/melibiose symporter and related transporters 2042 cds-WP_012666437.1 CDS COG2771 3925742 3926386 - [K] DNA-binding HTH domain-containing proteins 2043 cds-WP_012666436.1 CDS COG2860 3926853 3927470 + [S] Predicted membrane protein 2044 ligB CDS COG0272 3927471 3929153 - [L] NAD-dependent DNA ligase (contains BRCT domain 2045 gmk CDS COG0194 3929413 3930036 + [F] Guanylate kinase rpoZ CDS COG1758 3930093 3930368 + [K] DNA-directed RNA polymerase, subunit K/omega spoT CDS COG0317 3930388 3932511 + [TK] Guanosine polyphosphate pyrophosphohydrolases/synthetases trmH CDS COG0566 3932608 3933303 + [J] rRNA methylases recG CDS COG1200 3933303 3935384 + [LK] RecG-like helicase 2046 cds-WP_012666430.1 CDS COG2233 3935627 3937015 + [F] Xanthine/uracil permeases 2047 cds-WP_014538414.1 CDS COG2982 3937138 3938820 + [M] Uncharacterized protein involved in outer membrane 2048 rluF CDS COG1187 3938904 3939782 + [J] 16S rRNA uridine-516 pseudouridylate synthase and 2049 fabY CDS COG0454 3939790 3940728 - [KR] Histone acetyltransferase HPA2 and related acetyltransferases dtd CDS COG1490 3940788 3941225 - [J] D-Tyr-tRNAtyr deacylase cds-WP_012666425.1 CDS COG1295 3941222 3942094 - [S] Predicted membrane protein yihX CDS COG1011 3942098 3942709 - [R] Predicted hydrolase (HAD superfamily) 2050 typA CDS COG1217 3942910 3944733 - [T] Predicted membrane GTPase involved in stress 2051 glnA CDS COG0174 3945169 3946578 + [E] Glutamine synthetase glnL CDS COG3852 3946769 3947818 + [T] Signal transduction histidine kinase, nitrogen specific glnG CDS COG2204 3947826 3949235 + [T] Response regulator containing CheY-like receiver, AAA-type 2052 hemN CDS COG0635 3949299 3950672 - [H] Coproporphyrinogen III oxidase and related Fe-S 2053 yihI CDS COG3078 3950928 3951452 - [S] Uncharacterized protein conserved in bacteria 2054 yihA CDS COG0218 3952014 3952643 + [R] Predicted GTPase 2055 polA CDS COG0749 3953132 3955921 - [L] DNA polymerase I - 3'-5' exonuclease 2056 dsbA CDS COG1651 3956331 3956960 - [O] Protein-disulfide isomerase cds-WP_012666413.1 CDS COG2334 3957010 3958002 - [R] Putative homoserine kinase type II (protein cds-CPI84_RS19015 CDS COG3084 3958081 3958333 - [S] Uncharacterized protein conserved in bacteria 2057 mobA CDS COG0746 3958382 3958945 + [H] Molybdopterin-guanine dinucleotide biosynthesis protein A 2058 rrf_8 rRNA NA 3959034 3959149 - NA rna-CPI84_RS19030 rRNA NA 3959385 3962378 - NA rna-CPI84_RS19035 tRNA NA 3962604 3962679 - NA rna-CPI84_RS19040 rRNA NA 3962751 3964290 - NA 2059 cds-WP_104945178.1 CDS COG2814 3964853 3966250 + [G] Arabinose efflux permease 2060 rbsR CDS COG1609 3966247 3967248 - [K] Transcriptional regulators rbsK CDS COG0524 3967251 3968180 - [G] Sugar kinases, ribokinase family rbsB CDS COG1879 3968242 3969123 - [G] ABC-type sugar transport system, periplasmic component rbsC CDS COG1172 3969273 3970241 - [G] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components rbsA CDS COG1129 3970244 3971749 - [G] ABC-type sugar transport system, ATPase component rbsD CDS COG1869 3971757 3972176 - [G] ABC-type ribose transport system, auxiliary component 2061 alsS CDS COG0028 3972395 3974074 - [EH] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate budA CDS COG3527 3974094 3974876 - [Q] Alpha-acetolactate decarboxylase 2062 cds-WP_012666402.1 CDS COG0583 3974981 3975862 + [K] Transcriptional regulator 2063 cds-WP_012666401.1 CDS COG3111 3975869 3976267 - [S] Uncharacterized conserved protein 2064 cds-WP_012666400.1 CDS NA 3976563 3982508 + NA 2065 cds-WP_012666399.1 CDS NA 3982671 3988943 + NA 2066 kup_2 CDS COG3158 3989047 3990915 - [P] K+ transporter 2067 ravA CDS COG1067 3991173 3992666 + [O] Predicted ATP-dependent protease viaA CDS COG2425 3992663 3994123 + [R] Uncharacterized protein containing a von Willebrand 2068 ovoA CDS COG1262 3994187 3996346 + [S] Uncharacterized conserved protein 2069 asnC CDS COG1522 3996464 3996925 + [K] Transcriptional regulators 2070 mioC CDS COG0716 3997118 3997558 + [C] Flavodoxins 2071 mnmG CDS COG0445 3998024 3999913 + [D] NAD/FAD-utilizing enzyme apparently involved in cell rsmG CDS COG0357 3999910 4000536 + [M] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial 2072 atpI CDS COG3312 4001268 4001648 + [C] F0F1-type ATP synthase, subunit I atpB CDS COG0356 4001657 4002475 + [C] F0F1-type ATP synthase, subunit a atpE CDS COG0636 4002526 4002768 + [C] F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, atpF CDS COG0711 4002872 4003342 + [C] F0F1-type ATP synthase, subunit b atpH CDS COG0712 4003357 4003890 + [C] F0F1-type ATP synthase, delta subunit (mitochondrial atpA CDS COG0056 4003905 4005446 + [C] F0F1-type ATP synthase, alpha subunit atpG CDS COG0224 4005501 4006370 + [C] F0F1-type ATP synthase, gamma subunit atpD CDS COG0055 4006518 4007900 + [C] F0F1-type ATP synthase, beta subunit atpC CDS COG0355 4008047 4008466 + [C] F0F1-type ATP synthase, epsilon subunit (mitochondrial glmU CDS COG1207 4008700 4010070 + [M] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch glmS CDS COG0449 4010229 4012058 + [M] Glucosamine 6-phosphate synthetase, contains amidotransferase and 2073 cds-WP_014539978.1 CDS NA 4012513 4012830 - NA 2074 cds-WP_071819512.1 CDS ROG4411 4013273 4013467 + NA 2075 pstS CDS COG0226 4013891 4014931 + [P] ABC-type phosphate transport system, periplasmic component pstC CDS COG0573 4015027 4015989 + [P] ABC-type phosphate transport system, permease component pstA_2 CDS COG0581 4015986 4016873 + [P] ABC-type phosphate transport system, permease component pstB_2 CDS COG1117 4016917 4017687 + [P] ABC-type phosphate transport system, ATPase component phoU CDS COG0704 4017705 4018433 + [P] Phosphate uptake regulator 2076 cds-WP_014539970.1 CDS NA 4018540 4018674 + NA cds-WP_014539969.1 CDS COG2814 4018721 4018969 + [G] Arabinose efflux permease 2077 cds-WP_015899206.1 CDS COG3677 4019560 4019838 + [L] Transposase and inactivated derivatives 2078 cds-WP_014539968.1 CDS COG2252 4020145 4021458 + [R] Permeases 2079 cds-WP_015899205.1 CDS COG2091 4021495 4022238 - [H] Phosphopantetheinyl transferase 2080 mnmE CDS COG0486 4022394 4023758 - [R] Predicted GTPase yidC CDS COG0706 4023862 4025508 - [U] Preprotein translocase subunit YidC yidD CDS COG0759 4025527 4025769 - [S] Uncharacterized conserved protein rnpA CDS COG0594 4025733 4026092 - [J] RNase P protein component rpmH CDS ROG3844 4026110 4026250 - NA 2081 dnaA CDS NA 4026881 4028272 + NA