Your results are being filtered to match entrez query: txid2759 [ORGN].

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Format for	PSI-BLAST with inclusion threshold: [?] Format for PSI-BLAST: The Position-Specific Iterated BLAST (PSI-BLAST) program performs iterative searches with a protein query, in which sequences found in one round of search are used to build a custom score model for the next round. more... Inclusion Threshold: This sets the statistical significance threshold for including a sequence in the model used by PSI-BLAST to create the PSSM on the next iteration.

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Alignment Text XML ASN.1 Hit Table(text) Hit Table(csv)	Search Strategies ASN.1	PssmWithParameters ASN.1	[?]

The Download link provides BLAST output that may be used as input to another program. This includes parseable formats such as the tabular report or XML as well as the Search Strategy files read by the BLAST+ applications. More details on the parseable (XML, tabular, and ASN.1) reports can be found at http://www.ncbi.nlm.nih.gov/books/NBK21097/

The following formats are offered under the Alignment section:
1). "Text". Non-HTML standard BLAST report.
2). "XML". XML report based upon the DTD at http://www.ncbi.nlm.nih.gov/data_specs/dtd/NCBI_BlastOutput.dtd
3). "ASN.1" Alignment. This is the alignment written out in Abstract Syntax Notation 1.
4). "Hit Table(text)". The tabular report as text.
5). "Hit Table(csv)". The tabular report ready for import into spread-sheet programs like Excel.

The following report is offered under the Search Strategy section:
1). "ASN.1" Search Strategy. A record of the parameters, query, and database used in the search. This file can be used to start a stand-alone BLAST search, see http://www.ncbi.nlm.nih.gov/books/NBK1763/#CmdLineAppsManual.I455_BLAST_search_stra

PSI blast Iteration 3

ref|XP_006521491.1| (164 letters)

RID: REW506BE014 (Expires on 05-18 22:22 pm)

Query ID: gi|568993400|ref|XP_006521491.1|; gi|568993400|ref|XP_006521491.1|
Description: PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X1 [Mus musculus]
Molecule type: amino acid
Query Length: 164


Database Name: refseq_protein
Description: NCBI Protein Reference Sequences See details
Program: BLASTP 2.2.29+ Citation

Reference

Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.

Reference - composition-based statistics starting in round 2

Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.

No new sequences were found above the 0.005 threshold

Other reports: Search Summary [Distance tree of results] [Multiple alignment]

Search Parameters
Search parameter name	Search parameter value
Program	blastp
Word size	3
Expect value	10
Hitlist size	500
Gapcosts	11,1
Matrix	BLOSUM62
Filter string	F
Genetic Code	1
Window Size	40
Threshold	11
Composition-based stats	1

Database
Database parameter name	Database parameter value
Posted date	May 14, 2014 4:14 AM
Number of letters	10,494,864,558
Number of sequences	29,201,087
Entrez query	none

Karlin-Altschul statistics
Params	Ungapped	Gapped
Lambda	0.313986	0.267
K	0.128777	0.0357133
H	0.389274	0.14
Alpha	0.7916	1.9
Alpha_v	4.96466	42.6028
Sigma		43.6362

Descriptions

Run PSI-Blast iteration 4 with max

, Reading indexes 1-5, displaying indexes 1-5

Sequences producing significant alignments with E-value BETTER than threshold

Select:All None Selected:0 Yellow: sequences scoring below threshold on previous iteration

Sequences producing significant alignments with E-value BETTER than threshold
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1Select seq ref\|XP_006521491.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X1 [Mus musculus]	158	158	100%	7e-46	100%	XP_006521491.1(scored below threshold on previous iteration)
2Select seq ref\|NP_082351.1\|	tumor necrosis factor receptor superfamily member 13C [Mus musculus]	153	153	100%	9e-44	93%	NP_082351.1(scored below threshold on previous iteration)
3Select seq ref\|XP_576316.2\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C-like [Rattus norvegicus] >ref\|XP_001077542.1\| PREDICTED: tumor necrosis factor receptor superfamily member 13C-like [Rattus norvegicus]	150	150	88%	2e-42	80%	XP_576316.2(scored below threshold on previous iteration)
4Select seq ref\|XP_005067089.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Mesocricetus auratus]	146	146	100%	5e-41	56%	XP_005067089.1(scored below threshold on previous iteration)
5Select seq ref\|XP_003512388.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Cricetulus griseus] >ref\|XP_007618644.1\| PREDICTED: tumor necrosis factor receptor superfamily member 13C [Cricetulus griseus]	146	146	100%	7e-41	54%	XP_003512388.1(scored below threshold on previous iteration)
6Select seq ref\|XP_006980269.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Peromyscus maniculatus bairdii]	128	128	91%	3e-34	56%	XP_006980269.1(scored below threshold on previous iteration)
7Select seq ref\|XP_004897796.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Heterocephalus glaber]	128	128	100%	7e-34	48%	XP_004897796.1(scored below threshold on previous iteration)
8Select seq ref\|XP_005354557.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Microtus ochrogaster]	125	125	100%	6e-33	53%	XP_005354557.1(scored below threshold on previous iteration)
9Select seq ref\|XP_004642638.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Octodon degus]	124	124	98%	1e-32	41%	XP_004642638.1(scored below threshold on previous iteration)
10Select seq ref\|XP_004845557.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Heterocephalus glaber]	122	122	96%	8e-32	48%	XP_004845557.1(scored below threshold on previous iteration)
11Select seq ref\|XP_006934224.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Felis catus]	121	121	100%	1e-31	40%	XP_006934224.1(scored below threshold on previous iteration)
12Select seq ref\|XP_003470572.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Cavia porcellus]	121	121	96%	2e-31	44%	XP_003470572.1(scored below threshold on previous iteration)
13Select seq ref\|XP_004437976.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Ceratotherium simum simum]	115	115	98%	6e-29	46%	XP_004437976.1(scored below threshold on previous iteration)
14Select seq ref\|XP_005515007.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Columba livia]	112	112	97%	1e-27	24%	XP_005515007.1(scored below threshold on previous iteration)
15Select seq ref\|XP_004650677.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Jaculus jaculus]	109	109	95%	6e-27	42%	XP_004650677.1(scored below threshold on previous iteration)
16Select seq ref\|XP_003783197.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Otolemur garnettii]	109	109	98%	7e-27	44%	XP_003783197.1(scored below threshold on previous iteration)
17Select seq ref\|XP_002831258.2\|	PREDICTED: uncharacterized protein LOC100456696 [Pongo abelii]	113	113	88%	8e-27	48%	XP_002831258.2(scored below threshold on previous iteration)
18Select seq ref\|XP_004380101.1\|	PREDICTED: uncharacterized protein LOC101359471 [Trichechus manatus latirostris]	111	111	97%	3e-26	43%	XP_004380101.1(scored below threshold on previous iteration)
19Select seq ref\|NP_001180121.1\|	tumor necrosis factor receptor superfamily member 13C [Bos taurus]	108	108	97%	4e-26	43%	NP_001180121.1(scored below threshold on previous iteration)
20Select seq ref\|XP_006150780.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Tupaia chinensis]	107	107	91%	5e-26	38%	XP_006150780.1(scored below threshold on previous iteration)
21Select seq ref\|XP_006866978.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Chrysochloris asiatica]	106	106	96%	7e-26	41%	XP_006866978.1(scored below threshold on previous iteration)
22Select seq ref\|XP_005237495.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Falco peregrinus] >ref\|XP_005441399.1\| PREDICTED: tumor necrosis factor receptor superfamily member 13C [Falco cherrug]	107	107	82%	9e-26	28%	XP_005237495.1(scored below threshold on previous iteration)
23Select seq ref\|XP_005379434.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X2 [Chinchilla lanigera]	107	107	96%	1e-25	43%	XP_005379434.1(scored below threshold on previous iteration)
24Select seq ref\|XP_005606750.1\|	PREDICTED: LOW QUALITY PROTEIN: tumor necrosis factor receptor superfamily member 13C [Equus caballus]	106	106	98%	1e-25	37%	XP_005606750.1(scored below threshold on previous iteration)
25Select seq ref\|XP_002721429.1\|	PREDICTED: BAFF receptor-like [Oryctolagus cuniculus]	106	106	90%	1e-25	49%	XP_002721429.1(scored below threshold on previous iteration)
26Select seq ref\|XP_005379433.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X1 [Chinchilla lanigera]	107	107	96%	2e-25	43%	XP_005379433.1(scored below threshold on previous iteration)
27Select seq ref\|XP_004813971.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Mustela putorius furo]	104	104	100%	7e-25	39%	XP_004813971.1(scored below threshold on previous iteration)
28Select seq ref\|XP_002763949.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Callithrix jacchus]	103	103	98%	1e-24	48%	XP_002763949.1(scored below threshold on previous iteration)
29Select seq ref\|XP_007079578.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Panthera tigris altaica]	102	102	100%	2e-24	38%	XP_007079578.1(scored below threshold on previous iteration)
30Select seq ref\|XP_005488807.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Zonotrichia albicollis]	103	103	97%	3e-24	23%	XP_005488807.1(scored below threshold on previous iteration)
31Select seq ref\|NP_001232906.1\|	tumor necrosis factor receptor superfamily member 13C [Equus caballus]	102	102	98%	4e-24	49%	NP_001232906.1(scored below threshold on previous iteration)
32Select seq ref\|XP_004397517.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Odobenus rosmarus divergens]	102	102	100%	4e-24	45%	XP_004397517.1(scored below threshold on previous iteration)
33Select seq ref\|XP_005907254.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Bos mutus]	100	100	97%	6e-24	39%	XP_005907254.1(scored below threshold on previous iteration)
34Select seq ref\|XP_005567183.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X1 [Macaca fascicularis]	101	101	98%	7e-24	37%	XP_005567183.1(scored below threshold on previous iteration)
35Select seq ref\|XP_006069000.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Bubalus bubalis]	100	100	97%	1e-23	38%	XP_006069000.1(scored below threshold on previous iteration)
36Select seq ref\|XP_003419857.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C-like [Loxodonta africana]	101	101	96%	1e-23	40%	XP_003419857.1(scored below threshold on previous iteration)
37Select seq ref\|XP_005040004.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Ficedula albicollis]	101	101	96%	2e-23	23%	XP_005040004.1(scored below threshold on previous iteration)
38Select seq ref\|XP_004589522.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Ochotona princeps]	99.6	99.6	98%	5e-23	45%	XP_004589522.1(scored below threshold on previous iteration)
39Select seq ref\|XP_006890241.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Elephantulus edwardii]	98.8	98.8	93%	8e-23	41%	XP_006890241.1(scored below threshold on previous iteration)
40Select seq ref\|XP_004315226.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Tursiops truncatus]	98.8	98.8	91%	9e-23	40%	XP_004315226.1(scored below threshold on previous iteration)
41Select seq ref\|NP_443177.1\|	tumor necrosis factor receptor superfamily member 13C [Homo sapiens]	98.4	98.4	98%	1e-22	48%	NP_443177.1(scored below threshold on previous iteration)
42Select seq ref\|XP_002192624.2\|	PREDICTED: uncharacterized protein LOC100226292 [Taeniopygia guttata]	98.8	98.8	97%	2e-22	25%	XP_002192624.2(scored below threshold on previous iteration)
43Select seq ref\|XP_004063616.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Gorilla gorilla gorilla]	98.4	98.4	98%	2e-22	41%	XP_004063616.1(scored below threshold on previous iteration)
44Select seq ref\|XP_006917430.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Pteropus alecto]	97.6	97.6	98%	2e-22	39%	XP_006917430.1(scored below threshold on previous iteration)
45Select seq ref\|XP_001101623.2\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C-like [Macaca mulatta] >ref\|XP_005567184.1\| PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X2 [Macaca fascicularis]	97.6	97.6	98%	3e-22	39%	XP_001101623.2(scored below threshold on previous iteration)
46Select seq ref\|XP_006207250.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Vicugna pacos]	95.7	95.7	90%	6e-22	36%	XP_006207250.1(scored below threshold on previous iteration)
47Select seq ref\|XP_007523491.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Erinaceus europaeus]	95.3	95.3	91%	2e-21	43%	XP_007523491.1(scored below threshold on previous iteration)
48Select seq ref\|XP_007189364.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Balaenoptera acutorostrata scammoni]	94.2	94.2	90%	3e-21	44%	XP_007189364.1(scored below threshold on previous iteration)
49Select seq ref\|XP_006259961.1\|	PREDICTED: uncharacterized protein LOC102561983 [Alligator mississippiensis]	94.9	94.9	89%	5e-21	25%	XP_006259961.1(scored below threshold on previous iteration)
50Select seq ref\|NP_001032917.1\|	tumor necrosis factor receptor superfamily, member 13C [Gallus gallus]	94.6	94.6	95%	7e-21	22%	NP_001032917.1(scored below threshold on previous iteration)
51Select seq ref\|XP_006027737.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Alligator sinensis]	94.6	94.6	89%	7e-21	25%	XP_006027737.1(scored below threshold on previous iteration)
52Select seq ref\|XP_007454156.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Lipotes vexillifer]	93.8	93.8	90%	1e-20	41%	XP_007454156.1(scored below threshold on previous iteration)
53Select seq ref\|XP_003221050.1\|	PREDICTED: hypothetical protein LOC100552660 [Anolis carolinensis]	94.2	94.2	92%	1e-20	21%	XP_003221050.1(scored below threshold on previous iteration)
54Select seq ref\|XP_003202364.1\|	PREDICTED: hypothetical protein LOC100547247 [Meleagris gallopavo]	92.6	92.6	95%	3e-20	21%	XP_003202364.1(scored below threshold on previous iteration)
55Select seq ref\|XP_004676483.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Condylura cristata]	91.9	91.9	96%	4e-20	45%	XP_004676483.1(scored below threshold on previous iteration)
56Select seq ref\|XP_003264675.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Nomascus leucogenys]	92.2	92.2	98%	5e-20	34%	XP_003264675.1(scored below threshold on previous iteration)
57Select seq ref\|XP_007099994.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Physeter catodon]	91.5	91.5	90%	9e-20	37%	XP_007099994.1(scored below threshold on previous iteration)
58Select seq ref\|XP_004279694.1\|	PREDICTED: uncharacterized protein LOC101276202 [Orcinus orca]	93.0	93.0	90%	1e-19	40%	XP_004279694.1(scored below threshold on previous iteration)
59Select seq ref\|XP_849061.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform 2 [Canis lupus familiaris]	90.7	90.7	89%	1e-19	44%	XP_849061.1(scored below threshold on previous iteration)
60Select seq ref\|XP_005527798.1\|	PREDICTED: uncharacterized protein LOC102103626 [Pseudopodoces humilis]	91.1	91.1	97%	1e-19	23%	XP_005527798.1(scored below threshold on previous iteration)
61Select seq ref\|XP_004771280.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X3 [Mustela putorius furo]	88.4	88.4	100%	9e-19	43%	XP_004771280.1(scored below threshold on previous iteration)
62Select seq ref\|XP_004771279.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X2 [Mustela putorius furo]	87.2	87.2	100%	2e-18	43%	XP_004771279.1(scored below threshold on previous iteration)
63Select seq ref\|XP_004771278.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X1 [Mustela putorius furo]	86.5	86.5	100%	4e-18	43%	XP_004771278.1(scored below threshold on previous iteration)
64Select seq ref\|XP_005422009.1\|	PREDICTED: protein shisa-6 homolog [Geospiza fortis]	84.2	84.2	89%	2e-16	22%	XP_005422009.1(scored below threshold on previous iteration)
65Select seq ref\|XP_005322468.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Ictidomys tridecemlineatus]	78.8	78.8	98%	2e-15	41%	XP_005322468.1(scored below threshold on previous iteration)
66Select seq ref\|XP_001154286.1\|	PREDICTED: uncharacterized protein LOC746611 [Pan troglodytes]	80.3	80.3	76%	3e-15	45%	XP_001154286.1(scored below threshold on previous iteration)
67Select seq ref\|XP_003814704.1\|	PREDICTED: uncharacterized protein LOC100968929 [Pan paniscus]	79.5	79.5	39%	1e-14	55%	XP_003814704.1(scored below threshold on previous iteration)
68Select seq ref\|XP_006740425.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Leptonychotes weddellii]	74.5	74.5	39%	1e-14	48%	XP_006740425.1(scored below threshold on previous iteration)
69Select seq ref\|XP_006120590.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Pelodiscus sinensis]	76.8	76.8	85%	1e-14	26%	XP_006120590.1(scored below threshold on previous iteration)
70Select seq ref\|XP_005681248.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Capra hircus]	75.7	75.7	74%	3e-14	34%	XP_005681248.1(scored below threshold on previous iteration)
71Select seq ref\|XP_006174789.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Camelus ferus]	71.1	71.1	47%	5e-13	47%	XP_006174789.1(scored below threshold on previous iteration)
72Select seq ref\|XP_002926730.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C-like [Ailuropoda melanoleuca]	69.5	69.5	100%	2e-12	35%	XP_002926730.1(scored below threshold on previous iteration)
73Select seq ref\|XP_005984806.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Pantholops hodgsonii]	66.8	66.8	46%	1e-11	47%	XP_005984806.1(scored below threshold on previous iteration)
74Select seq ref\|XP_002688013.2\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Bos taurus]	66.4	66.4	73%	3e-11	41%	XP_002688013.2(scored below threshold on previous iteration)
75Select seq ref\|XP_003933016.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Saimiri boliviensis boliviensis]	64.9	64.9	62%	8e-11	47%	XP_003933016.1(scored below threshold on previous iteration)
76Select seq ref\|XP_004023694.1\|	PREDICTED: LOW QUALITY PROTEIN: tumor necrosis factor receptor superfamily member 13C-like [Ovis aries]	66.0	66.0	83%	9e-11	34%	XP_004023694.1(scored below threshold on previous iteration)
77Select seq ref\|XP_003905674.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C-like [Papio anubis]	59.5	59.5	39%	1e-08	55%	XP_003905674.1(scored below threshold on previous iteration)
78Select seq ref\|XP_004700749.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Echinops telfairi]	57.2	112	88%	3e-08	40%	XP_004700749.1(scored below threshold on previous iteration)
79Select seq ref\|XP_003905673.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C-like [Papio anubis]	53.7	53.7	45%	3e-07	36%	XP_003905673.1(scored below threshold on previous iteration)
80Select seq ref\|XP_004484190.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Dasypus novemcinctus]	51.8	103	68%	3e-06	79%	XP_004484190.1(scored below threshold on previous iteration)

Sequences with E-value WORSE than threshold

Select:All None Selected:0 Yellow: sequences scoring below threshold on previous iteration

Sequences with E-value WORSE than threshold
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession	Select for PSI blast	Used to build PSSM

Run PSI-Blast iteration 4 with max

Alignments

Download GenPept Graphics Next Previous Descriptions

PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X1 [Mus musculus]

Sequence ID: ref|XP_006521491.1|Length: 164Number of Matches: 1

See 2 more title(s)

Related Information

Gene-associated gene details

Identical Proteins-Proteins identical to the subject

Range 1: 1 to 164GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
158 bits(399)	7e-46()	Composition-based stats.	164/164(100%)	164/164(100%)	0/164(0%)

Query  1    MGARRLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDTGHTSSLEPGTALQP  60
            MGARRLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDTGHTSSLEPGTALQP
Sbjct  1    MGARRLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDTGHTSSLEPGTALQP  60

Query  61   QEGSALRPDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQQETPH  120
            QEGSALRPDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQQETPH
Sbjct  61   QEGSALRPDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQQETPH  120

Query  121  ASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164
            ASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ
Sbjct  121  ASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164

Download GenPept Graphics Next Previous Descriptions

tumor necrosis factor receptor superfamily member 13C [Mus musculus]

Sequence ID: ref|NP_082351.1|Length: 175Number of Matches: 1

Related Information

Gene-associated gene details

UniGene-clustered expressed sequence tags

Map Viewer-aligned genomic context

Range 1: 1 to 175GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
153 bits(386)	9e-44()	Composition-based stats.	163/175(93%)	163/175(93%)	11/175(6%)

Query  1    MGARRLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDTGHTSSLEPGTALQP  60
            MGARRLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDTGHTSSLEPGTALQP
Sbjct  1    MGARRLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDTGHTSSLEPGTALQP  60

Query  61   QEGSALRPDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQ-----  115
            QEGSALRPDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQ     
Sbjct  61   QEGSALRPDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQQESLE  120

Query  116  ------QETPHASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164
                   ETPHASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ
Sbjct  121  NVFVPSSETPHASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  175

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PREDICTED: tumor necrosis factor receptor superfamily member 13C-like [Rattus norvegicus]

Sequence ID: ref|XP_576316.2|Length: 175Number of Matches: 1

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Related Information

Gene-associated gene details

Map Viewer-aligned genomic context

Identical Proteins-Proteins identical to the subject

Range 1: 20 to 175GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
150 bits(377)	2e-42()	Composition-based stats.	125/156(80%)	130/156(83%)	11/156(7%)

Query  20   TQCNQTECFDPLVRNCVSCELFHTPDTGHTSSLEPGTALQPQEGSALRPDVALLVGAPAL  79
            TQCNQTECFDPLVRNCVSCELF+TP+T H SSLEPGTALQPQEGS LRPDVALL GAPAL
Sbjct  20   TQCNQTECFDPLVRNCVSCELFYTPETRHASSLEPGTALQPQEGSGLRPDVALLFGAPAL  79

Query  80   LGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGV-----------QQETPHASAPTWPP  128
            LGL+LALTLVGLVSLV WRWRQQ RTAS DTSEGV             ET HASAP WPP
Sbjct  80   LGLVLALTLVGLVSLVGWRWRQQRRTASLDTSEGVQQESLENVFVPPSETLHASAPNWPP  139

Query  129  LKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164
             KEDAD+ L  HS+PVPATELGSTELVTTKTAGPEQ
Sbjct  140  FKEDADNILSCHSIPVPATELGSTELVTTKTAGPEQ  175

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PREDICTED: tumor necrosis factor receptor superfamily member 13C [Mesocricetus auratus]

Sequence ID: ref|XP_005067089.1|Length: 179Number of Matches: 1

Related Information

Gene-associated gene details

Map Viewer-aligned genomic context

Range 1: 1 to 179GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
146 bits(368)	5e-41()	Composition-based stats.	100/179(56%)	117/179(65%)	15/179(8%)

Query  1    MGARRLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDTGHTSSLEPGTALQP  60
            MGAR+   RS+RSRDS +PT C QT CFDPLVR+CV+C L  TPD  H SS  PGTALQP
Sbjct  1    MGARKREARSRRSRDSPMPTPCVQTLCFDPLVRHCVACNLLRTPDPLHASSQAPGTALQP  60

Query  61   QEGSALRPDVALLVGAPALLGL----ILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQQ  116
            QE           +  P LL      +  +  + LV+LV+WRWRQQ R ASP T +GVQ+
Sbjct  61   QESVGTGAGPDARLPLPGLLFGAPALLGLMLALALVALVTWRWRQQRRMASPGTPDGVQE  120

Query  117  ETPH-----------ASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164
            E+             ASAP WP  KEDAD+ LP HS+PVPATELGSTELVTTKTAGPE+
Sbjct  121  ESLDNVFVSSSETLHASAPIWPTPKEDADTTLPGHSIPVPATELGSTELVTTKTAGPEE  179

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PREDICTED: tumor necrosis factor receptor superfamily member 13C [Cricetulus griseus]

Sequence ID: ref|XP_003512388.1|Length: 179Number of Matches: 1

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Related Information

Gene-associated gene details

Map Viewer-aligned genomic context

Identical Proteins-Proteins identical to the subject

Range 1: 1 to 179GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
146 bits(367)	7e-41()	Composition-based stats.	97/179(54%)	115/179(64%)	15/179(8%)

Query  1    MGARRLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDTGHTSSLEPGTALQP  60
            MGAR+   +S+RSRDS + T C QT CFDPLVR+CV+C L  TPD  H SS  PGTALQP
Sbjct  1    MGARKREAKSRRSRDSPMTTPCVQTLCFDPLVRHCVACNLLRTPDPLHASSHAPGTALQP  60

Query  61   QEGSALRPDVALLVGAPALLGL----ILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQQ  116
            QE     P     +  P LL      +  +  + LV+LV+WRW QQ R ASP T +GVQ+
Sbjct  61   QESVGTGPGPDTTLPLPGLLFGAPALLGLMLALALVALVTWRWWQQRRMASPGTPDGVQE  120

Query  117  ETPH-----------ASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164
            E+             ASAP WP  KED D+ LP HS+PVPATELGSTELVTTKTAGPE+
Sbjct  121  ESLDNVFVSSSETLHASAPIWPTPKEDVDTTLPGHSIPVPATELGSTELVTTKTAGPEE  179

Basic Local Alignment Search Tool

ref|XP_006521491.1| (164 letters)

Graphic Summary

Distribution of 82 Blast Hits on the Query Sequence [?]

Descriptions

Sequences producing significant alignments with E-value BETTER than threshold

Sequences with E-value WORSE than threshold

Alignments

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