RID: 0EBTBMZ5014 Job Title:Endonuclease MutS2 Program: BLASTP Query: tr|A0A1L4CZS0|A0A1L4CZS0_9BACT Endonuclease MutS2 OS=Silvanigrella aquatica OX=1915309 GN=mutS2 PE=3 SV=1 ID: lcl|Query_10864904(amino acid) Length: 951 Database: swissprot Non-redundant UniProtKB/SwissProt sequences Sequences producing significant alignments: Scientific Common Max Total Query E Per. Acc. Description Name Name Taxid Score Score cover Value Ident Len Accession RecName: Full=Endonuclease MutS2; AltName:... Clostridium ... NA 290402 287 351 80% 6e-83 32.79 786 A6LS00.1 RecName: Full=Endonuclease MutS2; AltName:... Thermomicrob... NA 309801 281 335 76% 1e-80 34.01 792 B9KYW4.1 RecName: Full=Endonuclease MutS2; AltName:... Clostridium ... NA 935198 280 323 83% 3e-80 32.60 785 B2TS45.1 RecName: Full=Endonuclease MutS2; AltName:... Geobacillus ... NA 471223 280 338 90% 4e-80 30.00 784 C5D5Q8.1 RecName: Full=Endonuclease MutS2; AltName:... Clostridium ... NA 508767 279 322 83% 5e-80 32.60 785 B2V583.1 RecName: Full=Endonuclease MutS2; AltName:... Lactiplantib... NA 220668 278 278 60% 1e-79 31.78 787 Q88V16.1 RecName: Full=Endonuclease MutS2; AltName:... Staphylococc... NA 176280 277 334 87% 3e-79 29.53 782 Q8CPL6.1 RecName: Full=Endonuclease MutS2; AltName:... Staphylococc... NA 279808 277 277 67% 3e-79 28.64 783 Q4L5E9.1 RecName: Full=Endonuclease MutS2; AltName:... Staphylococc... NA 176279 277 335 89% 3e-79 29.36 782 Q5HQ30.1 RecName: Full=Endonuclease MutS2; AltName:... Levilactobac... NA 387344 276 320 76% 6e-79 31.62 787 Q03R49.1 RecName: Full=Endonuclease MutS2; AltName:... Staphylococc... NA 396513 274 274 60% 4e-78 30.31 782 B9DPU2.1 RecName: Full=Endonuclease MutS2; AltName:... Clostridioid... NA 272563 272 272 60% 2e-77 31.18 792 Q189Q3.1 RecName: Full=Endonuclease MutS2; AltName:... Latilactobac... NA 314315 271 271 67% 7e-77 28.33 787 Q38YN3.1 RecName: Full=Endonuclease MutS2; AltName:... Geobacillus ... NA 420246 270 324 82% 1e-76 29.98 784 A4IRL1.1 RecName: Full=Endonuclease MutS2; AltName:... Pelotomaculu... NA 370438 270 337 80% 1e-76 32.02 785 A5D0W6.1 RecName: Full=Endonuclease MutS2; AltName:... Staphylococc... NA 426430 268 323 84% 4e-76 28.70 782 A6QG46.1 RecName: Full=Endonuclease MutS2; AltName:... Thermotoga m... NA 243274 268 313 69% 4e-76 29.36 757 Q9X105.1 RecName: Full=Endonuclease MutS2; AltName:... Shouchella c... NA 66692 268 268 64% 5e-76 30.91 787 Q5WEK0.1 RecName: Full=Endonuclease MutS2; AltName:... Staphylococc... NA 359786 268 323 84% 5e-76 28.70 782 A5IS30.1 RecName: Full=Endonuclease MutS2; AltName:... Staphylococc... NA 273036 268 323 84% 5e-76 28.70 782 Q2YXD1.1 RecName: Full=Endonuclease MutS2; AltName:... Staphylococc... NA 282458 268 323 84% 6e-76 28.70 782 Q6GHU1.1 RecName: Full=Endonuclease MutS2; AltName:... Staphylococc... NA 342451 268 325 82% 7e-76 27.97 782 Q49WR1.1 RecName: Full=Endonuclease MutS2; AltName:... Agathobacter... NA 515619 268 268 68% 8e-76 29.75 792 C4ZI07.1 RecName: Full=Endonuclease MutS2; AltName:... Staphylococc... NA 282459 268 323 84% 8e-76 28.55 782 Q6GA70.1 RecName: Full=Endonuclease MutS2; AltName:... Thermotoga p... NA 390874 267 312 69% 9e-76 29.36 757 A5IMS8.1 RecName: Full=Endonuclease MutS2; AltName:... Staphylococc... NA 418127 267 322 84% 1e-75 28.55 782 A7X169.1 RecName: Full=Endonuclease MutS2; AltName:... Thermotoga s... NA 126740 266 311 69% 1e-75 29.36 757 B1LC69.1 RecName: Full=Endonuclease MutS2; AltName:... Caldicellulo... NA 351627 266 330 79% 2e-75 30.27 787 A4XK62.1 RecName: Full=Endonuclease MutS2; AltName:... Caldicellulo... NA 521460 266 340 79% 3e-75 30.20 787 B9MK78.1 RecName: Full=Endonuclease MutS2; AltName:... Finegoldia m... NA 334413 265 265 57% 5e-75 31.57 783 B0S1P2.1 RecName: Full=Endonuclease MutS2; AltName:... Staphylococc... NA 1280 264 319 76% 6e-75 29.84 719 Q9ZEH5.1 RecName: Full=Endonuclease MutS2; AltName:... Geobacillus ... NA 235909 264 323 74% 2e-74 32.16 784 Q5KWF8.1 RecName: Full=Endonuclease MutS2; AltName:... Symbiobacter... NA 292459 262 317 96% 8e-74 31.05 793 Q67QE3.1 RecName: Full=Endonuclease MutS2; AltName:... Pediococcus ... NA 278197 262 262 63% 8e-74 30.71 785 Q03ES2.1 RecName: Full=Endonuclease MutS2; AltName:... Clostridium ... NA 289380 262 314 79% 8e-74 29.83 786 Q0SRU6.1 RecName: Full=Endonuclease MutS2; AltName:... Clostridium ... NA 195102 262 314 79% 9e-74 29.83 786 Q8XJ80.1 RecName: Full=Endonuclease MutS2; AltName:... Clostridium ... NA 195103 262 314 79% 1e-73 29.66 786 Q0TP77.1 RecName: Full=Endonuclease MutS2; AltName:... Leuconostoc ... NA 203120 261 304 85% 2e-73 29.24 800 Q03VG8.1 RecName: Full=Endonuclease MutS2; AltName:... Ligilactobac... NA 362948 261 261 60% 3e-73 30.82 786 Q1WT38.1 RecName: Full=Endonuclease MutS2; AltName:... Bacillus vel... NA 326423 259 311 78% 9e-73 30.00 785 A7Z7E7.1 RecName: Full=Endonuclease MutS2; AltName:... Bacillus cer... NA 405532 258 308 69% 1e-72 32.97 786 B7HF67.1 RecName: Full=Endonuclease MutS2; AltName:... Bacillus cer... NA 405534 258 308 69% 2e-72 32.97 786 B7HRJ3.1 RecName: Full=Endonuclease MutS2; AltName:... Bacillus cer... NA 222523 258 308 69% 3e-72 32.97 786 Q72ZJ0.1 RecName: Full=Endonuclease MutS2; AltName:... Bacillus myc... NA 315730 258 306 66% 3e-72 32.97 786 A9VJL2.1 RecName: Full=Endonuclease MutS2; AltName:... Bacillus cer... NA 405535 258 307 69% 3e-72 32.97 786 B7JR57.1 RecName: Full=Endonuclease MutS2; AltName:... Bacillus cer... NA 288681 258 307 69% 3e-72 32.97 786 Q633P2.1 RecName: Full=Endonuclease MutS2; AltName:... Bacillus thu... NA 412694 257 307 69% 4e-72 32.97 786 A0RJF2.1 RecName: Full=Endonuclease MutS2; AltName:... Bacillus ant... NA 568206 257 307 69% 5e-72 32.97 786 C3L808.1 RecName: Full=Endonuclease MutS2; AltName:... [Bacillus th... NA 281309 257 307 69% 5e-72 32.97 786 Q6HCX6.1 RecName: Full=Endonuclease MutS2; AltName:... Bacillus cer... NA 405531 257 306 66% 5e-72 32.97 786 B7IJV1.1 RecName: Full=Endonuclease MutS2; AltName:... Thermotoga n... NA 309803 256 256 57% 7e-72 31.42 757 B9K937.1 RecName: Full=Endonuclease MutS2; AltName:... Bacillus cyt... NA 315749 255 311 66% 3e-71 32.97 786 A7GTK1.1 RecName: Full=Endonuclease MutS2; AltName:... Synechocysti... NA 1111708 256 256 58% 3e-71 31.54 822 P73625.1 RecName: Full=Endonuclease MutS2; AltName:... Clostridium ... NA 386415 254 325 91% 4e-71 30.05 785 A0PZP4.1 RecName: Full=Endonuclease MutS2; AltName:... Lacticaseiba... NA 543734 254 254 64% 5e-71 30.24 786 B3WC74.1 RecName: Full=Endonuclease MutS2; AltName:... Lacticaseiba... NA 321967 254 254 64% 7e-71 30.24 786 Q03AZ5.1 RecName: Full=Endonuclease MutS2; AltName:... Halothermoth... NA 373903 253 308 93% 2e-70 29.65 791 B8D298.1 RecName: Full=Endonuclease MutS2; AltName:... Ruminiclostr... NA 394503 253 321 91% 2e-70 29.26 792 B8I1Z8.1 RecName: Full=Endonuclease MutS2; AltName:... Enterococcus... NA 226185 252 304 73% 3e-70 29.96 788 Q835H3.1 RecName: Full=Endonuclease MutS2; AltName:... Carboxydothe... NA 246194 251 295 79% 4e-70 31.79 777 Q3ABU1.1 RecName: Full=Endonuclease MutS2; AltName:... Lachnospira ... NA 515620 251 327 87% 5e-70 29.38 787 C4Z417.1 RecName: Full=Endonuclease MutS2; AltName:... Leuconostoc ... NA 349519 251 251 67% 1e-69 27.91 801 B1MXB4.1 RecName: Full=Endonuclease MutS2; AltName:... Clostridium ... NA 272562 250 334 79% 1e-69 28.57 788 Q97GM6.1 RecName: Full=Endonuclease MutS2; AltName:... Brevibacillu... NA 358681 249 294 88% 3e-69 28.80 785 C0Z9F1.1 RecName: Full=Endonuclease MutS2; AltName:... Oceanobacill... NA 221109 249 249 60% 4e-69 29.38 782 Q8EPI1.1 RecName: Full=Endonuclease MutS2; AltName:... Lachnoclostr... NA 357809 248 324 75% 6e-69 30.81 796 A9KR74.1 RecName: Full=Endonuclease MutS2; AltName:... Alkaliphilus... NA 350688 248 289 88% 7e-69 30.56 790 A8MHU4.1 RecName: Full=Endonuclease MutS2; AltName:... Bacillus lic... NA 279010 247 308 88% 1e-68 30.05 785 Q65GE2.1 RecName: Full=Endonuclease MutS2; AltName:... Clostridium ... NA 431943 247 321 78% 1e-68 30.31 786 A5N245.1 RecName: Full=Endonuclease MutS2; AltName:... Lactobacillu... NA 257314 246 292 84% 3e-68 28.95 788 Q74KU8.1 RecName: Full=Endonuclease MutS2; AltName:... Caldanaeroba... NA 273068 246 335 75% 5e-68 31.19 790 Q8R9D0.1 RecName: Full=Endonuclease MutS2; AltName:... Halalkalibac... NA 272558 245 245 56% 8e-68 29.83 785 Q9K8A0.1 RecName: Full=Putative endonuclease MutS2; AltName:... Bacillus sub... NA 224308 244 296 83% 2e-67 29.64 785 P94545.2 RecName: Full=Endonuclease MutS2; AltName:... Anaeromyxoba... NA 404589 243 311 70% 4e-67 32.21 805 A7HAB8.1 RecName: Full=Endonuclease MutS2; AltName:... Alkaliphilus... NA 293826 239 297 81% 8e-66 27.20 789 A6TNX0.1 RecName: Full=Endonuclease MutS2; AltName:... Listeria mon... NA 552536 238 299 79% 2e-65 31.90 785 B8DI00.1 RecName: Full=Endonuclease MutS2; AltName:... Lactobacillu... NA 324831 238 280 65% 4e-65 29.73 791 Q045P1.1 RecName: Full=Endonuclease MutS2; AltName:... Exiguobacter... NA 262543 238 283 76% 4e-65 28.81 788 B1YJY5.1 RecName: Full=Endonuclease MutS2; AltName:... Clostridium ... NA 441770 237 300 78% 6e-65 28.83 788 A7FY72.1 RecName: Full=Endonuclease MutS2; AltName:... Listeria inn... NA 272626 237 295 79% 6e-65 31.73 785 Q92CH6.1 RecName: Full=Endonuclease MutS2; AltName:... Clostridium ... NA 536232 236 300 78% 8e-65 28.83 788 C1FKL4.1 RecName: Full=Endonuclease MutS2; AltName:... Acetivibrio ... NA 203119 236 312 95% 8e-65 28.25 793 A3DE67.1 RecName: Full=Endonuclease MutS2; AltName:... Listeria mon... NA 169963 236 297 79% 9e-65 31.73 785 Q8Y7P1.1 RecName: Full=Endonuclease MutS2; AltName:... Clostridium ... NA 212717 236 294 84% 1e-64 29.49 786 Q891U1.1 RecName: Full=Endonuclease MutS2; AltName:... Clostridium ... NA 515621 236 300 78% 1e-64 29.01 788 C3KTI4.1 RecName: Full=Endonuclease MutS2; AltName:... Fusobacteriu... NA 190304 235 281 72% 2e-64 30.02 778 Q8RIK8.1 RecName: Full=Endonuclease MutS2; AltName:... Listeria wel... NA 386043 235 296 81% 2e-64 31.63 785 A0AHX3.1 RecName: Full=Endonuclease MutS2; AltName:... Listeria mon... NA 568819 234 295 79% 4e-64 31.56 785 C1L2D7.1 RecName: Full=Endonuclease MutS2; AltName:... Clostridium ... NA 498213 234 298 78% 5e-64 28.65 788 B1IMK5.1 RecName: Full=Endonuclease MutS2; AltName:... Clostridium ... NA 498214 234 301 78% 5e-64 28.83 788 B1L0S3.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 211110 234 234 62% 8e-64 30.49 779 Q8E3J5.1 RecName: Full=Endonuclease MutS2; AltName:... Clostridium ... NA 441772 233 301 78% 2e-63 28.65 788 A7GHZ0.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 205921 232 232 59% 3e-63 31.06 779 Q3JZH6.1 RecName: Full=Endonuclease MutS2; AltName:... Listeria mon... NA 265669 231 291 79% 5e-63 31.22 785 Q720J7.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 299768 231 231 59% 5e-63 31.23 783 Q5LY40.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 264199 231 231 59% 6e-63 31.23 783 Q5M2P5.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 322159 231 231 59% 9e-63 31.23 783 Q03IU4.1 RecName: Full=Endonuclease MutS2; AltName:... Lactococcus ... NA 272623 229 229 65% 2e-62 28.66 776 Q9CF36.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 388919 229 229 60% 2e-62 31.65 777 A3CKV4.1 RecName: Full=Endonuclease MutS2; AltName:... Sulfurihydro... NA 436114 228 291 82% 5e-62 28.21 763 B2V693.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 160491 228 228 59% 6e-62 30.89 779 A2RCQ8.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 186103 228 228 59% 9e-62 30.89 779 Q8NZI5.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 301447 228 228 59% 1e-61 30.68 779 Q99Y73.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 467705 228 228 60% 1e-61 30.52 777 A8AUW9.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 471876 225 225 59% 5e-61 30.72 779 B5XI46.1 RecName: Full=Endonuclease MutS2; AltName:... Lactococcus ... NA 272622 224 224 65% 9e-61 29.10 776 Q02XM1.1 RecName: Full=Endonuclease MutS2; AltName:... Lactococcus ... NA 416870 224 224 65% 2e-60 29.15 776 A2RJC8.1 RecName: Full=Endonuclease MutS2; AltName:... Gemmatimonas... NA 379066 223 269 67% 5e-60 27.46 819 C1A4A9.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 553482 221 221 59% 2e-59 30.59 778 C0MAV6.1 RecName: Full=Endonuclease MutS2; AltName:... Lactobacillu... NA 272621 221 273 65% 2e-59 31.24 785 Q5FLW2.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 391295 220 220 57% 3e-59 29.17 778 A4VSW4.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 553483 220 220 59% 3e-59 30.77 778 C0MEM8.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 210007 220 220 59% 4e-59 29.97 776 Q8DSD1.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 552526 220 220 69% 4e-59 29.59 778 B4U143.1 RecName: Full=Endonuclease MutS2; AltName:... Aquifex aeol... NA 224324 219 266 69% 7e-59 27.05 762 O67287.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 218495 218 218 60% 2e-58 29.26 777 B9DVK7.1 RecName: Full=Endonuclease MutS2; AltName:... Lactobacillu... NA 405566 216 268 69% 8e-58 29.48 785 A8YTJ4.1 RecName: Full=Endonuclease MutS2; AltName:... Thermus ther... NA 300852 214 261 50% 2e-57 32.67 744 Q5SHT5.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 512566 210 210 45% 9e-56 32.50 778 B5E7E8.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 487213 209 209 45% 3e-55 32.27 778 C1CPR7.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 487214 208 208 45% 5e-55 32.27 778 B1I9K1.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 373153 208 208 45% 6e-55 32.27 778 Q04M67.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 561276 207 207 45% 7e-55 32.27 778 B8ZLH4.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 170187 207 207 45% 7e-55 32.27 778 Q97SG5.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 516950 207 207 45% 7e-55 32.27 778 B2ILV2.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 488222 207 207 45% 7e-55 32.27 778 C1CCH3.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 488223 207 207 45% 7e-55 32.27 778 C1CIQ8.1 RecName: Full=Endonuclease MutS2; AltName:... Streptococcu... NA 488221 207 207 45% 9e-55 32.27 778 C1C5E4.1 RecName: Full=Endonuclease MutS2; AltName:... Treponema de... NA 243275 206 206 48% 5e-54 30.06 818 Q73MQ8.1 RecName: Full=Endonuclease MutS2; AltName:... Maridesulfov... NA 526222 201 201 53% 1e-52 28.68 769 C6BSW8.1 RecName: Full=Endonuclease MutS2; AltName:... Solidesulfov... NA 573370 198 198 50% 1e-51 28.69 773 C4XS37.1 RecName: Full=Endonuclease MutS2; AltName:... Borreliella ... NA 224326 179 179 62% 2e-45 27.42 780 O51125.1 RecName: Full=DNA mismatch repair protein MutS [Thermosipho... Thermosipho ... NA 391009 120 120 48% 2e-26 24.90 819 A6LLR1.1 RecName: Full=DNA mismatch repair protein MutS [Thermotoga... Thermotoga p... NA 390874 118 118 39% 8e-26 25.99 793 A5ILG0.1 RecName: Full=DNA mismatch repair protein MutS [Thermotoga sp.... Thermotoga s... NA 126740 113 113 42% 2e-24 24.76 793 B1LAW3.1 RecName: Full=DNA mismatch repair protein MutS [Thermotoga... Thermotoga n... NA 309803 111 111 39% 7e-24 25.59 801 B9K800.1 RecName: Full=DNA mismatch repair protein MutS [Staphylococcus... Staphylococc... NA 279808 112 112 34% 7e-24 25.89 883 Q4L5Z9.1 RecName: Full=DNA mismatch repair protein MutS [Candidatus... Candidatus K... NA 204669 111 111 31% 1e-23 28.20 882 Q1IN52.1 RecName: Full=DNA mismatch repair protein MutS [Brucella... Brucella ant... NA 439375 109 109 35% 3e-23 25.14 910 A6WV86.1 RecName: Full=DNA mismatch repair protein MutS [Chelativorans... Chelativoran... NA 266779 108 108 23% 7e-23 30.36 881 Q11B27.1 RecName: Full=DNA mismatch repair protein MutS [Brucella abort... Brucella abo... NA 359391 108 108 35% 8e-23 25.43 910 Q2YNZ0.1 RecName: Full=DNA mismatch repair protein MutS [Brucella suis... Brucella sui... NA 470137 108 108 35% 9e-23 25.43 910 B0CIQ5.1 RecName: Full=DNA mismatch repair protein MutS [Brucella canis... Brucella can... NA 483179 108 108 35% 9e-23 25.43 910 A9M792.1 RecName: Full=DNA mismatch repair protein MutS [Brucella ovis... Brucella ovi... NA 444178 108 108 35% 9e-23 25.43 898 A5VN83.1 RecName: Full=DNA mismatch repair protein MutS [Brucella... Brucella mel... NA 224914 108 108 35% 9e-23 25.43 910 Q8YES6.2 RecName: Full=DNA mismatch repair protein MutS [Thermus... Thermus ther... NA 262724 107 107 29% 1e-22 27.27 811 P61671.1 RecName: Full=DNA mismatch repair protein MutS [Thermus... Thermus ther... NA 300852 107 107 29% 1e-22 27.27 819 Q56239.3 RecName: Full=DNA mismatch repair protein MutS [Salinibacter... Salinibacter... NA 309807 107 107 31% 1e-22 28.01 908 Q2S254.1 RecName: Full=DNA mismatch repair protein MutS [Nitrobacter... Nitrobacter ... NA 323097 107 107 31% 2e-22 26.90 907 Q1QQJ4.1 RecName: Full=DNA mismatch repair protein MSH3; AltName:... Debaryomyces... NA 284592 106 106 26% 4e-22 27.34 1028 Q6BW83.2 RecName: Full=Endonuclease MutS2; AltName:... Helicobacter... NA 85962 105 105 43% 5e-22 24.82 762 O25338.1 RecName: Full=DNA mismatch repair protein MutS [Thermus... Thermus cald... NA 272 105 105 29% 5e-22 27.01 817 Q9ZIX6.1 RecName: Full=DNA mismatch repair protein MutS [Staphylococcus... Staphylococc... NA 176279 105 105 26% 6e-22 26.46 873 Q5HPP5.1 RecName: Full=Endonuclease MutS2; AltName:... Helicobacter... NA 85963 105 105 45% 6e-22 24.44 762 Q9ZLL4.1 RecName: Full=DNA mismatch repair protein MutS [Thermotoga... Thermotoga m... NA 243274 104 104 39% 1e-21 24.66 793 P74926.2 RecName: Full=DNA mismatch repair protein Msh6 [Dictyostelium... Dictyosteliu... NA 44689 104 104 26% 2e-21 29.41 1260 Q55GU9.1 RecName: Full=DNA mismatch repair protein MutS [Bradyrhizobium... Bradyrhizobi... NA 288000 103 103 29% 2e-21 27.40 910 A5ETJ3.1 RecName: Full=DNA mismatch repair protein MutS [Bradyrhizobium... Bradyrhizobi... NA 114615 103 103 33% 3e-21 25.45 916 A4YKQ0.1 RecName: Full=DNA mismatch repair protein MutS [Bartonella... Bartonella q... NA 283165 102 102 33% 5e-21 25.37 911 Q6G0X1.1 RecName: Full=DNA mismatch repair protein MutS [Rhodopseudomon... Rhodopseudom... NA 316055 102 102 29% 8e-21 25.62 906 Q07V29.1 RecName: Full=DNA mismatch repair protein MutS [Parvibaculum... Parvibaculum... NA 402881 101 101 25% 1e-20 27.39 908 A7HZ64.1 RecName: Full=DNA mismatch repair protein MSH3; AltName:... Candida albi... NA 237561 101 101 26% 2e-20 27.13 1037 Q59Y41.1 RecName: Full=DNA mismatch repair protein MSH2; AltName:... Saccharomyce... NA 559292 100 100 40% 2e-20 26.80 964 P25847.2 RecName: Full=DNA mismatch repair protein MutS [Escherichia co... Escherichia ... NA 409438 100 100 28% 3e-20 27.61 853 B6I6B9.1 RecName: Full=DNA mismatch repair protein MutS [Rhodopseudomon... Rhodopseudom... NA 316058 100 100 27% 3e-20 25.66 911 Q2J2S1.1 RecName: Full=DNA mismatch repair protein MutS [Bartonella... Bartonella b... NA 360095 100 100 41% 3e-20 24.28 914 A1UU95.1 RecName: Full=DNA mismatch repair protein Msh2; AltName:... Chlorocebus ... grivet monkey 9534 100 100 34% 3e-20 26.38 933 Q5XXB5.1 RecName: Full=DNA mismatch repair protein MutS [Mesorhizobium... Mesorhizobiu... NA 266835 100 100 26% 3e-20 26.64 909 Q98C21.1 RecName: Full=DNA mismatch repair protein MutS [Thermus... Thermus aqua... NA 271 99.8 99.8 28% 4e-20 25.46 811 Q56215.1 RecName: Full=DNA mismatch repair protein MSH2; Short=AtMSH2;... Arabidopsis ... thale cress 3702 99.8 99.8 21% 4e-20 31.58 937 O24617.1 RecName: Full=DNA mismatch repair protein Msh2; Short=hMSH2;... Homo sapiens human 9606 99.8 99.8 32% 5e-20 26.43 934 P43246.1 RecName: Full=DNA mismatch repair protein MutS [Nitrobacter... Nitrobacter ... NA 323098 99.4 99.4 27% 5e-20 27.68 888 Q3SVD4.1 RecName: Full=DNA mismatch repair protein MutS [Rhodopseudomon... Rhodopseudom... NA 316056 99.4 99.4 27% 6e-20 26.42 905 Q21CE8.2 RecName: Full=DNA mismatch repair protein Msh2; AltName:... Bos taurus domestic cattle 9913 99.4 99.4 32% 7e-20 26.11 934 Q3MHE4.1 RecName: Full=DNA mismatch repair protein Msh3; AltName:... Mus musculus house mouse 10090 99.0 99.0 25% 9e-20 29.12 1091 P13705.3 RecName: Full=DNA mismatch repair protein MutS [Escherichia co... Escherichia ... NA 362663 98.6 98.6 28% 1e-19 27.24 853 Q0TEC9.1 RecName: Full=DNA mismatch repair protein MutS [Escherichia co... Escherichia ... NA 405955 98.6 98.6 28% 1e-19 27.24 853 A1AES5.1 RecName: Full=DNA mismatch repair protein MutS [Escherichia co... Escherichia ... NA 574521 98.6 98.6 28% 1e-19 27.24 853 B7UHE9.1 RecName: Full=DNA mismatch repair protein MutS [Escherichia co... Escherichia ... NA 331111 98.6 98.6 28% 1e-19 27.24 855 A7ZQH3.2 RecName: Full=DNA mismatch repair protein MutS [Shigella... Shigella fle... NA 373384 98.6 98.6 28% 1e-19 27.24 853 Q0T1G0.1 RecName: Full=DNA mismatch repair protein MutS [Escherichia co... Escherichia ... NA 585055 98.6 98.6 28% 1e-19 27.24 853 B7LEE7.1 RecName: Full=DNA mismatch repair protein MutS [Escherichia co... Escherichia ... NA 444450 98.6 98.6 28% 1e-19 27.24 853 B5Z397.1 RecName: Full=DNA mismatch repair protein MutS [Escherichia co... Escherichia ... NA 585397 98.6 98.6 28% 1e-19 27.24 853 B7MYN6.1 RecName: Full=DNA mismatch repair protein MutS [Escherichia... Escherichia ... NA 585054 98.6 98.6 28% 1e-19 27.24 853 B7LWH8.1 RecName: Full=DNA mismatch repair protein MutS [Escherichia co... Escherichia ... NA 199310 98.6 98.6 28% 1e-19 27.24 853 Q8FEL3.1 RecName: Full=DNA mismatch repair protein MutS [Escherichia co... Escherichia ... NA 585057 98.6 98.6 28% 1e-19 27.24 853 B7NT79.1 RecName: Full=DNA mismatch repair protein MutS [Escherichia co... Escherichia ... NA 439855 98.6 98.6 28% 1e-19 27.24 853 B1LQ55.1 RecName: Full=DNA mismatch repair protein MutS [Shigella boydi... Shigella boy... NA 344609 98.2 98.2 28% 1e-19 27.24 853 B2TZJ7.1 RecName: Full=DNA mismatch repair protein MutS [Clostridioides... Clostridioid... NA 272563 98.6 98.6 44% 1e-19 23.33 947 Q187T6.2 RecName: Full=DNA mismatch repair protein MutS [Cereibacter... Cereibacter ... NA 349102 98.2 98.2 23% 1e-19 28.25 876 A4WVX8.1 RecName: Full=DNA mismatch repair protein MutS [Sinorhizobium... Sinorhizobiu... NA 266834 98.6 98.6 27% 1e-19 26.28 916 P56883.1 RecName: Full=DNA mismatch repair protein MutS [Sinorhizobium... Sinorhizobiu... NA 366394 98.6 98.6 23% 1e-19 28.25 915 A6U5G0.1 RecName: Full=DNA mismatch repair protein MutS [Escherichia co... Escherichia ... NA 331112 98.2 98.2 28% 1e-19 27.24 853 A8A3L2.1 RecName: Full=DNA mismatch repair protein MutS [Pseudomonas... Pseudomonas ... NA 76869 98.2 98.2 24% 1e-19 27.78 861 B0KSD2.2 RecName: Full=DNA mismatch repair protein MutS [Rhizobium etli... Rhizobium et... NA 347834 98.2 98.2 24% 2e-19 26.92 908 Q2KD76.1 RecName: Full=DNA mismatch repair protein MutS [Bartonella... Bartonella t... NA 382640 97.8 97.8 45% 2e-19 23.35 914 A9ILT1.1 RecName: Full=DNA mismatch repair protein MutS [Roseiflexus sp... Roseiflexus ... NA 357808 98.2 98.2 30% 2e-19 24.92 1085 A5UZK7.1 RecName: Full=DNA mismatch repair protein MutS [Pseudomonas... Pseudomonas ... NA 384676 97.8 97.8 23% 2e-19 27.23 857 Q1I659.1 RecName: Full=DNA mismatch repair protein MutS [Pseudomonas... Pseudomonas ... NA 216595 97.8 97.8 23% 2e-19 28.02 863 C3KCT2.1 RecName: Full=DNA mismatch repair protein MutS [Pseudomonas... Pseudomonas ... NA 390235 97.4 97.4 24% 2e-19 28.21 857 B1JB25.1 RecName: Full=DNA mismatch repair protein Msh3; Short=hMSH3;... Homo sapiens human 9606 97.8 97.8 29% 2e-19 27.52 1137 P20585.4 RecName: Full=DNA mismatch repair protein MutS [Acholeplasma... Acholeplasma... NA 441768 97.4 97.4 26% 2e-19 26.67 841 A9NGL6.1 RecName: Full=DNA mismatch repair protein MutS [Rhodopseudomon... Rhodopseudom... NA 258594 96.7 96.7 31% 4e-19 24.68 907 P61670.1 RecName: Full=DNA mismatch repair protein MutS [Agrobacterium... Agrobacteriu... NA 176299 96.7 96.7 26% 4e-19 27.17 904 Q8UIF2.1 RecName: Full=DNA mismatch repair protein MutS [Cereibacter... Cereibacter ... NA 272943 96.7 96.7 26% 5e-19 28.40 875 Q3IYI5.1 RecName: Full=DNA mismatch repair protein MutS [Shigella... Shigella dys... NA 300267 96.3 96.3 28% 5e-19 26.87 853 Q32CJ6.1 RecName: Full=DNA mismatch repair protein MutS [Azotobacter... Azotobacter ... NA 354 96.3 96.3 24% 5e-19 26.72 855 P27345.1 RecName: Full=DNA mismatch repair protein MutS [Azotobacter... Azotobacter ... NA 322710 96.3 96.3 24% 5e-19 26.72 855 C1DSR1.1 RecName: Full=DNA mismatch repair protein MutS [Chromohalobact... Chromohaloba... NA 290398 96.3 96.3 24% 5e-19 26.52 859 Q1QZX5.1 RecName: Full=DNA mismatch repair protein MutS [Nitrosospira... Nitrosospira... NA 323848 96.3 96.3 22% 6e-19 29.30 902 Q2YB94.1 RecName: Full=DNA mismatch repair protein MutS [Cereibacter... Cereibacter ... NA 349101 96.3 96.3 26% 6e-19 28.02 880 A3PNR5.1 RecName: Full=DNA mismatch repair protein MutS [Pseudomonas... Pseudomonas ... NA 160488 95.9 95.9 24% 7e-19 27.78 857 Q88ME7.1 RecName: Full=DNA mismatch repair protein MutS [Stutzerimonas... Stutzerimona... NA 379731 95.9 95.9 24% 7e-19 26.92 859 A4VJN9.2 RecName: Full=DNA mismatch repair protein MSH3; AltName:... Scheffersomy... NA 322104 95.9 95.9 19% 8e-19 30.16 1025 A3LU10.3 RecName: Full=DNA mismatch repair protein MutS [Bradyrhizobium... Bradyrhizobi... NA 224911 95.5 95.5 31% 9e-19 25.00 912 Q89VX1.1 RecName: Full=DNA mismatch repair protein MutS [Roseiflexus... Roseiflexus ... NA 383372 95.5 95.5 30% 1e-18 25.25 1088 A7NPT5.1 RecName: Full=DNA mismatch repair protein MutS [Pseudomonas... Pseudomonas ... NA 351746 95.5 95.5 23% 1e-18 26.79 857 A5W816.1 RecName: Full=DNA mismatch repair protein MutS [Enterobacter s... Enterobacter... NA 399742 95.5 95.5 27% 1e-18 26.54 853 A4WDU5.1 RecName: Full=DNA mismatch repair protein MutS [Bartonella... Bartonella h... NA 283166 95.5 95.5 24% 1e-18 26.61 914 Q6G542.1 RecName: Full=DNA mismatch repair protein MutS [Salmonella... Salmonella e... NA 41514 95.1 95.1 28% 1e-18 26.87 860 A9MF43.1 RecName: Full=DNA mismatch repair protein MSH1, mitochondrial;... Arabidopsis ... thale cress 3702 95.1 95.1 19% 1e-18 30.27 1118 Q84LK0.1 RecName: Full=DNA mismatch repair protein MutS [Cronobacter... Cronobacter ... NA 290339 94.7 94.7 23% 1e-18 28.51 853 A7MJ43.1 RecName: Full=DNA mismatch repair protein MSH3; AltName:... Saccharomyce... NA 307796 95.1 95.1 30% 1e-18 26.07 1018 A6ZTR3.2 RecName: Full=DNA mismatch repair protein MutS [Shewanella... Shewanella d... NA 318161 94.7 94.7 26% 2e-18 27.78 862 Q12PY3.1 RecName: Full=DNA mismatch repair protein MutS [Aliivibrio... Aliivibrio f... NA 388396 94.7 94.7 29% 2e-18 26.26 854 B5FAC8.1 RecName: Full=DNA mismatch repair protein MutS [Paracoccus... Paracoccus d... NA 318586 94.7 94.7 29% 2e-18 25.27 878 A1B095.1 RecName: Full=DNA mismatch repair protein MutS [Klebsiella... Klebsiella p... NA 272620 94.7 94.7 28% 2e-18 26.87 853 A6TD24.1 RecName: Full=DNA mismatch repair protein MutS [Pseudomonas... Pseudomonas ... NA 381754 94.7 94.7 23% 2e-18 28.33 855 A6V1G8.1 RecName: Full=DNA mismatch repair protein MutS [Aliivibrio... Aliivibrio f... NA 312309 94.7 94.7 29% 2e-18 26.26 854 Q5E7G7.2 RecName: Full=DNA mismatch repair protein Msh2; AltName:... Mus musculus house mouse 10090 94.7 94.7 32% 2e-18 26.11 935 P43247.1 RecName: Full=DNA mismatch repair protein MutS [Klebsiella... Klebsiella v... NA 507522 94.7 94.7 28% 2e-18 26.87 853 B5XV49.1 RecName: Full=DNA mismatch repair protein MutS [Pseudomonas... Pseudomonas ... NA 208963 94.4 94.4 23% 2e-18 28.33 855 Q02R92.1 RecName: Full=DNA mismatch repair protein MutS [Salmonella... Salmonella e... NA 439843 94.4 94.4 28% 2e-18 26.49 855 B4TTU0.1 RecName: Full=DNA mismatch repair protein MutS [Rhizobium... Rhizobium jo... NA 216596 94.4 94.4 24% 2e-18 26.07 908 Q1MMA5.1 RecName: Full=DNA mismatch repair protein MutS [Salmonella... Salmonella e... NA 476213 94.0 94.0 28% 2e-18 26.49 855 C0PWV2.1 RecName: Full=DNA mismatch repair protein MutS [Salmonella... Salmonella e... NA 1016998 94.0 94.0 28% 3e-18 26.49 855 A9N1F8.2 RecName: Full=DNA mismatch repair protein MutS [Salmonella... Salmonella e... NA 423368 94.0 94.0 28% 3e-18 26.49 855 B4T436.1 RecName: Full=DNA mismatch repair protein MutS [Marinobacter... Marinobacter... NA 351348 94.0 94.0 27% 3e-18 26.07 874 A1U2E8.1 RecName: Full=DNA mismatch repair protein MutS [Pseudomonas... Pseudomonas ... NA 208964 94.0 94.0 23% 3e-18 28.33 855 Q9HY08.1 RecName: Full=DNA mismatch repair protein MutS [Pseudomonas... Pseudomonas ... NA 557722 94.0 94.0 23% 3e-18 28.33 855 B7V8C8.1 RecName: Full=DNA mismatch repair protein MutS [Salmonella... Salmonella e... NA 295319 94.0 94.0 28% 3e-18 26.49 855 Q5PEE6.1 RecName: Full=DNA mismatch repair protein MutS [Salmonella... Salmonella e... NA 439851 94.0 94.0 28% 3e-18 26.49 855 B5FTQ5.1 RecName: Full=DNA mismatch repair protein MutS [Pectobacterium... Pectobacteri... NA 218491 93.6 93.6 23% 3e-18 27.60 854 Q6D8C1.1 RecName: Full=DNA mismatch repair protein MutS [Pectobacterium... Pectobacteri... NA 561230 93.6 93.6 23% 4e-18 27.60 854 C6DAK6.1 RecName: Full=DNA mismatch repair protein MutS [Actinobacillus... Actinobacill... NA 416269 93.6 93.6 26% 4e-18 26.88 864 A3N2Q0.1 RecName: Full=DNA mismatch repair protein MutS [Neisseria... Neisseria me... NA 122587 93.2 93.2 28% 5e-18 26.69 864 Q9JWT7.1 RecName: Full=DNA mismatch repair protein msh-2 [Neurospora... Neurospora c... NA 367110 93.2 93.2 26% 5e-18 26.98 937 O13396.1 RecName: Full=DNA mismatch repair protein MSH3; Short=AtMSH3;... Arabidopsis ... thale cress 3702 93.6 93.6 41% 5e-18 22.73 1081 O65607.2 RecName: Full=DNA mismatch repair protein MutS [Pseudomonas... Pseudomonas ... NA 220664 93.2 93.2 23% 5e-18 27.59 859 Q4KHE3.1 RecName: Full=DNA mismatch repair protein MutS [Aromatoleum... Aromatoleum ... NA 76114 93.2 93.2 25% 5e-18 27.20 879 Q5NYP9.1 RecName: Full=DNA mismatch repair protein MutS [Coxiella... Coxiella bur... NA 360115 93.2 93.2 23% 5e-18 28.70 859 A9NCN3.1 RecName: Full=DNA mismatch repair protein MSH1, mitochondrial;... Saccharomyce... NA 559292 93.2 93.2 19% 5e-18 30.41 959 P25846.2 RecName: Full=DNA mismatch repair protein MutS [Coxiella... Coxiella bur... NA 434922 93.2 93.2 23% 5e-18 28.70 859 A9KG24.1 RecName: Full=DNA mismatch repair protein MutS [Coxiella... Coxiella bur... NA 227377 92.8 92.8 23% 6e-18 28.70 859 Q83CQ2.1 RecName: Full=DNA mismatch repair protein MutS [Actinobacillus... Actinobacill... NA 537457 92.8 92.8 26% 6e-18 26.88 864 B3H2J9.1 RecName: Full=DNA mismatch repair protein MutS [Actinobacillus... Actinobacill... NA 434271 92.8 92.8 26% 6e-18 26.88 864 B0BRS8.1 RecName: Full=DNA mismatch repair protein Msh2; AltName:... Rattus norve... Norway rat 10116 92.8 92.8 32% 7e-18 25.48 933 P54275.1 RecName: Full=DNA mismatch repair protein MutS [Erwinia... Erwinia tasm... NA 465817 92.8 92.8 23% 7e-18 28.83 853 B2VG22.1 RecName: Full=DNA mismatch repair protein MutS [Francisella... Francisella ... NA 393011 92.4 92.4 23% 8e-18 28.57 855 Q0BNM7.1 RecName: Full=DNA mismatch repair protein MutS [Francisella... Francisella ... NA 458234 92.4 92.4 23% 8e-18 28.57 844 A7N9Y6.1 RecName: Full=DNA mismatch repair protein MutS [Pseudomonas... Pseudomonas ... NA 205918 92.4 92.4 23% 9e-18 27.16 859 Q4ZWP5.1 RecName: Full=DNA mismatch repair protein MutS [Roseobacter... Roseobacter ... NA 375451 92.4 92.4 29% 9e-18 27.11 878 Q16D05.1 RecName: Full=DNA mismatch repair protein MutS [Neisseria... Neisseria me... NA 272831 92.4 92.4 28% 9e-18 26.69 864 A1KWM6.1 RecName: Full=DNA mismatch repair protein MutS [Buchnera... Buchnera aph... NA 198804 92.0 92.0 27% 9e-18 29.28 805 Q8K9D2.1 RecName: Full=DNA mismatch repair protein MutS [Neisseria... Neisseria me... NA 122586 92.4 92.4 28% 1e-17 26.69 864 Q9JX94.1 RecName: Full=DNA mismatch repair protein MutS [Pseudomonas... Pseudomonas ... NA 264730 92.0 92.0 23% 1e-17 27.16 859 Q48F92.1 RecName: Full=DNA mismatch repair protein MutS [Francisella... Francisella ... NA 441952 92.0 92.0 23% 1e-17 28.57 844 B2SEQ6.1 RecName: Full=DNA mismatch repair protein MSH3; AltName:... Meyerozyma g... NA 294746 92.0 92.0 22% 1e-17 28.38 960 A5DEV6.2 RecName: Full=DNA mismatch repair protein MutS [Francisella... Francisella ... NA 418136 92.0 92.0 23% 1e-17 28.57 844 A4IXL2.1 RecName: Full=DNA mismatch repair protein MutS [Francisella... Francisella ... NA 393115 92.0 92.0 23% 1e-17 28.57 857 Q14GB1.1 RecName: Full=DNA mismatch repair protein MutS [Shewanella... Shewanella f... NA 318167 92.0 92.0 22% 1e-17 28.50 861 Q086A1.1 RecName: Full=DNA mismatch repair protein MutS [Yersinia... Yersinia ent... NA 393305 91.7 91.7 23% 1e-17 26.70 851 A1JJU1.1 RecName: Full=DNA mismatch repair protein MutS [Buchnera... Buchnera aph... NA 563178 91.3 91.3 22% 2e-17 28.77 802 B8D9K7.1 RecName: Full=DNA mismatch repair protein MutS [Buchnera... Buchnera aph... NA 107806 91.3 91.3 22% 2e-17 28.77 802 P57504.1 RecName: Full=DNA mismatch repair protein MutS [Buchnera... Buchnera aph... NA 561501 91.3 91.3 22% 2e-17 28.77 802 B8D7V9.1 RecName: Full=DNA mismatch repair protein MutS [Pseudomonas... Pseudomonas ... NA 223283 91.3 91.3 23% 2e-17 26.72 855 Q87XW6.1 RecName: Full=DNA mismatch repair protein MutS [Shewanella... Shewanella w... NA 392500 90.9 90.9 23% 2e-17 27.60 858 B1KPS7.1 RecName: Full=DNA mismatch repair protein MutS [Citrobacter... Citrobacter ... NA 290338 90.9 90.9 28% 3e-17 26.12 853 A8ANU8.1 RecName: Full=DNA mismatch repair protein MutS [Methylococcus... Methylococcu... NA 243233 90.9 90.9 24% 3e-17 27.39 854 Q60BA1.1 RecName: Full=DNA mismatch repair protein MutS [Yersinia pesti... Yersinia pes... NA 386656 90.9 90.9 23% 3e-17 26.70 851 A4TQ04.1 RecName: Full=DNA mismatch repair protein MutS [Yersinia pesti... Yersinia pes... NA 360102 90.9 90.9 23% 3e-17 26.70 854 Q1C471.1 RecName: Full=DNA mismatch repair protein MutS [Francisella... Francisella ... NA 401614 90.5 90.5 23% 3e-17 28.64 844 A0Q809.1 RecName: Full=DNA mismatch repair protein MutS [Pseudomonas... Pseudomonas ... NA 205922 90.5 90.5 23% 3e-17 26.58 860 Q3KH79.1 RecName: Full=DNA mismatch repair protein MutS [Neisseria... Neisseria go... NA 242231 90.5 90.5 28% 3e-17 26.32 864 Q5F5J4.1 RecName: Full=DNA mismatch repair protein MutS [Yersinia... Yersinia pse... NA 502800 90.5 90.5 23% 3e-17 26.70 851 B1JJF1.1 RecName: Full=Probable DNA mismatch repair protein Msh6... Drosophila m... fruit fly 7227 90.5 90.5 33% 4e-17 27.19 1190 Q9VUM0.2 RecName: Full=DNA mismatch repair protein MutS [Yersinia... Yersinia pse... NA 349747 90.1 90.1 23% 4e-17 26.70 851 A7FLX1.1 RecName: Full=DNA mismatch repair protein MutS [Serratia... Serratia pro... NA 399741 89.7 89.7 23% 5e-17 27.15 851 A8G9Z9.1 RecName: Full=DNA mismatch repair protein MutS [Rhodopseudomon... Rhodopseudom... NA 316057 89.7 89.7 27% 5e-17 25.09 923 Q13ED0.1 RecName: Full=DNA mismatch repair protein spellchecker 1... Drosophila m... fruit fly 7227 89.7 89.7 26% 6e-17 26.36 917 P43248.4 RecName: Full=DNA mismatch repair protein MutS [Candidatus... Candidatus S... NA 234267 89.7 89.7 22% 6e-17 29.09 869 Q01X96.1 RecName: Full=DNA mismatch repair protein MSH3; AltName:... Eremothecium... NA 284811 89.7 89.7 26% 6e-17 25.29 1032 Q759V4.1 RecName: Full=DNA mismatch repair protein MutS [Colwellia... Colwellia ps... NA 167879 89.4 89.4 26% 7e-17 25.10 872 Q47WN0.1 RecName: Full=DNA mismatch repair protein MutS [Candidatus... Candidatus H... NA 572265 89.0 89.0 22% 9e-17 26.73 854 C4K6P7.1 RecName: Full=DNA mismatch repair protein MSH2; AltName:... Zea mays NA 4577 89.0 89.0 23% 9e-17 28.82 942 Q9XGC9.1 RecName: Full=DNA mismatch repair protein MSH3; AltName:... Lodderomyces... NA 379508 89.0 89.0 22% 1e-16 27.35 993 A5DYV8.1 RecName: Full=DNA mismatch repair protein MutS [Neisseria... Neisseria me... NA 374833 89.0 89.0 26% 1e-16 26.27 864 A9M4L8.1 RecName: Full=DNA mismatch repair protein MutS [Shewanella... Shewanella b... NA 399599 88.6 88.6 19% 1e-16 29.44 856 A9KYG1.1 RecName: Full=DNA mismatch repair protein MutS [Shewanella... Shewanella b... NA 402882 88.2 88.2 19% 1e-16 29.44 856 A6WR19.1 RecName: Full=DNA mismatch repair protein MutS [Haemophilus... Haemophilus ... NA 71421 88.2 88.2 26% 2e-16 24.71 861 P44834.1 RecName: Full=DNA mismatch repair protein MutS [Dechloromonas... Dechloromona... NA 159087 88.2 88.2 31% 2e-16 25.90 860 Q47DJ8.1 RecName: Full=DNA mismatch repair protein MutS [Neisseria... Neisseria go... NA 521006 87.8 87.8 28% 2e-16 25.94 864 B4RPP9.1 RecName: Full=DNA mismatch repair protein MutS [Zymomonas... Zymomonas mo... NA 264203 87.8 87.8 23% 2e-16 27.23 869 Q5NL79.2 RecName: Full=DNA mismatch repair protein MutS [Shewanella sp.... Shewanella s... NA 60481 87.8 87.8 19% 2e-16 29.44 861 Q0HXG1.1 RecName: Full=DNA mismatch repair protein MutS [Proteus... Proteus mira... NA 529507 87.8 87.8 27% 2e-16 25.68 854 B4F220.1 RecName: Full=DNA mismatch repair protein MutS [Photorhabdus... Photorhabdus... NA 243265 87.8 87.8 28% 2e-16 25.75 851 Q7N8K0.1 RecName: Full=DNA mismatch repair protein MutS [Actinobacillus... Actinobacill... NA 339671 87.4 87.4 26% 3e-16 25.97 858 A6VL76.1 RecName: Full=DNA mismatch repair protein MutS [Paraglaciecola... Paraglacieco... NA 3042615 87.8 87.8 27% 3e-16 24.71 889 Q15QR9.1 RecName: Full=DNA mismatch repair protein MutS... Pseudoaltero... NA 326442 87.4 87.4 23% 3e-16 26.13 861 Q3IDC8.1 RecName: Full=DNA mismatch repair protein MutS [Haemophilus... Haemophilus ... NA 281310 87.4 87.4 26% 3e-16 23.92 861 Q4QML2.1 RecName: Full=DNA mismatch repair protein MutS [Histophilus... Histophilus ... NA 205914 87.4 87.4 27% 3e-16 25.67 856 Q0I1B8.1 RecName: Full=DNA mismatch repair protein MutS [Haemophilus... Haemophilus ... NA 374930 87.0 87.0 28% 3e-16 24.34 861 A5UE20.1 RecName: Full=DNA mismatch repair protein MSH3; AltName:... Nakaseomyces... NA 284593 87.4 87.4 37% 4e-16 21.89 1025 Q6FVN6.1 RecName: Full=DNA mismatch repair protein MutS [[Haemophilus]... [Haemophilus... NA 233412 87.0 87.0 26% 4e-16 25.87 866 Q7VKA1.1 RecName: Full=DNA mismatch repair protein MutS [Histophilus... Histophilus ... NA 228400 87.0 87.0 27% 4e-16 25.38 859 B0UWV7.1 RecName: Full=DNA mismatch repair protein MutS [Aliivibrio... Aliivibrio s... NA 316275 86.7 86.7 19% 4e-16 28.89 855 B6ENH6.1 RecName: Full=DNA mismatch repair protein MutS [Shewanella... Shewanella b... NA 407976 86.7 86.7 19% 5e-16 29.44 856 B8E8U0.1 RecName: Full=DNA mismatch repair protein MSH3; AltName:... Yarrowia lip... NA 284591 86.7 86.7 30% 5e-16 26.92 990 Q6CHE5.1 RecName: Full=DNA mismatch repair protein MutS [Vibrio... Vibrio parah... NA 223926 86.3 86.3 22% 6e-16 26.51 853 Q87LQ9.1 RecName: Full=DNA mismatch repair protein MutS [Edwardsiella... Edwardsiella... NA 634503 86.3 86.3 28% 6e-16 26.12 852 C5BGI4.1 RecName: Full=DNA mismatch repair protein Msh3; AltName:... Dictyosteliu... NA 44689 86.7 86.7 26% 7e-16 25.66 1428 Q1ZXH0.1 RecName: Full=DNA mismatch repair protein MutS [Shewanella sp.... Shewanella s... NA 351745 86.3 86.3 19% 7e-16 28.89 856 A1RHG2.1 RecName: Full=DNA mismatch repair protein MutS [Dichelobacter... Dichelobacte... NA 246195 85.9 85.9 40% 8e-16 23.47 861 A5EX62.1 RecName: Full=DNA mismatch repair protein MutS [Shewanella... Shewanella l... NA 323850 85.9 85.9 22% 9e-16 27.57 855 A3QC86.1 RecName: Full=DNA mismatch repair protein MutS [Rhizorhabdus... Rhizorhabdus... NA 392499 85.9 85.9 23% 9e-16 27.35 904 A5VA00.1 RecName: Full=DNA mismatch repair protein MutS [Shewanella sp.... Shewanella s... NA 94122 85.9 85.9 19% 9e-16 28.89 861 A0KU91.1 RecName: Full=DNA mismatch repair protein MutS [Shewanella... Shewanella o... NA 211586 85.9 85.9 19% 1e-15 28.89 856 Q8EBR9.1 RecName: Full=DNA mismatch repair protein MutS [Shewanella sp.... Shewanella s... NA 60480 85.9 85.9 19% 1e-15 28.89 861 Q0HL63.1 RecName: Full=DNA mismatch repair protein MutS [Shewanella... Shewanella p... NA 398579 85.5 85.5 19% 1e-15 28.89 859 A8H1T4.1 RecName: Full=DNA mismatch repair protein MutS [Alcanivorax... Alcanivorax ... NA 393595 85.5 85.5 31% 1e-15 21.45 859 Q0VNJ1.1 RecName: Full=DNA mismatch repair protein MutS [Shewanella... Shewanella b... NA 325240 85.5 85.5 19% 1e-15 28.89 856 A3D786.1 RecName: Full=DNA mismatch repair protein MutS [Alkalilimnicol... Alkalilimnic... NA 187272 85.1 85.1 34% 2e-15 24.32 878 Q0A8K3.1 RecName: Full=DNA mismatch repair protein MutS [Syntrophomonas... Syntrophomon... NA 335541 84.7 84.7 24% 2e-15 26.61 859 Q0AYB5.1 RecName: Full=DNA mismatch repair protein MutS [Halorhodospira... Halorhodospi... NA 349124 84.7 84.7 24% 2e-15 25.32 868 A1WXK9.1 RecName: Full=DNA mismatch repair protein Msh2; AltName:... Dictyosteliu... NA 44689 84.7 84.7 22% 2e-15 28.57 937 Q553L4.1 RecName: Full=DNA mismatch repair protein MutS [Nitrosomonas... Nitrosomonas... NA 335283 84.3 84.3 26% 3e-15 25.50 880 Q0AEI7.1 RecName: Full=DNA mismatch repair protein MutS [Buchnera... Buchnera aph... NA 224915 84.3 84.3 22% 3e-15 27.85 800 Q89AD3.1 RecName: Full=DNA mismatch repair protein MutS [Pasteurella... Pasteurella ... NA 272843 84.0 84.0 26% 3e-15 25.00 860 P57972.1 RecName: Full=DNA mismatch repair protein MutS [Nitrosococcus... Nitrosococcu... NA 323261 84.0 84.0 19% 3e-15 29.12 863 Q3JCL5.1 RecName: Full=DNA mismatch repair protein MutS [Sodalis... Sodalis glos... NA 343509 83.6 83.6 22% 5e-15 26.98 854 Q2NVL9.1 RecName: Full=DNA mismatch repair protein MSH3; AltName:... Kluyveromyce... NA 284590 83.6 83.6 26% 5e-15 24.71 1029 Q6CSR1.1 RecName: Full=DNA mismatch repair protein MutS [Vibrio cholera... Vibrio chole... NA 345073 83.6 83.6 22% 5e-15 26.39 862 A5F9C4.1 RecName: Full=DNA mismatch repair protein MSH7; Short=AtMSH7;... Arabidopsis ... thale cress 3702 83.6 83.6 22% 5e-15 25.56 1109 Q9SMV7.1 RecName: Full=DNA mismatch repair protein MutS [Hydrogenovibri... Hydrogenovib... NA 317025 83.2 83.2 20% 6e-15 28.65 871 Q31F87.1 RecName: Full=DNA mismatch repair protein MSH3; AltName:... Vanderwaltoz... NA 436907 83.2 83.2 33% 6e-15 23.78 1023 A7TTQ1.1 RecName: Full=DNA mismatch repair protein MutS [Shewanella... Shewanella h... NA 458817 83.2 83.2 19% 7e-15 28.89 859 B0TK13.1 RecName: Full=DNA mismatch repair protein MutS [Shewanella... Shewanella s... NA 425104 82.8 82.8 22% 7e-15 26.98 859 A8FST7.1 RecName: Full=DNA mismatch repair protein MutS [Shewanella... Shewanella a... NA 326297 82.8 82.8 19% 8e-15 29.44 854 A1S4E6.1 RecName: Full=DNA mismatch repair protein MutS [Burkholderia... Burkholderia... NA 357348 82.8 82.8 26% 9e-15 25.30 891 A3NWZ4.2 RecName: Full=DNA mismatch repair protein MutS [Burkholderia... Burkholderia... NA 320373 82.4 82.4 26% 9e-15 25.30 891 A3NB64.1 RecName: Full=DNA mismatch repair protein MutS [Burkholderia... Burkholderia... NA 320388 82.4 82.4 26% 9e-15 25.30 891 A1V5I2.2 RecName: Full=DNA mismatch repair protein MutS [Paraburkholder... Paraburkhold... NA 398527 82.4 82.4 22% 1e-14 26.17 894 B2SXQ9.1 RecName: Full=DNA mismatch repair protein MutS [Burkholderia... Burkholderia... NA 272560 82.4 82.4 26% 1e-14 25.30 890 Q63SR9.1 RecName: Full=DNA mismatch repair protein MutS [Paraburkholder... Paraburkhold... NA 266265 82.4 82.4 22% 1e-14 26.17 894 Q13X51.2 RecName: Full=DNA mismatch repair protein MutS [Francisella... Francisella ... NA 484022 81.6 81.6 19% 2e-14 26.82 848 B0TX99.1 RecName: Full=DNA mismatch repair protein MutS [Burkholderia... Burkholderia... NA 320372 82.0 82.0 26% 2e-14 25.30 890 Q3JQS6.2 RecName: Full=DNA mismatch repair protein MutS [Aeromonas... Aeromonas hy... NA 380703 81.6 81.6 30% 2e-14 26.48 860 A0KPG5.1 RecName: Full=DNA mismatch repair protein MutS [Paraburkholder... Paraburkhold... NA 391038 81.6 81.6 22% 2e-14 26.64 892 B2JIT0.1 RecName: Full=DNA mismatch repair protein MutS [[Mannheimia]... [Mannheimia]... NA 221988 81.3 81.3 22% 2e-14 26.05 861 Q65QA9.1 RecName: Full=DNA mismatch repair protein MutS [Baumannia... Baumannia ci... NA 374463 80.9 80.9 22% 3e-14 27.44 855 Q1LTQ0.1 RecName: Full=DNA mismatch repair protein MutS [Shewanella... Shewanella p... NA 225849 80.5 80.5 19% 4e-14 27.78 860 B8CJQ5.1 RecName: Full=DNA mismatch repair protein MutS [Psychromonas... Psychromonas... NA 357804 80.5 80.5 24% 4e-14 25.32 856 A1T004.1 RecName: Full=DNA mismatch repair protein MutS [Nitrosomonas... Nitrosomonas... NA 228410 80.5 80.5 31% 4e-14 24.17 873 Q82U08.1 RecName: Full=DNA mismatch repair protein MutS [Aeromonas... Aeromonas sa... NA 382245 80.5 80.5 22% 5e-14 27.98 851 A4SIL2.1 RecName: Full=DNA mismatch repair protein MutS [Photobacterium... Photobacteri... NA 298386 80.1 80.1 19% 5e-14 27.07 856 Q6LMU0.1 RecName: Full=DNA mismatch repair protein MutS [Vibrio... Vibrio vulni... NA 216895 80.1 80.1 26% 5e-14 23.81 853 Q8DC53.2 RecName: Full=DNA mismatch repair protein MutS [Burkholderia... Burkholderia... NA 271848 80.1 80.1 26% 5e-14 24.90 893 Q2SXA6.1 RecName: Full=DNA mismatch repair protein MutS [Vibrio... Vibrio vulni... NA 196600 80.1 80.1 23% 5e-14 24.77 853 Q7MHR2.2 RecName: Full=DNA mismatch repair protein MutS [Vibrio... Vibrio campb... NA 2902295 80.1 80.1 23% 6e-14 25.57 853 A7MTT8.1 RecName: Full=DNA mismatch repair protein MutS [Xanthomonas... Xanthomonas ... NA 190485 80.1 80.1 27% 6e-14 24.44 891 Q8PBB5.1 RecName: Full=DNA mismatch repair protein MutS [Xanthomonas... Xanthomonas ... NA 314565 79.7 79.7 27% 6e-14 24.44 873 Q4US90.2 RecName: Full=DNA mismatch repair protein MutS [Vibrio... Vibrio atlan... NA 575788 79.3 79.3 19% 9e-14 27.07 853 B7VK59.1 RecName: Full=DNA mismatch repair protein MutS [Burkholderia... Burkholderia... NA 216591 79.3 79.3 22% 9e-14 26.17 885 B4ED83.1 RecName: Full=DNA mismatch repair protein MutS [Bordetella... Bordetella b... NA 257310 78.6 78.6 33% 2e-13 22.47 876 Q7WLT5.2 RecName: Full=DNA mismatch repair protein MutS [Bordetella... Bordetella p... NA 257313 78.2 78.2 34% 2e-13 22.36 883 Q7VY01.1 RecName: Full=DNA mismatch repair protein msh2... Schizosaccha... NA 284812 78.6 78.6 23% 2e-13 26.34 982 O74773.2 RecName: Full=DNA mismatch repair protein MutS [Bordetella... Bordetella p... NA 257311 78.2 78.2 33% 2e-13 22.47 883 Q7W880.2 RecName: Full=DNA mismatch repair protein MutS [Xylella... Xylella fast... NA 183190 78.2 78.2 27% 2e-13 23.31 868 Q87CI8.1 RecName: Full=DNA mismatch repair protein MutS [Rhodoferax... Rhodoferax f... NA 338969 78.2 78.2 32% 2e-13 23.58 882 Q21XE3.1 RecName: Full=DNA mismatch repair protein MutS [Hahella... Hahella chej... NA 349521 77.8 77.8 22% 2e-13 24.65 860 Q2SBR5.2 RecName: Full=MutS protein homolog 5 [Caenorhabditis elegans] Caenorhabdit... NA 6239 77.0 77.0 26% 5e-13 24.90 1369 Q19272.2 RecName: Full=DNA mismatch repair protein MutS [Elusimicrobium... Elusimicrobi... NA 445932 76.6 76.6 24% 6e-13 27.23 851 B2KB17.1 RecName: Full=DNA mismatch repair protein msh3; AltName:... Botrytis cin... NA 332648 76.3 76.3 23% 9e-13 27.35 1134 A6RPB6.3 RecName: Full=DNA mismatch repair protein MutS [Bordetella avi... Bordetella a... NA 360910 75.9 75.9 20% 9e-13 27.23 875 Q2KWZ4.1 RecName: Full=DNA mismatch repair protein MutS [Burkholderia... Burkholderia... NA 269482 75.9 75.9 27% 1e-12 23.83 886 A4JFW7.1 RecName: Full=DNA mismatch repair protein MutS [Burkholderia... Burkholderia... NA 482957 75.5 75.5 22% 1e-12 25.70 885 Q39EX8.1 RecName: Full=DNA mismatch repair protein MutS [Burkholderia... Burkholderia... NA 331272 75.5 75.5 22% 1e-12 25.70 885 A0K8L2.1 RecName: Full=DNA mismatch repair protein MutS [Burkholderia... Burkholderia... NA 406425 75.5 75.5 22% 1e-12 25.70 885 B1JUW8.1 RecName: Full=DNA mismatch repair protein MutS [Xanthomonas... Xanthomonas ... NA 291331 75.5 75.5 26% 2e-12 24.51 873 Q5H2C5.1 RecName: Full=DNA mismatch repair protein MutS [Xanthomonas... Xanthomonas ... NA 316273 75.1 75.1 26% 2e-12 24.51 873 Q3BVY0.1 RecName: Full=DNA mismatch repair protein MutS [Burkholderia... Burkholderia... NA 331271 75.1 75.1 22% 2e-12 25.70 885 Q1BHQ1.1 RecName: Full=DNA mismatch repair protein MutS [Xanthomonas... Xanthomonas ... NA 1203463 75.1 75.1 26% 2e-12 24.51 902 Q8PMX2.1 RecName: Full=DNA mismatch repair protein MutS [Burkholderia... Burkholderia... NA 339670 74.7 74.7 27% 3e-12 23.44 886 Q0BDU3.1 RecName: Full=DNA mismatch repair protein MutS [Burkholderia... Burkholderia... NA 398577 74.7 74.7 27% 3e-12 23.44 885 B1YSP3.1 RecName: Full=DNA mismatch repair protein MutS [Xylella... Xylella fast... NA 160492 74.3 74.3 22% 3e-12 25.00 868 Q9PCR2.2 RecName: Full=DNA mismatch repair protein MutS [Saccharophagus... Saccharophag... NA 203122 73.9 73.9 23% 4e-12 24.44 887 Q21LB1.1 RecName: Full=DNA mismatch repair protein MutS [Acinetobacter... Acinetobacte... NA 509173 73.6 73.6 32% 5e-12 23.58 881 B0VAU7.1 RecName: Full=DNA mismatch repair protein MutS [Acinetobacter... Acinetobacte... NA 509170 73.6 73.6 32% 5e-12 23.58 881 B0VUC9.1 RecName: Full=DNA mismatch repair protein MutS [Polaromonas sp... Polaromonas ... NA 296591 72.4 72.4 26% 1e-11 24.91 864 Q127P5.1 RecName: Full=DNA mismatch repair protein MutS [Acinetobacter... Acinetobacte... NA 62977 72.4 72.4 19% 1e-11 26.34 881 Q6FC54.1 RecName: Full=DNA mismatch repair protein MutS [Teredinibacter... Teredinibact... NA 377629 71.6 71.6 24% 2e-11 22.75 864 C5BMR5.1 RecName: Full=DNA mismatch repair protein MSH6; Short=AtMSH6;... Arabidopsis ... thale cress 3702 70.9 70.9 23% 4e-11 25.86 1324 O04716.2 RecName: Full=DNA mismatch repair protein MutS [Methylibium... Methylibium ... NA 420662 67.4 67.4 24% 5e-10 24.17 870 A2SJQ7.1 RecName: Full=DNA mismatch repair protein MutS [Paracidovorax... Paracidovora... NA 397945 65.9 65.9 20% 1e-09 25.79 890 A1TNU7.1 RecName: Full=DNA mismatch repair protein MutS [Variovorax... Variovorax p... NA 543728 63.9 63.9 26% 5e-09 23.83 885 C5CTL8.1 Alignments: >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Clostridium beijerinckii NCIMB 8052] Sequence ID: A6LS00.1 Length: 786 Range 1: 1 to 540 Score:287 bits(735), Expect:6e-83, Method:Compositional matrix adjust., Identities:182/555(33%), Positives:304/555(54%), Gaps:17/555(3%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 + + +L LE+NKI + + +A +K +LEP+ L + N T+E L++ Sbjct 1 MNERSLRILEFNKIKEKIKKYARTNAAKAKVEDLEPYDNLYEINNKLEETNEALEILISK 60 Query 75 NGISLESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLF 133 LE D ++G LSP L ++ LK +++ FFK E+ + YP L Sbjct 61 GNPPLEGLADIHEGIERAKKGGTLSPGQLLKVGGMLKATRNMKEFFKREEVEKS-YPKLE 119 Query 134 NLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQD 193 +L+ L P L ++ +++ + I AS L + R L+ + E++ I++ Sbjct 120 DLAYILAPVKALEDEIERAIVSEDEISDKASQTLCNIRRSLKEKNSSVREKISSIVRSNS 179 Query 194 IRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKA 253 LQDD++ +R YVLP++++ KS + G+ S +G+T FIEP +L ++ + Sbjct 180 --KYLQDDLYTMRGDRYVLPVKSEYKSQVPGLVHDQSSTGATFFIEPMSLVNLNNEIREL 237 Query 254 QNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPR 313 + E +RIL +LS + + LS+ ++L +FD I A+ ++A ++ IKP + Sbjct 238 FLKEKAEIERILSDLSLKVKINGDSCLSNLKVLVEFDFIFAKGRYASALNAIKPIVRE-- 295 Query 314 DLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 + FS+ + +HPL +EN K + +D++L + Q +++GPN GGKTV +KTV Sbjct 296 --DGAFSIFSGRHPL--IENDKVVPSDIYLGEEFQ------TLMITGPNTGGKTVTIKTV 345 Query 374 GIIALMAKAGLFVSC-DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANE 432 G++ +M +GL + D + I ++ IF ++GD Q+ E+ LSTFS H+ I I + ++ Sbjct 346 GLLHIMGLSGLLIPARDNSSIAFFKEIFADIGDEQSIEQSLSTFSSHMTNIVNIMKHVDD 405 Query 433 LSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSM 492 SL L DE GTDPA G A+A S LE + A +I TTH+S LK A N S+ Sbjct 406 KSLALFDELGAGTDPAEGAALAVSILETLRNRGAKLIATTHYSELKAYALKTDGVENASV 465 Query 493 EFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQL 552 EF+ L PTY+LL G+PG+S A E+++R+GL +I++A+ Y E+ + ENL++ELQ Sbjct 466 EFDIETLRPTYRLLIGVPGKSNAFEISKRLGLVEGVIKRAKEYMSEENLQFENLIRELQE 525 Query 553 KRIEINEELTKQNLL 567 K I +E + +L Sbjct 526 KSIIAKKEAREAKML 540 Range 2: 607 to 784 Score:63.9 bits(154), Expect:5e-09, Method:Compositional matrix adjust., Identities:54/215(25%), Positives:96/215(44%), Gaps:41/215(19%) Query 739 IEEQLHDDLDTLQEIEKSTKEKVRSAQQTAKEAQSQGRSPEFWKPGMSAKSTKLKEKGVV 798 +EE+ D+L+E EK K +++G S GM A L +K ++ Sbjct 607 LEEERKKLKDSLEEREKGIH----------KMKENEGESITNVTLGMEAYLPSLNQKVII 656 Query 799 LKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYHN 858 + D++G ++ + GI+K+ + +L T+ K+ Sbjct 657 VSMPDNRGEVQVEAGIMKVNVKLKDLRK-----------------------TQVTKEEKV 693 Query 859 LQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKES 918 + E+ L + + + L G +E+ K D LD + ++ V I+HG G G ++++ Sbjct 694 RRKREVKLNLSNVESRVDLRGLDAEEACYKADKYLDDAYMANLGEVTIVHGKGTGVLRKA 753 Query 919 V----RRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 + +RH SY+L G +GEGGDGVT+VE Sbjct 754 INDMLKRHPHVKSYRL----GAYGEGGDGVTMVEL 784 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Thermomicrobium roseum DSM 5159] Sequence ID: B9KYW4.1 Length: 792 Range 1: 9 to 536 Score:281 bits(719), Expect:1e-80, Method:Compositional matrix adjust., Identities:183/538(34%), Positives:296/538(55%), Gaps:19/538(3%) Query 23 LEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISLESF 82 LE++KI + LA + + + E+ P + + + T E L E ++ F Sbjct 9 LEFDKIRELLAARCQYSVASERAREIAPTADRDQVAYLLRVTREAARLLNERPSFTIGGF 68 Query 83 -DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDLKP 141 D QRG +L+P + +L TL+ S++ F ++ + +YP L + Sbjct 69 RDIRSVVQAAQRGNILAPADVRTVLDTLEAAASLRRQFMADERWSERYPALAEFVLAMVD 128 Query 142 HMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDD 201 L A L +S+ G +L +ASPEL + R L+ A +++E+L + + A+QD Sbjct 129 LPGLRADLARSIGPRGEVLDTASPELAAIRRSLKEAHERLLERLRR--LLAERQEAIQDA 186 Query 202 VWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEE 261 +RDG YV+P+RADR+ + GI VS SG T+F+EP + + + Q E Sbjct 187 YVTIRDGRYVIPVRADRRQAVPGITHDVSGSGQTLFVEPFEVLELNNRWRELQAAETREI 246 Query 262 QRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPR-----DLN 316 +RILR L++ +++L E D +A+ + A + ++PE L+P + + Sbjct 247 ERILRVLTQRIADAADELLQIVEAGAALDLALAKARLAYDLDAVEPELLEPSGPTVPEGH 306 Query 317 P--RFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVG 374 P R L A+HPL L+ + + D+ L + + + V++GPN GGKTVA+KTVG Sbjct 307 PFLRVRLRAARHPL--LDRRTAVPIDVELGERFR------ILVITGPNTGGKTVALKTVG 358 Query 375 IIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANEL 433 ++ALMA+AGLF+ + + + + IFV++GD Q+ E++LSTFS H+ +I +QA+ Sbjct 359 LLALMAQAGLFIPAAPGSGLSVFPAIFVDIGDEQSIEQNLSTFSSHMRRIVATLQQADAS 418 Query 434 SLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSME 493 SL+LLDE GTDP G A+AR+ LE A I+TTH+ LK A N S+E Sbjct 419 SLVLLDEIAAGTDPQEGAALARAILERLLEIGALGIVTTHYPELKVFATGTPGLENASVE 478 Query 494 FEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQ 551 F+P L PTY+LL G+PG+S+A+E+A R+GL ++I +AR GS + +++ L+ E+Q Sbjct 479 FDPVTLSPTYRLLVGLPGRSHALEVARRLGLPEDVIARARELLGSGAPQLDRLIAEMQ 536 Range 2: 614 to 791 Score:54.3 bits(129), Expect:5e-06, Method:Compositional matrix adjust., Identities:52/208(25%), Positives:88/208(42%), Gaps:44/208(21%) Query 757 TKEKVRSAQQTAKEAQSQGRS------PEFWKPGMSAKSTKLKEKGVVLKTADSKGNIEC 810 T++ +R+ ++ + QS GR PE G + T L +G V+ +E Sbjct 614 TQDSLRALEEVKRRVQSSGRQSRQERVPEI-AVGDRVELTALGLEGDVVAIHPESEEVEV 672 Query 811 QFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPP---- 866 + G +++ PQ S + P + + + PP Sbjct 673 RIGQFRVR-------------------QPQASVRRIWP------RREEVSQTFAPPVSVT 707 Query 867 TLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLED- 925 T+ I L G V+E+LD+LD LD+ R + V ++HG G G +++++ L D Sbjct 708 TIPRVEPEIHLRGLHVEEALDRLDRYLDRAVRAGLPWVRVVHGKGTGTLRQAIHAFLRDH 767 Query 926 ---SSYKLRFRGGRHGEGGDGVTIVEFD 950 S++L G H EGG GVT+V + Sbjct 768 PLVKSWEL---AGPH-EGGLGVTVVYLE 791 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Clostridium botulinum B str. Eklund 17B (NRP)] Sequence ID: B2TS45.1 Length: 785 Range 1: 1 to 528 Score:280 bits(716), Expect:3e-80, Method:Compositional matrix adjust., Identities:177/543(33%), Positives:297/543(54%), Gaps:17/543(3%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 + + +L LE+NK+ + L +A +KK EL P+ + N ++E L++ + Sbjct 1 MNKRSLRVLEFNKVKEILKKYAYSSSAKKLVDELVPYDNTYEINNSLEESNEALEILMKK 60 Query 75 NGISLESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLF 133 +E D ++G L+P+ L ++L L +Q FFK E+ + +P L Sbjct 61 GNPPIEGLCDIGDILQRAKKGGTLTPEQLLKVLGMLTATRRMQEFFKREEQEVS-FPKLE 119 Query 134 NLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQD 193 +L+ L P +L ++ +S+ + + +AS L++ R L+ + E+++ I++ Sbjct 120 DLAYILAPINDLEKEIERSILSEDEVSDNASTTLYNIRRSLKEKNSSVREKINSIVRSNS 179 Query 194 IRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKA 253 LQD ++ +R YV+P++A+ KS + G+ S +G+T+FIEP L ++++ Sbjct 180 --KYLQDSLYTIRGDRYVIPVKAEYKSSVPGLVHDQSSTGATLFIEPMGLVNLNNEIKEL 237 Query 254 QNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPR 313 + E R+L LS + E S+ +ILT D I ++ K+A ++ IKP R Sbjct 238 MLKEKAEIDRVLSALSLKVKMNAEHCESNLKILTNLDFIFSKGKYACELNAIKPMV---R 294 Query 314 DLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 D + F++++ +HPL +E K + D+ L + +++GPN GGKTV +KTV Sbjct 295 D-DGIFNIMSGRHPL--IEKDKVVPLDVVLGDEFD------TLMITGPNTGGKTVTLKTV 345 Query 374 GIIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANE 432 G++ +MA +GL + + + + ++ +F ++GD Q+ E+ LSTFS HL I I E N Sbjct 346 GLLHIMALSGLLIPASSNSSVSFFKEVFADIGDEQSIEQSLSTFSSHLTNIVNIMEYDNR 405 Query 433 LSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSM 492 SLIL DE GTDPA G A+A + +E S K A +I TTH+S LK A N R N S+ Sbjct 406 QSLILFDELGGGTDPAEGAALAIAIIENLSSKGAKLIATTHYSELKAYALNKDRVENASV 465 Query 493 EFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQL 552 EF+ + L PTY+LL G+PG+S A E+++R+GL +I A+ Y E+ E L++ LQ Sbjct 466 EFDINTLRPTYRLLIGVPGKSNAFEISKRIGLGKEVIDCAKNYMSKENLEFEGLIRNLQE 525 Query 553 KRI 555 K I Sbjct 526 KSI 528 Range 2: 552 to 784 Score:43.1 bits(100), Expect:0.012, Method:Compositional matrix adjust., Identities:58/261(22%), Positives:111/261(42%), Gaps:43/261(16%) Query 704 DEKAERFRAPKNMSSRSLLDEARMSLQSLKNSFDDIEEQLHDDLDTL-------QEIEKS 756 ++K ER K+ + +EA+ + + K+ D+I + + + L+ L Q +E+ Sbjct 552 EQKLERLEKVKDKAYMEAREEAKKIVANAKDEADEILKAMRE-LEKLGIGSGGRQRLEEE 610 Query 757 TKEKVRSAQQTAKE----AQSQGRSPEFWKPGMSAKSTKLKEKGVVLKTADSKGNIECQF 812 K+ S ++ K ++ G E GM A L + VV+ D++G ++ + Sbjct 611 RKKLKDSLEEKEKNLYKMKENDGEVLEKVALGMEAFLPSLNQTVVVISMPDNRGEVQVEA 670 Query 813 GILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGG 872 GI+KI + +L ++ S + + L +F K N Sbjct 671 GIMKISVKLKDL--------RKTKQSKVEKVKKKRELKLHFSKVEN-------------- 708 Query 873 NTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESV----RRHLEDSSY 928 I L G +E+ ++D LD + ++ V I+HG G G +++++ +RH+ +Y Sbjct 709 -RIDLRGLDAEEACYRVDKYLDDAYMGNLGEVTIVHGKGTGILRKAINDMLKRHVHVKNY 767 Query 929 KLRFRGGRHGEGGDGVTIVEF 949 +L G TIVE Sbjct 768 RLGGYGEGGDG----ATIVEL 784 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Geobacillus sp. WCH70] Sequence ID: C5D5Q8.1 Length: 784 Range 1: 35 to 647 Score:280 bits(715), Expect:4e-80, Method:Compositional matrix adjust., Identities:192/640(30%), Positives:332/640(51%), Gaps:36/640(5%) Query 38 FPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISLESFDFTLFQNFLQRGALL 97 FP S F+E+ W E D + L + GI FD + G L Sbjct 35 FPSSH--FAEVTNWQEETDE----AVAALRLRGHVPLGGI----FDIRASLKRAKIGGTL 84 Query 98 SPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDLKPHMELHAKLNKSVDMDG 157 SP L I T+ ++ F + ++P+L + L E+ + + +D G Sbjct 85 SPHELLDIASTISASRQLKQFIESLHEEKEEFPHLAGYAEKLAALPEVQQAIERCIDDHG 144 Query 158 NILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLPIRAD 217 ++ AS L S R +L + ++ E+L+ I++ Q + L D + +R+ YV+P++ + Sbjct 145 EVMDHASERLRSIRQQLRTTEARVREKLENIIRSQSAQKMLSDAIITIRNDRYVIPVKQE 204 Query 218 RKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVHE 277 + GI S SG+T+FIEPQA+ QL++A+ + E +RIL EL+ E Sbjct 205 YRGVYGGIVHDQSASGATLFIEPQAVVELNNQLQEARVKEKREIERILTELTSIVAEHAE 264 Query 278 DILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPR--FSLINAKHPLFLLENKK 335 +L + +IL Q D I A+ K+A + KP +N R L+ A+HPL ++ Sbjct 265 ALLENVDILAQLDFIFAKAKYANKLKATKPV------MNDRGYIRLLQARHPL--IDQDV 316 Query 336 CIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFV-SCDKAEIQ 394 + ND+ L V++GPN GGKTV +KT+G++ LMA+AGLF+ + D +E+ Sbjct 317 VVPNDIELGKDYT------TIVITGPNTGGKTVTLKTIGLLTLMAQAGLFIPALDGSELA 370 Query 395 DYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMA 454 + +++ ++GD Q+ E+ LSTFS H+ I I + SL+L DE GTDP G A+A Sbjct 371 VFRSVYADIGDEQSIEQSLSTFSSHMVNIVDILRNVDHESLVLFDELGAGTDPQEGAALA 430 Query 455 RSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSY 514 + L+ + A + TTH+ LK N N S+EF+ L PTYKLL GIPG+S Sbjct 431 IAILDEVHGRGARTVATTHYPELKAYGYNRDGVINASVEFDTETLRPTYKLLIGIPGRSN 490 Query 515 AIELAERMGLNNNIIQKARTYYGSESERMENLLKELQ---LKRIEINEELTKQNLLTQKL 571 A E+++R+GL+ II++A+++ +ES ++EN++ L+ + E ++ + + +KL Sbjct 491 AFEISKRLGLDERIIERAKSHISAESNKVENMIASLEQSKKRAEEEEKKAKEARMEAEKL 550 Query 572 DSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNAFENRLE--IRE-RQFEKQKETLLRE 628 S++ + + E+L E R +++E + K + A + E IRE R+ +K+K+ ++E Sbjct 551 RSDW---EQKWEELHEKRDEIIEEAKRKAADIVRASQQEAERIIRELRRMQKEKQAEIKE 607 Query 629 IHEISHKETIENNLEISQAQQNNLSEKNQNKLAPAQKKEI 668 I K+ +E + + ++ ++ Q+ P + ++ Sbjct 608 HELIEAKKRLEEAIPTLEKKKKERKKQTQHAFQPGDEVKV 647 Range 2: 545 to 783 Score:58.9 bits(141), Expect:2e-07, Method:Compositional matrix adjust., Identities:70/265(26%), Positives:112/265(42%), Gaps:68/265(25%) Query 727 MSLQSLKNSFDDIEEQLHDDLD-TLQEIEKSTKEKVRSAQQTA-----------KEAQSQ 774 M + L++ ++ E+LH+ D ++E ++ + VR++QQ A KE Q++ Sbjct 545 MEAEKLRSDWEQKWEELHEKRDEIIEEAKRKAADIVRASQQEAERIIRELRRMQKEKQAE 604 Query 775 GRSPEF----------------------------WKPGMSAKSTKLKEKG-VVLKTADSK 805 + E ++PG K T L +KG +V K +D + Sbjct 605 IKEHELIEAKKRLEEAIPTLEKKKKERKKQTQHAFQPGDEVKVTSLNQKGYLVEKVSDDE 664 Query 806 GNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPL-TKNFKKYHNLQDSEI 864 + Q GILK+KI NE + S+P+ + KPL T K YH Sbjct 665 WQV--QLGILKMKI--------NERDLEYIGSAPKTET---KPLATVKGKDYHV------ 705 Query 865 PPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLE 924 G + L G ++++ +L+ +D RV IIHG G G +++ V+ L+ Sbjct 706 -------GLELDLRGERYEDAIVRLEKYIDDALLAGYPRVSIIHGKGTGALRKGVQEFLK 758 Query 925 DSSYKLRFRGGRHGEGGDGVTIVEF 949 F G EGG GVTIVE Sbjct 759 KHRSVKNFHFGEANEGGTGVTIVEL 783 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Clostridium botulinum E3 str. Alaska E43] Sequence ID: B2V583.1 Length: 785 Range 1: 1 to 528 Score:279 bits(714), Expect:5e-80, Method:Compositional matrix adjust., Identities:177/543(33%), Positives:296/543(54%), Gaps:17/543(3%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 + + +L LE+NK+ + L +A +KK EL P+ + N ++E L++ + Sbjct 1 MNKRSLRVLEFNKVKEMLKKYAYSSSAKKLVDELVPYDNTYEINNRLEESNEALEILMKK 60 Query 75 NGISLESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLF 133 +E D ++G L+P+ L ++L L +Q FFK E + +P L Sbjct 61 GNPPIEGLCDIGDILQRAKKGGTLTPEQLLKVLGMLTATRRMQEFFKREDQEVS-FPKLE 119 Query 134 NLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQD 193 +L+ L P +L ++ +S+ + + +AS L++ R L+ + E+++ I++ Sbjct 120 DLAYILAPINDLEKEIERSILSEDEVSDNASTTLYNIRRSLKEKNSSVREKINSIVRSNS 179 Query 194 IRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKA 253 LQD ++ +R YV+P++A+ KS + G+ S +G+T+FIEP L ++++ Sbjct 180 --KYLQDSLYTIRGDRYVIPVKAEYKSSVPGLVHDQSSTGATLFIEPMGLVNLNNEIKEL 237 Query 254 QNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPR 313 + E R+L LS + E S+ +ILT D I ++ K+A ++ IKP R Sbjct 238 MLKEKAEIDRVLSALSLKVKMNAEHCESNFKILTNLDFIFSKGKYACELNAIKPMV---R 294 Query 314 DLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 D + F++++ +HPL +E K + D+ L + +++GPN GGKTV +KTV Sbjct 295 D-DGIFNIMSGRHPL--IEKDKVVPLDVVLGDEFD------TLMITGPNTGGKTVTLKTV 345 Query 374 GIIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANE 432 G++ +MA +GL + + + + ++ +F ++GD Q+ E+ LSTFS HL I I E N Sbjct 346 GLLHIMALSGLLIPASSNSSVSFFKEVFADIGDEQSIEQSLSTFSSHLTNIVNIMEYDNR 405 Query 433 LSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSM 492 SLIL DE GTDPA G A+A + +E S K A +I TTH+S LK A N R N S+ Sbjct 406 QSLILFDELGGGTDPAEGAALAIAIIENLSSKGAKLIATTHYSELKAYALNKERVENASV 465 Query 493 EFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQL 552 EF+ + L PTY+LL G+PG+S A E+++R+GL +I A+ Y E+ E L++ LQ Sbjct 466 EFDINTLRPTYRLLIGVPGKSNAFEISKRIGLGKEVIDCAKNYMSKENLEFEGLIRNLQE 525 Query 553 KRI 555 K I Sbjct 526 KSI 528 Range 2: 552 to 784 Score:43.1 bits(100), Expect:0.011, Method:Compositional matrix adjust., Identities:58/261(22%), Positives:111/261(42%), Gaps:43/261(16%) Query 704 DEKAERFRAPKNMSSRSLLDEARMSLQSLKNSFDDIEEQLHDDLDTL-------QEIEKS 756 ++K ER K+ + +EA+ + + K+ D+I + + + L+ L Q +E+ Sbjct 552 EQKLERLEKVKDKAYMDAREEAKKIVANAKDEADEILKAMRE-LEKLGIGSGGRQRLEEE 610 Query 757 TKEKVRSAQQTAKE----AQSQGRSPEFWKPGMSAKSTKLKEKGVVLKTADSKGNIECQF 812 K+ S ++ K ++ G E GM A L + VV+ D++G ++ + Sbjct 611 RKKLKDSLEEKEKNLYKMKENDGEVLEKVALGMEAFLPSLNQTVVVISMPDNRGEVQVEA 670 Query 813 GILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGG 872 GI+KI + +L ++ S + + L +F K N Sbjct 671 GIMKISVKLKDL--------RKTKQSKVEKVKKKRELKLHFSKVEN-------------- 708 Query 873 NTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESV----RRHLEDSSY 928 I L G +E+ ++D LD + ++ V I+HG G G +++++ +RH+ +Y Sbjct 709 -RIDLRGLDAEEACYRVDKYLDDAYMGNLGEVTIVHGKGTGILRKAINDMLKRHVHVKNY 767 Query 929 KLRFRGGRHGEGGDGVTIVEF 949 +L G TIVE Sbjct 768 RLGGYGEGGDG----ATIVEL 784 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Lactiplantibacillus plantarum WCFS1] Sequence ID: Q88V16.1 Length: 787 Range 1: 6 to 571 Score:278 bits(712), Expect:1e-79, Method:Compositional matrix adjust., Identities:184/579(32%), Positives:307/579(53%), Gaps:24/579(4%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISL 79 L LE+ ++ Q LA + ++ +EL P + D T++ ++ GI + Sbjct 6 LNTLEYQQVKQQLAPYLVSATGQQALNELHPMTSVADIQRALDETNDGAEVYRLKGGIPV 65 Query 80 ESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFK--YEKSRATKYPNLFNLS 136 D L GA L+ L Q+ L+ +I FF E + +LF+ Sbjct 66 ARLADIKPHMKRLAIGATLNGSELGQVGRVLRTTRAITRFFAELLEDAPENDIRHLFDEV 125 Query 137 NDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRN 196 +L ++ +L +++ DG+I ASPEL RS + + +I Q+ + D + Sbjct 126 AELVTLPDVTKRLATAIEGDGHITDEASPELSRIRSNIRRTETEIRNQMGHYTRGHDAK- 184 Query 197 ALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQND 256 L D + +R+ YV+P++A+ +S GI S SG T+FIEPQA+ +L + Q Sbjct 185 YLSDPIITIRNDRYVIPVKAENRSRFGGIVHDQSASGQTLFIEPQAVMAMNDRLRQNQVA 244 Query 257 VEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLN 316 + EEQRIL ELS ++I++++ IL FD I A+ ++A + +P + P++ Sbjct 245 EKQEEQRILEELSNLIAPYQDEIINNAAILGHFDFINAKARYAHDMKATEPA-VSPQN-- 301 Query 317 PRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGII 376 L A+HPL ++ +K +AND+ L Q V++GPN GGKT+ +KT+G++ Sbjct 302 -EVYLRQARHPL--IDPRKVVANDISLGTDYQA------MVITGPNTGGKTITLKTLGLL 352 Query 377 ALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSL 435 LMA++GLF+ + + + Y IF ++GD Q+ E++LSTFS H+ I+ Q + SL Sbjct 353 QLMAQSGLFIPVEAGSRVGVYNEIFADIGDEQSIEQNLSTFSSHMENIESFLAQIDAHSL 412 Query 436 ILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFE 495 +L+DE GTDP G A+A + L+ K V+ TTH+ LK N N SMEF+ Sbjct 413 VLVDELGAGTDPQEGAALAIAILDAIGAKGTQVVATTHYPELKAYGFNRPDTINASMEFD 472 Query 496 PHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRI 555 L PTY+LL GIPG+S A+++A+R+G+ I+ +AR+ ++S+ + ++ +L KR Sbjct 473 EETLKPTYRLLVGIPGRSNALDIAQRLGIPQAIVDQARSLTDTDSQDLNAMIADLVTKRK 532 Query 556 EINEE-------LTKQNLLTQKLDSEFKSLKNEKEQLSE 587 ++ +E + L ++L SEF + + K+QL E Sbjct 533 QVEDEQLHLKTQVADSEKLHRQLKSEFNAYQQRKDQLIE 571 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Staphylococcus epidermidis ATCC 12228] Sequence ID: Q8CPL6.1 Length: 782 Range 1: 1 to 583 Score:277 bits(709), Expect:3e-79, Method:Compositional matrix adjust., Identities:176/596(30%), Positives:314/596(52%), Gaps:17/596(2%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 +RQ L LE+ KI ++A ++ E+ P + F T E+ + + Sbjct 1 MRQKTLDVLEFEKIKSFVADETISDLGREKVQEMAPASNFDTVEFQMNETDEISQIYNKH 60 Query 75 NGISLESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFK--YEKSRATKYPN 131 SL + + G +L+ L +I +++ + ++F+ E+ KYP Sbjct 61 RLPSLSGLAKVSPLVHRASIGGVLNVGELNRIKRLVQVQNQFKTFYNQMLEEDEEVKYPI 120 Query 132 LFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKK 191 L + N L +L ++N+ D ++ AS L S RS++ ++I + LD I+K Sbjct 121 LHDKMNHLPILTDLFKEINEKCDAH-DLFDHASYTLQSIRSKISRTNQRIRQNLDRIVKN 179 Query 192 QDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLE 251 Q + L D + +R+ V+P++A+ + GI S SG T++IEP ++ Q+ Sbjct 180 QGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLYIEPNSVVEMNNQIS 239 Query 252 KAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLK 311 + +ND VE +RIL EL+ + +L + ++ Q D +IA+ ++A I G KP F + Sbjct 240 RLRNDEAVERERILTELTGLVSAESDALLVAESVMGQIDFLIAKARYARTIKGTKPTFKE 299 Query 312 PRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMK 371 R + L NA HPL L+ +AN + + +++GPN GGKTV +K Sbjct 300 ERTI----YLPNAFHPL--LDKDTVVANTIEFIDDVE------TVIITGPNTGGKTVTLK 347 Query 372 TVGIIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQA 430 T+G+I +MA++GL + + D +++ +EN++ ++GD Q+ E+ LSTFS H+ I I + A Sbjct 348 TLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDA 407 Query 431 NELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNG 490 ++ SLIL DE GTDP+ G A+A S L+Y + V+ TTH+ LK + N N Sbjct 408 DQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLVMATTHYPELKAYSYNREGVMNA 467 Query 491 SMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKEL 550 S+EF+ L PTYKLL G+PG+S A ++++++GL+ NII KA+T G++ + + +++ L Sbjct 468 SVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAKTMIGTDEQEINAMIESL 527 Query 551 QLKRIEINEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNA 606 + ++++ + + L ++ +L + +Q L+E + K +R+ + Sbjct 528 EHNSKRVDQQRIELDRLVREAQETHDALSKQYQQYQNYEKSLMEEAKEKANQRVKS 583 Range 2: 567 to 781 Score:57.0 bits(136), Expect:7e-07, Method:Compositional matrix adjust., Identities:64/243(26%), Positives:108/243(44%), Gaps:40/243(16%) Query 719 RSLLDEAR----MSLQSLKNSFDDIEEQLHDDLD----TLQEIEKSTKEKVRSAQQTAKE 770 +SL++EA+ ++S D+I ++L + D ++E E K+K Q AK Sbjct 567 KSLMEEAKEKANQRVKSATKEADEILKELRNLRDHKGAEVKEHELIDKKKQLDDQYEAKS 626 Query 771 AQS--QGRSPEFWKPGMSAKSTKLKEKGVVLKTADSKGNIEC--QFGILKIKIPYHELIP 826 + Q + + G K +KG VL+ GN E Q GI+K+K+P +L Sbjct 627 IKQHVQKKKYDTIHAGDEVKVLSYGQKGEVLELV---GNEEAVVQMGIIKMKLPIEDLEK 683 Query 827 GNETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESL 886 + K +++ +K + L G +E+L Sbjct 684 TKKKKEKPTKMVTRQNRQTIK-------------------------TELDLRGYRYEEAL 718 Query 887 DKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTI 946 ++LD LD+ + ++V IIHG G G +++ V++HL+ +FRGG EGG GVT+ Sbjct 719 NELDQYLDQAVLSNYEQVYIIHGKGTGALQKGVQQHLKKHKSVRQFRGGMPNEGGFGVTV 778 Query 947 VEF 949 E Sbjct 779 AEL 781 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Staphylococcus haemolyticus JCSC1435] Sequence ID: Q4L5E9.1 Length: 783 Range 1: 1 to 631 Score:277 bits(708), Expect:3e-79, Method:Compositional matrix adjust., Identities:185/646(29%), Positives:336/646(52%), Gaps:25/646(3%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 +RQ L LE++KI ++A ++ S++ P + E F T E+ + + Sbjct 1 MRQKTLDVLEFDKIKSFVASETISDLGREKVSKMSPATDFETVEFQMNETDEISQIYNKH 60 Query 75 NGISLESFDFTLFQNFLQR---GALLSPQALYQILITLKLCHSIQSFFKY---EKSRATK 128 SL + R G +L+ L + +++ + ++F+ E + K Sbjct 61 RLPSLSGL--AKISPLIHRANIGGVLNVTELNLVKRLIQVQNQFKTFYNQLLEEDEQVVK 118 Query 129 YPNLFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEI 188 YP L + N L +L ++N+ D ++ SAS EL RS++ ++I + LD I Sbjct 119 YPILNDKMNQLPILSDLFQEINEKCDTH-DLYDSASYELQGIRSKISSTNQRIRQNLDRI 177 Query 189 LKKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQA 248 +K Q + L D + +R+ V+P++A+ + +GI S SG T++IEP ++ Sbjct 178 VKSQANQKKLSDAIITVRNDRNVIPVKAEYRQDFKGIVHDQSASGQTLYIEPSSIVEMNN 237 Query 249 QLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPE 308 Q+ + +ND VE +RIL EL+ + L + ++ Q D + A+ ++A I G KP Sbjct 238 QISRLRNDEAVERERILTELTGMVAAEADGCLIAESVMGQIDFLTAKARYARSIKGTKPT 297 Query 309 FLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTV 368 F K R + L NA HPL L +AN + + +++GPN GGKTV Sbjct 298 FYKDRTV----YLPNAYHPL--LNKDTVVANTIEFVDDIE------TVIITGPNTGGKTV 345 Query 369 AMKTVGIIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRIS 427 +KT+G+I +MA++GL + + D +++ +EN++ ++GD Q+ E+ LSTFS H+ I I Sbjct 346 TLKTLGLIIIMAQSGLLIPTLDGSQLSVFENVYCDIGDEQSIEQSLSTFSSHMKNIVEIL 405 Query 428 EQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRF 487 ++ ++ SL+L DE GTDP+ G A+A S L++ + V+ TTH+ LK + N Sbjct 406 QETDKNSLVLFDELGAGTDPSEGAALAMSILDHVREIGSLVMATTHYPELKAYSYNREGV 465 Query 488 FNGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLL 547 N S+EF+ + L PTYKLL G+PG+S A +++ ++GL+ II KA+T G++ + + +++ Sbjct 466 MNASVEFDVNTLSPTYKLLMGVPGRSNAFDISRKLGLSLGIINKAKTMIGTDEQEINSMI 525 Query 548 KELQLKRIEINEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNAF 607 + L+ ++E+ + + L ++ L+++ EQ L++ + K +R+ + Sbjct 526 ESLEKNSKRVDEQRIELDRLLKEARKTHDDLEHQYEQYKSYEKKLMDEAKEKANQRVKSA 585 Query 608 ENRLE--IRE-RQFEKQKETLLREIHEISHKETIENNLEISQAQQN 650 + ++E R QK ++E I K+ +++ E +QN Sbjct 586 TKEADSILKELRTLRDQKGADVKEHELIDKKKQLDDQYEAKSLKQN 631 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Staphylococcus epidermidis RP62A] Sequence ID: Q5HQ30.1 Length: 782 Range 1: 1 to 583 Score:277 bits(708), Expect:3e-79, Method:Compositional matrix adjust., Identities:175/596(29%), Positives:315/596(52%), Gaps:17/596(2%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 +RQ L LE+ KI ++A ++ E+ P + F T E+ + + Sbjct 1 MRQKTLDVLEFEKIKSFVADETISDLGREKVQEMAPASNFDTVEFQMNETDEISQIYNKH 60 Query 75 NGISLESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFK--YEKSRATKYPN 131 SL + + G +L+ L +I +++ + ++F+ E+ KYP Sbjct 61 RLPSLSGLAKVSPLVHRASIGGVLNVAELNRIKRLVQVQNQFKTFYNQMLEEDEEVKYPI 120 Query 132 LFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKK 191 L + N L +L ++N++ D ++ AS L S RS++ ++I + LD I+K Sbjct 121 LHDKMNHLPILTDLFKEINETCDAH-DLFDHASYTLQSIRSKISRTNQRIRQNLDRIVKN 179 Query 192 QDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLE 251 Q + L D + +R+ V+P++A+ + GI S SG T++IEP ++ Q+ Sbjct 180 QGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLYIEPNSVVEMNNQIS 239 Query 252 KAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLK 311 + +ND VE +RIL EL+ + +L + ++ Q D +IA+ ++A I G KP F + Sbjct 240 RLRNDEAVERERILTELTGFVSAEADALLIAESVMGQIDFLIAKARYARTIKGTKPTFKE 299 Query 312 PRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMK 371 R + L NA HPL L+ +AN + + +++GPN GGKTV +K Sbjct 300 DRTI----YLPNAFHPL--LDKDTVVANTIEFIDDVE------TVIITGPNTGGKTVTLK 347 Query 372 TVGIIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQA 430 T+G+I +MA++GL + + D +++ +EN++ ++GD Q+ E+ LSTFS H+ I I + A Sbjct 348 TLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDA 407 Query 431 NELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNG 490 ++ SLIL DE GTDP+ G A+A S L+Y + V+ TTH+ LK + N N Sbjct 408 DQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLVMATTHYPELKAYSYNREGVMNA 467 Query 491 SMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKEL 550 S+EF+ L PTYKLL G+PG+S A ++++++GL+ NII KA+T G++ + + +++ L Sbjct 468 SVEFDVETLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAKTMIGTDEQEINAMIESL 527 Query 551 QLKRIEINEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNA 606 + ++++ + + L ++ +L + +Q L++ + K +R+ + Sbjct 528 EQNSKRVDQQRIELDRLVREAQQTHDALSKQYQQYQNYETSLMDEAKEKANQRVKS 583 Range 2: 564 to 781 Score:57.8 bits(138), Expect:3e-07, Method:Compositional matrix adjust., Identities:64/255(25%), Positives:114/255(44%), Gaps:41/255(16%) Query 699 NYQS--LDEKAERFRAPKNMSSRSLLDEARMSLQSLKNSFD--DIEEQLHDDLDTLQEIE 754 NY++ +DE E+ N +S EA L+ L+N D E + H+ +D ++++ Sbjct 564 NYETSLMDEAKEK----ANQRVKSATKEADEILKELRNLRDHKGAEVKEHELIDKKKQLD 619 Query 755 KSTKEKVRSAQQTAKEAQSQGRSPEFWKPGMSAKSTKLKEKGVVLKTADSKGNIECQFGI 814 + +V+S +Q Q + + G K +KG VL+ + + Q GI Sbjct 620 D--QYEVKSIKQ-----HVQKKKYDTIHTGDEVKVLSYGQKGEVLELVGDEEAV-VQMGI 671 Query 815 LKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNT 874 +K+K+P +L + K +++ +K Sbjct 672 IKMKLPIEDLEKTKKKKEKPTKMVTRQNRQTIK-------------------------TE 706 Query 875 IQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRG 934 + L G +E+L++LD LD+ + ++V IIHG G G +++ V++HL+ +FRG Sbjct 707 LDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTGALQKGVQQHLKKHKSVRQFRG 766 Query 935 GRHGEGGDGVTIVEF 949 G EGG GVT+ E Sbjct 767 GMPSEGGFGVTVAEL 781 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Levilactobacillus brevis ATCC 367] Sequence ID: Q03R49.1 Length: 787 Range 1: 1 to 567 Score:276 bits(707), Expect:6e-79, Method:Compositional matrix adjust., Identities:184/582(32%), Positives:304/582(52%), Gaps:26/582(4%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 + Q L +E+ +I Q L G+ + +EL P + + + + + D+ Sbjct 1 MNQKTLKIMEYERIKQALRGYLVSAAGQHELAELAPTADAKQLQIWLDESRDGADIYRLE 60 Query 75 NGISLESFDFTLFQNFLQRGAL---LSPQALYQILITLKLCHSIQSFFKYEKSRATKYPN 131 NGI L D + L R A+ L+ L QI L S+ FF+ + Sbjct 61 NGIPLPKLDD--IRPHLHRLAMEAALNGLELAQISRVLWTTSSVVKFFRDLTEKEITLRR 118 Query 132 LFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKK 191 L + +L ++ +L S++ DG+I ASP L R + + I + +D+ + Sbjct 119 LDRVVKELVTLPDVTRRLRTSLEGDGHITDEASPALRQIRQHIAQTEVAIRQTMDQYTRG 178 Query 192 QDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLE 251 +D + L + + +RD YV+P+RA+ K GI S SG T+FIEPQA+ +L Sbjct 179 KDAKY-LSETIVTIRDERYVIPVRAEYKQRFGGIVHDQSASGQTLFIEPQAVVGLNNRLR 237 Query 252 KAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLK 311 + Q D EEQRIL EL+ +IL +SEIL FD I A+ K+A + +P+ + Sbjct 238 QNQIDERHEEQRILAELTALLDPYQAEILRNSEILGHFDFINAKAKYAHQLKATEPKLSE 297 Query 312 PRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMK 371 +N R A+HPL ++ KK +AND+ + + +++GPN GGKT+ +K Sbjct 298 DNQVNLR----QARHPL--IDPKKVVANDITIGRDYK------TIIVTGPNTGGKTITLK 345 Query 372 TVGIIALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQA 430 T+ ++ LM ++GLF+ ++ + I +++IF ++GD Q+ E+ LSTFSGH+ I I QA Sbjct 346 TLALVQLMGQSGLFIPANENSVIGIFDDIFADIGDEQSIEQSLSTFSGHMENIVAILRQA 405 Query 431 NELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNG 490 +E SLI++DE GTDP G A+A + L+ + V+ +TH+ LK N N Sbjct 406 DERSLIVVDELGAGTDPQEGAALAIAILDQMGTLGSYVMASTHYPELKAYGYNRPETINA 465 Query 491 SMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKEL 550 SMEF+ L PTY LL GIPG+S A+++A R+G+ ++ AR +S+ + ++ +L Sbjct 466 SMEFDGETLQPTYHLLIGIPGRSNALDIAARLGMPEQVVAAARGLTDQDSQDLNAMISDL 525 Query 551 --QLKRIEINEELTKQNL-----LTQKLDSEFKSLKNEKEQL 585 Q + + + E +Q L L +L +F + +++K+QL Sbjct 526 TEQKRHADADAERLRQELAEADELHAQLKKQFDAYQHQKDQL 567 Range 2: 656 to 786 Score:43.9 bits(102), Expect:0.007, Method:Compositional matrix adjust., Identities:41/154(27%), Positives:68/154(44%), Gaps:23/154(14%) Query 796 GVVLKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKK 855 GV+++ D + + E Q GILK+KI ++L + + P KS+ + K Sbjct 656 GVLMEQLDDQ-HWEVQLGILKMKIATNDL---------EKAQDPAKSAKQPRASVKRSGS 705 Query 856 YHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKI 915 S + TL L G +E++ ++D +D V IIHG G G + Sbjct 706 ------SGMSATLD-------LRGHRYEEAMAEVDRYIDSALLAGYPSVTIIHGKGTGAL 752 Query 916 KESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 ++ V +L+ ++ F GGDG T+V F Sbjct 753 RKGVTDYLKRNNRIKSFGFSPANAGGDGSTVVHF 786 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Staphylococcus carnosus subsp. carnosus TM300] Sequence ID: B9DPU2.1 Length: 782 Range 1: 1 to 569 Score:274 bits(700), Expect:4e-78, Method:Compositional matrix adjust., Identities:177/584(30%), Positives:317/584(54%), Gaps:28/584(4%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 +RQ L L+++KI + A + + + P + E F T E+ + + Sbjct 1 MRQKTLDVLDFDKIKAQVENEAVSDLGRVKAAAMTPASDYETVVFQMNETDELSQIYNKH 60 Query 75 NGISLESFDFTLFQNFLQR---GALLSPQALYQILITLKLCHSIQSFFK--YEKSRATKY 129 SL T + + R G++L+ + L QI +++ + ++F+ E+ A Y Sbjct 61 RLPSLSGL--TEVKPLIHRAKIGSILNVRELNQIKRLIQVQNQYKTFYSQLLEEEEAINY 118 Query 130 PNLFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEIL 189 P L L +L+ ++++ D ++ AS EL S RSR+ ++I + LD I+ Sbjct 119 PILDERMAQLPILTDLYQEIHQKCDA-YDLFDDASHELQSIRSRIHSTSQRIKQNLDRIV 177 Query 190 KKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQ 249 K Q + L D + +R+ +V+P++A+ + GI S SG T++IEP A+ + Sbjct 178 KSQSNQKKLSDAIITVRNDRHVIPVKAEYRQDFNGIVHDQSSSGQTLYIEPSAVVEMNNK 237 Query 250 LEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEF 309 + + +ND +VE +RIL LS + + L + ++ Q D + A+ ++ I G KPEF Sbjct 238 ISRLRNDEKVEVERILSVLSGEVAAEADACLIAESVMGQIDFLTAKARYGQSIKGTKPEF 297 Query 310 LKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVA 369 + R++ L A HPL L+ +AN + A Q +++GPN GGKTV Sbjct 298 TEERNV----YLPKAFHPL--LDRATVVANTIEFAEDIQ------TVIITGPNTGGKTVT 345 Query 370 MKTVGIIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISE 428 +KT+G+I +MA++GL + + D +++ ++N++ ++GD Q+ E+ LSTFS H+ I I + Sbjct 346 LKTLGLIIVMAQSGLLIPALDGSKLSVFDNVYCDIGDEQSIEQSLSTFSSHMKNIVEILK 405 Query 429 QANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFF 488 A+ SLIL DE GTDP+ G A+A S L++ + V+ TTH+ LK + N Sbjct 406 HADHNSLILFDELGAGTDPSEGAALAMSILDHVQKLGSLVMATTHYPELKAYSYNREGVM 465 Query 489 NGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLL- 547 N S+EF+ + L PTYKLL G+PG+S A E++ ++GL+ NII++A++ G + + + N++ Sbjct 466 NASVEFDVNILSPTYKLLMGVPGRSNAFEISSKLGLSGNIIREAKSLIGQDEQEINNMIA 525 Query 548 ------KELQLKRIEINEELTKQNLLTQKLDSEFKSLKNEKEQL 585 K+++ +RIE++ L + + L+ +++ +N ++QL Sbjct 526 SLETNAKKVEDQRIELDRLLREAKQVHGDLNKKYEQYQNYEKQL 569 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Clostridioides difficile 630] Sequence ID: Q189Q3.1 Length: 792 Range 1: 1 to 556 Score:272 bits(695), Expect:2e-77, Method:Compositional matrix adjust., Identities:179/574(31%), Positives:304/574(52%), Gaps:22/574(3%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 + + +L LE+NKI L A+ K L P + + TSE + + Sbjct 1 MNEKSLRVLEYNKIIDLLKKKASSSLGLKYIENLVPNTDFVEVKSMLEETSEAQSIIIKR 60 Query 75 NGISLESFDFTLFQNFLQR---GALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPN 131 + LE ++ ++R GA L P +L I TL++ +++ YP Sbjct 61 GSVGLEGIHD--IEDKVKRAYIGASLDPGSLIMIADTLRVARRLRNSLSSSDEEDFNYPI 118 Query 132 LFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKK 191 + +LSN L + ++ ++ ++ + I +AS L R R+ + I +L+ I+ Sbjct 119 IQSLSNSLYVYKDIEDQIYNAIISEVEISDNASSILRDIRRRIAQKNQSIRSKLNSIISS 178 Query 192 QDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLE 251 + LQD + LR +V+P++++ +S + GI S SG+T+FIEP + +L Sbjct 179 TTYQKYLQDAIISLRGDRFVVPVKSEYRSQVAGIVHDQSSSGATLFIEPMTIVEMNNELR 238 Query 252 KAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLK 311 + + + E +RIL ELS V ED++S+ EIL + D ++ K + + GI+P + Sbjct 239 QLKLGEQEEIERILSELSAMVGEVSEDLISNQEILGRLDFAFSKGKLSIQMRGIEPTLNE 298 Query 312 PRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMK 371 + LN + N +HPL L+ KK +AN ++L + V++GPN GGKTV +K Sbjct 299 DKYLNIK----NGRHPL--LDKKKVVANTIYLG------RDFHTLVITGPNTGGKTVTIK 346 Query 372 TVGIIALMAKAGLFVSCD-KAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQA 430 TVG+ ALM ++GL + D + + Y+N+F ++GD Q+ E+ LSTFS H+ I I + Sbjct 347 TVGLFALMTQSGLHIPADYGSSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILQNV 406 Query 431 NELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNG 490 SL++ DE GTDP G A+A + LE + A I TTH+S LK A S N Sbjct 407 TADSLVIFDELGAGTDPVEGAALAIAVLEDINSVGAKCIATTHYSELKNYALTKSGVENA 466 Query 491 SMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKEL 550 ++EF+ L PTYKLL G+PG+S A E++ ++GL++ +I +A+ Y +E+ +E++L+ + Sbjct 467 AVEFDIETLSPTYKLLIGVPGKSNAFEISRKLGLSDYVISRAKEYINTENIALEDVLQNV 526 Query 551 QLKRIEINEELTKQNLLTQKLDSEFKSLKNEKEQ 584 + RI+ E+ + ++L E + LK E ++ Sbjct 527 EKNRIKAVEDREE----AERLKEEIEKLKVEYDE 556 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Latilactobacillus sakei subsp. sakei 23K] Sequence ID: Q38YN3.1 Length: 787 Range 1: 6 to 629 Score:271 bits(692), Expect:7e-77, Method:Compositional matrix adjust., Identities:185/653(28%), Positives:339/653(51%), Gaps:44/653(6%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISL 79 L LE++KI Q L G+A ++ + LEP E + T + +D+ GI L Sbjct 6 LKTLEYDKIKQMLQGYAITAFGQEQIATLEPINEADLIQIRLNQTKDGVDIERLKGGIPL 65 Query 80 ESFDFTLFQNFLQR---GALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLS 136 + + L+R GA+L+ L QI L+ ++ FF + + L L Sbjct 66 PQLEN--IRPHLKRIEIGAMLNGSELAQIGRVLRATSAVVRFFDDLEKDELELKALPELV 123 Query 137 NDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRN 196 +L ++ SV DG IL +AS +L R+ L+ + +I ++ + Sbjct 124 AQFVTLPQLTERIRSSVADDGAILDTASTKLRGLRTGLKQLEGQIRSRMASYTHGAKAK- 182 Query 197 ALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQND 256 L D + +R+ YV+P++ + + G+ S SG T+F+EPQA+ +L + Q + Sbjct 183 YLSDPIVTIRNDRYVIPVKQEYRGQFGGVVHDQSASGQTLFMEPQAIMELNNRLRQLQIE 242 Query 257 VEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLN 316 + E +RIL ELS+ +IL+++E+L Q D + A+ + A + +P + Sbjct 243 EQQEIERILAELSEAIMPERHNILANAELLGQLDFVNAKAQLAKALKATEPLI----NAE 298 Query 317 PRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGII 376 L A+HPL ++ K +AND+ + Q V++GPN GGKT+ +KT+G++ Sbjct 299 NHVDLKQARHPL--IDATKVVANDIAIGADYQA------IVVTGPNTGGKTITLKTLGLV 350 Query 377 ALMAKAGLFVSC-DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSL 435 +MA++GLF++ +++++ + +IF ++GD Q+ E++LSTFS H+ I +I +Q ++ SL Sbjct 351 QVMAQSGLFITAREESQVGVFSDIFADIGDEQSIEQNLSTFSAHMENIIQILKQIDDRSL 410 Query 436 ILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFE 495 +LLDE GTDP G A+A + L+ + A V+ +TH+ LK N + N SMEF+ Sbjct 411 VLLDELGAGTDPQEGAALAIAILDQIGIVGANVVASTHYPELKIYGYNRPQTINASMEFD 470 Query 496 PHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRI 555 L PTY+LL G+PG+S A +++ R+GL N+I+ +A+ ES+ + N++ +L+ +R Sbjct 471 VATLQPTYRLLIGVPGRSNAFDISTRLGLPNSIVDQAKQLMNDESQDLNNMITDLENQR- 529 Query 556 EINEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYR----------NKLQKRLN 605 + ++E+++L++E + ++L L Y+ K +++ N Sbjct 530 -------------KAAETEYQALRHELTEATDLHQQLSTAYQQFFEDRETEMTKAKEKAN 576 Query 606 AFENRLEIR-ERQFEKQKETLLREIHEISHKETIENNLEISQAQQNNLSEKNQ 657 A + E++ ++ K ++ + + +I + I+ E+ Q Q +KN+ Sbjct 577 AIVEKAEVKADKVITKLRDMQMNQGAQIKENQLIDAKAELGQLHQETTLKKNK 629 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Geobacillus thermodenitrificans NG80-2] Sequence ID: A4IRL1.1 Length: 784 Range 1: 1 to 605 Score:270 bits(690), Expect:1e-76, Method:Compositional matrix adjust., Identities:188/627(30%), Positives:322/627(51%), Gaps:39/627(6%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 ++Q L LE++K+ + LA A+ + + L P +L++ + T E + Sbjct 1 MQQKMLRILEFDKVKEQLAEHASSALGLEKIAALVPSSDLDEVAVWLEETDEAAAVLRLR 60 Query 75 NGISLESFDFTLFQNFLQR---GALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPN 131 + L+ ++ L+R G +LSP L ++ T ++ Sbjct 61 GYVPLDGV--VDIRSHLKRAAIGGVLSPIELLEVAATAAASRQMKQLIMSLHDEHGGLAR 118 Query 132 LFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKK 191 L + +++L L + +S+D G +L +AS L S R ++ A+ +I E+L+ I++ Sbjct 119 LADYADELAEVPALEEDIRRSIDDHGEVLDTASDRLRSLRGQIRAAEARIREKLESIIRS 178 Query 192 QDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLE 251 + L D + +R+ YV+P++ + +S GI S SG+T+FIEPQ + L Sbjct 179 PSAQKRLSDAIITIRNDRYVIPVKQEYRSAYGGIVHDQSASGATLFIEPQVVVELNNALR 238 Query 252 KAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLK 311 +A+ + E +RILRELS E + + E L FD + A+ K+A + KP Sbjct 239 EARAKEKQEIERILRELSAKVAEHDEPLKRAVEALAHFDFLFAKAKYARRLQAAKPA--- 295 Query 312 PRDLNPR--FSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVA 369 +N R + A+HPL ++ K + ND+ L G+ + V++GPN GGKTV Sbjct 296 ---VNNRGYLRFLQARHPL--IDQDKAVPNDIVLG----GDYT--TIVITGPNTGGKTVT 344 Query 370 MKTVGIIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISE 428 +KTVG++ +MA+AGLF+ + D +E + ++F ++GD Q+ E+ LSTFS H+ I I Sbjct 345 LKTVGLLTIMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNIVDILR 404 Query 429 QANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFF 488 +E SL+L DE GTDP G A+A + L+ + A + TTH+ LK N Sbjct 405 HVDEESLVLFDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRPGVV 464 Query 489 NGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLK 548 N S+EF+ L PTYKLL GIPG+S A +++ R+GL+ II++A+ +ES +EN++ Sbjct 465 NASVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERAKVQVSAESHSVENMIA 524 Query 549 ELQLKRIEINEELTKQN-------LLTQKLDSEFKSLKNEK-EQLSEL---RGDLVENYR 597 L+ + + E+ + + L + + + + L+++K EQL+E D++ Sbjct 525 SLERSKKQAEEDEARAHSAREEAERLRAEWEQKLEELEDKKAEQLAEAAQKATDIIRAAE 584 Query 598 NKLQKRLNAFENRLEIRERQFEKQKET 624 + ++ +N E+R Q EKQ E Sbjct 585 REAERIIN------ELRRLQKEKQAEV 605 Range 2: 639 to 783 Score:54.3 bits(129), Expect:5e-06, Method:Compositional matrix adjust., Identities:48/169(28%), Positives:76/169(44%), Gaps:24/169(14%) Query 781 WKPGMSAKSTKLKEKGVVLKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQ 840 ++ G K T L +KG +L+ S+ + Q GILK+KI +L + S+P Sbjct 639 FQSGDEVKVTSLNQKGYLLEKV-SEDEWQVQLGILKMKIHERDL--------EYIGSAPA 689 Query 841 KSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMD 900 K V P+ + + H + L G +++L +L+ +D Sbjct 690 K---EVTPI------------ATVKGKDAHVSLELDLRGERYEDALVRLEKYIDDAVLAG 734 Query 901 VDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 RV IIHG G G +++ V++ L+ FR G EGG GVT+VE Sbjct 735 YPRVSIIHGKGTGALRQGVQQFLKQHRAVKSFRFGAANEGGTGVTVVEL 783 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Pelotomaculum thermopropionicum SI] Sequence ID: A5D0W6.1 Length: 785 Range 1: 5 to 553 Score:270 bits(689), Expect:1e-76, Method:Compositional matrix adjust., Identities:187/584(32%), Positives:295/584(50%), Gaps:52/584(8%) Query 19 ALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGIS 78 AL RLE++K+ + LA + ++ +EP L+ TSE L + Sbjct 5 ALKRLEYHKVLEQLAACSGSSLGREKIMAMEPLDNLQAILRKQEETSEGRKL------LR 58 Query 79 LESF-------DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPN 131 LE F D +GA+L P+ L + TL +I+ FF+ R +YP Sbjct 59 LEPFAEAGGWKDIRAQLRKAGQGAILDPEELLAVADTLTAGRTIRKFFQ---DRQEQYPL 115 Query 132 LFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKK 191 L+ +S+ L EL K+ ++ G + ASPEL R RL A+ ++ E L+ I++ Sbjct 116 LYEVSSALVSLPELERKIKNAILPGGEVADGASPELAQIRRRLAAAQAQVKEHLEHIIRS 175 Query 192 QDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLE 251 + LQ+ + +R+G YV+P++ + +S + GI S SG+T+FIEP A+ + +L Sbjct 176 PSYQKYLQEPIVTIREGRYVVPVKIEHRSQVPGIVHDQSASGATLFIEPMAVVEKNNELR 235 Query 252 KAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLK 311 + + E QRIL ELS I +S E L + D I+AR +++ + P Sbjct 236 RLMAAEKREIQRILAELSAGVAQHAGPIGASLEALGELDFIMARARYSQKLDAWAP---- 291 Query 312 PRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPY---------VWVLSGPN 362 LLE + C+ P QGE P V++GPN Sbjct 292 ------------------LLEGEACMDIRRGRHPLLQGEVVPIDIRLGADFDTLVITGPN 333 Query 363 AGGKTVAMKTVGIIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLA 421 GGKTVA+KT G++ LMA++GL + + + + + + +F ++GD Q+ E+ LSTFS H+ Sbjct 334 TGGKTVALKTAGLLVLMAQSGLHIPAGEGSRLGIFRQVFADIGDEQSIEQSLSTFSSHMN 393 Query 422 QIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLA 481 I I +A SL+LLDE GTDPA G A+A+S LE A + TTH+ LK A Sbjct 394 NIVEIIGKAGPDSLVLLDELGAGTDPAEGAALAQSILEKLHSAGAKTVATTHYGELKDFA 453 Query 482 DNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESE 541 R N S+EF+ L PTY+LL G PG+S A E+A R+GL ++++AR++ +E Sbjct 454 LTRERVENASVEFDAITLRPTYRLLIGKPGRSNAFEIAARLGLPEEVVKRARSFLTAEHI 513 Query 542 RMENLLKELQLKRIEINEELTKQNLLTQKLDSEFKSLKNEKEQL 585 + E L++ L+ + +E + +L SE ++LK E++ Sbjct 514 QAEELMRSLE----KTQQEAEAERRRAAELASEARALKERYEKI 553 Range 2: 607 to 784 Score:67.0 bits(162), Expect:6e-10, Method:Compositional matrix adjust., Identities:60/199(30%), Positives:88/199(44%), Gaps:25/199(12%) Query 755 KSTKEKVRSAQQTAKEAQSQ----GRSPEFWKPGMSAKSTKLKEKGVVLKTADSKGNIEC 810 + +EK+R QQ A + G +P +PG T+ +KG VL+ + G + Sbjct 607 REAREKLRKLQQRVGRAVPEKTVPGEAPAGLRPGEEVFLTRYNQKGYVLEPPGAGGEVLV 666 Query 811 QFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQH 870 Q G++K+ +P EL E P S LN + EI P L Sbjct 667 QVGVIKMNVPLRELRRVKEARPAGGQSEVAGVLLN--------------KAREISPELD- 711 Query 871 GGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKL 930 L G DE+L +++ LD + + RV +IHG G G ++ ++ R L Sbjct 712 ------LRGLYADEALLEVEKYLDDAYLAGLSRVYLIHGKGTGSLRAAIHRQLSGHRRVK 765 Query 931 RFRGGRHGEGGDGVTIVEF 949 FR G HGEGG GVT+VE Sbjct 766 SFRLGEHGEGGLGVTVVEL 784 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Staphylococcus aureus subsp. aureus str. Newman] Sequence ID: A6QG46.1 Length: 782 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Staphylococcus aureus subsp. aureus USA300_TCH1516] Sequence ID: A8Z1S5.1 Length: 782 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Staphylococcus aureus subsp. aureus USA300] Sequence ID: Q2FHT7.1 Length: 782 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Staphylococcus aureus subsp. aureus NCTC 8325] Sequence ID: Q2FZD3.1 Length: 782 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Staphylococcus aureus subsp. aureus COL] Sequence ID: Q5HGU0.1 Length: 782 Range 1: 1 to 630 Score:268 bits(686), Expect:4e-76, Method:Compositional matrix adjust., Identities:186/648(29%), Positives:341/648(52%), Gaps:30/648(4%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 +RQ L LE+ KI +A + +++ P E F T E+ + + Sbjct 1 MRQKTLDVLEFEKIKSLVANETISDLGLEKVNQMMPATNFETVVFQMEETDEIAQIYNKH 60 Query 75 NGISLESFDFTLFQNFLQR---GALLSPQALYQILITLKLCHSIQSFFK--YEKSRATKY 129 SL + F+ R G +L+ L I +++ + ++F+ E+ KY Sbjct 61 RLPSLSGL--SKVSAFIHRADIGGVLNVSELNLIKRLIQVQNQFKTFYNQLVEEDEGVKY 118 Query 130 PNLFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEIL 189 P L + N L +L ++N++ D ++ +AS EL RS++ ++I + LD I+ Sbjct 119 PILDDKMNQLPVLTDLFQQINETCDT-YDLYDNASYELQGIRSKISSTNQRIRQNLDRIV 177 Query 190 KKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQ 249 K Q + L D + +R+ V+P++A+ + GI S SG T++IEP ++ Q Sbjct 178 KSQANQKKLSDAIVTVRNERNVIPVKAEYRQDFNGIVHDQSASGQTLYIEPSSVVEMNNQ 237 Query 250 LEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEF 309 + + ++D +E++RIL +L+ + +L + +++ Q D +IA+ +++ I G KP F Sbjct 238 ISRLRHDEAIEKERILTQLTGYVAADKDALLVAEQVMGQLDFLIAKARYSRSIKGTKPIF 297 Query 310 LKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVA 369 + R + L A HPL L + +AN + + +++GPN GGKTV Sbjct 298 KEDRTV----YLPKAYHPL--LNRETVVANTIEFMEDIE------TVIITGPNTGGKTVT 345 Query 370 MKTVGIIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISE 428 +KT+G+I +MA++GL + + D +++ ++N++ ++GD Q+ E+ LSTFS H+ I I + Sbjct 346 LKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILK 405 Query 429 QANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFF 488 A++ SL+L DE GTDP+ G A+A S L++ + V+ TTH+ LK + N Sbjct 406 HADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVM 465 Query 489 NGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLK 548 N S+EF+ L PTYKLL G+PG+S A ++++++GL+ NII KA+T G++ + + +++ Sbjct 466 NASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIE 525 Query 549 ELQ--LKRIEINE-ELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLN 605 L+ KR+E EL + L ++ + L + +Q L+E + K +++ Sbjct 526 SLERNYKRVETQRLELDR---LVKEAEQVHDDLSKQYQQFQNYEKSLIEEAKEKANQKIK 582 Query 606 AFENRLE--IRE-RQFEKQKETLLREIHEISHKETIENNLEISQAQQN 650 A + I++ RQ +QK ++E I K+ ++++ E +QN Sbjct 583 AATKEADDIIKDLRQLREQKGADVKEHELIDKKKRLDDHYEAKSIKQN 630 Range 2: 642 to 778 Score:55.1 bits(131), Expect:2e-06, Method:Compositional matrix adjust., Identities:49/163(30%), Positives:77/163(47%), Gaps:26/163(15%) Query 784 GMSAKSTKLKEKGVVLKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSS 843 G K +KG VL+ + + I Q GI+K+K+P +L +K Sbjct 642 GDEVKVLSYGQKGEVLEIVNDEEAI-VQMGIIKMKLPIEDL--------------EKKQK 686 Query 844 LNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDR 903 VKP TK + Q+ + T + L G +++L +LD LD+ + ++ Sbjct 687 EKVKP-TKMVTR----QNRQTIKT------ELDLRGYRYEDALIELDQYLDQAVLSNYEQ 735 Query 904 VVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTI 946 V IIHG G G +++ V++HL+ FRGG EGG GVT+ Sbjct 736 VYIIHGKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTV 778 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Thermotoga maritima MSB8] Sequence ID: Q9X105.1 Length: 757 Range 1: 73 to 615 Score:268 bits(684), Expect:4e-76, Method:Compositional matrix adjust., Identities:170/579(29%), Positives:308/579(53%), Gaps:37/579(6%) Query 91 LQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDLKPHMELHAKLN 150 ++ G+ L P L ++ + L+ C ++ ++EK ++ F+ + + +E ++N Sbjct 73 VKSGSPLEPWELLRVSVFLEGCDILKK--EFEKREYSRLKETFSRLSSFREFVE---EVN 127 Query 151 KSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHY 210 + ++ DG I ASP L R+ + +I + D+ ++ LQ+ +++ RDG Y Sbjct 128 RCIEQDGEISDRASPRLREIRTEKKRLSSEIKRKADDFVRTHS--QILQEQMYVYRDGRY 185 Query 211 VLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRILRELSK 270 + P++A K+ + GI +S SG+TVF+EP ++ + + +E RILR+L+ Sbjct 186 LFPVKASMKNAVRGIVHHLSSSGATVFLEPDEFVELNNRVRLLEEEERLEISRILRQLTN 245 Query 271 DCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFL 330 D+ + E++ +FD++ AR KFA +G +KP + R L+NA+HPL Sbjct 246 ILLSRLNDLERNVELIARFDSLYARVKFAREFNGT---VVKP---SSRIRLVNARHPL-- 297 Query 331 LENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDK 390 + ++ + +L L P +G ++++GPN GGKTV +KTVG+ + +G + CD+ Sbjct 298 IPKERVVPINLELPPNKRG------FIITGPNMGGKTVTVKTVGLFTALMMSGFPLPCDE 351 Query 391 A-EIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAI 449 E++ + I ++G+ Q+ E+ LSTFS H+ +I I + A+ SL++LDE GTDP Sbjct 352 GTELKVFPKIMADIGEEQSIEQSLSTFSSHMKKIVEIVKNADSDSLVILDELGSGTDPVE 411 Query 450 GVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGI 509 G A+A + +E K AT+ +TTH + +K A N N SMEF+P L PTY++L G+ Sbjct 412 GAALAIAIIEDLLEKGATIFVTTHLTPVKVFAMNHPLLLNASMEFDPETLSPTYRVLVGV 471 Query 510 PGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIEINEELTKQNLLTQ 569 PG S+A ++AE++GL+ II+ AR+ E +E L++ L K Sbjct 472 PGGSHAFQIAEKLGLDKRIIENARSRLSREEMELEGLIRSLHEK--------------IS 517 Query 570 KLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNAFENRLEIRERQFEKQKETLLREI 629 L+ E + L+ E+E+ +LR E+Y+ + ++ F+ L K K+ L + I Sbjct 518 LLEEEKRKLQKEREEYMKLREKYEEDYKKLRRMKIEEFDKELRELNDYIRKVKKELDQAI 577 Query 630 HEISHKETIENNLEISQAQQNNLSEKNQNKLAPAQKKEI 668 H ++ +++ E + + + Q ++ A ++EI Sbjct 578 H-VAKTGSVDEMREAVKTIEKEKKDLEQKRIEEATEEEI 615 Range 2: 681 to 754 Score:45.4 bits(106), Expect:0.003, Method:Compositional matrix adjust., Identities:26/74(35%), Positives:37/74(50%), Gaps:0/74(0%) Query 875 IQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRG 934 I + G TV+E+ + +D + + + IIHG G GK+ V L + FR Sbjct 681 IDIRGMTVEEAEPVVKKFIDDLMMNGISKGYIIHGKGTGKLASGVWEILRKDKRVVSFRF 740 Query 935 GRHGEGGDGVTIVE 948 G EGG GVT+VE Sbjct 741 GTPSEGGTGVTVVE 754 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Shouchella clausii KSM-K16] Sequence ID: Q5WEK0.1 Length: 787 Range 1: 8 to 585 Score:268 bits(686), Expect:5e-76, Method:Compositional matrix adjust., Identities:191/618(31%), Positives:312/618(50%), Gaps:49/618(7%) Query 23 LEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDL-----NTETNGI 77 LE+NK+ Q L ++ +EL P LE+ T+E ++ + GI Sbjct 8 LEYNKMKQQLLEHVASSLGRQKVNELVPSTSLEEVRHLQDETAEAANVLRLKGHVPLGGI 67 Query 78 SLESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFK-YEKSRATKYPNLFNLS 136 S D G +LS L +I TL ++ F + + + P L Sbjct 68 S----DVRPHIKRAAIGGVLSATELIEIASTLYGGKRVKQFIETIIEDGHIEVPILAGHV 123 Query 137 NDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRN 196 ++P + + + +D +G +L SAS L + R ++ + I +LD++ + + R Sbjct 124 EQIEPLSPIEKAIKQCIDDNGYVLDSASTSLRTVRHQIRSYESGIKSKLDQLTRSSNTRK 183 Query 197 ALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQND 256 L D + +R YVLP++ + + GI S SG+T+FIEP A+ QL +A+ Sbjct 184 MLSDAIVTIRSDRYVLPVKQEYRGTFGGIVHDQSSSGATLFIEPAAIVTLNNQLTEAKAK 243 Query 257 VEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLN 316 + E +RILRELS E +L + + L Q D I A+ +A + +KP LN Sbjct 244 EKREIERILRELSAKVAEESEQLLLNVDKLAQLDFICAKAYYAKAVKAVKP------TLN 297 Query 317 PR--FSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVG 374 R L A+HPL L K + +D+ + + + V++GPN GGKTV +KT+G Sbjct 298 DRGYLDLRQARHPL--LPPDKVVPSDMAIGDQVRS------LVITGPNTGGKTVTLKTIG 349 Query 375 IIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANEL 433 ++ LMA++GLFV + ++ E+ +E+IF ++GD Q+ E+ LSTFS H+ I I + NE Sbjct 350 LLTLMAQSGLFVPAAEETELAVFEHIFADIGDEQSIEQSLSTFSSHMKNIVSILNEMNEN 409 Query 434 SLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSME 493 SLIL DE GTDP G A+A S L++ + A + TTH+S LK A N N S+E Sbjct 410 SLILFDELGAGTDPTEGAALAISILDHVYKRGALAVATTHYSELKGYAYNREGALNASVE 469 Query 494 FEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLK 553 F+ L PTY+LL G+PG+S A ++ R+GL+ II +A+ S++ ++E ++ L+ Sbjct 470 FDVETLRPTYRLLVGVPGRSNAFAISRRLGLDERIIDQAKLQIDSDASQVEKMIASLE-- 527 Query 554 RIEINEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNAFENRLEI 613 DS+ KS ++E + +R + E + L+KR+ +FE E Sbjct 528 ------------------DSQ-KSAQSEWSRAEAVRRE-AEALKRDLEKRMASFEEMKEA 567 Query 614 RERQFEKQKETLLREIHE 631 ++ E++ E ++ E Sbjct 568 ALQKAEQKAEKVVAAAQE 585 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Staphylococcus aureus subsp. aureus JH9] Sequence ID: A5IS30.1 Length: 782 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Staphylococcus aureus subsp. aureus JH1] Sequence ID: A6U0W1.1 Length: 782 Range 1: 1 to 630 Score:268 bits(685), Expect:5e-76, Method:Compositional matrix adjust., Identities:186/648(29%), Positives:341/648(52%), Gaps:30/648(4%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 +RQ L LE+ KI +A + +++ P E F T E+ + + Sbjct 1 MRQKTLDVLEFEKIKSLVANETISDLGLEKVNQMMPATNFETVVFQMEETDEIAQIYNKH 60 Query 75 NGISLESFDFTLFQNFLQR---GALLSPQALYQILITLKLCHSIQSFFK--YEKSRATKY 129 SL + F+ R G +L+ L I +++ + ++F+ E+ KY Sbjct 61 RLPSLSGL--SKVSAFIHRADIGGVLNVSELNLIKRLIQVQNQFKTFYNQLVEEDEGVKY 118 Query 130 PNLFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEIL 189 P L + N L +L ++N++ D ++ +AS EL RS++ ++I + LD I+ Sbjct 119 PILDDKMNQLPVLTDLFHQINETCDT-YDLYDNASYELQGIRSKISSTNQRIRQNLDRIV 177 Query 190 KKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQ 249 K Q + L D + +R+ V+P++A+ + GI S SG T++IEP ++ Q Sbjct 178 KSQANQKKLSDAIVTVRNERNVIPVKAEYRQDFNGIVHDQSASGQTLYIEPSSVVEMNNQ 237 Query 250 LEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEF 309 + + ++D +E++RIL +L+ + +L + +++ Q D +IA+ +++ I G KP F Sbjct 238 ISRLRHDEAIEKERILTQLTGYVAADKDALLVTEQVMGQLDFLIAKARYSRSIKGTKPIF 297 Query 310 LKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVA 369 + R + L A HPL L + +AN + + +++GPN GGKTV Sbjct 298 KEERTV----YLPKAYHPL--LNRETVVANTIEFMEDIE------TVIITGPNTGGKTVT 345 Query 370 MKTVGIIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISE 428 +KT+G+I +MA++GL + + D +++ ++N++ ++GD Q+ E+ LSTFS H+ I I + Sbjct 346 LKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILK 405 Query 429 QANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFF 488 A++ SL+L DE GTDP+ G A+A S L++ + V+ TTH+ LK + N Sbjct 406 HADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVM 465 Query 489 NGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLK 548 N S+EF+ L PTYKLL G+PG+S A ++++++GL+ NII KA+T G++ + + +++ Sbjct 466 NASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIE 525 Query 549 ELQ--LKRIEINE-ELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLN 605 L+ KR+E EL + L ++ + L + +Q L+E + K +++ Sbjct 526 SLERNYKRVETQRLELDR---LVKEAEQVHDDLSKQYQQFQNYEKSLIEEAKEKANQKIK 582 Query 606 AFENRLE--IRE-RQFEKQKETLLREIHEISHKETIENNLEISQAQQN 650 A + I++ RQ +QK ++E I K+ ++++ E +QN Sbjct 583 AATKEADDIIKDLRQLREQKGADVKEHELIDKKKRLDDHYEAKSIKQN 630 Range 2: 642 to 778 Score:55.1 bits(131), Expect:2e-06, Method:Compositional matrix adjust., Identities:49/163(30%), Positives:77/163(47%), Gaps:26/163(15%) Query 784 GMSAKSTKLKEKGVVLKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSS 843 G K +KG VL+ + + I Q GI+K+K+P +L +K Sbjct 642 GDEVKVLSYGQKGEVLEIVNDEEAI-VQMGIIKMKLPIEDL--------------EKKQK 686 Query 844 LNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDR 903 VKP TK + Q+ + T + L G +++L +LD LD+ + ++ Sbjct 687 EKVKP-TKMVTR----QNRQTIKT------ELDLRGYRYEDALIELDQYLDQAVLSNYEQ 735 Query 904 VVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTI 946 V IIHG G G +++ V++HL+ FRGG EGG GVT+ Sbjct 736 VYIIHGKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTV 778 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Staphylococcus aureus RF122] Sequence ID: Q2YXD1.1 Length: 782 Range 1: 1 to 630 Score:268 bits(685), Expect:5e-76, Method:Compositional matrix adjust., Identities:186/648(29%), Positives:340/648(52%), Gaps:30/648(4%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 +RQ L LE+ KI +A + +++ P E F T E+ + + Sbjct 1 MRQKTLDVLEFEKIKSLVANETISDLGLEKVNQMMPATNFETVVFQMEETDEIAQIYNKH 60 Query 75 NGISLESFDFTLFQNFLQR---GALLSPQALYQILITLKLCHSIQSFFK--YEKSRATKY 129 SL + F+ R G +L+ L I +++ + ++F+ E+ KY Sbjct 61 RLPSLSGL--SKVSAFIHRADIGGVLNVSELNLIKRLIQVQNQFKTFYNQLVEEDEGVKY 118 Query 130 PNLFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEIL 189 P L + N L +L ++N++ D ++ +AS EL RS++ ++I + LD I+ Sbjct 119 PILDDKMNQLPVLTDLFQQINETCDT-YDLYDNASYELQGIRSKISSTNQRIRQNLDRIV 177 Query 190 KKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQ 249 K Q + L D + +R+ V+P++A+ + GI S SG T++IEP ++ Q Sbjct 178 KSQANQKKLSDAIVTVRNERNVIPVKAEYRQDFNGIVHDQSASGQTLYIEPSSVVEMNNQ 237 Query 250 LEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEF 309 + + ++D +E++RIL +L+ + +L + ++ Q D +IA+ +++ I G KP F Sbjct 238 ISRLRHDEAIEKERILTQLTGYVAADKDALLVAEHVMGQLDFLIAKARYSRSIKGTKPIF 297 Query 310 LKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVA 369 + R + L A HPL L + +AN + + +++GPN GGKTV Sbjct 298 KEERTV----YLPKAYHPL--LNRETVVANTIEFMEDIE------TVIITGPNTGGKTVT 345 Query 370 MKTVGIIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISE 428 +KT+G+I +MA++GL + + D +++ ++N++ ++GD Q+ E+ LSTFS H+ I I + Sbjct 346 LKTLGLIIIMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILK 405 Query 429 QANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFF 488 A++ SL+L DE GTDP+ G A+A S L++ + V+ TTH+ LK + N Sbjct 406 HADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLVMATTHYPELKAYSCNREGVM 465 Query 489 NGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLK 548 N S+EF+ L PTYKLL G+PG+S A ++++++GL+ NII KA+T G++ + + +++ Sbjct 466 NASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIE 525 Query 549 ELQ--LKRIEINE-ELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLN 605 L+ KR+E EL + L ++ + L + +Q L+E + K +++ Sbjct 526 SLERNYKRVETQRLELDR---LVKEAEQVHDDLSKQYQQFQNYEKSLIEEAKEKANQKIK 582 Query 606 AFENRLE--IRE-RQFEKQKETLLREIHEISHKETIENNLEISQAQQN 650 A + I++ RQ +QK ++E I K+ ++++ E +QN Sbjct 583 AATKEADDIIKDLRQLREQKGADVKEHELIDKKKRLDDHYEAKSIKQN 630 Range 2: 642 to 778 Score:55.1 bits(131), Expect:3e-06, Method:Compositional matrix adjust., Identities:49/163(30%), Positives:77/163(47%), Gaps:26/163(15%) Query 784 GMSAKSTKLKEKGVVLKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSS 843 G K +KG VL+ + + I Q GI+K+K+P +L +K Sbjct 642 GDEVKVLSYGQKGEVLEIVNDEEAI-VQMGIIKMKLPIEDL--------------EKKQK 686 Query 844 LNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDR 903 VKP TK + Q+ + T + L G +++L +LD LD+ + ++ Sbjct 687 EKVKP-TKMVTR----QNRQTIKT------ELDLRGYRYEDALIELDQYLDQAVLSNYEQ 735 Query 904 VVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTI 946 V IIHG G G +++ V++HL+ FRGG EGG GVT+ Sbjct 736 VYIIHGKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTV 778 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Staphylococcus aureus subsp. aureus MRSA252] Sequence ID: Q6GHU1.1 Length: 782 Range 1: 1 to 630 Score:268 bits(685), Expect:6e-76, Method:Compositional matrix adjust., Identities:186/648(29%), Positives:342/648(52%), Gaps:30/648(4%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 +RQ L LE++KI +A + +++ P E F T E+ + + Sbjct 1 MRQKTLDVLEFDKIKSLVANETISDLGLEKVNQMMPATNFETVVFQMEETDEIAQIYNKH 60 Query 75 NGISLESFDFTLFQNFLQR---GALLSPQALYQILITLKLCHSIQSFFK--YEKSRATKY 129 SL + F+ R G +L+ L I +++ + ++F+ E+ KY Sbjct 61 RLPSLSGL--SKVSAFIHRADIGGVLNVSELNLIKRLIQVQNQFKTFYNQLVEEDEGVKY 118 Query 130 PNLFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEIL 189 P L + N L +L ++N++ D ++ +AS EL RS++ ++I + LD I+ Sbjct 119 PILDDKMNQLPVLTDLFQQINETCDT-YDLYDNASYELQGIRSKISSTNQRIRQNLDRIV 177 Query 190 KKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQ 249 K Q + L D + +R+ V+P++A+ + GI S SG T++IEP ++ Q Sbjct 178 KSQANQKKLSDAIVTVRNERNVIPVKAEYRQDFNGIVHDQSASGQTLYIEPSSVVEMNNQ 237 Query 250 LEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEF 309 + + ++D +E++RIL +L+ + +L + +++ Q D +IA+ + + I G KP F Sbjct 238 ISRLRHDEAIEKERILTQLTGYVAADKDALLVAEQVMGQLDFLIAKARCSRSIKGTKPIF 297 Query 310 LKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVA 369 + R + L A HPL L + +AN + + +++GPN GGKTV Sbjct 298 KEERTV----YLPKAYHPL--LNRETVVANTIEFMEDIE------TVIITGPNTGGKTVT 345 Query 370 MKTVGIIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISE 428 +KT+G+I +MA++GL + + D +++ ++N++ ++GD Q+ E+ LSTFS H+ I I + Sbjct 346 LKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILK 405 Query 429 QANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFF 488 A++ SL+L DE GTDP+ G A+A S L++ + V+ TTH+ LK + N Sbjct 406 NADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVM 465 Query 489 NGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLK 548 N S+EF+ L PTYKLL G+PG+S A ++++++GL+ NII KA+T G++ + + +++ Sbjct 466 NASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIE 525 Query 549 ELQ--LKRIEINE-ELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLN 605 L+ KR+E EL + L ++ + L + +Q L+E+ + K +++ Sbjct 526 SLERNYKRVETQRLELDR---LVKEAEQVHDDLSKQYQQFQNYEKSLIEDAKEKANQKIK 582 Query 606 AFENRLE--IRE-RQFEKQKETLLREIHEISHKETIENNLEISQAQQN 650 A + I++ RQ +QK ++E I K+ ++++ E +QN Sbjct 583 AATKEADDIIKDLRQLREQKGADVKEHELIDKKKRLDDHYEAKSIKQN 630 Range 2: 642 to 778 Score:55.1 bits(131), Expect:3e-06, Method:Compositional matrix adjust., Identities:49/163(30%), Positives:77/163(47%), Gaps:26/163(15%) Query 784 GMSAKSTKLKEKGVVLKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSS 843 G K +KG VL+ + + I Q GI+K+K+P +L +K Sbjct 642 GDEVKVLSYGQKGEVLEIVNDEEAI-VQMGIIKMKLPIEDL--------------EKKQK 686 Query 844 LNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDR 903 VKP TK + Q+ + T + L G +++L +LD LD+ + ++ Sbjct 687 EKVKP-TKMVTR----QNRQTIKT------ELDLRGYRYEDALIELDQYLDQAVLSNYEQ 735 Query 904 VVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTI 946 V IIHG G G +++ V++HL+ FRGG EGG GVT+ Sbjct 736 VYIIHGKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTV 778 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292] Sequence ID: Q49WR1.1 Length: 782 Range 1: 1 to 598 Score:268 bits(684), Expect:7e-76, Method:Compositional matrix adjust., Identities:174/622(28%), Positives:323/622(51%), Gaps:28/622(4%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 +RQ +L LE++KI + K+ ++ P + F T E+ + + Sbjct 1 MRQKSLNVLEFDKIKALIENETISDLGKEKVVDMAPATDFNTVEFQMNETDEISQIYNKH 60 Query 75 NGISLESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFK--YEKSRATKYPN 131 SL + + + + G +LS L I +++ + ++F+ + YP Sbjct 61 RMPSLSGLAKISTYIHRAKIGGVLSVSELNVIKRLIQIQNQYKTFYNNLLNEEETINYPI 120 Query 132 LFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKK 191 L + L +L+ +++ D ++ +AS EL RS++ ++I + LD+I+K Sbjct 121 LNDRMEQLPVLSDLYQSIHQKCDT-YDLYDNASYELQGIRSKISSTNQRIKQNLDKIVKS 179 Query 192 QDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLE 251 Q + L D + +R+ V+P++A+ + GI S SG T++IEP ++ Q+ Sbjct 180 QANQKKLSDAIVTVRNERNVIPVKAEYRQDFNGIVHDQSASGQTLYIEPSSIVEMSNQIS 239 Query 252 KAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLK 311 + +ND +E +RIL L+ + + L S I+ Q D + A+ ++A I G KP+F K Sbjct 240 RLKNDEAIERERILSALTVEVAEEADACLISESIMGQIDFLTAKARYASSIKGTKPQFTK 299 Query 312 PRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMK 371 R + L A HPL L+ + +AN + A + +++GPN GGKTV +K Sbjct 300 DRTV----YLPKAFHPL--LDKQTVVANTIEFAQDIE------TVIITGPNTGGKTVTLK 347 Query 372 TVGIIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQA 430 T+G+I +MA++G+ + + D +++ +EN++ ++GD Q+ E+ LSTFS H+ I I + Sbjct 348 TLGLIIVMAQSGILIPTLDGSQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDT 407 Query 431 NELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNG 490 + SLIL DE GTDP+ G A+A S L++ + V+ TTH+ LK + N N Sbjct 408 TKNSLILFDELGAGTDPSEGAALAMSILDHVHEIGSLVMATTHYPELKAYSYNREGVMNA 467 Query 491 SMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKEL 550 S+EF+ + L PTYKLL G+PG+S A ++++++GLN +IQKA++ G + + + ++ L Sbjct 468 SVEFDVNTLSPTYKLLMGVPGRSNAFDISKKLGLNMKVIQKAKSMIGQDEQEINEMIASL 527 Query 551 QLKRIEINEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNAFENR 610 + ++E+ + + L ++ +L + EQ Y+N ++ +N + + Sbjct 528 ESNSKRVDEQRIELDYLLREAQDTHDALAKQYEQ-----------YQNHEKQLMNEAKEK 576 Query 611 LEIRERQFEKQKETLLREIHEI 632 R + K+ + +L+E+ E+ Sbjct 577 ANQRVKSATKEADDILKELREL 598 Range 2: 642 to 781 Score:57.4 bits(137), Expect:5e-07, Method:Compositional matrix adjust., Identities:48/166(29%), Positives:74/166(44%), Gaps:26/166(15%) Query 784 GMSAKSTKLKEKGVVLKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSS 843 G K +KG VL+ D+ + Q GI+K+K+P +L K+ S P K Sbjct 642 GDEVKVLTYGQKGEVLELIDNNEAV-VQMGIIKMKLPLEDL-----EKTKKTKSEPTK-- 693 Query 844 LNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDR 903 K N Q ++ + L G DE++ +D LD+ + ++ Sbjct 694 ---------MIKRENRQSIKME---------LDLRGYRYDEAMVAVDQYLDQAVLSNYEQ 735 Query 904 VVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 V IIHG G G +++ V+ HL+ +R G EGG GVT+VE Sbjct 736 VYIIHGKGTGALQKGVQNHLKRHKSVASYRNGMPSEGGFGVTVVEI 781 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Agathobacter rectalis ATCC 33656] Sequence ID: C4ZI07.1 Length: 792 Range 1: 9 to 607 Score:268 bits(684), Expect:8e-76, Method:Compositional matrix adjust., Identities:194/652(30%), Positives:325/652(49%), Gaps:60/652(9%) Query 23 LEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISLESF 82 LE+NKI L+ +A +KK LEP +L + T T++ L + +G+S Sbjct 9 LEYNKILTMLSSYAACDETKKRCLSLEPITDLYEIRHLQTTTADALSRLYKDSGVS---- 64 Query 83 DFTLFQNF------LQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLS 136 F N L G L+ L +I L++ ++++ + K +L L Sbjct 65 -FVGIHNVHASLKRLDIGGALNTTELLRICSLLEVAKRVKAYGRSAMDN-EKQDSLSGLF 122 Query 137 NDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRN 196 ++P L ++ + + + I ASPEL R + +I QL +++ R Sbjct 123 AGIEPVSALCDEIKRCILSEEEIADDASPELFKIRKSIRGMNDRIHAQLTKLMNNSTTRT 182 Query 197 ALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQND 256 LQD V +RDG Y LP++A+ K + G+ S +GST+FIEP A+ +L++ Sbjct 183 YLQDAVVTMRDGRYCLPVKAEAKGNVPGMMHDQSSTGSTLFIEPMAVVNLNNELKELFIK 242 Query 257 VEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLN 316 + E ++IL LS + + EIL++ D I A+ A +G+ P+F +N Sbjct 243 EQEEIEKILAALSDKVAMNAAALEQDYEILSELDFIFAKANLAKSYNGVAPDFNTDGHIN 302 Query 317 PRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGII 376 R +HPL L+ KK + D+ L + +++GPN GGKTV++KTVG++ Sbjct 303 IR----KGRHPL--LDAKKVVPIDVRLGEDYKQ------LIITGPNTGGKTVSLKTVGLL 350 Query 377 ALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSL 435 LM +AGL + + D++++ +E++F ++GD Q+ E+ LSTFS H+ I +I E+A++ SL Sbjct 351 TLMGQAGLHIPAADRSKLAIFEDVFADIGDEQSIEQSLSTFSSHMTNIVKILEKADDRSL 410 Query 436 ILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFE 495 L DE GTDP G A+A S L A + TTH+S LK A + N EF Sbjct 411 CLFDELCSGTDPTEGAALAISILNRLHQYGAITMATTHYSELKVYALSTDGVENACCEFN 470 Query 496 PHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRI 555 L PTY+LL GIPG+S A ++ ++GL+ NII+ A++ E+L+ L+ +R Sbjct 471 VETLSPTYRLLIGIPGKSNAFAISSKLGLDENIIEDAKSRINDNDLDFEDLIASLESQRQ 530 Query 556 EINEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNAFENRLEIRE 615 I EKEQL + +Y+ +++K + +LE + Sbjct 531 TI-----------------------EKEQLE------INSYKAEIEK----LKKQLEEKN 557 Query 616 RQFEKQKETLLREIHEISHKETIENNLEISQAQQNNLSEKNQNKLAPAQKKE 667 + +K K+ +LRE +E ++K +++ E++ N ++ Q + AP + E Sbjct 558 ERIDKSKDKILREANEEAYK-ILQDAKELADKTIRNFNKYGQGQ-APMSQME 607 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Staphylococcus aureus subsp. aureus MSSA476] Sequence ID: Q6GA70.1 Length: 782 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Staphylococcus aureus subsp. aureus MW2] Sequence ID: Q8NX56.1 Length: 782 Range 1: 1 to 630 Score:268 bits(684), Expect:8e-76, Method:Compositional matrix adjust., Identities:185/648(29%), Positives:341/648(52%), Gaps:30/648(4%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 +RQ L LE+ KI +A + +++ P E F T E+ + + Sbjct 1 MRQKTLDVLEFEKIKSLVANETISDLGLEKVNQMMPATNFETVVFQMEETDEIAQIYNKH 60 Query 75 NGISLESFDFTLFQNFLQR---GALLSPQALYQILITLKLCHSIQSFFK--YEKSRATKY 129 SL + F+ R G +L+ L I +++ + ++F+ E+ KY Sbjct 61 RLPSLSGL--SKVSAFIHRADIGGVLNVSELNLIKRLIQVQNQFKTFYNQLVEEDEGVKY 118 Query 130 PNLFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEIL 189 P L + N L +L ++N++ D ++ +AS EL RS++ ++I + LD I+ Sbjct 119 PILDDKMNQLPVLTDLFHQINETCDT-YDLYDNASYELQGIRSKISSTNQRIRQNLDRIV 177 Query 190 KKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQ 249 K Q + L D + +R+ V+P++A+ + GI S SG T++IEP ++ Q Sbjct 178 KSQANQKKLSDAIVTVRNERNVIPVKAEYRQDFNGIVHDQSASGQTLYIEPSSVVEMNNQ 237 Query 250 LEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEF 309 + + ++D +E++RIL +L+ + +L + +++ Q D +IA+ +++ + G KP F Sbjct 238 ISRLRHDEAIEKERILTQLTGYVAADKDALLVAEQVMGQLDFLIAKARYSRSVKGTKPIF 297 Query 310 LKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVA 369 + R + L A HPL L + +AN + + +++GPN GGKTV Sbjct 298 KEDRTV----YLPKAYHPL--LNRETVVANTIEFMEDIE------TVIITGPNTGGKTVT 345 Query 370 MKTVGIIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISE 428 +KT+G+I +MA++GL + + D +++ ++N++ ++GD Q+ E+ LSTFS H+ I I + Sbjct 346 LKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILK 405 Query 429 QANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFF 488 A++ SL+L DE GTDP+ G A+A S L++ + V+ TTH+ LK + N Sbjct 406 HADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVM 465 Query 489 NGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLK 548 N S+EF+ L PTYKLL G+PG+S A ++++++GL+ NII KA+T G++ + + +++ Sbjct 466 NASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIE 525 Query 549 ELQ--LKRIEINE-ELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLN 605 L+ KR+E EL + L ++ + L + +Q L+E + K +++ Sbjct 526 SLERNYKRVETQRLELDR---LVKEAEQVHDDLSKQYQQFQNYEKSLIEEAKEKANQKIK 582 Query 606 AFENRLE--IRE-RQFEKQKETLLREIHEISHKETIENNLEISQAQQN 650 A + I++ RQ +QK ++E I K+ ++++ E +QN Sbjct 583 AATKEADDIIKDLRQLREQKGADVKEHELIDKKKRLDDHYEAKSIKQN 630 Range 2: 642 to 778 Score:55.1 bits(131), Expect:3e-06, Method:Compositional matrix adjust., Identities:49/163(30%), Positives:77/163(47%), Gaps:26/163(15%) Query 784 GMSAKSTKLKEKGVVLKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSS 843 G K +KG VL+ + + I Q GI+K+K+P +L +K Sbjct 642 GDEVKVLSYGQKGEVLEIVNDEEAI-VQMGIIKMKLPIEDL--------------EKKQK 686 Query 844 LNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDR 903 VKP TK + Q+ + T + L G +++L +LD LD+ + ++ Sbjct 687 EKVKP-TKMVTR----QNRQTIKT------ELDLRGYRYEDALIELDQYLDQAVLSNYEQ 735 Query 904 VVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTI 946 V IIHG G G +++ V++HL+ FRGG EGG GVT+ Sbjct 736 VYIIHGKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTV 778 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Thermotoga petrophila RKU-1] Sequence ID: A5IMS8.1 Length: 757 Range 1: 73 to 615 Score:267 bits(682), Expect:9e-76, Method:Compositional matrix adjust., Identities:170/579(29%), Positives:307/579(53%), Gaps:37/579(6%) Query 91 LQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDLKPHMELHAKLN 150 ++ G+ L P L ++ + L+ C ++ F EK ++ F+ + + +E ++N Sbjct 73 VKSGSALEPWELLRVSVFLEGCDILKKDF--EKREYSRLKETFSRLSSFRDFVE---EVN 127 Query 151 KSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHY 210 + ++ DG I ASP L R+ + +I + D+ ++ LQ+ +++ RDG Y Sbjct 128 RCIEQDGEISDRASPRLREIRTEKKRLSSEIKRKADDFVRTHS--QILQEQMYVYRDGRY 185 Query 211 VLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRILRELSK 270 + P++A ++ + GI +S SG+TVF+EP ++ + + +E RILR+L+ Sbjct 186 LFPVKASMRNAVRGIVHHLSSSGATVFLEPDEFVELNNRVRLLEEEERLEISRILRQLTN 245 Query 271 DCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFL 330 D+ + E++ +FD++ AR KFA +G +KP + R L+NA+HPL Sbjct 246 ILLSRLNDLERNVELIARFDSLYARVKFAREFNGT---VVKP---SSRIRLVNARHPL-- 297 Query 331 LENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDK 390 + ++ + +L L P +G ++++GPN GGKTV +KTVG+ + +G + CD+ Sbjct 298 IPKERVVPINLELPPNKRG------FIITGPNMGGKTVTVKTVGLFTALMMSGFPLPCDE 351 Query 391 A-EIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAI 449 E++ + I ++G+ Q+ E+ LSTFS H+ +I I + A+ SL++LDE GTDP Sbjct 352 GTELKVFPKIMADIGEEQSIEQSLSTFSSHMKKIVEIVKNADSDSLVILDELGSGTDPVE 411 Query 450 GVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGI 509 G A+A + +E K AT+ +TTH + +K A N N SMEF+P L PTY++L G+ Sbjct 412 GAALAVAIIEDLLEKGATIFVTTHLTPVKVFAMNHPLLLNASMEFDPETLSPTYRVLVGV 471 Query 510 PGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIEINEELTKQNLLTQ 569 PG S+A ++AE++GL+ II+ AR+ E +E L++ L K Sbjct 472 PGGSHAFQIAEKLGLDKRIIENARSRLSREEMELEGLIRSLHEK--------------IS 517 Query 570 KLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNAFENRLEIRERQFEKQKETLLREI 629 L+ E + L+ E+E+ +LR E+Y+ + ++ F+ L K K+ L + I Sbjct 518 LLEEEKRKLQKEREEYMKLREKYEEDYKKLRRMKIEEFDKELRELNDYIRKVKKELDQAI 577 Query 630 HEISHKETIENNLEISQAQQNNLSEKNQNKLAPAQKKEI 668 H ++ +++ E + + + Q ++ A ++EI Sbjct 578 H-VAKTGSVDEMREAVKTIEKEKKDLEQKRIEEATEEEI 615 Range 2: 681 to 754 Score:45.1 bits(105), Expect:0.003, Method:Compositional matrix adjust., Identities:26/74(35%), Positives:37/74(50%), Gaps:0/74(0%) Query 875 IQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRG 934 I + G TV+E+ + +D + + + IIHG G GK+ V L + FR Sbjct 681 IDIRGMTVEEAEPVVKKFIDDLMMNGISKGYIIHGKGTGKLASGVWEILRKDKRVVSFRF 740 Query 935 GRHGEGGDGVTIVE 948 G EGG GVT+VE Sbjct 741 GTPSEGGTGVTVVE 754 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Staphylococcus aureus subsp. aureus Mu3] Sequence ID: A7X169.1 Length: 782 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Staphylococcus aureus subsp. aureus Mu50] Sequence ID: P65495.1 Length: 782 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Staphylococcus aureus subsp. aureus N315] Sequence ID: P65496.1 Length: 782 Range 1: 1 to 630 Score:267 bits(683), Expect:1e-75, Method:Compositional matrix adjust., Identities:185/648(29%), Positives:341/648(52%), Gaps:30/648(4%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 +RQ L LE+ KI +A + +++ P E F T E+ + + Sbjct 1 MRQKTLDVLEFEKIKSLVANETISDLGLEKVNQMMPATNFETVVFQMEETDEIAQIYNKH 60 Query 75 NGISLESFDFTLFQNFLQR---GALLSPQALYQILITLKLCHSIQSFFK--YEKSRATKY 129 SL + F+ R G +L+ L I +++ + ++F+ E+ KY Sbjct 61 RLPSLSGL--SKVSAFIHRADIGGVLNVSELNLIKRLIQVQNQFKTFYNQLVEEDEGVKY 118 Query 130 PNLFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEIL 189 P L + N L +L ++N++ D ++ +AS EL RS++ ++I + LD I+ Sbjct 119 PILDDKMNQLPVLTDLFHQINETCDT-YDLYDNASYELQGIRSKISSTNQRIRQNLDRIV 177 Query 190 KKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQ 249 K Q + L D + +R+ V+P++A+ + GI S SG T++IEP ++ Q Sbjct 178 KSQANQKKLSDAIVTVRNERNVIPVKAEYRQDFNGIVHDQSASGQTLYIEPSSVVEMNNQ 237 Query 250 LEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEF 309 + + ++D +E++R+L +L+ + +L + +++ Q D +IA+ +++ I G KP F Sbjct 238 ISRLRHDEAIEKERVLTQLTGYVAADKDALLVAEQVMGQLDFLIAKARYSRSIKGTKPIF 297 Query 310 LKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVA 369 + R + L A HPL L + +AN + + +++GPN GGKTV Sbjct 298 KEERTV----YLPKAYHPL--LNRETVVANTIEFMEDIE------TVIITGPNTGGKTVT 345 Query 370 MKTVGIIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISE 428 +KT+G+I +MA++GL + + D +++ ++N++ ++GD Q+ E+ LSTFS H+ I I + Sbjct 346 LKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILK 405 Query 429 QANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFF 488 A++ SL+L DE GTDP+ G A+A S L++ + V+ TTH+ LK + N Sbjct 406 HADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVM 465 Query 489 NGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLK 548 N S+EF+ L PTYKLL G+PG+S A ++++++GL+ NII KA+T G++ + + +++ Sbjct 466 NASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIE 525 Query 549 ELQ--LKRIEINE-ELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLN 605 L+ KR+E EL + L ++ + L + +Q L+E + K +++ Sbjct 526 SLERNYKRVETQRLELDR---LVKEAEQVHDDLSKQYQQFQNYEKSLIEEAKEKANQKIK 582 Query 606 AFENRLE--IRE-RQFEKQKETLLREIHEISHKETIENNLEISQAQQN 650 A + I++ RQ +QK ++E I K+ ++++ E +QN Sbjct 583 AATKEADDIIKDLRQLREQKGADVKEHELIDKKKRLDDHYEAKSIKQN 630 Range 2: 642 to 778 Score:55.1 bits(131), Expect:3e-06, Method:Compositional matrix adjust., Identities:49/163(30%), Positives:77/163(47%), Gaps:26/163(15%) Query 784 GMSAKSTKLKEKGVVLKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSS 843 G K +KG VL+ + + I Q GI+K+K+P +L +K Sbjct 642 GDEVKVLSYGQKGEVLEIVNDEEAI-VQMGIIKMKLPIEDL--------------EKKQK 686 Query 844 LNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDR 903 VKP TK + Q+ + T + L G +++L +LD LD+ + ++ Sbjct 687 EKVKP-TKMVTR----QNRQTIKT------ELDLRGYRYEDALIELDQYLDQAVLSNYEQ 735 Query 904 VVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTI 946 V IIHG G G +++ V++HL+ FRGG EGG GVT+ Sbjct 736 VYIIHGKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTV 778 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Thermotoga sp. RQ2] Sequence ID: B1LC69.1 Length: 757 Range 1: 73 to 615 Score:266 bits(681), Expect:1e-75, Method:Compositional matrix adjust., Identities:170/579(29%), Positives:307/579(53%), Gaps:37/579(6%) Query 91 LQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDLKPHMELHAKLN 150 ++ G+ L P L ++ + L+ C ++ F EK ++ F+ + + +E ++N Sbjct 73 VKSGSALEPWELLRVSVFLEGCDILKKDF--EKREYSRLKETFSRLSSFRDFVE---EVN 127 Query 151 KSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHY 210 + ++ DG I ASP L R+ + +I + D+ ++ LQ+ +++ RDG Y Sbjct 128 RCIEQDGEISDRASPRLREIRTEKKRLASEIKRKADDFVRTHS--QILQEQMYVYRDGRY 185 Query 211 VLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRILRELSK 270 + P++A ++ + GI +S SG+TVF+EP ++ + + +E RILR+L+ Sbjct 186 LFPVKASMRNAVRGIVHHLSSSGATVFLEPDEFVELNNRVRLLEEEERLEISRILRQLTN 245 Query 271 DCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFL 330 D+ + E++ +FD++ AR KFA +G +KP + R L+NA+HPL Sbjct 246 ILLSRLNDLERNVELIARFDSLYARVKFAREFNGT---VVKP---SSRIRLVNARHPL-- 297 Query 331 LENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDK 390 + ++ + +L L P +G ++++GPN GGKTV +KTVG+ + +G + CD+ Sbjct 298 IPKERVVPINLELPPNKRG------FIITGPNMGGKTVTVKTVGLFTALMMSGFPLPCDE 351 Query 391 A-EIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAI 449 E++ + I ++G+ Q+ E+ LSTFS H+ +I I + A+ SL++LDE GTDP Sbjct 352 GTELKVFPKIMADIGEEQSIEQSLSTFSSHMKKIVEIVKNADSDSLVILDELGSGTDPVE 411 Query 450 GVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGI 509 G A+A + +E K AT+ +TTH + +K A N N SMEF+P L PTY++L G+ Sbjct 412 GAALAVAIIEDLLEKGATIFVTTHLTPVKVFAMNHPLLLNASMEFDPETLSPTYRVLVGV 471 Query 510 PGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIEINEELTKQNLLTQ 569 PG S+A ++AE++GL+ II+ AR+ E +E L++ L K Sbjct 472 PGGSHAFQIAEKLGLDKRIIENARSRLSREEMELEGLIRSLHEK--------------IS 517 Query 570 KLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNAFENRLEIRERQFEKQKETLLREI 629 L+ E + L+ E+E+ +LR E+Y+ + ++ F+ L K K+ L + I Sbjct 518 LLEEEKRKLQKEREEYMKLREKYEEDYKKLRRMKIEEFDKELRELNDYIRKVKKELDQAI 577 Query 630 HEISHKETIENNLEISQAQQNNLSEKNQNKLAPAQKKEI 668 H ++ +++ E + + + Q ++ A ++EI Sbjct 578 H-VAKTGSVDEMREAVKTIEKEKKDLEQKRIEEATEEEI 615 Range 2: 681 to 754 Score:45.1 bits(105), Expect:0.003, Method:Compositional matrix adjust., Identities:26/74(35%), Positives:37/74(50%), Gaps:0/74(0%) Query 875 IQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRG 934 I + G TV+E+ + +D + + + IIHG G GK+ V L + FR Sbjct 681 IDIRGMTVEEAEPVVKKFIDDLMMNGISKGYIIHGKGTGKLASGVWEILRKDKRVVSFRF 740 Query 935 GRHGEGGDGVTIVE 948 G EGG GVT+VE Sbjct 741 GTPSEGGTGVTVVE 754 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Caldicellulosiruptor saccharolyticus DSM 8903] Sequence ID: A4XK62.1 Length: 787 Range 1: 1 to 552 Score:266 bits(681), Expect:2e-75, Method:Compositional matrix adjust., Identities:178/588(30%), Positives:313/588(53%), Gaps:54/588(9%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 + Q L LE++KI + L A +K+ F L P ++ + D+ E Sbjct 1 MNQKTLKALEYDKIVEILKNMAKSTPAKEYFENLIP-------------STNLADIENEL 47 Query 75 NGISLESFDFTL---------FQNFL------QRGALLSPQALYQILITLKLCHSIQSFF 119 N + E + + L F+N L + GA L+P + QI LKL + ++S+ Sbjct 48 NKVD-EGYRYVLKYGNPPTLEFENILPSLKKSKLGATLNPHEILQIGKVLKLSYEMRSYL 106 Query 120 KYEKSRATKYPNLFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKR 179 Y + + L ++ L E+ ++++++ IL +ASP L R R+ + Sbjct 107 SYTQD----FSFLESMKKRLVNLKEVISRIDQTFLTADEILDTASPRLKEIRDRIRKLES 162 Query 180 KIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIE 239 +I ++L+ +++ I+ LQ+ + +R +LP++A+ ++ ++GI S +G+T+F+E Sbjct 163 RIRDELNSMIRDPKIQRFLQEPIITIRGEKLLLPVKAEFRNEVKGIVHDQSATGATLFVE 222 Query 240 PQALA--MQQAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTK 297 P Q ++ K+Q E+E RIL+E+S ++I +S L + D + + Sbjct 223 PFVCVEISNQIRILKSQEKEEIE--RILQEISSLIASYCDEIETSFYALVELDIVFTKAI 280 Query 298 FAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWV 357 +A ++ KP +N L A+HPL ++ K + D+HL V + Sbjct 281 WAKEMNASKPVINTSGIIN----LKKARHPL--IQKDKVVPIDIHLGKDFD------VLI 328 Query 358 LSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTF 416 ++GPN GGKTV +KTVG+ L+ ++G+F+ D+ +++ ++ IF ++GD Q+ + LSTF Sbjct 329 ITGPNTGGKTVTLKTVGLFCLLCQSGIFIPADEDSQLCIFQKIFADIGDDQSIVQSLSTF 388 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSN 476 S H+ I I++ A++ +L+LLDE GTDP G A+A++ L+Y S K + VI TTH+ Sbjct 389 SAHMKNIIEITKNADDKTLVLLDEIGAGTDPEEGAALAKAILKYLSEKGSKVIATTHYGE 448 Query 477 LKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYY 536 LK A + RF N S EF+ L PTY+LL GIPG+S A+ ++ +GL+ I++ AR Y Sbjct 449 LKIFAQQEDRFENASCEFDVKTLKPTYRLLIGIPGRSNALVISSNLGLDKGIVEMARGYL 508 Query 537 GSESERMENLLKELQLKRIEINEELTKQNLLTQKLDSEFKSLKNEKEQ 584 ++ ++ ++ E++ KR E E L L +KL E ++LK E+ Sbjct 509 SQKTIDLDRIINEMEQKRKEAEENLE----LARKLKLEAQALKAAYEE 552 Range 2: 621 to 785 Score:63.2 bits(152), Expect:8e-09, Method:Compositional matrix adjust., Identities:52/187(28%), Positives:86/187(45%), Gaps:23/187(12%) Query 764 AQQTAKEAQSQGR-SPEFWKPGMSAKSTKLKEKGVVLKTADSKGNIECQFGILKIKIPYH 822 +QQ +EA+S+ + + + + G G V DSKGN+ Q GI+K+ + Sbjct 621 SQQEKQEAESKTKKTLQNIRLGQKVYVRSFDAVGFVESLPDSKGNLTVQIGIMKLNVNIS 680 Query 823 ELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTV 882 ++ E + + Q +S NVK K+ +I + G T Sbjct 681 DI----EEVEEGEKKVYQTTSKNVKLREKSVDL------------------SIDVRGKTS 718 Query 883 DESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGD 942 D+++ +D LD + + +V IIHG G G +++++R L+ FR G +GEG Sbjct 719 DDAILDVDKYLDDAYTSGLRQVTIIHGKGTGVLRQAIRNFLKRHPLVKSFRDGTYGEGEQ 778 Query 943 GVTIVEF 949 GVTIVE Sbjct 779 GVTIVEL 785 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Caldicellulosiruptor bescii DSM 6725] Sequence ID: B9MK78.1 Length: 787 Range 1: 1 to 552 Score:266 bits(679), Expect:3e-75, Method:Compositional matrix adjust., Identities:177/586(30%), Positives:312/586(53%), Gaps:50/586(8%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 + Q L LE++KI + L A +K+ F L P ++ + D+ E Sbjct 1 MNQKTLKALEYDKIVEILKNMAKSTPAKEYFENLIP-------------STNVADIENEL 47 Query 75 NGISLESFDFTL---------FQNFL------QRGALLSPQALYQILITLKLCHSIQSFF 119 N + ES+ + L F+N L + GA L+P + QI LKL + ++++ Sbjct 48 NKVD-ESYRYVLKYGNLPTLEFENILPSLKKSKLGATLNPHEILQIGKVLKLSYEMRTYL 106 Query 120 KYEKSRATKYPNLFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKR 179 + + + L ++ L E+ ++++++ IL +AS +L R ++ + Sbjct 107 SFTQD----FSFLESMKKRLVNLKEVISRIDQTFLTPDEILDTASSKLKEIRDKIRKLEN 162 Query 180 KIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIE 239 KI ++L+ +++ I+ LQ+ + +R +LP++A+ ++ ++GI S +G+T+F+E Sbjct 163 KIRDELNSMIRDPKIQRFLQEPIITIRGEKLLLPVKAEFRNEVKGIVHDQSATGATLFVE 222 Query 240 PQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFA 299 P Q++ +N + E +RIL+E+S E I +S L + D + + +A Sbjct 223 PFVCVEISNQIKILKNQEKEEIERILQEISSLIASYCEVIETSFYALVELDIVFTKAIWA 282 Query 300 GVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLS 359 ++ KP +N L A+HPL ++ K + D+HL V +++ Sbjct 283 KEMNASKPIINASGIIN----LKKARHPL--IQKDKVVPIDIHLGKDFD------VLIIT 330 Query 360 GPNAGGKTVAMKTVGIIALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSG 418 GPN GGKTV +KTVG+ L+ ++G+F+ D+ +E+ ++ IF ++GD Q+ + LSTFS Sbjct 331 GPNTGGKTVTLKTVGLFCLLCQSGIFIPADEGSELCIFQKIFADIGDDQSIVQSLSTFSA 390 Query 419 HLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLK 478 H+ I I++ A++ +L+LLDE GTDP G A+A++ L+Y S K + VI TTH+ LK Sbjct 391 HMKNIIEITKNADDKTLVLLDEIGAGTDPEEGAALAKAILKYLSEKGSKVIATTHYGELK 450 Query 479 TLADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGS 538 A + RF N S EF+ L PTY+LL GIPG+S A+ ++ +GL+ I++ AR Y Sbjct 451 IFAQQEDRFENASCEFDVKTLKPTYRLLIGIPGRSNALVISSNLGLDKGIVEMARGYLSQ 510 Query 539 ESERMENLLKELQLKRIEINEELTKQNLLTQKLDSEFKSLKNEKEQ 584 ++ ++ ++ E++ KR E E L L QKL E ++LK E+ Sbjct 511 KTIDLDRIINEMEQKRKEAEENLE----LAQKLKHEAQALKAAYEE 552 Range 2: 621 to 785 Score:74.3 bits(181), Expect:3e-12, Method:Compositional matrix adjust., Identities:54/187(29%), Positives:89/187(47%), Gaps:23/187(12%) Query 764 AQQTAKEAQSQGR-SPEFWKPGMSAKSTKLKEKGVVLKTADSKGNIECQFGILKIKIPYH 822 +QQ +EA+S+ + + + + G +G V DSKGN+ Q GI+KI + Sbjct 621 SQQVKQEAESKTKKTIQNLRLGQKVYVRSFDAEGFVESLPDSKGNLTVQIGIMKINVNLS 680 Query 823 ELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTV 882 ++ E + Q+S Q +S NV KN +I + G T Sbjct 681 DI----EEVEGQDSKIYQIASRNVIIKEKNIDM------------------SIDVRGKTS 718 Query 883 DESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGD 942 D+++ ++D LD + + +V IIHG G G +++++R L + FR G +GEG Sbjct 719 DDAILEVDKYLDDAYTAGLKQVTIIHGKGTGVLRQAIRNFLRRHPHVKSFRDGTYGEGEQ 778 Query 943 GVTIVEF 949 GVT+VE Sbjct 779 GVTVVEL 785 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Finegoldia magna ATCC 29328] Sequence ID: B0S1P2.1 Length: 783 Range 1: 5 to 538 Score:265 bits(678), Expect:5e-75, Method:Compositional matrix adjust., Identities:173/548(32%), Positives:281/548(51%), Gaps:16/548(2%) Query 19 ALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTE-TNGI 77 L LE+N+I + K ++LEP +E ++ T E + + + +N Sbjct 5 TLNTLEYNEIKNKIEKLCKSKLGKSIANKLEPMIEEDEIRQSLDETYEAMSMIYKFSNPP 64 Query 78 SLESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSN 137 E + + +G + P+ L +I L H I+ + P + + + Sbjct 65 IYEIINVKASIMHVSKGGYIVPEVLLKIGQILNSVHDIKRYAGESDENYENCPMIMAMMD 124 Query 138 DLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNA 197 L +L A +N ++ + I +AS L R I ++++ IL D A Sbjct 125 SLVEEPDLVATINNAIISEDEISDNASRNLARIRQTKRQKTENIRDKINSILSSND--QA 182 Query 198 LQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDV 257 LQ+++ +RD YV+P++ KS +GI S SG TV+IEP + +L + + Sbjct 183 LQENIVTMRDDRYVIPVKVSHKSSFKGIVHDHSSSGQTVYIEPMEVVELNNELRMLEAEE 242 Query 258 EVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNP 317 E RIL+E+S Y V + I ++L++ D I A+ K+A I P+ + N Sbjct 243 REEIIRILKEISDRVYDVKDSIFVDQDVLSKLDFIFAKAKYAIEIDATNPKL----NTNG 298 Query 318 RFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIA 377 F+ NA+HPL L+ KK + ++L V++GPN GGKTV +KTVG+I Sbjct 299 YFNFKNARHPL--LDKKKVVPISIYLGDDYN------TLVITGPNTGGKTVTLKTVGLIT 350 Query 378 LMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLI 436 LMA++G+ + D+ +E+ ++NIF ++GD Q+ E+ LSTFS H+ I I SL+ Sbjct 351 LMAQSGILIPVDENSEVAIFDNIFTDIGDEQSIEQSLSTFSAHMKNIVHIVNNITFNSLV 410 Query 437 LLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEP 496 L DE GTDP G A+A + L F K I TTH+S LK A + NGS+EF+ Sbjct 411 LFDELGAGTDPTEGAALAIAILRIFLYKSIRTIATTHYSQLKIFALTEKYVKNGSVEFDV 470 Query 497 HKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIE 556 + L PTYKL GIPG+S A E++ R+GL+++II A+ E + E++L +++ K+ + Sbjct 471 NTLSPTYKLRIGIPGKSNAFEISRRLGLDDDIINNAKEILSQEDKDFEDVLSDIESKKKQ 530 Query 557 INEELTKQ 564 I+E+ +Q Sbjct 531 IDEDKQRQ 538 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Staphylococcus aureus] Sequence ID: Q9ZEH5.1 Length: 719 Range 1: 11 to 567 Score:264 bits(674), Expect:6e-75, Method:Compositional matrix adjust., Identities:171/573(30%), Positives:316/573(55%), Gaps:28/573(4%) Query 90 FLQR---GALLSPQALYQILITLKLCHSIQSFFK--YEKSRATKYPNLFNLSNDLKPHME 144 F+ R G +L+ L I +++ + ++F+ E+ KYP L + N L + Sbjct 11 FIHRADIGGVLNVSELNLIKRLIQVQNQFKTFYNQLVEEDEGVKYPILDDKMNQLPVLTD 70 Query 145 LHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWM 204 L ++N++ D ++ +AS EL RS++ ++I + LD I+K Q + L D + Sbjct 71 LFQQINETCDT-YDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQANQKKLSDAIVT 129 Query 205 LRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRI 264 +R+ V+P++A+ + GI S SG T++IEP ++ Q+ + ++D +E++RI Sbjct 130 VRNERNVIPVKAEYRQDFNGIVHDQSASGQTLYIEPSSVVEMNNQISRLRHDEAIEKERI 189 Query 265 LRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINA 324 L +L+ + +L + +++ Q D +IA+ +++ I G KP F + R + L A Sbjct 190 LTQLTGYVAADKDALLVAEQVMGQLDFLIAKARYSRSIKGTKPIFKEERTV----YLPKA 245 Query 325 KHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGL 384 HPL L + +AN + + +++GPN GGKTV +KT+G+I +MA++GL Sbjct 246 YHPL--LNRETVVANTIEFMEDIE------TVIITGPNTGGKTVTLKTLGLIIVMAQSGL 297 Query 385 FV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFV 443 + + D +++ ++N++ ++GD Q+ E+ LSTFS H+ I I + A++ SL+L DE Sbjct 298 LIPTLDGSQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGA 357 Query 444 GTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTY 503 GTDP+ G A+A S L++ + V+ TTH+ LK + N N S+EF+ L PTY Sbjct 358 GTDPSEGAALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTY 417 Query 504 KLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQ--LKRIEINE-E 560 KLL G+PG+S A ++++++GL+ NII KA+T G++ + + +++ L+ KR+E E Sbjct 418 KLLMGVPGRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLE 477 Query 561 LTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNAFENRLE--IRE-RQ 617 L + L ++ + L + +Q L+E+ + K +++ A + I++ RQ Sbjct 478 LDR---LVKEAEQVHDDLSKQYQQFQNYEKSLIEDAKEKANQKIKAATKEADDIIKDLRQ 534 Query 618 FEKQKETLLREIHEISHKETIENNLEISQAQQN 650 +QK ++E I K+ ++++ E +QN Sbjct 535 LREQKGADVKEHELIDKKKRLDDHYEAKSIKQN 567 Range 2: 579 to 715 Score:55.1 bits(131), Expect:3e-06, Method:Compositional matrix adjust., Identities:49/163(30%), Positives:77/163(47%), Gaps:26/163(15%) Query 784 GMSAKSTKLKEKGVVLKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSS 843 G K +KG VL+ + + I Q GI+K+K+P +L +K Sbjct 579 GDEVKVLSYGQKGEVLEIVNDEEAI-VQMGIIKMKLPIEDL--------------EKKQK 623 Query 844 LNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDR 903 VKP TK + Q+ + T + L G +++L +LD LD+ + ++ Sbjct 624 EKVKP-TKMVTR----QNRQTIKT------ELDLRGYRYEDALIELDQYLDQAVLSNYEQ 672 Query 904 VVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTI 946 V IIHG G G +++ V++HL+ FRGG EGG GVT+ Sbjct 673 VYIIHGKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTV 715 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Geobacillus kaustophilus HTA426] Sequence ID: Q5KWF8.1 Length: 784 Range 1: 6 to 527 Score:264 bits(674), Expect:2e-74, Method:Compositional matrix adjust., Identities:173/538(32%), Positives:279/538(51%), Gaps:22/538(4%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISL 79 L LE++K+ + LA A+ P + L P +LE+ + T E + + L Sbjct 6 LHTLEFDKVKEQLAEHASSPLGLEKIDALMPSSDLEEVAAWLDETDEAAAVLRLAGYVPL 65 Query 80 ESFDFTLFQNFLQRGAL---LSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLS 136 + + L+R A+ LSPQ L ++ T ++ LF + Sbjct 66 DGV--VDIRPHLKRAAIGGTLSPQELLEVAATSAASRQMKRLIAGLYDEHGGLERLFRYA 123 Query 137 NDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRN 196 + L EL + +S+D G +L +AS L S R ++ + +I E+L+ I++ + Sbjct 124 DTLAEAPELEHDVRRSIDDHGEVLDAASDRLRSLRGQIRSVEARIREKLESIIRSPSAQK 183 Query 197 ALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQND 256 L D + +R+ YV+P++ + + GI S SG+T+FIEPQA+ L +A+ Sbjct 184 RLSDAIITIRNDRYVIPVKQEYRGAYGGIVHDQSASGATLFIEPQAVVELNNALREARAK 243 Query 257 VEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLN 316 + E +RILRELS E + + E L D A+ K+A + KP +N Sbjct 244 EKQEIERILRELSAKVAEQAEPLARTVEALAALDFAFAKAKYARRLQAAKPA------VN 297 Query 317 PR--FSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVG 374 R + A+HPL L+ +K + ND+ L G+ + V++GPN GGKTV +KT+G Sbjct 298 SRGYLRFLQARHPL--LDQEKAVPNDIELG----GDYT--TIVITGPNTGGKTVTLKTIG 349 Query 375 IIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANEL 433 ++ LMA+AGLF+ + D +E + ++F ++GD Q+ E+ LSTFS H+ I I + Sbjct 350 LLTLMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNIVDILRHVDGE 409 Query 434 SLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSME 493 SL+L DE GTDP G A+A + L+ + A + TTH+ LK N N S+E Sbjct 410 SLVLFDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRPGVVNASVE 469 Query 494 FEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQ 551 F+ L PTYKLL GIPG+S A +++ R+GL+ II++A+ +ES +EN++ L+ Sbjct 470 FDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERAKAQVSAESHNVENMIASLE 527 Range 2: 635 to 783 Score:58.9 bits(141), Expect:2e-07, Method:Compositional matrix adjust., Identities:53/173(31%), Positives:79/173(45%), Gaps:24/173(13%) Query 777 SPEFWKPGMSAKSTKLKEKGVVLKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNS 836 S ++PG K T L +KG +++ S + Q GILK+KI +L + Sbjct 635 SRHVFQPGDEVKVTSLNQKGYLIEKV-SDDEWQVQLGILKMKIHERDL--------EYIG 685 Query 837 SSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKM 896 S+P K +V P+ K D+ H + L G +++L +L+ LD Sbjct 686 SAPAK---DVTPIATVKGK-----DA-------HVSLELDLRGERYEDALIRLEKYLDDA 730 Query 897 HRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 RV IIHG G G +++ V++ L+ FR G EGG GVTIVE Sbjct 731 VLAGYARVSIIHGKGTGALRQGVQQFLKQHRAVKSFRFGEANEGGTGVTIVEL 783 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Symbiobacterium thermophilum IAM 14863] Sequence ID: Q67QE3.1 Length: 793 Range 1: 6 to 550 Score:262 bits(670), Expect:8e-74, Method:Compositional matrix adjust., Identities:177/570(31%), Positives:290/570(50%), Gaps:30/570(5%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEP---WLELEDRNFFFTATSEMLDLNTETNG 76 L LE+ KI + LA ++ L P +LE++ R TSE L + Sbjct 6 LRTLEFAKIKEMLAERTATSLGREVVESLAPATDFLEVQHRQ---AETSEARRLYEGGHA 62 Query 77 ISLESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNL 135 I L D RG +L P L + T ++ F + ++ P L L Sbjct 63 IPLGGLHDLRAHVQRAVRGGVLDPGDLLDVADTAASSRRLKRFLEEQEG----LPILTAL 118 Query 136 SNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIR 195 S L L A++ ++VD G + ASP L R + + ++ E+LD ++ + Sbjct 119 SRMLGTFHHLEAEIRQAVDEHGEVRDDASPALAEIRRSMRILQNRMKERLDAFVRGSAAK 178 Query 196 NALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQN 255 LQD + +R+G +V+P++ + ++ + GI S SGST+FIEP A+ L + Sbjct 179 Y-LQDPIVTIREGRFVVPVKIEYRAQVPGIVHDQSASGSTLFIEPMAIVEMNNDLRELAL 237 Query 256 DVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDL 315 E +RIL LS + +L + + + Q D A+ K + + +PE ++ Sbjct 238 KEHEEVERILARLSSLVAGEADALLDTLQAVAQIDFASAKGKLSLDLDCTEPELVR---- 293 Query 316 NPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGI 375 P + +HPL + + D+H+ + V++GPN GGKTVA+KT+G+ Sbjct 294 EPILEIHKGRHPLL---KGRVVPIDVHIG------ITFDTLVITGPNTGGKTVALKTMGL 344 Query 376 IALMAKAGLFVSCDKA-EIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELS 434 LMA+AGL + + ++ +FV++GD Q+ E+ LSTFSGH+ I RI + + Sbjct 345 FVLMAQAGLHLPAGHGTRVGVFQQVFVDIGDEQSIEQSLSTFSGHMTNIIRILDALEGPA 404 Query 435 LILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEF 494 L+LLDE GTDP G A+A S LE+ + A + TTH+S LKT A SR N S+EF Sbjct 405 LVLLDELGAGTDPTEGAALAMSILEHLHKRGAKTVATTHYSELKTYAYTRSRVENASVEF 464 Query 495 EPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKR 554 + L PT++LL G+PG S A E++ R+GL+ +I+ +AR + E ER+E+L++ + R Sbjct 465 DVETLRPTFRLLIGVPGSSNAFEISRRLGLSPHIVDRARQFLTQEQERVEDLIQGIHATR 524 Query 555 IEINEELTKQNLLTQKLDSEFKSLKNEKEQ 584 E+ +E + + +L +E + ++ E E+ Sbjct 525 AELEKERAEAH----RLRAEAQRMREEYER 550 Range 2: 484 to 793 Score:55.1 bits(131), Expect:3e-06, Method:Compositional matrix adjust., Identities:97/364(27%), Positives:154/364(42%), Gaps:71/364(19%) Query 605 NAFE--NRLEI------RERQFEKQK----ETLLREIHEIS---HKETIENNLEISQAQQ 649 NAFE RL + R RQF Q+ E L++ IH KE E + ++AQ+ Sbjct 484 NAFEISRRLGLSPHIVDRARQFLTQEQERVEDLIQGIHATRAELEKERAEAHRLRAEAQR 543 Query 650 NNLSEKNQNKLAPAQKK--EIINTAKPQKLSGFEALSGIKLPKTTSAKSSPNYQSLDEKA 707 + E+ + + AQ+K E + A+ Q + L+ + + A + Q+L E+ Sbjct 544 --MREEYERRYGDAQRKAAETVEKARAQ---AQQILATAR--REAEAVIAELKQALREQR 596 Query 708 ERFRAPKNMSSRSLLDEARMSLQSLKNSFDDIEEQLHDDLDTLQEIEKSTKEKVRSAQQT 767 E R S+RS L AR Q +E + +E+ Sbjct 597 EAERMQAIQSARSRLARAR------------------------QAVEPTEEEQ------- 625 Query 768 AKEAQSQGRSPEFWKPGMSAKSTKLKEKGVVLKTADSKGNIECQFGILKIKIPYHELIPG 827 A+ +G P KPG + L G VL D+ GN+ Q GILK+ + +L Sbjct 626 --RARRRGEVPRGLKPGDKVRVVSLDTTGYVLSEPDADGNVLVQAGILKMTVSLTDLERA 683 Query 828 NETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLD 887 +E P + P + + K L + + E+ P + L G V+E+L+ Sbjct 684 SEEQPAAGAGGPARMRTHGKGLAVSKAR-------EMSPE-------VDLRGLMVEEALE 729 Query 888 KLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIV 947 ++D LD + +V IIHG G G ++++V L +R G GEGGDGVT+ Sbjct 730 RVDKFLDDAVLAGLPQVRIIHGKGTGALRKAVTEALRHDRRVESYRLGGVGEGGDGVTVA 789 Query 948 EFDE 951 + E Sbjct 790 KLRE 793 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Pediococcus pentosaceus ATCC 25745] Sequence ID: Q03ES2.1 Length: 785 Range 1: 6 to 597 Score:262 bits(669), Expect:8e-74, Method:Compositional matrix adjust., Identities:187/609(31%), Positives:327/609(53%), Gaps:26/609(4%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEPWL-ELEDRNFFFTATSEMLDLNTETNGIS 78 L LE++KI Q + F + K EL P E E RN T + +++ NGI Sbjct 6 LDVLEYDKIKQSIRQFIATENGTKELRELVPSSDETEVRNAL-KQTLDAVNIYRLKNGIP 64 Query 79 LESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSN 137 + D T L+ A L+ Q L QI L+ ++ +FF ++ + L + Sbjct 65 VPRLEDVTEALQRLKIDAALNGQELAQIGRILRATRTVINFFDDLENEEIEIIALDQVIE 124 Query 138 DLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNA 197 L E+ +L+ S++ +G++L+SAS EL R+ + + + ++++ + +++ Sbjct 125 QLVTIPEVEERLSNSIEGNGHLLNSASSELRRIRASITRIESDVRSRMEKFTRGNNVK-Y 183 Query 198 LQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDV 257 L + + +R+ YV+P R + +S G+ S SG T+++EP+++ +L + Q Sbjct 184 LSEPIVTIRNERYVIPARVEYRSKFGGVVHDQSSSGQTLYVEPESVVDLNNELRQNQVAE 243 Query 258 EVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNP 317 EEQRIL+ELS + + +S IL D + A+ ++A + +P+ ++N Sbjct 244 VHEEQRILQELSALVAPYTDTLKDNSRILGHLDLLNAKAQYAHQLKATEPQISASNEINL 303 Query 318 RFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIA 377 R A+HPL ++ KK ++ND+ L + + V++GPN GGKT+ +KTVG++ Sbjct 304 R----EARHPL--IDQKKVVSNDIRLGGEYE------TLVITGPNTGGKTITLKTVGLLQ 351 Query 378 LMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLI 436 LMA++G+F+ ++ + ++ +E IF ++GD Q+ E++LSTFS H+ RI NE SL Sbjct 352 LMAQSGMFIPANENSTVRIFEEIFADIGDEQSIEQNLSTFSSHMDNTIRILGNLNERSLA 411 Query 437 LLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEP 496 L DE GTDP G A+A + L+ A + TTH+ LKT N SMEF+ Sbjct 412 LFDELGAGTDPKEGAALAIAILDKVRSTGAVSMTTTHYPELKTYGYERMGTINASMEFDV 471 Query 497 HKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKEL---QLK 553 L PTYKLL GIPGQS A E+++R+GL+++II +AR +S+ + N++K+L Q + Sbjct 472 DTLQPTYKLLLGIPGQSNAFEISKRLGLDSDIISQARGLVDQDSQDLNNMIKDLTTRQKR 531 Query 554 RIEINEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLN---AFENR 610 +IN++ + L ++ + ++L + L+ R +L+E+ + + +N A +R Sbjct 532 AQKINQQAVE---LLKQAEEYHQTLVKGVDSLNSQRSNLIESAKEDANRIVNDSQAEADR 588 Query 611 LEIRERQFE 619 + R R+ E Sbjct 589 IIKRLRKLE 597 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Clostridium perfringens SM101] Sequence ID: Q0SRU6.1 Length: 786 Range 1: 5 to 579 Score:262 bits(669), Expect:8e-74, Method:Compositional matrix adjust., Identities:176/590(30%), Positives:306/590(51%), Gaps:17/590(2%) Query 19 ALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGIS 78 L LE+NKI + + G+A +K+ +L+P+ + D T E LD+ Sbjct 5 VLRVLEFNKIKELVKGYAITKSAKEMVLDLKPYDSVYDVKEHLEETKEALDILMRKGNPP 64 Query 79 LES-FDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSN 137 E +D ++G +LS + L +I L + + F K ++ L + Sbjct 65 FEGLYDVKEAITRAEKGGVLSIEGLLRIGNMLSVTRKLSDFLA-RKEEEEEHRILEGMRE 123 Query 138 DLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNA 197 L + + ++K++ + I SAS +L+S R L+ I ++++ I++ Sbjct 124 GLIVLRGVESAISKAIVSEDEIADSASDKLYSIRRSLKEKNSSIRDKVNSIVRSN--AQY 181 Query 198 LQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDV 257 LQD ++ +R YV+P++A+ KS + G+ S +G+T+FIEP AL ++++ Sbjct 182 LQDSLYTVRGDRYVIPVKAEYKSQVPGLVHDQSSTGATLFIEPTALVNLNNEIKELMLKE 241 Query 258 EVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNP 317 E +RIL ELS Y + I + I+ + D I A+ K+ + G P + Sbjct 242 RAEIERILAELSALVYKNIDVIKVNFNIIVELDFIFAKAKYGSDLGGTMPIV----NEEG 297 Query 318 RFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIA 377 L++A+HPL + K +++D++L + +++GPN GGKTV +KT G+I Sbjct 298 VIDLMDARHPL--IPKDKVVSSDIYLGREFS------TLLITGPNTGGKTVTLKTTGLIE 349 Query 378 LMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLI 436 LM +GL + + + + I +E IF ++GD Q+ E+ LSTFS H+ I +I E+AN S + Sbjct 350 LMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVKIMEKANNKSFV 409 Query 437 LLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEP 496 L DE GTDP G A+A S LE + ++ TTH+S LK A N S+EF Sbjct 410 LFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTENVENASVEFNV 469 Query 497 HKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIE 556 L PTY+LL G+PG+S A E++ R+GL +NII++A+ +ES + E+L++ LQ K I+ Sbjct 470 ETLRPTYRLLIGVPGKSNAFEISRRLGLKDNIIEEAKKVISTESLQFEDLIQSLQEKSIK 529 Query 557 INEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNA 606 + + +L + K + E++ +R ++ + R + ++ L++ Sbjct 530 AENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARREAKQILDS 579 Range 2: 643 to 783 Score:52.0 bits(123), Expect:2e-05, Method:Compositional matrix adjust., Identities:43/164(26%), Positives:76/164(46%), Gaps:23/164(14%) Query 784 GMSAKSTKLKEKGVVLKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSS 843 GM A + +K +VL D+KG ++ Q GI+KI + +L ET ++ +++ Sbjct 643 GMEALLPSINQKVIVLSKPDNKGEVQVQAGIMKINVKAKDLRVAKET-KEEKKIKKREAR 701 Query 844 LNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDR 903 LN++ ++ P+ I L G +E+ D LD + Sbjct 702 LNLR---------------QVDPS-------IDLRGMDSEEACYTADKYLDDAYVAGRGE 739 Query 904 VVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIV 947 V ++HG G G +++++ L+ + R G +GEGG GVT+V Sbjct 740 VTLVHGKGTGVLRKAINDMLKKHPHVKSHRLGEYGEGGTGVTVV 783 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Clostridium perfringens str. 13] Sequence ID: Q8XJ80.1 Length: 786 Range 1: 5 to 579 Score:262 bits(669), Expect:9e-74, Method:Compositional matrix adjust., Identities:176/590(30%), Positives:306/590(51%), Gaps:17/590(2%) Query 19 ALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGIS 78 L LE+NKI + + G+A +K+ +L+P+ + D T E LD+ Sbjct 5 VLRVLEFNKIKELVKGYAITKSAKEMVLDLKPYDSVYDVKEHLEETKEALDILMRKGNPP 64 Query 79 LES-FDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSN 137 E +D ++G +LS + L +I L + + F K ++ L + Sbjct 65 FEGLYDVKEAITRAEKGGVLSIEGLLRIGNMLAVTRKLSDFLA-RKEEEEEHRILEGMRE 123 Query 138 DLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNA 197 L + + ++K++ + I SAS +L+S R L+ I ++++ I++ Sbjct 124 GLIVLRGVESAISKAIVSEDEIADSASDKLYSIRRSLKEKNSSIRDKVNSIVRSNT--QY 181 Query 198 LQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDV 257 LQD ++ +R YV+P++A+ KS + G+ S +G+T+FIEP AL ++++ Sbjct 182 LQDSLYTVRGDRYVIPVKAEYKSQVPGLVHDQSSTGATLFIEPTALVNLNNEIKELMLKE 241 Query 258 EVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNP 317 E +RIL ELS Y + I + I+ + D I A+ K+ + G P + Sbjct 242 RAEIERILAELSVLVYKNIDVIKVNFNIIVELDFIFAKAKYGSDLGGTLPIV----NEEG 297 Query 318 RFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIA 377 L++A+HPL + K +++D++L + +++GPN GGKTV +KT G+I Sbjct 298 VIDLMDARHPL--IPKDKVVSSDIYLGREFS------TLLITGPNTGGKTVTLKTTGLIE 349 Query 378 LMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLI 436 LM +GL + + + + I +E IF ++GD Q+ E+ LSTFS H+ I RI E+AN S + Sbjct 350 LMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVRIMEKANNKSFV 409 Query 437 LLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEP 496 L DE GTDP G A+A S LE + ++ TTH+S LK A N S+EF Sbjct 410 LFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTENVENASVEFNV 469 Query 497 HKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIE 556 L PTY+LL G+PG+S A E++ R+GL +N+I++A+ +ES + E+L++ LQ K I+ Sbjct 470 ETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFEDLIQSLQEKSIK 529 Query 557 INEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNA 606 + + +L + K + E++ +R ++ + R + ++ L++ Sbjct 530 AENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARREAKQILDS 579 Range 2: 643 to 783 Score:52.0 bits(123), Expect:2e-05, Method:Compositional matrix adjust., Identities:43/164(26%), Positives:76/164(46%), Gaps:23/164(14%) Query 784 GMSAKSTKLKEKGVVLKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSS 843 GM A + +K +VL D+KG ++ Q GI+KI + +L ET ++ +++ Sbjct 643 GMEALLPSINQKVIVLSKPDNKGEVQVQAGIMKINVKAKDLRVAKET-KEEKKIKKREAR 701 Query 844 LNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDR 903 LN++ ++ P+ I L G +E+ D LD + Sbjct 702 LNLR---------------QVDPS-------IDLRGMDSEEACYTADKYLDDAYVAGRGE 739 Query 904 VVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIV 947 V ++HG G G +++++ L+ + R G +GEGG GVT+V Sbjct 740 VTLVHGKGTGVLRKAINDMLKKHPHVKSHRLGEYGEGGTGVTVV 783 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Clostridium perfringens ATCC 13124] Sequence ID: Q0TP77.1 Length: 786 Range 1: 5 to 579 Score:262 bits(669), Expect:1e-73, Method:Compositional matrix adjust., Identities:175/590(30%), Positives:306/590(51%), Gaps:17/590(2%) Query 19 ALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGIS 78 L LE+NKI + + G+A +K+ +L+P+ + D T E LD+ Sbjct 5 VLRVLEFNKIKELVKGYAITKSAKEMVLDLKPYDSVYDVKEHLEETKEALDILMRKGNPP 64 Query 79 LES-FDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSN 137 E +D ++G +LS + L +I L + + F K ++ L + Sbjct 65 FEGLYDVKEAITRAEKGGVLSIEGLLRIGNMLSVTRKLSDFLA-RKEEEEEHRILEGMRE 123 Query 138 DLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNA 197 L + + ++K++ + I SAS +L+S R L+ I ++++ I++ Sbjct 124 GLIVLRGVESAISKAIVSEDEIADSASDKLYSIRRSLKEKNSSIRDKVNSIVRSN--AQY 181 Query 198 LQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDV 257 LQD ++ +R YV+P++A+ KS + G+ S +G+T+FIEP AL ++++ Sbjct 182 LQDSLYTVRGDRYVIPVKAEYKSQVPGLVHDQSSTGATLFIEPTALVNLNNEIKELMLKE 241 Query 258 EVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNP 317 E +RIL ELS Y + I + I+ + D I A+ K+ + G P + Sbjct 242 RAEIERILAELSALVYKNIDVIKVNFNIIVELDFIFAKAKYGSDLGGTMPIV----NEEG 297 Query 318 RFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIA 377 L++A+HPL + K +++D++L + +++GPN GGKTV +KT G+I Sbjct 298 VIDLMDARHPL--IPKDKVVSSDIYLGREFS------TLLITGPNTGGKTVTLKTTGLIE 349 Query 378 LMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLI 436 LM +GL + + + + I +E IF ++GD Q+ E+ LSTFS H+ I +I E+AN S + Sbjct 350 LMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVKIMEKANNKSFV 409 Query 437 LLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEP 496 L DE GTDP G A+A S LE + ++ TTH+S LK A N S+EF Sbjct 410 LFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTENVENASVEFNV 469 Query 497 HKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIE 556 L PTY+LL G+PG+S A E++ R+GL +N+I++A+ +ES + E+L++ LQ K I+ Sbjct 470 ETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFEDLIQSLQEKSIK 529 Query 557 INEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNA 606 + + +L + K + E++ +R ++ + R + ++ L++ Sbjct 530 AENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARREAKQILDS 579 Range 2: 643 to 783 Score:52.4 bits(124), Expect:2e-05, Method:Compositional matrix adjust., Identities:43/164(26%), Positives:76/164(46%), Gaps:23/164(14%) Query 784 GMSAKSTKLKEKGVVLKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSS 843 GM A + +K +VL D+KG ++ Q GI+KI + +L ET ++ +++ Sbjct 643 GMEALLPSINQKVIVLSKPDNKGEVQVQAGIMKINVKAKDLRVAKET-KEEKKIKKREAR 701 Query 844 LNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDR 903 LN++ ++ P+ I L G +E+ D LD + Sbjct 702 LNLR---------------QVDPS-------IDLRGMDSEEACYTADKYLDDAYVAGRGE 739 Query 904 VVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIV 947 V ++HG G G +++++ L+ + R G +GEGG GVT+V Sbjct 740 VTLVHGKGTGVLRKAINDMLKKHPHVKSHRLGEYGEGGTGVTVV 783 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Sequence ID: Q03VG8.1 Length: 800 Range 1: 1 to 633 Score:261 bits(667), Expect:2e-73, Method:Compositional matrix adjust., Identities:193/660(29%), Positives:334/660(50%), Gaps:44/660(6%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 + Q L LE++KI L+ F + P ++ L+P ++ N++ T++ + ++ Sbjct 1 MNQKVLQTLEYDKIKSQLSDFLSTPIGRQEADALQPITDVHIINYWLQETADAMMIDRLK 60 Query 75 NGISLESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFF--KYEKSRATKYPN 131 GI L D T L A LS L +I L+ +I +FF ++S Sbjct 61 GGIPLAKLADITPHLKRLNIQASLSATELAEIGNVLRNTSAISNFFIQMKDESIGESLEV 120 Query 132 LFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKK 191 L + L+ E+ + ++D G I AS EL S R ++ + I ++ E K Sbjct 121 LIEQAEQLETLPEVTKSIQTAIDSTGRINDEASYELKSVRGKIVGHENAIKNKMQEFTKG 180 Query 192 QDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLE 251 + + L D + +R YVLP++A+ +S G+ SQ+G T++IEPQA+ +L Sbjct 181 KTAQY-LSDPIVTIRSDRYVLPVKAEYRSQFGGVVHDQSQTGLTLYIEPQAVVELSNKLS 239 Query 252 KAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLK 311 + + EEQR+L+ELS + +I + +IL FD + A+ + A + ++P Sbjct 240 ELRVKESAEEQRVLQELSAELEPHTNEIQQNVQILGHFDFVNAKARLAARLDAMQPTV-- 297 Query 312 PRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMK 371 + SL A HPL L+ K +AND+ L S +++GPN GGKT+ +K Sbjct 298 --SVENHISLRQAWHPL--LDKKIAVANDISLGD------SYKTIIITGPNTGGKTITIK 347 Query 372 TVGIIALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQA 430 T+G++ LMA++GLF++ + + I ++ +F ++GD Q+ E++LSTFS H+A I + + Sbjct 348 TLGLLQLMAQSGLFITTRQPSTIGIFDEVFADIGDEQSIEQNLSTFSSHMANIVSMLDHI 407 Query 431 NELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNG 490 ++ +L++ DE GTDPA G A+A + L+ + A I TTH+ LK N N Sbjct 408 DDKTLVIFDELGAGTDPAEGAALAIAILDKVASLGAYTIATTHYPELKLYGYNRPETKNA 467 Query 491 SMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKEL 550 SM F+ L PTY+ L G+PGQS A+ +A+R+G ++I A + + N++ +L Sbjct 468 SMVFDVETLQPTYQFLMGVPGQSNALAIAKRLGFGEDVIGAAMALTDESDQDLNNMIADL 527 Query 551 QLKRIEI---NEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNAF 607 +R E+ NEEL Q T++ + ++L E+ +L + R ++ + +N+ + A Sbjct 528 VAQRDEVKKNNEELRSQLKATEE---KSEALSEEQSKLEKERAHVILDAKNEANHIVAA- 583 Query 608 ENRLEIRERQFEKQKETLLREIH----------EISHKETIENNLEISQAQQNNLSEKNQ 657 +KQ E L+ EI E++ +E ++ Q +QN+ EKN+ Sbjct 584 ----------TKKQAEQLISEIRKERLRAGQRGELTEQELQARKGKLDQLRQNDSLEKNK 633 Range 2: 646 to 799 Score:42.7 bits(99), Expect:0.015, Method:Compositional matrix adjust., Identities:39/167(23%), Positives:68/167(40%), Gaps:13/167(7%) Query 783 PGMSAKSTKLKEKGVVLKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKS 842 PG ++G ++K G E + GILK+ + +++ T+ Q + +K Sbjct 646 PGDEITVRSYSQQGTLVKK-HKNGQWEVEMGILKMLVDEDDIVKTEATVKAQKGKAKKKQ 704 Query 843 SLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVD 902 ++ T + +++ S + L G + +L +LD LD ++ Sbjct 705 QKIIRKTTSSGSTRASVKSS------------LDLRGVRYEAALTELDRYLDTAVLANIS 752 Query 903 RVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 V IIHG G G +++ V L + GGDG TIVE Sbjct 753 PVEIIHGKGTGALRQGVTEFLRSDRRVKSYHFASANAGGDGATIVEL 799 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Ligilactobacillus salivarius UCC118] Sequence ID: Q1WT38.1 Length: 786 Range 1: 1 to 569 Score:261 bits(666), Expect:3e-73, Method:Compositional matrix adjust., Identities:180/584(31%), Positives:301/584(51%), Gaps:26/584(4%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 + + L LE++K+ Q L F T K+ +LEP + ++ + T + D+ Sbjct 1 MNKKVLKTLEYDKVKQNLYAFTTTSMGKRLIDKLEPSSDYDEISNSLAQTKDGADILRIK 60 Query 75 NGISLESFDFTLFQNFLQR---GALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPN 131 GI + + ++FL+R G L+ + L I L+ + + FFK K Sbjct 61 GGIPVP--NLISIKSFLKRLDIGGTLNSKELAAIGRVLRATNEVNRFFKDLADNKIKLEV 118 Query 132 LFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKK 191 LF+ L+ E+ KL S++ DG++ AS L S R ++ + I E+L+ + Sbjct 119 LFDDVAKLESLPEISKKLLVSIENDGHVTDDASTLLKSIRQQISVTEETIRERLNAYTRG 178 Query 192 QDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLE 251 + + L + V +R+ YVLP++ + +S GI S SG T+F+EP + +L Sbjct 179 TNSK-YLSNAVVTIRNERYVLPVKQEYRSKFGGIVHDQSSSGQTLFVEPAVIVELNNRLR 237 Query 252 KAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLK 311 + Q E RIL ELSK+ ++ ++++IL D I A+ K+A I +P K Sbjct 238 QQQVAEREEINRILEELSKELAPYTHELNNNAKILGMLDFINAKAKYAHSIKATEPILSK 297 Query 312 PRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMK 371 D+ R HPL L+ KK + ND+ + Q V++GPN GGKT+ +K Sbjct 298 ENDVYLR----QVWHPL--LDMKKAVKNDIMIGKDYQA------IVITGPNTGGKTITLK 345 Query 372 TVGIIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQA 430 T+G++ LM ++GL++ + +++ I +++IF ++GD Q+ E+ LSTFS H+ I I + Sbjct 346 TLGLVQLMGQSGLYIPAFEESRIGIFDDIFADIGDEQSIEQSLSTFSSHMTNIVEILKGI 405 Query 431 NELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNG 490 +E SL+L DE GTDP G A+A S L+ K + V+ TTH+ LK N Sbjct 406 DEKSLVLFDELGAGTDPQEGAALAISILDAVGAKGSYVVATTHYPELKAYGFERPNTINA 465 Query 491 SMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKEL 550 SMEF+ + L PTY+LL GIPG+S A ++++R+GL+ I+ AR +S+ + ++ +L Sbjct 466 SMEFDANTLQPTYRLLIGIPGRSNAFDISQRLGLDKMIVMAARQLTSQDSQDLNEMISDL 525 Query 551 QLKRIEINEE-------LTKQNLLTQKLDSEFKSLKNEKEQLSE 587 KR + E+ L + L L++ F + +KE + E Sbjct 526 VAKRHDAEEKEIMYRKYLREAEELHHDLETNFHQFERQKENMLE 569 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Bacillus velezensis FZB42] Sequence ID: A7Z7E7.1 Length: 785 Range 1: 1 to 550 Score:259 bits(662), Expect:9e-73, Method:Compositional matrix adjust., Identities:174/580(30%), Positives:300/580(51%), Gaps:39/580(6%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 ++Q L+ LE++K+ + + A ++ +L+P +L D + LD E Sbjct 1 MQQKVLSSLEFHKVKEQITAHAASSLGREKLLQLKPLTDLSD-------IQKQLDEVEEA 53 Query 75 NGI----SLESFD-FTLFQNFLQR---GALLSPQALYQILITLKLCHSIQSFFKYEKSRA 126 + + F T ++ L+R G++L+P ++ L ++ F Sbjct 54 SAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAVKQMKHFISQMTEDG 113 Query 127 TKYPNLFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLD 186 P + + +L +L ++N +D G +L ASP L R++L + ++ ++L+ Sbjct 114 VGIPLIQAHAEELITLGDLEREINSCIDDHGEVLDHASPALRGIRTQLRTLESRVRDRLE 173 Query 187 EILKKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQ 246 +L+ L D + +R+ +V+P++ + +S GI S SG+T+FIEPQA+ Sbjct 174 SMLRSSSASKMLSDTIVTIRNDRFVIPVKQEYRSSYGGIVHDTSSSGATLFIEPQAIVDM 233 Query 247 QAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIK 306 L++A+ + E +RILR L++ ++I E+L D I A+ ++A + K Sbjct 234 NNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQDVEVLQTLDFIFAKARYAKAMKATK 293 Query 307 PEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGK 366 P + + L A+HPL L + +AND+ L G+ S V++GPN GGK Sbjct 294 PLM----NGDGFIRLKKARHPL--LPQDQVVANDIELG----GDYS--TIVITGPNTGGK 341 Query 367 TVAMKTVGIIALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKR 425 TV +KT+G++ +MA+AGL + D+ +E ++N+F ++GD Q+ E+ LSTFS H+ I Sbjct 342 TVTLKTLGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVN 401 Query 426 ISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDS 485 I + +E SL+L DE GTDP G A+A S L+ A V+ TTH+ LK N Sbjct 402 ILKDVSENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQ 461 Query 486 RFFNGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMEN 545 N S+EF+ L PTYKLL G+PG+S A E++ R+GL +II +A++ +E ++ Sbjct 462 GVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEMTAEHNEVDL 521 Query 546 LLKELQLKRIEINEELTKQNLLTQKLDSEFKSLKNEKEQL 585 ++ L+ + +EEL SE +S++ E E+L Sbjct 522 MIASLEKSKKRADEEL-----------SETESIRKEAEKL 550 Range 2: 639 to 784 Score:52.4 bits(124), Expect:2e-05, Method:Compositional matrix adjust., Identities:53/170(31%), Positives:77/170(45%), Gaps:25/170(14%) Query 781 WKPGMSAKSTKLKEKGVVL-KTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSP 839 KPG K +KG +L KT + + N+ Q GILK+K+ +L E L Sbjct 639 LKPGDEVKVLTFGQKGALLEKTGEKEWNV--QIGILKMKVKEKDL----EFLKSAPEPKK 692 Query 840 QKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRM 899 +K+ VK K YH +L+ + L G + +L +++ LD Sbjct 693 EKAITAVKG-----KDYH--------VSLE-----LDLRGERYENALSRVEKYLDDAVLA 734 Query 900 DVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 RV IIHG G G +++ V+ L++ R G GEGG GVTIVE Sbjct 735 GHPRVSIIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTIVEL 784 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Bacillus cereus B4264] Sequence ID: B7HF67.1 Length: 786 Range 1: 81 to 527 Score:258 bits(660), Expect:1e-72, Method:Compositional matrix adjust., Identities:153/464(33%), Positives:264/464(56%), Gaps:23/464(4%) Query 94 GALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDLKPHMELHAKLNKSV 153 G++LSP L I T+ +++ F + + P L + +L K+ + Sbjct 81 GSMLSPNELLDIANTMYGSRNMKRFIEDMADNGVELPILETHVAQIVSLYDLEKKITNCI 140 Query 154 DMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLP 213 G ++ SAS +L R+++ A+ +I E+L+ + + + + L D + +R+ YV+P Sbjct 141 GDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRSSNAQKMLSDSIVTIRNERYVIP 200 Query 214 IRADRKSGIEGIPRGVSQSGSTVFIEPQAL-----AMQQAQLEKAQNDVEVEEQRILREL 268 ++ + + GI S SG T+FIEPQ + A+Q+A++++ Q E +RIL L Sbjct 201 VKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQ-----EIERILLML 255 Query 269 SKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPL 328 +++ + + +LS+ E++ D I A+ +A I KP R ++ R A+HPL Sbjct 256 TEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYMDLR----QARHPL 311 Query 329 FLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 ++ + + N++ L V++GPN GGKTV +KTVGI LMA++GL + Sbjct 312 --IDPEIIVPNNIMLGKDFT------TIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPV 363 Query 389 -DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDP 447 D++EI ++NIF ++GD Q+ E+ LSTFS H+ I I E+A+ SL+L DE GTDP Sbjct 364 MDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDP 423 Query 448 AIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLN 507 G A+A S L+ + A V+ TTH+ LK N + N S+EF+ + L PTYKLL Sbjct 424 QEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLI 483 Query 508 GIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQ 551 G+PG+S A E+++R+GL++ +I++AR + +++ ++EN++ +L+ Sbjct 484 GVPGRSNAFEISKRLGLSDRVIEQARNHISTDTNKIENMIAKLE 527 Range 2: 594 to 785 Score:50.1 bits(118), Expect:1e-04, Method:Compositional matrix adjust., Identities:56/217(26%), Positives:97/217(44%), Gaps:42/217(19%) Query 750 LQEIEKSTKEKVRSAQQTAKEAQSQGRSPEFWK----------------PGMSAKSTKLK 793 L+++ K+ V+ + +++ +G +PE K G K Sbjct 594 LRQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQKVNVKNTAPKQQLRAGDEVKVLTFG 653 Query 794 EKGVVL-KTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKN 852 +KG +L K +D++ ++ Q GILK+K+ + N PKQ + +K+ VK Sbjct 654 QKGQLLEKVSDTEWSV--QIGILKMKVKESNMEYIN--TPKQ---TEKKAVATVKG---- 702 Query 853 FKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGM 912 + YH +L+ + L G + ++ +++ LD RV IIHG G Sbjct 703 -RDYH--------VSLE-----LDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGT 748 Query 913 GKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 G +++ V+ +L+ FR G GEGG GVT+VE Sbjct 749 GALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVEL 785 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Bacillus cereus AH187] Sequence ID: B7HRJ3.1 Length: 786 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Bacillus cereus Q1] Sequence ID: B9J054.1 Length: 786 Range 1: 81 to 527 Score:258 bits(659), Expect:2e-72, Method:Compositional matrix adjust., Identities:153/464(33%), Positives:264/464(56%), Gaps:23/464(4%) Query 94 GALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDLKPHMELHAKLNKSV 153 G++LSP L I T+ +++ F + + P L + +L K+ + Sbjct 81 GSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPILATHVAQIVSLYDLEKKITNCI 140 Query 154 DMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLP 213 G ++ SAS +L R+++ A+ +I E+L+ + + + + L D + +R+ YV+P Sbjct 141 GDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRSSNAQKMLSDSIVTIRNERYVIP 200 Query 214 IRADRKSGIEGIPRGVSQSGSTVFIEPQAL-----AMQQAQLEKAQNDVEVEEQRILREL 268 ++ + + GI S SG T+FIEPQ + A+Q+A++++ Q E +RIL L Sbjct 201 VKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQ-----EIERILLML 255 Query 269 SKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPL 328 +++ + + +LS+ E++ D I A+ +A I KP R ++ L A+HPL Sbjct 256 TEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYMD----LKQARHPL 311 Query 329 FLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 ++ + + N++ L V++GPN GGKTV +KTVGI LMA++GL + Sbjct 312 --IDPEIIVPNNIMLGKDFT------TIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPV 363 Query 389 -DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDP 447 D++EI ++NIF ++GD Q+ E+ LSTFS H+ I I E+A+ SL+L DE GTDP Sbjct 364 MDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDP 423 Query 448 AIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLN 507 G A+A S L+ + A V+ TTH+ LK N + N S+EF+ + L PTYKLL Sbjct 424 QEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLI 483 Query 508 GIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQ 551 G+PG+S A E+++R+GL++ +I++AR + +++ ++EN++ +L+ Sbjct 484 GVPGRSNAFEISKRLGLSDRVIEQARNHISTDTNKIENMIAKLE 527 Range 2: 594 to 785 Score:50.1 bits(118), Expect:9e-05, Method:Compositional matrix adjust., Identities:56/217(26%), Positives:97/217(44%), Gaps:42/217(19%) Query 750 LQEIEKSTKEKVRSAQQTAKEAQSQGRSPEFWK----------------PGMSAKSTKLK 793 L+++ K+ V+ + +++ +G +PE K G K Sbjct 594 LRQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQKVNVKNTAPKQQLRAGDEVKVLTFG 653 Query 794 EKGVVL-KTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKN 852 +KG +L K +D++ ++ Q GILK+K+ + N PKQ + +K+ VK Sbjct 654 QKGQLLEKVSDTEWSV--QIGILKMKVKESNMEYIN--TPKQ---TEKKAVATVKG---- 702 Query 853 FKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGM 912 + YH +L+ + L G + ++ +++ LD RV IIHG G Sbjct 703 -RDYH--------VSLE-----LDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGT 748 Query 913 GKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 G +++ V+ +L+ FR G GEGG GVT+VE Sbjct 749 GALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVEL 785 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Bacillus cereus ATCC 10987] Sequence ID: Q72ZJ0.1 Length: 786 Range 1: 81 to 527 Score:258 bits(658), Expect:3e-72, Method:Compositional matrix adjust., Identities:153/464(33%), Positives:263/464(56%), Gaps:23/464(4%) Query 94 GALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDLKPHMELHAKLNKSV 153 G++LSP L I T+ +++ F + P L + +L K+ + Sbjct 81 GSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVDLPILETHVAQIVSLYDLEKKITNCI 140 Query 154 DMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLP 213 G ++ SAS +L R+++ A+ +I E+L+ + + + + L D + +R+ YV+P Sbjct 141 GDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRSSNAQKMLSDSIVTIRNERYVIP 200 Query 214 IRADRKSGIEGIPRGVSQSGSTVFIEPQAL-----AMQQAQLEKAQNDVEVEEQRILREL 268 ++ + + GI S SG T+FIEPQ + A+Q+A++++ Q E +RIL L Sbjct 201 VKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQ-----EIERILLML 255 Query 269 SKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPL 328 +++ + + +LS+ E++ D I A+ +A I KP R ++ R A+HPL Sbjct 256 TEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYMDLR----QARHPL 311 Query 329 FLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 ++ + + N++ L V++GPN GGKTV +KTVGI LMA++GL + Sbjct 312 --IDPEVIVPNNIMLGKDFT------TIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPV 363 Query 389 -DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDP 447 D++EI ++NIF ++GD Q+ E+ LSTFS H+ I I E+A+ SL+L DE GTDP Sbjct 364 MDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDP 423 Query 448 AIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLN 507 G A+A S L+ + A V+ TTH+ LK N + N S+EF+ + L PTYKLL Sbjct 424 QEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLI 483 Query 508 GIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQ 551 G+PG+S A E+++R+GL++ +I++AR + +++ ++EN++ +L+ Sbjct 484 GVPGRSNAFEISKRLGLSDRVIEQARNHISTDTNKIENMIAKLE 527 Range 2: 594 to 785 Score:50.4 bits(119), Expect:6e-05, Method:Compositional matrix adjust., Identities:56/217(26%), Positives:98/217(45%), Gaps:42/217(19%) Query 750 LQEIEKSTKEKVRSAQQTAKEAQSQGRSPEFWK----------------PGMSAKSTKLK 793 L+++ K+ V+ + +++ +G +PE K G K Sbjct 594 LRQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQKVNVKNTAPKQQLRAGDEVKVLTFG 653 Query 794 EKGVVL-KTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKN 852 +KG +L K +D++ ++ Q GILK+K+ ++ N PKQ + +K+ VK Sbjct 654 QKGQLLEKVSDTEWSV--QIGILKMKVKESDMEYIN--TPKQ---TEKKAVATVKG---- 702 Query 853 FKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGM 912 + YH +L+ + L G + ++ +++ LD RV IIHG G Sbjct 703 -RDYH--------VSLE-----LDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGT 748 Query 913 GKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 G +++ V+ +L+ FR G GEGG GVT+VE Sbjct 749 GALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVEL 785 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Bacillus mycoides KBAB4] Sequence ID: A9VJL2.1 Length: 786 Range 1: 81 to 527 Score:258 bits(658), Expect:3e-72, Method:Compositional matrix adjust., Identities:153/464(33%), Positives:263/464(56%), Gaps:23/464(4%) Query 94 GALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDLKPHMELHAKLNKSV 153 G++LSP L +I T+ ++ F + P L + +L K+ + Sbjct 81 GSMLSPHELIEIASTMYGSRQMKRFIDDMIDNGVELPILETHVAQIVSLYDLEKKITNCI 140 Query 154 DMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLP 213 G ++ SAS +L R+++ A+ +I E+L+ + + + + L D + +R+ YV+P Sbjct 141 GDGGEVVDSASDKLRGIRNQIRTAESRIREKLENMTRSSNAQKMLSDAIVTIRNERYVIP 200 Query 214 IRADRKSGIEGIPRGVSQSGSTVFIEPQAL-----AMQQAQLEKAQNDVEVEEQRILREL 268 ++ + + GI S SG T+FIEPQ + A+Q+A++++ Q E +RIL L Sbjct 201 VKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQ-----EVERILMML 255 Query 269 SKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPL 328 +++ + + +LS+ E++ D I A+ +A I KP R ++ L A+HPL Sbjct 256 TEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATKPIVNNERYMD----LKQARHPL 311 Query 329 FLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 ++ + + N++ L V++GPN GGKTV +KTVGI LMA++GL + Sbjct 312 --IDPEIIVPNNIMLGKDFT------TIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPV 363 Query 389 -DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDP 447 D++EI ++NIF ++GD Q+ E++LSTFS H+ I I E+A+ SL+L DE GTDP Sbjct 364 MDESEICVFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDP 423 Query 448 AIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLN 507 G A+A S L+ + A V+ TTH+ LK N + N S+EF+ + L PTYKLL Sbjct 424 QEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLI 483 Query 508 GIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQ 551 G+PG+S A E+++R+GL++ +I +AR + +++ ++EN++ +L+ Sbjct 484 GVPGRSNAFEISKRLGLSDRVIDRARNHISTDTNKIENMIAKLE 527 Range 2: 641 to 785 Score:48.1 bits(113), Expect:4e-04, Method:Compositional matrix adjust., Identities:48/170(28%), Positives:82/170(48%), Gaps:26/170(15%) Query 781 WKPGMSAKSTKLKEKGVVL-KTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSP 839 + G K +KG +L K +D++ ++ Q GILK+K+ + N PKQ + Sbjct 641 LRSGDEVKVLTFGQKGQLLEKVSDTEWSV--QIGILKMKVKESNMEYIN--TPKQ---TE 693 Query 840 QKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRM 899 +K+ +VK + YH +L+ + L G ++++ +++ LD Sbjct 694 KKAVASVKG-----RDYH--------VSLE-----LDLRGERYEDAMMRVEKYLDDAQLA 735 Query 900 DVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 RV IIHG G G +++ V+ +L+ +R G GEGG GVT+VE Sbjct 736 SYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTYRYGDMGEGGLGVTVVEL 785 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Bacillus cereus AH820] Sequence ID: B7JR57.1 Length: 786 Range 1: 81 to 527 Score:258 bits(658), Expect:3e-72, Method:Compositional matrix adjust., Identities:153/464(33%), Positives:263/464(56%), Gaps:23/464(4%) Query 94 GALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDLKPHMELHAKLNKSV 153 G++LSP L I T+ +++ F + + P L + +L K+ + Sbjct 81 GSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPILETHVAQIVSLYDLEKKITNCI 140 Query 154 DMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLP 213 G ++ SAS +L R+++ A+ +I E+L+ + + + + L D + +R+ YV+P Sbjct 141 GDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRSSNAQKMLSDSIVTIRNERYVIP 200 Query 214 IRADRKSGIEGIPRGVSQSGSTVFIEPQAL-----AMQQAQLEKAQNDVEVEEQRILREL 268 ++ + + GI S SG T+FIEPQ + A+Q+A++++ Q E +RIL L Sbjct 201 VKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQ-----EIERILLML 255 Query 269 SKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPL 328 +++ + + +LS+ E++ D I A+ +A I KP R ++ R A+HPL Sbjct 256 TEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYMDLR----QARHPL 311 Query 329 FLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 ++ + + N++ L V++GPN GGKTV +KTVGI LMA++GL + Sbjct 312 --IDPEVIVPNNIMLGKDFT------TIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPV 363 Query 389 -DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDP 447 D++EI ++NIF ++GD Q+ E+ LSTFS H+ I I E+A+ SL+L DE GTDP Sbjct 364 MDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDP 423 Query 448 AIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLN 507 G A+A S L+ + A V+ TTH+ LK N + N S+EF+ + L PTYKLL Sbjct 424 QEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLI 483 Query 508 GIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQ 551 G+PG+S A E+++R+GL++ +I +AR + +++ ++EN++ +L+ Sbjct 484 GVPGRSNAFEISKRLGLSDRVIDQARNHISTDTNKIENMIAKLE 527 Range 2: 594 to 785 Score:49.7 bits(117), Expect:1e-04, Method:Compositional matrix adjust., Identities:56/217(26%), Positives:97/217(44%), Gaps:42/217(19%) Query 750 LQEIEKSTKEKVRSAQQTAKEAQSQGRSPEFWK----------------PGMSAKSTKLK 793 L+++ K+ V+ + +++ +G +PE K G K Sbjct 594 LRQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQKVNVKNTSPKQQLRAGDEVKVLTFG 653 Query 794 EKGVVL-KTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKN 852 +KG +L K +D++ ++ Q GILK+K+ + N PKQ + +K+ VK Sbjct 654 QKGQLLEKVSDTEWSV--QIGILKMKVKESNMEYIN--TPKQ---TEKKAVATVKG---- 702 Query 853 FKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGM 912 + YH +L+ + L G + ++ +++ LD RV IIHG G Sbjct 703 -RDYH--------VSLE-----LDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGT 748 Query 913 GKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 G +++ V+ +L+ FR G GEGG GVT+VE Sbjct 749 GALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVEL 785 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Bacillus cereus E33L] Sequence ID: Q633P2.1 Length: 786 Range 1: 81 to 527 Score:258 bits(658), Expect:3e-72, Method:Compositional matrix adjust., Identities:153/464(33%), Positives:263/464(56%), Gaps:23/464(4%) Query 94 GALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDLKPHMELHAKLNKSV 153 G++LSP L I T+ +++ F + + P L + +L K+ + Sbjct 81 GSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPILETHVAQIVSLYDLEKKITNCI 140 Query 154 DMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLP 213 G ++ SAS +L R+++ A+ +I E+L+ + + + + L D + +R+ YV+P Sbjct 141 GDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRSSNAQKMLSDSIVTIRNERYVIP 200 Query 214 IRADRKSGIEGIPRGVSQSGSTVFIEPQAL-----AMQQAQLEKAQNDVEVEEQRILREL 268 ++ + + GI S SG T+FIEPQ + A+Q+A++++ Q E +RIL L Sbjct 201 VKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQ-----EIERILLML 255 Query 269 SKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPL 328 +++ + + +LS+ E++ D I A+ +A I KP R ++ R A+HPL Sbjct 256 TEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYMDLR----QARHPL 311 Query 329 FLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 ++ + + N++ L V++GPN GGKTV +KTVGI LMA++GL + Sbjct 312 --IDPEVIVPNNIMLGKDFT------TIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPV 363 Query 389 -DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDP 447 D++EI ++NIF ++GD Q+ E+ LSTFS H+ I I E+A+ SL+L DE GTDP Sbjct 364 MDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDP 423 Query 448 AIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLN 507 G A+A S L+ + A V+ TTH+ LK N + N S+EF+ + L PTYKLL Sbjct 424 QEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLI 483 Query 508 GIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQ 551 G+PG+S A E+++R+GL++ +I +AR + +++ ++EN++ +L+ Sbjct 484 GVPGRSNAFEISKRLGLSDRVIDQARNHISTDTNKIENMIAKLE 527 Range 2: 594 to 785 Score:49.7 bits(117), Expect:1e-04, Method:Compositional matrix adjust., Identities:56/217(26%), Positives:97/217(44%), Gaps:42/217(19%) Query 750 LQEIEKSTKEKVRSAQQTAKEAQSQGRSPEFWK----------------PGMSAKSTKLK 793 L+++ K+ V+ + +++ +G +PE K G K Sbjct 594 LRQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQKVNVKNTAPKQQLRAGDEVKVLTFG 653 Query 794 EKGVVL-KTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKN 852 +KG +L K +D++ ++ Q GILK+K+ + N PKQ + +K+ VK Sbjct 654 QKGQLLEKVSDTEWSV--QIGILKMKVKESNMEYIN--TPKQ---TEKKAVATVKG---- 702 Query 853 FKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGM 912 + YH +L+ + L G + ++ +++ LD RV IIHG G Sbjct 703 -RDYH--------VSLE-----LDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGT 748 Query 913 GKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 G +++ V+ +L+ FR G GEGG GVT+VE Sbjct 749 GALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVEL 785 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Bacillus thuringiensis str. Al Hakam] Sequence ID: A0RJF2.1 Length: 786 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Bacillus cereus 03BB102] Sequence ID: C1ETZ0.1 Length: 786 Range 1: 81 to 527 Score:257 bits(657), Expect:4e-72, Method:Compositional matrix adjust., Identities:153/464(33%), Positives:263/464(56%), Gaps:23/464(4%) Query 94 GALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDLKPHMELHAKLNKSV 153 G++LSP L I T+ +++ F + + P L + +L K+ + Sbjct 81 GSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPILETHVAQIVSLYDLEKKITNCI 140 Query 154 DMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLP 213 G ++ SAS +L R+++ A+ +I E+L+ + + + + L D + +R+ YV+P Sbjct 141 GDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRSSNAQKMLSDSIVTIRNERYVIP 200 Query 214 IRADRKSGIEGIPRGVSQSGSTVFIEPQAL-----AMQQAQLEKAQNDVEVEEQRILREL 268 ++ + + GI S SG T+FIEPQ + A+Q+A++++ Q E +RIL L Sbjct 201 VKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQ-----EIERILLML 255 Query 269 SKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPL 328 +++ + + +LS+ E++ D I A+ +A I KP R ++ R A+HPL Sbjct 256 TEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYMDLR----QARHPL 311 Query 329 FLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 ++ + + N++ L V++GPN GGKTV +KTVGI LMA++GL + Sbjct 312 --IDPEIIVPNNIMLGKDFT------TIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPV 363 Query 389 -DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDP 447 D++EI ++NIF ++GD Q+ E+ LSTFS H+ I I E+A+ SL+L DE GTDP Sbjct 364 MDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDP 423 Query 448 AIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLN 507 G A+A S L+ + A V+ TTH+ LK N + N S+EF+ + L PTYKLL Sbjct 424 QEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLI 483 Query 508 GIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQ 551 G+PG+S A E+++R+GL++ +I +AR + +++ ++EN++ +L+ Sbjct 484 GVPGRSNAFEISKRLGLSDRVIDQARNHISTDTNKIENMIAKLE 527 Range 2: 594 to 785 Score:50.1 bits(118), Expect:1e-04, Method:Compositional matrix adjust., Identities:56/217(26%), Positives:97/217(44%), Gaps:42/217(19%) Query 750 LQEIEKSTKEKVRSAQQTAKEAQSQGRSPEFWK----------------PGMSAKSTKLK 793 L+++ K+ V+ + +++ +G +PE K G K Sbjct 594 LRQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQKVNVKNTAPKQQLRAGDEVKVLTFG 653 Query 794 EKGVVL-KTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKN 852 +KG +L K +D++ ++ Q GILK+K+ + N PKQ + +K+ VK Sbjct 654 QKGQLLEKVSDTEWSV--QIGILKMKVKESNMEYIN--TPKQ---TEKKAVATVKG---- 702 Query 853 FKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGM 912 + YH +L+ + L G + ++ +++ LD RV IIHG G Sbjct 703 -RDYH--------VSLE-----LDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGT 748 Query 913 GKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 G +++ V+ +L+ FR G GEGG GVT+VE Sbjct 749 GALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVEL 785 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Bacillus anthracis str. CDC 684] Sequence ID: C3L808.1 Length: 786 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Bacillus anthracis str. A0248] Sequence ID: C3PAE0.1 Length: 786 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Bacillus anthracis] Sequence ID: Q81L40.1 Length: 786 Range 1: 81 to 527 Score:257 bits(657), Expect:5e-72, Method:Compositional matrix adjust., Identities:153/464(33%), Positives:263/464(56%), Gaps:23/464(4%) Query 94 GALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDLKPHMELHAKLNKSV 153 G++LSP L I T+ +++ F + + P L + +L K+ + Sbjct 81 GSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPILETHVAQIVSLYDLEKKITNCI 140 Query 154 DMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLP 213 G ++ SAS +L R+++ A+ +I E+L+ + + + + L D + +R+ YV+P Sbjct 141 GDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRSSNAQKMLSDSIVTIRNERYVIP 200 Query 214 IRADRKSGIEGIPRGVSQSGSTVFIEPQAL-----AMQQAQLEKAQNDVEVEEQRILREL 268 ++ + + GI S SG T+FIEPQ + A+Q+A++++ Q E +RIL L Sbjct 201 VKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQ-----EIERILLML 255 Query 269 SKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPL 328 +++ + + +LS+ E++ D I A+ +A I KP R ++ R A+HPL Sbjct 256 TEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYMDLR----QARHPL 311 Query 329 FLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 ++ + + N++ L V++GPN GGKTV +KTVGI LMA++GL + Sbjct 312 --IDPEVIVPNNIMLGKDFT------TIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPV 363 Query 389 -DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDP 447 D++EI ++NIF ++GD Q+ E+ LSTFS H+ I I E+A+ SL+L DE GTDP Sbjct 364 MDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDP 423 Query 448 AIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLN 507 G A+A S L+ + A V+ TTH+ LK N + N S+EF+ + L PT+KLL Sbjct 424 QEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTHKLLI 483 Query 508 GIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQ 551 G+PG+S A E+++R+GL+N +I +AR + +++ ++EN++ +L+ Sbjct 484 GVPGRSNAFEISKRLGLSNRVIDQARNHISTDTNKIENMIAKLE 527 Range 2: 594 to 785 Score:50.1 bits(118), Expect:1e-04, Method:Compositional matrix adjust., Identities:56/217(26%), Positives:97/217(44%), Gaps:42/217(19%) Query 750 LQEIEKSTKEKVRSAQQTAKEAQSQGRSPEFWK----------------PGMSAKSTKLK 793 L+++ K+ V+ + +++ +G +PE K G K Sbjct 594 LRQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQKVNVKNTAPKQQLRAGDEVKVLTFG 653 Query 794 EKGVVL-KTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKN 852 +KG +L K +D++ ++ Q GILK+K+ + N PKQ + +K+ VK Sbjct 654 QKGQLLEKVSDTEWSV--QIGILKMKVKESNMEYIN--TPKQ---TEKKAVATVKG---- 702 Query 853 FKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGM 912 + YH +L+ + L G + ++ +++ LD RV IIHG G Sbjct 703 -RDYH--------VSLE-----LDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGT 748 Query 913 GKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 G +++ V+ +L+ FR G GEGG GVT+VE Sbjct 749 GALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVEL 785 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [[Bacillus thuringiensis] serovar konkukian str. 97-27] Sequence ID: Q6HCX6.1 Length: 786 Range 1: 81 to 527 Score:257 bits(656), Expect:5e-72, Method:Compositional matrix adjust., Identities:153/464(33%), Positives:263/464(56%), Gaps:23/464(4%) Query 94 GALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDLKPHMELHAKLNKSV 153 G++LSP L I T+ +++ F + + P L + +L K+ + Sbjct 81 GSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPILETHVAQIVSLYDLEKKITNCI 140 Query 154 DMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLP 213 G ++ SAS +L R+++ A+ +I E+L+ + + + + L D + +R+ YV+P Sbjct 141 GDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRSSNSQKMLSDSIVTIRNERYVIP 200 Query 214 IRADRKSGIEGIPRGVSQSGSTVFIEPQAL-----AMQQAQLEKAQNDVEVEEQRILREL 268 ++ + + GI S SG T+FIEPQ + A+Q+A++++ Q E +RIL L Sbjct 201 VKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQ-----EIERILLML 255 Query 269 SKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPL 328 +++ + + +LS+ E++ D I A+ +A I KP R ++ R A+HPL Sbjct 256 TEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYMDLR----QARHPL 311 Query 329 FLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 ++ + + N++ L V++GPN GGKTV +KTVGI LMA++GL + Sbjct 312 --IDPEVIVPNNIMLGKDFT------TIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPV 363 Query 389 -DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDP 447 D++EI ++NIF ++GD Q+ E+ LSTFS H+ I I E+A+ SL+L DE GTDP Sbjct 364 MDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDP 423 Query 448 AIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLN 507 G A+A S L+ + A V+ TTH+ LK N + N S+EF+ + L PTYKLL Sbjct 424 QEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLI 483 Query 508 GIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQ 551 G+PG+S A E+++R+GL++ +I +AR + +++ ++EN++ +L+ Sbjct 484 GVPGRSNAFEISKRLGLSDRVIDQARNHISTDTNKIENMIAKLE 527 Range 2: 594 to 785 Score:50.1 bits(118), Expect:1e-04, Method:Compositional matrix adjust., Identities:56/217(26%), Positives:97/217(44%), Gaps:42/217(19%) Query 750 LQEIEKSTKEKVRSAQQTAKEAQSQGRSPEFWK----------------PGMSAKSTKLK 793 L+++ K+ V+ + +++ +G +PE K G K Sbjct 594 LRQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQKVNVKNTAPKQQLRAGDEVKVLTFG 653 Query 794 EKGVVL-KTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKN 852 +KG +L K +D++ ++ Q GILK+K+ + N PKQ + +K+ VK Sbjct 654 QKGQLLEKVSDTEWSV--QIGILKMKVKESNMEYIN--TPKQ---TEKKAVATVKG---- 702 Query 853 FKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGM 912 + YH +L+ + L G + ++ +++ LD RV IIHG G Sbjct 703 -RDYH--------VSLE-----LDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGT 748 Query 913 GKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 G +++ V+ +L+ FR G GEGG GVT+VE Sbjct 749 GALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVEL 785 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Bacillus cereus G9842] Sequence ID: B7IJV1.1 Length: 786 Range 1: 81 to 527 Score:257 bits(656), Expect:5e-72, Method:Compositional matrix adjust., Identities:153/464(33%), Positives:263/464(56%), Gaps:23/464(4%) Query 94 GALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDLKPHMELHAKLNKSV 153 G++LSP L I T+ +++ F + + P L + +L K+ + Sbjct 81 GSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPILETHVAQIVSLYDLEKKITNCI 140 Query 154 DMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLP 213 G ++ SAS +L R+++ A+ +I E+L+ + + + + L D + +R+ YV+P Sbjct 141 GDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRSSNAQKMLSDSIVTIRNERYVIP 200 Query 214 IRADRKSGIEGIPRGVSQSGSTVFIEPQAL-----AMQQAQLEKAQNDVEVEEQRILREL 268 ++ + + GI S SG T+FIEPQ + A+Q+A++++ Q E +RIL L Sbjct 201 VKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQ-----EIERILLML 255 Query 269 SKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPL 328 +++ + + +LS+ E++ D I A+ +A I KP R ++ R A+HPL Sbjct 256 TEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYMDLR----QARHPL 311 Query 329 FLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 ++ + + N++ L V++GPN GGKTV +KTVGI LMA++GL + Sbjct 312 --IDPEIIVPNNIMLGKDFT------TIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPV 363 Query 389 -DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDP 447 D++EI ++NIF ++GD Q+ E+ LSTFS H+ I I E+A+ SL+L DE GTDP Sbjct 364 MDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDP 423 Query 448 AIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLN 507 G A+A S L+ + A V+ TTH+ LK N + N S+EF+ + L PTYKLL Sbjct 424 QEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLI 483 Query 508 GIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQ 551 G+PG+S A E+++R+GL++ +I +AR + +++ ++EN++ +L+ Sbjct 484 GVPGRSNAFEISKRLGLSDRVIDQARNHISTDTNKIENMIAKLE 527 Range 2: 642 to 785 Score:48.9 bits(115), Expect:2e-04, Method:Compositional matrix adjust., Identities:48/169(28%), Positives:82/169(48%), Gaps:26/169(15%) Query 782 KPGMSAKSTKLKEKGVVL-KTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQ 840 + G K +KG +L K +D++ ++ Q GILK+K+ + N PKQ + + Sbjct 642 RAGDEVKVLTFGQKGQLLEKVSDTEWSV--QIGILKMKVKESNMEYIN--TPKQ---TEK 694 Query 841 KSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMD 900 K+ +VK + YH +L+ + L G ++++ +++ LD Sbjct 695 KAVASVKG-----RDYH--------VSLE-----LDLRGERYEDAMMRVEKYLDDAQLAS 736 Query 901 VDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 RV IIHG G G +++ V+ +L+ +R G GEGG GVT+VE Sbjct 737 YPRVSIIHGKGTGALRQGVQDYLKKHRGVKNYRYGDMGEGGLGVTVVEL 785 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Thermotoga neapolitana DSM 4359] Sequence ID: B9K937.1 Length: 757 Range 1: 73 to 578 Score:256 bits(654), Expect:7e-72, Method:Compositional matrix adjust., Identities:170/541(31%), Positives:288/541(53%), Gaps:36/541(6%) Query 91 LQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDLKPHMELHAKLN 150 L+ G+ L P L ++ L+ C K + +R +Y L + L E ++N Sbjct 73 LKAGSSLEPWELLRVSSFLEGC----DILKNDLTR-REYQKLKETFSQLVSFEEFVKEVN 127 Query 151 KSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHY 210 + ++ +G + + ASP+L RS +I ++ D+ +K LQ+ +++ RDG Y Sbjct 128 RCIEQNGEVSNRASPKLKEIRSEKRSLSTEIKKRADDFVKNHS--QILQEQMYVYRDGRY 185 Query 211 VLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRILRELSK 270 + P++A K + GI +S SG+TVF+EP+ ++ + + +E RILR L+ Sbjct 186 LFPVKASMKRSVRGIVHHLSSSGATVFMEPEEFVELNNRMRLLEEEERLEISRILRHLTN 245 Query 271 DCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFL 330 +D+ + +++ FD++ AR KFA +GI +KP + R L+NA+HPL Sbjct 246 MLLSNLKDLEKNIDLIAHFDSLYARAKFAKENNGI---VVKP---SSRIKLVNARHPL-- 297 Query 331 LENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDK 390 + + + +L L P +G +++GPN GGKTV +KTVG+ + +G + CD+ Sbjct 298 IPKDRVVPINLELPPNKKG------VIITGPNMGGKTVTVKTVGLFTALMMSGFPLLCDE 351 Query 391 A-EIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAI 449 E++ + I ++G+ Q+ E+ LSTFS H+ +I I A+ SL++LDE GTDP Sbjct 352 GTELKIFPKIMADIGEEQSIEQSLSTFSSHMKRIVEIVRNADSDSLVILDELGSGTDPVE 411 Query 450 GVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGI 509 G A+A + +E K AT+ +TTH + +K A N N SMEF+P L PTY++L G+ Sbjct 412 GAALAIAIIEDLLEKGATLFVTTHLTPVKVFAMNHPLLLNASMEFDPETLSPTYRVLVGV 471 Query 510 PGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIEINEELTKQNLLTQ 569 PG S+A ++AE++GL II+ AR+ E +E L++ L ++I + EE Sbjct 472 PGGSHAFQIAEKLGLEKRIIENARSRLSQEEMELEGLIRSLH-EKISLLEE--------- 521 Query 570 KLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNAFENRLEIRERQFEKQKETLLREI 629 E + L+ EKE+ +LR E+Y+ + ++ F+ L+ K K+ L + I Sbjct 522 ----EKRKLQKEKEEYMKLRAKYEEDYKKLRRMKIEEFDKELKELNDYIRKVKKELDQAI 577 Query 630 H 630 H Sbjct 578 H 578 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Bacillus cytotoxicus NVH 391-98] Sequence ID: A7GTK1.1 Length: 786 Range 1: 81 to 527 Score:255 bits(651), Expect:3e-71, Method:Compositional matrix adjust., Identities:153/464(33%), Positives:260/464(56%), Gaps:23/464(4%) Query 94 GALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDLKPHMELHAKLNKSV 153 G++LSP L I T+ ++ F + + P L + +L K+ + Sbjct 81 GSMLSPHELLDIASTMYGSRQMKRFIEDIVDNGAQLPILETHVAQIVSLYDLEKKITGCI 140 Query 154 DMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLP 213 G +L SAS +L R+++ A+ +I E+L+ + + + + L D + +R+ YV+P Sbjct 141 GDGGEVLDSASDKLRGIRNQIRTAESRIREKLENMTRSSNAQKMLSDAIVTIRNDRYVIP 200 Query 214 IRADRKSGIEGIPRGVSQSGSTVFIEPQAL-----AMQQAQLEKAQNDVEVEEQRILREL 268 ++ + + GI S SG T+FIEPQ + A+Q+A++++ Q E +RIL L Sbjct 201 VKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQ-----EVERILMML 255 Query 269 SKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPL 328 +++ + +L++ E++ D I A+ +A + KP R + R A+HPL Sbjct 256 TEEVAAEADIVLANVEVIANLDFIFAKALYAKRMKATKPIVNNERYMELR----QARHPL 311 Query 329 FLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 ++ K + ND+ L V++GPN GGKTV +KTVGI LMA++GL + Sbjct 312 --IDPKVIVPNDIVLGKDFT------TIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPV 363 Query 389 -DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDP 447 +++EI ++NIF ++GD Q+ E+ LSTFS H+ I I E+A+ SL+L DE GTDP Sbjct 364 QEESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDP 423 Query 448 AIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLN 507 G A+A S L+ + A V+ TTH+ LK N ++ N S+EF+ + L PTYKLL Sbjct 424 QEGAALAISILDEVHNRGARVVATTHYPELKAYGYNRNQVINASVEFDVNTLSPTYKLLI 483 Query 508 GIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQ 551 G+PG+S A E+++R+GL+ +I +AR + +++ ++EN++ +L+ Sbjct 484 GVPGRSNAFEISKRLGLSERVINRARNHISTDTNKIENMIAKLE 527 Range 2: 642 to 785 Score:56.2 bits(134), Expect:1e-06, Method:Compositional matrix adjust., Identities:52/169(31%), Positives:83/169(49%), Gaps:26/169(15%) Query 782 KPGMSAKSTKLKEKGVVLK-TADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQ 840 +PG K +KG +LK +DS+ N+ Q GILK+K+ ++ N PKQ + Sbjct 642 RPGDEVKVLTFGQKGQLLKKVSDSEWNV--QIGILKMKVKESDMEYIN--TPKQ---LEK 694 Query 841 KSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMD 900 K+ VK + YH +L+ + L G + ++ +++ LD + Sbjct 695 KAVATVKG-----RDYH--------VSLE-----LDLRGERFENAMMRVEKYLDDAQLAN 736 Query 901 VDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 RV IIHG G G +++ V+ +L++ FR G GEGG GVT+VE Sbjct 737 YPRVSIIHGKGTGALRQGVQDYLKNHRGVKSFRYGDMGEGGLGVTVVEL 785 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Synechocystis sp. PCC 6803 substr. Kazusa] Sequence ID: P73625.1 Length: 822 Range 1: 3 to 563 Score:256 bits(653), Expect:3e-71, Method:Compositional matrix adjust., Identities:182/577(32%), Positives:297/577(51%), Gaps:44/577(7%) Query 8 DNTSSTFLRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATS-- 65 D+T+ T + ++ L LEW ++ Q+L+ F P L P + E+ T Sbjct 3 DSTNLT-IAEETLALLEWPRLCQHLSTFTQTPLGAIAARYLLPPSQWEESRELLAQTQAV 61 Query 66 EMLDLNTETN----GISLESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKY 121 E ++ + E+N GI+ D T ++RG L++ L I TL ++ + Sbjct 62 ESIENSPESNWHFKGIA----DITEPLARVERGGLVTGLELLAIAGTLAGVRRLRRVIEE 117 Query 122 EKSRATKYPNLFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKI 181 L L +++ EL ++ + DG + ASP+L R +L+ + +I Sbjct 118 RDDLEI----LQTLVAEVRTLPELEQAIHHCLGEDGKVAERASPKLGEIRQKLKAVREQI 173 Query 182 VEQLDEILKKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQ 241 ++L +I+++Q NALQ+ V R +VLPI+A K + GI S SG+T+++EPQ Sbjct 174 QQKLQKIIQRQS--NALQEAVITQRGDRFVLPIKAGYKEQMPGIVHDSSASGNTLYVEPQ 231 Query 242 ALAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGV 301 A+ +L +A+ + EE+RILR+LS V D+ I T+ D AR +++ Sbjct 232 AIVELGNKLRQARRQEQTEEERILRQLSDQVLEVLLDLEHLLAIATRLDLATARVRYSFW 291 Query 302 IHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKK---CIANDLHLAPKSQGETSPYVWVL 358 + P++L P D P +L +HPL + +K + L SQ V + Sbjct 292 LGAHPPQWLTPGDEKP-ITLRQLRHPLLHWQAEKEGGPAVVPITLTIDSQIR----VIAI 346 Query 359 SGPNAGGKTVAMKTVGIIALMAKAGLFVSC-DKAEIQDYENIFVELGDRQNREEDLSTFS 417 +GPN GGKTV +KT+G++ALMAK GL++ + E+ + I ++GD Q+ +++LSTFS Sbjct 347 TGPNTGGKTVTLKTLGLVALMAKVGLYIPAKETVEMPWFAQILADIGDEQSLQQNLSTFS 406 Query 418 GHLAQIKRISEQANE------------------LSLILLDEGFVGTDPAIGVAMARSTLE 459 GH+ +I RI + SL+LLDE GTDP G A+A + L Sbjct 407 GHICRIIRILQALPSGVQDVLDPEIDSPNHPIFPSLVLLDEVGAGTDPTEGSALAIALLR 466 Query 460 YFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYAIELA 519 + + + + TTH+ LK L D+RF N S+EF+ L PTY+LL GIPG+S A+ +A Sbjct 467 HLADQPCLTVATTHYGELKALKYQDARFENASVEFDDQSLSPTYRLLWGIPGRSNALAIA 526 Query 520 ERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIE 556 +R+GL I+++A+ G SE + ++ L+ +R E Sbjct 527 QRLGLPLAIVEQAKDKLGGFSEDINQVIAGLESQRRE 563 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Clostridium novyi NT] Sequence ID: A0PZP4.1 Length: 785 Range 1: 1 to 631 Score:254 bits(650), Expect:4e-71, Method:Compositional matrix adjust., Identities:198/659(30%), Positives:336/659(50%), Gaps:33/659(5%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 + + +L LE+NKI L + +K L P+ + T E ++ + Sbjct 1 MNEKSLRVLEFNKIKDELKKYTQTSAAKDLIERLHPYESAYEVREHLMETEEAFKISIKK 60 Query 75 NGISLES-FDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLF 133 +D + QR L P L ++ L+ + + K + + KY L Sbjct 61 GDAPFSGLYDIREAISKAQRRFTLFPSELLRVANLLRASRRFKGYVKSD-DLSEKYEVLE 119 Query 134 NLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQD 193 +++ L P L +++K + + I AS L + R L+ I +++ +++ Sbjct 120 SITEGLVPLNGLEEEISKCIIGEEEISDRASTTLFNIRRSLKDKTSSIKARVNSLIRTYS 179 Query 194 IRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKA 253 + LQ++++ +R YVLP++ + K + G+ S SG+T+FIEP +L ++++ Sbjct 180 --SHLQENIYTVRGERYVLPVKVEHKGAVPGLVHDQSASGATLFIEPMSLVDLNNEIKEL 237 Query 254 QNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPR 313 + + E RIL LS Y + I ++IL + D I A+ K+A + I P + Sbjct 238 RLKEKAEIDRILAFLSGKVYENVDVIKVDADILWELDFIFAKAKYAQKLGAIMPIISE-- 295 Query 314 DLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 + F++INAKHPL ++ KK + N+++L G TS V++GPN GGKTV +KTV Sbjct 296 --DGHFNIINAKHPL--IDPKKVVENNIYL---RDGITS---VVITGPNTGGKTVTLKTV 345 Query 374 GIIALMAKAGLFVSCDKAE-IQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANE 432 G++ +MA +GL ++ + I ++ +F ++GD Q+ E+ LSTFS H+ I I + A+E Sbjct 346 GLLHIMAMSGLMITASQGSTISFFKEVFADIGDEQSIEQSLSTFSSHMTNIVNIIDSADE 405 Query 433 LSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSM 492 SL+L DE GTDP G A+A S LE +K VI TTH+S LK A N S+ Sbjct 406 NSLVLFDELGAGTDPTEGAALAVSILENLRKRKTKVIATTHYSELKAYALKVDNVENASV 465 Query 493 EFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQL 552 EF+ L PTY+LL G+PG+S A E+++R+GL + II+ AR E+ + E+L++ LQ Sbjct 466 EFDVETLRPTYRLLIGVPGKSNAFEISKRLGLPDYIIEDAREGISEETLKFEDLIQSLQH 525 Query 553 KRIEINEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKR-LNAFENRL 611 K I+ E K +S K E +L E ++ +++ +K LNA + Sbjct 526 KNIKAQEHARKA-----------ESAKEEAVKLKEKYESKLDKFQDIREKAILNAQKEAK 574 Query 612 EIRERQFEKQKETL--LREIHEISHKETIENNLEISQAQQNNLSEKNQNKLAPAQKKEI 668 EI + E+ + L +RE+ + + + LE ++ + + EK ++KL Q KE+ Sbjct 575 EIIKEAKEEADKILKDIRELERMGYSSDVRKLLEENRKKLKDKLEKTESKL--NQPKEV 631 Range 2: 602 to 784 Score:70.1 bits(170), Expect:6e-11, Method:Compositional matrix adjust., Identities:52/212(25%), Positives:96/212(45%), Gaps:29/212(13%) Query 738 DIEEQLHDDLDTLQEIEKSTKEKVRSAQQTAKEAQSQGRSPEFWKPGMSAKSTKLKEKGV 797 D+ + L ++ L++ + T+ K+ ++ + + E + P K + K + Sbjct 602 DVRKLLEENRKKLKDKLEKTESKLNQPKEVGEAVTNVSEGDELYLP-------KFETKVM 654 Query 798 VLKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYH 857 VL D+KG+++ Q GI+KIK+ +L ET ++ ++ SLN+K + Sbjct 655 VLTNPDNKGDVQVQAGIMKIKVNIKDLRKTKETKIEKRQRKKKQMSLNLKSV-------- 706 Query 858 NLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKE 917 ++ L G +E+ D LD + V IIHG G G ++ Sbjct 707 --------------ATSVDLRGMDSEEATYTADKYLDDACMSGLSEVTIIHGKGTGVLRT 752 Query 918 SVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 ++ L+ + +R G +GEGG+GVT+VE Sbjct 753 AINDMLKRHPHVKSYRLGNYGEGGNGVTVVEL 784 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Lacticaseibacillus casei BL23] Sequence ID: B3WC74.1 Length: 786 Range 1: 6 to 620 Score:254 bits(649), Expect:5e-71, Method:Compositional matrix adjust., Identities:192/635(30%), Positives:321/635(50%), Gaps:43/635(6%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTE---TNG 76 L LE++KI Q L G + ++ ++P L D A E D + G Sbjct 6 LKTLEYDKIQQALLGQVVTANGRQLVQAMQP---LTDPVAVQQALDETADGASALRLKGG 62 Query 77 I---SLESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLF 133 I LE+ D L + + GA+L+ Q L I L+ +I F + + + L+ Sbjct 63 IPVPQLENIDPALKR--VDIGAVLNGQELASISRVLQTVSAIDKFLTDLQDQ-IDFRQLY 119 Query 134 NLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQD 193 L L +L +L +VD DG + ASP+LH R +++ + KI ++ + Sbjct 120 TLQESLTVLPQLSRRLKTAVDPDGTLTDEASPQLHGVREQIKSIEGKIRGKMTNYTRGAQ 179 Query 194 IRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKA 253 + L D + +RD YV+P++A+ ++ G+ S +G T+FIEPQ + +L +A Sbjct 180 SKY-LSDPIVTIRDDRYVIPVKAEYRAKFGGVVHDQSATGQTLFIEPQVIVALNNRLREA 238 Query 254 QNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPR 313 Q E RIL ELS + I +++ +L FD I A+ + A +P Sbjct 239 QLAEVAEINRILAELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPLVSADN 298 Query 314 DLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 D+ R +A+HPL ++ K + ND+ L K Q V++GPN GGKT+ +KT+ Sbjct 299 DVLLR----DARHPL--IDPHKVVGNDIPLGDKYQA------MVITGPNTGGKTITLKTL 346 Query 374 GIIALMAKAGLFVSCD-KAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANE 432 G++ LM ++GLF+ D ++ I ++ +F ++GD Q+ E++LSTFS H+ I I +Q ++ Sbjct 347 GLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLSTFSAHMDNIVHILKQLSQ 406 Query 433 LSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSM 492 SL+L DE GTDP G A+A + L+ A V+ TTH+ LK N ++ N SM Sbjct 407 NSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYVVATTHYPELKLYGYNTAKTINASM 466 Query 493 EFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKEL-- 550 EF+ L PTY+LL G+PG+S A +++ R+GL + I+++A++ S+S + N++ +L Sbjct 467 EFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPSVIVERAKSMISSDSHELNNMISDLEK 526 Query 551 QLKRIEINEELTKQNL-----LTQKLDSEFKSLKNEK----EQLSELRGDLVENYRNKLQ 601 Q K E E ++ L + +L + +K E+ +Q + LV+ + K Sbjct 527 QRKAAETAYEAARRQLADAQSVHDELAAAYKKFTTERDAQLQQAKDKANSLVDKAQTKAD 586 Query 602 K-----RLNAFENRLEIRERQFEKQKETLLREIHE 631 K R N ++E Q K T L+++H+ Sbjct 587 KIIKQLRQMQLTNPGTVKENQLIAAK-TALKQLHQ 620 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Lacticaseibacillus paracasei ATCC 334] Sequence ID: Q03AZ5.1 Length: 786 Range 1: 6 to 620 Score:254 bits(648), Expect:7e-71, Method:Compositional matrix adjust., Identities:192/635(30%), Positives:325/635(51%), Gaps:43/635(6%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTE---TNG 76 L LE++KI Q L G + ++ ++P L D A E D + G Sbjct 6 LKTLEYDKIQQALLGQVVTANGRQLVQAMQP---LTDPVAVQQALDETADGASALRLKGG 62 Query 77 I---SLESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLF 133 I LE+ D L + + GA+L+ Q L I L+ +I F + + + L+ Sbjct 63 IPVPQLENIDPALKR--VDIGAVLNGQELASISRVLQTVSAIDKFLTDLQDQ-IDFRQLY 119 Query 134 NLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQD 193 L L +L +L +VD DG + ASP+LH R +++ + +I ++ + Sbjct 120 TLQESLTVLPQLSRRLKTAVDPDGTLTDEASPQLHGVREQIKSIEGEIRGKMTNYTRGAQ 179 Query 194 IRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKA 253 + L D + +RD YV+P++A+ ++ G+ S +G T+FIEPQA+ +L +A Sbjct 180 SKY-LSDPIVTIRDDRYVIPVKAEYRAKFGGVVHDQSATGQTLFIEPQAIVALNNRLREA 238 Query 254 QNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPR 313 Q E RIL ELS + I +++ +L FD I A+ + A +P Sbjct 239 QLAEVAEINRILAELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPLVSADN 298 Query 314 DLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 D+ R +A+HPL ++ K + ND+ L K Q V++GPN GGKT+ +KT+ Sbjct 299 DVLLR----DARHPL--IDPHKVVGNDIPLGDKYQA------MVITGPNTGGKTITLKTL 346 Query 374 GIIALMAKAGLFVSCD-KAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANE 432 G++ LM ++GLF+ D ++ I ++ +F ++GD Q+ E++LSTFS H+ I I +Q ++ Sbjct 347 GLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLSTFSAHMDNIVHILKQLSQ 406 Query 433 LSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSM 492 SL+L DE GTDP G A+A + L+ A V+ TTH+ LK N ++ N SM Sbjct 407 NSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYVVATTHYPELKLYGYNTAKTINASM 466 Query 493 EFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKEL-- 550 EF+ L PTY+LL G+PG+S A +++ R+GL I+++A++ S+S + N++ +L Sbjct 467 EFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPGVIVERAKSMISSDSHELNNMISDLEK 526 Query 551 QLKRIEINEELTKQNL-----LTQKLDSEFKSLKNEKE-QLSELRG------DLVENYRN 598 Q K E E ++ L + +L + +K E++ QL + + D + + Sbjct 527 QRKAAETAYEAARRQLADAQSVHDELAAAYKKFTTERDAQLQQAKDKANTLVDKAQTKAD 586 Query 599 KLQKRLNAFE--NRLEIRERQFEKQKETLLREIHE 631 K+ K+L + N ++E Q K T L+++H+ Sbjct 587 KIIKQLRQMQLTNPGTVKENQLIAAK-TALKQLHQ 620 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Halothermothrix orenii H 168] Sequence ID: B8D298.1 Length: 791 Range 1: 1 to 643 Score:253 bits(645), Expect:2e-70, Method:Compositional matrix adjust., Identities:201/678(30%), Positives:345/678(50%), Gaps:59/678(8%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFF------FTATSEML 68 + + +L LE++KI + FA K+ S L+P +++ N+ ++ E+L Sbjct 1 MEESSLEILEFDKIIDRVQEFAATIIGKEIISRLQP---VDNLNYVKNKLREVSSAREIL 57 Query 69 DLNTET--NGISLESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRA 126 + GI D +G +LS + + + TL+ ++ KY + Sbjct 58 EEYGRPPFGGIR----DLREIIEKADKGIVLSVKEVMDVRSTLE---GVRELKKYSREIG 110 Query 127 TK--------YPNLFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAK 178 T Y + + L P +L ++N+ +D G I SAS +L S R ++ + Sbjct 111 TGIDDELQDIYSIITEKFDRLTPLKQLENEINRCIDEHGEIKDSASRKLRSIRREMDRIE 170 Query 179 RKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFI 238 KI ++L+ I+ + LQD + +R YV+P+++ K+ GI S SG T F+ Sbjct 171 GKINDKLNSIINNTRYQEMLQDKLVTIRGNRYVVPVKSSYKNTFSGIVHDQSTSGLTYFM 230 Query 239 EPQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKF 298 EP A+ +L + + E E RIL++LS++ D+ + E+++ D AR +F Sbjct 231 EPMAIVKLNNRLGELKRAEEQEIYRILKKLSENIKEHTRDLSDNLEMVSLLDVDFARARF 290 Query 299 AGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVL 358 + I GI+P +N R +HPL + K + D+ + + + V+ Sbjct 291 SIEIEGIEPGINDKGFINIR----GGRHPLLKV---KPVPIDITVGNEFK------TLVI 337 Query 359 SGPNAGGKTVAMKTVGIIALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFS 417 +GPN GGKTVA+KTVG+ LM +AGL + ++ I + ++ ++GD Q+ E++LSTFS Sbjct 338 TGPNTGGKTVALKTVGLFVLMVQAGLHIPAEEETVISIFNGVYADIGDEQSIEQNLSTFS 397 Query 418 GHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNL 477 H+ +IKR +A+ SL+LLDE VGTDP G A+ + LE+ + T I TTH+S + Sbjct 398 SHINRIKRFLGKADARSLVLLDEIGVGTDPREGAALGVAILEHLRERGVTTIATTHYSEI 457 Query 478 KTLADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYG 537 K+ A + N S+EF+ L PTY+LL GIPG S A E+A ++GL ++II+ + Sbjct 458 KSYAYSQDGVENASVEFDMETLQPTYRLLMGIPGGSNAFEIALKLGLPHDIIKDGKELMS 517 Query 538 SESERMENLLKELQLKRIEINEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYR 597 + ++EN++ +L NEE K L +++ +++K ++++ L DL Sbjct 518 GDDIKVENIISDL-------NEERKKYEQLKIEIEERLEAVKKKEQKYDSLLTDL----- 565 Query 598 NKLQKRL--NAFENRLEIRERQFEKQKETLLR----EIHEISHKETIENNLEIS-QAQQN 650 K +K+L A E L+I ++ ++ KE L R E S + +EN + ++ + + Sbjct 566 EKRKKKLITEAREEALQIIKKTRKESKEILRRLKNKEFASRSDIDRVENEINLNLKETEK 625 Query 651 NLSEKNQNKLAPAQKKEI 668 +SEK QNK + KEI Sbjct 626 EISEKRQNKDGRTRVKEI 643 Range 2: 590 to 789 Score:55.8 bits(133), Expect:1e-06, Method:Compositional matrix adjust., Identities:61/229(27%), Positives:98/229(42%), Gaps:32/229(13%) Query 724 EARMSLQSLKNSFDDIEEQLHDDLDTLQ-EIEKSTKEKVRSAQQTAKEAQSQGRSPEFWK 782 E++ L+ LKN E D+D ++ EI + KE + + + + R E Sbjct 590 ESKEILRRLKNK----EFASRSDIDRVENEINLNLKETEKEISEKRQNKDGRTRVKEI-S 644 Query 783 PGMSAKSTKLKEKGVVLKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKS 842 G + K +KG V+ KG Q GI+K+ E+ + Sbjct 645 CGDQVRLKKTGQKGEVISVDREKGEAVIQAGIMKVTTGLDEV-----------------A 687 Query 843 SLNVKPLTKN--FKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMD 900 +++ TK+ F Y + S + PTL L G + + KLD LD + Sbjct 688 KIDIPDDTKDELFHSYQVKKKSRVSPTLD-------LRGERYETAQHKLDKYLDDVFLAG 740 Query 901 VDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 + +V IIHG G G ++++V LE + + +R GR EGG GVTI + Sbjct 741 LKQVEIIHGKGTGALRKAVHTVLEKNPHITSYRLGRQEEGGSGVTIADL 789 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Ruminiclostridium cellulolyticum H10] Sequence ID: B8I1Z8.1 Length: 792 Range 1: 9 to 615 Score:253 bits(645), Expect:2e-70, Method:Compositional matrix adjust., Identities:182/622(29%), Positives:312/622(50%), Gaps:24/622(3%) Query 23 LEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISLESF 82 LE++KI L G ++ EL P + + T++ + L Sbjct 9 LEFDKILDKLKGLTASELGRELVLELTPQTDYRVVEKMLSETNDGVSCIMRRGSPPLGGI 68 Query 83 -DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFF--KYEKSRATKYPNLFNLSNDL 139 D + L G +L+P L ++ L+ ++ + K +++ A+ L + L Sbjct 69 TDIRMSLKRLDMGGVLNPGELLRLAGVLRAARRLKGYINDKLDENNASVVKELISC---L 125 Query 140 KPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQ 199 + + L K++ + + I +ASP L S R +++ + I ++L+ I++ + +Q Sbjct 126 ESNQRLEQKIDNCILSEDEIADNASPALSSIRRQIKEQQASIKDKLNSIIRSTKYQKYIQ 185 Query 200 DDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEV 259 + V +R YV+P++ + K I G+ S SG+T+FIEP A+ +++ + + Sbjct 186 ESVVTMRGDRYVIPVKQEHKGDIPGLVHDSSASGATLFIEPMAVVEANNSIKQLRVKEQT 245 Query 260 EEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRF 319 E RIL ELS+D LV + ++ I+ + D I A++K A + I P+ + + Sbjct 246 EIDRILAELSQDASLVLPQLNANMSIMARLDFIFAKSKLAIDYNCICPKI----NDTGKI 301 Query 320 SLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALM 379 + +HPL L+ K + D + K +++GPN GGKTV++KTVG+ LM Sbjct 302 IIKKGRHPL--LDPKIVVPIDFWIGEKFSS------LIVTGPNTGGKTVSLKTVGLFTLM 353 Query 380 AKAGLFVSC-DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILL 438 ++GL V D E+ +E I+ ++GD Q+ E+ LSTFS H+ I I N SLILL Sbjct 354 MQSGLLVPANDGTEMSVFEKIYADIGDEQSIEQSLSTFSSHMKNIVDILSGVNNKSLILL 413 Query 439 DEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHK 498 DE GTDP G A+A S LE AT + TTH+S LK A + + N S EF+ Sbjct 414 DELGAGTDPTEGAALAMSILECLHQMGATTLATTHYSELKVYAISTTGVENASCEFDVET 473 Query 499 LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIEIN 558 L PTY+LL G+PG+S A +++R+GL ++II++++ + E R E++L ++ R E Sbjct 474 LRPTYRLLIGVPGKSNAFAISKRLGLTDDIIERSKEFLSQEDIRFEDILLSIEKNRSEAE 533 Query 559 EELTKQNLLTQKLDSEFKSLKNEKEQL-----SELRGDLVENYRNKLQKRLNAFENRLEI 613 +E + Q+ + K L+++K +L SELR E R + A E E+ Sbjct 534 KEKMRAESYRQEAERLKKDLEDQKRRLAAQKESELRKAREEARRILTDSKRQADELVSEM 593 Query 614 RERQFEKQKETLLREIHEISHK 635 + E+++ + R+ E+ K Sbjct 594 KRLAKEQEEAEVRRQTEELRQK 615 Range 2: 551 to 791 Score:68.9 bits(167), Expect:1e-10, Method:Compositional matrix adjust., Identities:66/262(25%), Positives:110/262(41%), Gaps:34/262(12%) Query 701 QSLDEKAERFRAPKNMSSRSLLDEARMSLQSLKNSFDDI------------EEQLHDDLD 748 + L+++ R A K R +EAR L K D++ E ++ + Sbjct 551 KDLEDQKRRLAAQKESELRKAREEARRILTDSKRQADELVSEMKRLAKEQEEAEVRRQTE 610 Query 749 TL-QEIEKSTKEKVRSAQQTAKEAQSQGRSPEFWKPGMSAKSTKLKEKGVVLKTADSKGN 807 L Q++ KS S ++ Q + P+ KPG + L +KG VL D G Sbjct 611 ELRQKLNKSINNLDDSLVESIMPRQGLVKPPKNLKPGDTVLIVNLNQKGTVLTLPDKNGE 670 Query 808 IECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPT 867 + Q GI+KI + L L + Q++ + ++K Sbjct 671 AQVQAGIMKINVHISNL-----KLVDEQKQQIQRTGMGKIGVSKA--------------- 710 Query 868 LQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSS 927 Q+ I L G + E++D +D LD + V +IHG G G ++ + +HL+ + Sbjct 711 -QNMSTEIDLRGMMLSEAVDVVDKYLDDASIAGMGGVTLIHGKGTGALRAGLHQHLKHNP 769 Query 928 YKLRFRGGRHGEGGDGVTIVEF 949 + FR G+ GEG +GVT+VE Sbjct 770 HIKSFRLGKLGEGENGVTVVEL 791 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Enterococcus faecalis V583] Sequence ID: Q835H3.1 Length: 788 Range 1: 1 to 529 Score:252 bits(644), Expect:3e-70, Method:Compositional matrix adjust., Identities:163/544(30%), Positives:283/544(52%), Gaps:19/544(3%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 + Q L+ L ++K+ Q L F SEL P + + T + L + Sbjct 1 MNQRILSTLGFDKVKQQLLQFIVTAQGTNEVSELLPIADENKIQSWLNETQDGLKVQRLR 60 Query 75 NGISLESFDFTLFQNFLQR---GALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPN 131 GI + + Q ++R GA L+ L Q+ L + FF + Sbjct 61 GGIPIPKLEN--IQPHMKRIEIGADLNGIELAQVGRVLSTTSELTRFFDELSENEVDFER 118 Query 132 LFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKK 191 L+ L+ EL+ +L +++D DG + ASP L + R + +++ I E+LD I++ Sbjct 119 LYMWREQLEVLPELNRQLKQAIDDDGYVTDEASPALKAIRQNIRRSEQTIREELDSIIRG 178 Query 192 QDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLE 251 ++ R L D + +R+ YV+P++ + K+ G+ S SG T+FIEP+ + +L Sbjct 179 KNAR-YLSDALVTMRNERYVIPVKQEYKNIFGGVVHDQSASGQTLFIEPKQILEMNNRLR 237 Query 252 KAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLK 311 + Q E RIL ELS + +I ++ ++ + D I A+ + + + PE + Sbjct 238 QQQIAERNEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQ 297 Query 312 PRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMK 371 + A+HPL L +K +AND+ + + Q V++GPN GGKT+ +K Sbjct 298 ANHV----VFKQARHPL--LNPEKAVANDIVIGEEYQA------IVITGPNTGGKTITLK 345 Query 372 TVGIIALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQA 430 T+G++ LM +AGL + ++ +++ + +F ++GD Q+ E+ LSTFS H+ I + ++ Sbjct 346 TLGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKV 405 Query 431 NELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNG 490 + SL+L DE GTDP G A+A + L+ K A V+ TTH+ LK N + N Sbjct 406 DHQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINA 465 Query 491 SMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKEL 550 SMEF+ L PTY+LL G+PG+S A E+++R+GL+N+II+ A+ ES+ + ++++L Sbjct 466 SMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIMDGESQDLNEMIEDL 525 Query 551 QLKR 554 + +R Sbjct 526 ENRR 529 Range 2: 656 to 787 Score:51.6 bits(122), Expect:3e-05, Method:Compositional matrix adjust., Identities:37/156(24%), Positives:68/156(43%), Gaps:24/156(15%) Query 794 EKGVVLKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNF 853 ++G +LK + KG + Q GILK+ + ++ P +PQK + KP Sbjct 656 QRGTLLKD-NGKGQWQVQLGILKMNVSEEDMTP----------VAPQKEA---KPRVTTV 701 Query 854 KKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMG 913 + + H G + L G +E+L ++D +D +V I+HG G G Sbjct 702 RSAES----------SHVGTQLDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGTG 751 Query 914 KIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 ++ + L++ + +GG+G T+V+F Sbjct 752 ALRTGITEFLKNHRSVKSYEFAPQNQGGNGATVVKF 787 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Carboxydothermus hydrogenoformans Z-2901] Sequence ID: Q3ABU1.1 Length: 777 Range 1: 47 to 579 Score:251 bits(642), Expect:4e-70, Method:Compositional matrix adjust., Identities:178/560(32%), Positives:301/560(53%), Gaps:43/560(7%) Query 67 MLDLNTETNGISLESFDFTLFQNF------LQRGALLSPQALYQILITLKLCHSIQSFFK 120 +L++ + + ++ D ++ +F L + ++L+ Q +Y++ LK+ +FF Sbjct 47 LLEVEEGLSYLRFKTVDLSVLSDFSEIFLKLSKESMLTGQEIYRLGQLLKVSKD--TFF- 103 Query 121 YEKSRATKYPNLFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRK 180 E SR +P L + L L + +S +G + ASPEL R ++ K K Sbjct 104 -EISRGA-FPRLKQIVKLLFFDEALVKDIERSFWPEGTVKDEASPELKRIRGQIARLKDK 161 Query 181 IVEQLDEILKKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEP 240 + E +++ LK+ ++ LQ+ + +R +VLP++A KS + GI S +G T+FIEP Sbjct 162 MREAVEKYLKEPELAKYLQEPLISVRGDRFVLPVKASYKSQVPGIIHDRSNTGQTLFIEP 221 Query 241 QALAMQQAQLEKAQNDVEVEEQRILRELSKD------CYLVHEDILSSSEILTQFDNIIA 294 + +L +E++E+ I+ ++ KD C L +I + E+L + D I+A Sbjct 222 YSAVEAGNEL----KTLELQEKEIIEKILKDFTQRLACNLT--EIKRTYELLGEIDLIVA 275 Query 295 RTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPY 354 + + A + KP + N S A+HPL KK + DL L + Sbjct 276 KARLALELDAYKPRISE----NGVLSFKQARHPLL---GKKAVPFDLTLGKEFD------ 322 Query 355 VWVLSGPNAGGKTVAMKTVGIIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDL 413 + +++GPN GGKTV +KT+GI+ +MA+AGLF+ + + EI + ++V++GD Q+ + L Sbjct 323 LLIITGPNTGGKTVTLKTIGILTIMARAGLFIPASPETEIGLFGEVYVDIGDEQSIVQSL 382 Query 414 STFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTH 473 STFS HL +K I E A E L+LLDE GTDP G A+A++ LE KK V+ TTH Sbjct 383 STFSSHLLNLKFILENAREGDLVLLDELGTGTDPREGAALAKAILEELRGKKVKVVATTH 442 Query 474 FSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 S L A R N S+EF+P L PTY+L G PG+S A+ +A+ +GL II+KA+ Sbjct 443 TSELAAYAIETERVENASVEFDPESLKPTYRLHIGKPGRSNALYIAQGLGLKEQIIEKAK 502 Query 534 TYYGSESERMENLLKELQLKRIEI---NEELTKQNLLTQKLDSEFKSLKNEKEQLSELRG 590 ++ E +++ L+ +++ ++ ++ EE+ NLL + E K L +E E L + + Sbjct 503 SFLKEEELKLDKLIFDVEQEKRQLEKAKEEVA--NLLISLKEKEAK-LNDELENLEKTKE 559 Query 591 DLVENYRNKLQKRLNAFENR 610 +++ YR K Q++L E + Sbjct 560 EIIRKYREKYQQKLLEIERK 579 Range 2: 585 to 774 Score:43.1 bits(100), Expect:0.012, Method:Compositional matrix adjust., Identities:50/213(23%), Positives:95/213(44%), Gaps:29/213(13%) Query 741 EQLHDDLDTLQEIEKSTKEKVRSAQQTAKEAQSQGRSP-EFWKP-----GMSAKSTKLKE 794 E++ + + T +E K+ + + A+Q KE P E KP G + + ++ + Sbjct 585 EEIKEKIKTYEE--KNLAKLLEEARQKTKEFSQNFALPFEPIKPYRPKVGETVELVEVGQ 642 Query 795 KGVVLKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNFK 854 K VL ++ + Q GI+K+ + + ++ P + + +K+ L LTK K Sbjct 643 KAEVLAVGENYAIV--QAGIMKLNVSFDQIRPAQKQEKENEKGQVKKAGLE---LTK--K 695 Query 855 KYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGK 914 + NL+ + + G E+ ++ LD + V++V IIHG G G Sbjct 696 QNFNLE--------------LDIRGMNTLEAEPVVEKYLDNAYLAGVEKVRIIHGKGTGA 741 Query 915 IKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIV 947 +K+ + +L + + +F +GGDG T V Sbjct 742 LKKFLWDYLREVPFVKKFNFAPQNQGGDGATEV 774 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Lachnospira eligens ATCC 27750] Sequence ID: C4Z417.1 Length: 787 Range 1: 1 to 563 Score:251 bits(642), Expect:5e-70, Method:Compositional matrix adjust., Identities:171/582(29%), Positives:299/582(51%), Gaps:22/582(3%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 + + +L+ LE+ KIT L +A +KK L+P ++ D N T++ L + Sbjct 1 MNKKSLSTLEFYKITDQLVSYACCDGAKKILRNLKPMTDITDINLRLNETNDALSRIFQK 60 Query 75 NGISL-ESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKY-EKSRATKYPNL 132 + ++ D L+ G+ L+ L I L ++ ++++ E S + NL Sbjct 61 GTVDFSQTKDIRASVARLKVGSSLNISELLNISAILSCAKHVKDYYEHREDSISGMLENL 120 Query 133 FNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQ 192 + L++++ K + + I AS L S R A +I +L+++L Sbjct 121 ATVD-------ALNSQIKKCIISEDEISDDASSNLRSIRRSKSIANDRIHSELNKLLNSP 173 Query 193 DIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEK 252 R LQD V R G Y LP++A+ KS G+ S +GST+FIEP A+ + + Sbjct 174 TYRTYLQDYVITTRQGRYCLPVKAEYKSAFPGMIHDQSSTGSTLFIEPAAVVKLNNDIRE 233 Query 253 AQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKP 312 + E + IL +LS E++L EIL + D I A+ + A +H +P Sbjct 234 LELKEAAEIEVILADLSAKAGEHTEELLCDYEILVELDCIFAKAQLARHMHASRPVMNTS 293 Query 313 RDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKT 372 +N + +HPL +E+ + D++L T + +++GPN GGKTV++KT Sbjct 294 GIINIK----KGRHPL--IESHTVVPIDIYLG------TDFKLLIITGPNTGGKTVSLKT 341 Query 373 VGIIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQAN 431 VG++ LMA++GLF+ + D ++I ++NI+ ++GD Q+ E+ LSTFS H+ +I ++A+ Sbjct 342 VGLLTLMAQSGLFIPALDHSDIAVFKNIYADIGDEQSIEQSLSTFSSHMTNTVKILKEAD 401 Query 432 ELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGS 491 E L+L DE GTDP G A+A + L ++ T + TTH+S +K A + N S Sbjct 402 ENCLVLFDEIGAGTDPTEGAALAIAILNDLKMRGVTTMATTHYSEIKLYALSTEGVENAS 461 Query 492 MEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQ 551 EF+ L PTY+LL GIPG+S A +++++GL + I+ A +E E+++ +L+ Sbjct 462 CEFDVESLRPTYRLLIGIPGKSNAFAISKKLGLPDYILSDASERLNAEDVHFEDIVSDLE 521 Query 552 LKRIEINEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLV 593 RI + +E + ++ S + L+ + E+L E +++ Sbjct 522 HARISLEKEQAEVESYKAEIASLKEKLQAKNERLDERTDNII 563 Range 2: 546 to 786 Score:75.5 bits(184), Expect:1e-12, Method:Compositional matrix adjust., Identities:74/259(29%), Positives:113/259(43%), Gaps:28/259(10%) Query 701 QSLDEKAERFRAPKNMSSRSLLDEARMSLQSLKNSFDDIEEQLHDDLDTLQEIEK---ST 757 + L K ER + R ++A L+ K+ D+ + ++ T+ E+EK + Sbjct 546 EKLQAKNERLDERTDNIIRKANEQAAAILKDAKDFADETIKAMNKHGMTVAELEKHRTAV 605 Query 758 KEKVRSAQ-----QTAKEAQSQGRSPEFWKPGMSAKSTKLKEKGVVLKTADSKGNIECQF 812 +EK+ Q + AK + +K GM K + G V +K + Q Sbjct 606 REKMNKNQAKLKVEPAKVKAHKAHDISEFKTGMHVKVLTMNVSGTVSAIHPAKKQVTVQV 665 Query 813 GILKIKIPYHEL-IPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHG 871 G L KI L I + PK+ S S +K ++K+ G Sbjct 666 GALSTKIDIKNLEILSDYKEPKEAPSKAAGGSGKIK-MSKS-----------------AG 707 Query 872 GNT-IQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKL 930 +T I LLGCTVDE++ +LD LD + + +V I+HG G G ++ V +L Y Sbjct 708 ISTEINLLGCTVDEAVARLDKYLDDAYIARIPQVRIVHGKGTGALRNGVTAYLRGVPYIK 767 Query 931 RFRGGRHGEGGDGVTIVEF 949 FR G GEG GVTIV+F Sbjct 768 SFRLGEIGEGDAGVTIVDF 786 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Leuconostoc citreum KM20] Sequence ID: B1MXB4.1 Length: 801 Range 1: 6 to 634 Score:251 bits(640), Expect:1e-69, Method:Compositional matrix adjust., Identities:180/645(28%), Positives:330/645(51%), Gaps:23/645(3%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISL 79 L LE++KI L F + P + +EL+P +++ N + T++ + ++ GI L Sbjct 6 LQTLEYDKIKLQLNDFLSTPTGLQEANELQPVSDVDLINHWLAETADAVLIDRLKGGIPL 65 Query 80 ESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRAT--KYPNLFNLS 136 D T L A LS L ++ + L+ +I SFF+ + A L + Sbjct 66 SKLSDITPHLKRLNIEASLSATELSEMSLVLRNTSTIASFFEQMQDEAIGESLRVLPEQA 125 Query 137 NDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRN 196 +L ++ ++ ++D G + AS EL R R+ ++ + Q+ + + + Sbjct 126 KNLVTLPDITRQIQIAIDSSGRLNDEASYELKHVRDRINGTEQAVKNQMQAYTRGKTAQY 185 Query 197 ALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQND 256 L D + +R YVLP++A+ +S G+ SQ+G T+++EPQA+ +L + + Sbjct 186 -LSDPIVTIRSDRYVLPVKAEYRSQFGGVVHDQSQTGQTLYVEPQAVVTLNNKLSELRVQ 244 Query 257 VEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLN 316 + EEQR+L+ELS E+I ++ IL FD + A+ + A + ++P + Sbjct 245 EQAEEQRVLQELSATLAPHTEEIANNVTILGHFDFVNAKARLAARLDAMQPMV----NTE 300 Query 317 PRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGII 376 + L A HPL L+ +AND+ L + +++GPN GGKT+ +KT+GI+ Sbjct 301 NKVDLQQAWHPL--LDKDLAVANDIALGDGYKA------IIITGPNTGGKTITIKTLGIL 352 Query 377 ALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSL 435 LMA++GLF++ + + + + IF ++GD Q+ E+ LSTFS H+A I + ++ ++ +L Sbjct 353 QLMAQSGLFITTKRPSTVGVFHEIFADIGDEQSIEQSLSTFSSHMANIVSMIDRIDDKTL 412 Query 436 ILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFE 495 ++ DE GTDPA G A+A + L+ + A VI TTH+ LK N N SM F+ Sbjct 413 VIFDELGAGTDPAEGAALAIAILDKVASLGAFVIATTHYPELKLYGYNRPETLNASMVFD 472 Query 496 PHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRI 555 L PTY+ L G+PGQS A+ +A+R+G +++I A + + ++ +L +R Sbjct 473 VSTLKPTYQFLMGVPGQSNALAIAKRLGFGDDVIGAATALTSDADQDLNQMIADLVAQRD 532 Query 556 EINEE---LTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNAFENRLE 612 + + L++Q T+K + ++L ++ QL + R +V + +N+ + A + + E Sbjct 533 AVKQHDVALSEQLKATEK---QSEALSEQQRQLEKERAKIVLDAKNEANHIVAATKKQAE 589 Query 613 IRERQFEKQKETLLREIHEISHKETIENNLEISQAQQNNLSEKNQ 657 + K + + E+S ++ ++ +QN+ EKN+ Sbjct 590 QMISEIRKARLNAGQSAGELSEQDLQAKKRQLDGLRQNSSLEKNK 634 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Clostridium acetobutylicum ATCC 824] Sequence ID: Q97GM6.1 Length: 788 Range 1: 1 to 543 Score:250 bits(639), Expect:1e-69, Method:Compositional matrix adjust., Identities:160/560(29%), Positives:295/560(52%), Gaps:21/560(3%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 + + +L LE+ KI + + + +KK ELEP+ L + T E +L + Sbjct 1 MNEKSLRVLEYFKIKDGIKKYISTSAAKKLIDELEPYGSLYEVKEHIEETKEAFELLMKK 60 Query 75 NGISLE-SFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLF 133 E ++D T + ++G L+P L ++ L+ + + + K Y + Sbjct 61 GAPPFEGAYDVTEAVSMAEKGFSLAPGQLLKVGSMLRCARKFKEYISH-KEEEESYRIIE 119 Query 134 NLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQD 193 ++ + + P + + ++ + I AS L+S R L+ I ++++ +++ Sbjct 120 DICSGIIPLKNIEDNIFNAIIGEEEISDKASTALYSIRRSLKDKNASIKDKVNAMMRSYS 179 Query 194 IRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKA 253 LQ++++ +R YV+P++A+ K+ + G+ S +G+T+FIEP L ++++ Sbjct 180 --KYLQENLYTIRGERYVIPVKAEYKAQVPGLVHDQSSTGATLFIEPMGLVNLNNEIKEL 237 Query 254 QNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPR 313 + E +RILRELS Y + ++ +I+T+ D I A+ K+A I+ P Sbjct 238 MLKEKAEIERILRELSALIYKSIVAVKNNEKIVTELDFIFAKAKYASSINATAPH----- 292 Query 314 DLNPR--FSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMK 371 +N + ++ +HPL ++ K + ++++ + V++GPN GGKTV +K Sbjct 293 -VNDKGVIDIVMGRHPL--IDPAKVVPLNIYMGREFTS------LVITGPNTGGKTVTLK 343 Query 372 TVGIIALMAKAGLFVSC-DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQA 430 T G++ +MA +GL + + + I ++ ++ ++GD Q+ E+ LSTFS H+ I RI + A Sbjct 344 TTGLLEVMAMSGLMIPARENSTISFFKEVYADIGDEQSIEQSLSTFSSHMTNIVRIIDDA 403 Query 431 NELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNG 490 +E SL+L DE GTDP G A+A S LE + ++ TTH+S LK A N Sbjct 404 DEDSLVLFDELGAGTDPTEGAALAISILEALRKRGTKIVATTHYSELKAYALKTENVENA 463 Query 491 SMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKEL 550 S+EF+ L PTY+LL GIPG+S A E+++R+GL++ II++AR ++ E+L++ L Sbjct 464 SVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLSDYIIEEARKGISKDTLEFEDLIQNL 523 Query 551 QLKRIEINEELTKQNLLTQK 570 Q + ++ E L K L ++ Sbjct 524 QTRSVKAEENLRKAEFLKEQ 543 Range 2: 607 to 787 Score:83.6 bits(205), Expect:5e-15, Method:Compositional matrix adjust., Identities:60/201(30%), Positives:98/201(48%), Gaps:21/201(10%) Query 750 LQEIEKSTKEKVRSAQQTAKEAQ-SQGRSPEFWKPGMSAKSTKLKEKGVVLKTADSKGNI 808 LQE + KEK+ +A+++ ++ QG + + K G L KG+V+ T DSKG + Sbjct 607 LQESRQKLKEKLNNAEESLNISERDQGEALKSVKEGEEVFIPSLNMKGIVISTQDSKGEV 666 Query 809 ECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTL 868 Q GI+KI + +L N P++K K ++ E L Sbjct 667 GIQAGIMKINVKLKDL-----------------RKTNNNPISK---KEKAVKKREARLNL 706 Query 869 QHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSY 928 + +I L G +E++ K DI LD+ + + V +IHG G G ++ ++ L+ +S+ Sbjct 707 KSVAQSIDLRGLDSEEAIYKTDIYLDEAYMAGLGSVTVIHGKGTGVLRNAINTMLKKNSH 766 Query 929 KLRFRGGRHGEGGDGVTIVEF 949 +R G GEGG GVT+VE Sbjct 767 VKSYRLGNFGEGGTGVTVVEL 787 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Brevibacillus brevis NBRC 100599] Sequence ID: C0Z9F1.1 Length: 785 Range 1: 1 to 596 Score:249 bits(636), Expect:3e-69, Method:Compositional matrix adjust., Identities:180/625(29%), Positives:321/625(51%), Gaps:36/625(5%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 + Q L LE++KI L A+ + K+ SEL P+L L++ T + + Sbjct 1 MEQRVLKTLEYDKIVALLIDKASCTYGKEKASELIPFLRLDEVINAQQGTEQAATVLRLK 60 Query 75 NGISLESFDFTLFQNFLQRG---ALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPN 131 + L + +QR A+L+P L I T+ +++F + + P Sbjct 61 GSVPLGGIRD--IRGPVQRARLNAMLAPMELLDIASTVMAGRRLKTFL-LDMCDDHELPL 117 Query 132 LFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKK 191 L + ++ EL ++ + VD +G+IL SAS EL R + + +I E+LD++ + Sbjct 118 LQQQAERIEGLRELETEIRRCVDENGDILDSASLELRQVRQEIRQLESRIREKLDQMTRS 177 Query 192 QDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLE 251 + L +++ +R +V+P++ + +S GI S SG+T+FIEP+ + +L Sbjct 178 STYQKMLMENIVTIRGDRFVIPVKQEYRSVFGGIVHDQSASGATLFIEPEVIVEMNNKLR 237 Query 252 KAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLK 311 + + E E +RIL L++ E ++ ++E LT+ D + A+ + A + I P Sbjct 238 ELRLREEREVERILYVLTEQVSFAVEALVENTEALTELDFMFAKAQLAWSMKAICPRIND 297 Query 312 PRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMK 371 +N R A+HPL + + + D+ L + Q V++GPN GGKTV++K Sbjct 298 RGYVNMR----KARHPL--IPREVVVPVDVELGGEYQA------IVVTGPNTGGKTVSLK 345 Query 372 TVGIIALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQA 430 T+G+++LM AGL + ++ +E+ + +IF ++GD Q+ E+ LSTFS H+ I +I + Sbjct 346 TIGLLSLMTMAGLHIPAEEESEMTVFSSIFADIGDEQSIEQSLSTFSSHMTNIIQILAKM 405 Query 431 NELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNG 490 ++ SL+L DE GTDP G A+A S +++ A ++ TTH+S LK A + N Sbjct 406 DDKSLVLFDELGAGTDPTEGAALAMSIIDHVIDSGARLVATTHYSELKAYAYDRPEVINA 465 Query 491 SMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKEL 550 S+EF+ L PTY+LL G+PG+S A +A R+GL +II AR E ++E+++ L Sbjct 466 SVEFDVQTLRPTYRLLIGVPGRSNAFAIARRLGLPEHIIDVARGSISEEDNQVESMIASL 525 Query 551 QLKRIEINEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVE---NYRNKLQKRLNAF 607 + R + +++ + K +++ ELR L E + + KR+ Sbjct 526 ERNR--------------KSAEADRLAAKAARQEAEELRTQLEEERAQFAEEKNKRMERA 571 Query 608 ENRLEIRERQFEKQKETLLREIHEI 632 E+ I + +++ ET++RE+ E+ Sbjct 572 EDEARIAVQLAKEEAETIIRELREM 596 Range 2: 553 to 758 Score:45.1 bits(105), Expect:0.003, Method:Compositional matrix adjust., Identities:54/232(23%), Positives:107/232(46%), Gaps:37/232(15%) Query 703 LDEKAERFRAPKNMSSRSLLDEARMSLQSLKNSFDDIEEQLHDDLDTLQEIEKSTKEKVR 762 L+E+ +F KN DEAR+++Q K + I +L + + EI++ ++ Sbjct 553 LEEERAQFAEEKNKRMERAEDEARIAVQLAKEEAETIIRELREMMAEGMEIKE---HRLI 609 Query 763 SAQQTAKEAQSQGRSPEFWKPGMSAKSTKLK-----------EKGVVLKTADSKGNIECQ 811 A++ A + + KP + ++T++K +KG VL+ +++ + Q Sbjct 610 DAKKRLGNAVLELEKEKVKKPAKAVRATQIKVGDEVMVTSFGQKGTVLEKVNNEEFL-VQ 668 Query 812 FGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHG 871 GI+K+K+ ++ N ++ ++ ++P S VK + N K +L+ Sbjct 669 IGIMKMKVKRDDMHVQN-SIQQKPQAAPYTS---VKRRSDNIKMDLDLR----------- 713 Query 872 GNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHL 923 G V++S+ ++D LD + V IIHGHG G +++ V +L Sbjct 714 -------GYNVEDSIREIDQFLDDALLAGLHSVSIIHGHGTGVLRKGVHEYL 758 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Oceanobacillus iheyensis HTE831] Sequence ID: Q8EPI1.1 Length: 782 Range 1: 1 to 564 Score:249 bits(635), Expect:4e-69, Method:Compositional matrix adjust., Identities:171/582(29%), Positives:294/582(50%), Gaps:29/582(4%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 + + L L++ +T+ L G A K+ +P L+ N T E + Sbjct 1 MNERVLRVLDFKSVTEMLKGQAETALGKERAKITKPLSSLDKINMLQDETDEAAKIIRLN 60 Query 75 NGISLESFDFTLFQNFLQR---GALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPN 131 I L T + ++R G +LS + TL ++++ E P Sbjct 61 QAIPLGGI--TDIRASVKRSSIGGILSTDECLDVANTLYGSRNVKNTI--ENMEELDIPI 116 Query 132 LFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKK 191 L L + P EL + +D G+I+ AS +L S RS + + +I E+L+ + Sbjct 117 LKELVEHITPIRELEQAIKSCIDDHGHIMDGASSQLRSIRSSIRTLESRIREKLENYTRS 176 Query 192 QDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLE 251 L D + +R+ YVLP++ + + I GI S SG T+F+EP+A+ L Sbjct 177 NS--KMLSDAIITIRNDRYVLPVKQEYRGAIGGIVHDQSASGQTLFMEPKAVVDINNSLH 234 Query 252 KAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLK 311 ++++ ++E +RIL++LS +D+L + ++LT D I AR K A + +P+ Sbjct 235 ESKSKEQLEIERILKDLSNQVASYEQDLLENVKVLTNIDFIYARGKLAQAMKASRPKM-- 292 Query 312 PRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMK 371 + + A+HP+ ++ + +AND+ + V++GPN GGKTV +K Sbjct 293 --NDEGYMKMQQARHPMIPID--EVVANDIEFGREYTS------IVITGPNTGGKTVTLK 342 Query 372 TVGIIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQA 430 VG+ LMA++GL V + D E+ ++ +F ++GD Q+ E++LSTFS H+ I I ++ Sbjct 343 LVGLCTLMAQSGLQVPALDGCEMPVFDEVFADIGDEQSIEQNLSTFSSHMTNIVDIMKKI 402 Query 431 NELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNG 490 + SL+L DE GTDP G A+A + L+ K+A VI TTH+ LK N + N Sbjct 403 TDRSLVLFDELGSGTDPQEGAALAMAILDEVISKQARVIATTHYPELKAYGYNREQVVNA 462 Query 491 SMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKEL 550 S+EF L PTY+LL G+PG+S A +++ R+GL I++A++ G +S+ +EN++ L Sbjct 463 SVEFNVETLKPTYRLLIGVPGRSNAFDISTRLGLERATIERAKSLIGVDSKSVENMIASL 522 Query 551 QLKRIEINEE-------LTKQNLLTQKLDSEFKSLKNEKEQL 585 + +E ++ L + L L+ E+ + +KE+L Sbjct 523 EKSHLEAEQDYEQAHDVLLESEKLRNALEHEWNLFEQKKEKL 564 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Lachnoclostridium phytofermentans ISDg] Sequence ID: A9KR74.1 Length: 796 Range 1: 1 to 540 Score:248 bits(634), Expect:6e-69, Method:Compositional matrix adjust., Identities:171/555(31%), Positives:279/555(50%), Gaps:24/555(4%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 + + AL LE++KI + L+ A ++ +L P ++LED T++ L Sbjct 1 MNEKALRTLEYHKIIEKLSALAGSSLGREKCHQLLPLVKLEDIVQMQQETTDALTRLYAK 60 Query 75 NGISLESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFF-------KYEKSRA 126 +S D L+ GA L L +I L +++ + E++ Sbjct 61 GTLSFSGIPDIRDTLMRLEIGASLGAGELLKISSVLTATLRAKNYGYNQKNNEETEEAAQ 120 Query 127 TKYPNLFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLD 186 F+L L P ++ ++ + + + I ASP L S R +++ KI E L Sbjct 121 DTLTERFHLLEPLSP---INNEIRRCIISEEEIADDASPGLKSVRRQIKITNDKIHESLG 177 Query 187 EILKKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQ 246 IL + LQD + +R+G Y LPI+ + K+ +G+ S +GST FIEP A+ Sbjct 178 SILNSASTKGMLQDAIITMRNGRYCLPIKQEYKNTFQGMMHDQSSTGSTAFIEPMAIVKL 237 Query 247 QAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIK 306 +L + + E ++IL ELS ++ + L + D I AR + + + Sbjct 238 NNELAELAVREQEEIEKILAELSNLVATEKYNLKYNQTTLAELDFIFARAGLSKNMKASQ 297 Query 307 PEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGK 366 P F +N + +HPL ++ KK + D++ K + V++GPN GGK Sbjct 298 PHFNNRHYINIK----KGRHPL--IDPKKVVPIDIYFGDKFD------LLVITGPNTGGK 345 Query 367 TVAMKTVGIIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKR 425 TV++KTVG+ LM +AGL + + D +E+ +E ++ ++GD Q+ E+ LSTFS H+ Sbjct 346 TVSLKTVGLFTLMGQAGLHIPAFDGSELSIFEEVYADIGDEQSIEQSLSTFSSHMTNTVS 405 Query 426 ISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDS 485 I E ANE SL+L DE GTDP G A+A + L Y +K + TTH+S LK A + Sbjct 406 ILEHANENSLVLFDELGAGTDPTEGAALAMAILSYLHQRKIRTMATTHYSELKIFALSTD 465 Query 486 RFFNGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMEN 545 N EF L PTY+LL GIPG+S A ++ ++GL+N II+KAR + G++ E E+ Sbjct 466 GVSNACCEFSVETLQPTYRLLIGIPGKSNAFAISSKLGLSNYIIEKAREFIGTKDESFED 525 Query 546 LLKELQLKRIEINEE 560 ++ L+ RI + ++ Sbjct 526 VISNLEASRIAMEKD 540 Range 2: 642 to 795 Score:75.9 bits(185), Expect:1e-12, Method:Compositional matrix adjust., Identities:59/175(34%), Positives:83/175(47%), Gaps:24/175(13%) Query 778 PEFWKPGMSAKSTKLKEKGVVLKTADSKGNIECQFGILK--IKIPYHELIPGNETLPKQN 835 P +K G S L KG V ++KG++ Q GIL+ + I ELI Sbjct 642 PSDFKVGDSVHVISLNLKGSVSTLPNAKGDLYVQMGILRSLVNISDLELI---------- 691 Query 836 SSSPQKSSLNVKPLTKNFKKYHNLQDS-EIPPTLQHGGNTIQLLGCTVDESLDKLDIELD 894 + ++ K LTK + S I P L ++G VDE+L +D LD Sbjct 692 ----DEETIVAKALTKTQSGKIRMSKSMSISPELN-------IIGKRVDEALPLVDKYLD 740 Query 895 KMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 + + +V IIHG G G +KE+V HL+ ++Y +R G GEG GVTIVEF Sbjct 741 DAYLAHLPQVTIIHGRGTGALKEAVHAHLKRTNYVKGYRVGGFGEGDHGVTIVEF 795 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Alkaliphilus oremlandii OhILAs] Sequence ID: A8MHU4.1 Length: 790 Range 1: 1 to 610 Score:248 bits(633), Expect:7e-69, Method:Compositional matrix adjust., Identities:191/625(31%), Positives:322/625(51%), Gaps:31/625(4%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 + + +L LE+NKI L T ++ EL+P E + TSE + Sbjct 1 MNERSLRVLEYNKIIHMLEDKCTSSLGREKLKELKPISNFEQITTWQKETSEAQSILIHR 60 Query 75 NGISLESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLF 133 I L D + + + G+ L P L Q+ TL +++F K +K +T YP + Sbjct 61 GNIPLGGIHDVSQYLRRTEIGSYLDPGQLLQLKETLAAARRMKTFLKDDKKEST-YPIIQ 119 Query 134 NLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQD 193 L N++ + K+ + + + +ASPEL + R ++ I +L+ I+ Sbjct 120 ELGNNISSLKHIEDKIELCIISETELSDNASPELRNIRRQISSKNDAIRNKLNSIITSAS 179 Query 194 IRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKA 253 + LQD + +R YV+P++ + + I G+ S SG+T+F+EP A+ QL++ Sbjct 180 NQKYLQDPIITMRQDRYVVPVKQEHRGNIPGLIHDQSSSGATIFVEPMAVVELNNQLKEL 239 Query 254 QNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPR 313 + +VE +RIL E++ +DI S+ IL + D I A+ K + + ++P Sbjct 240 RLKEQVEIERILMEIAAMIAERSDDIKSNQIILKELDFIFAKGKLSVEMRAVEPVL---- 295 Query 314 DLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 + N + S+ N +HPL L + K + N + L GE + V++GPN GGKTV +KT+ Sbjct 296 NTNKKISIKNGRHPL--LPSNKVVPNTMWL-----GE-DFHTLVITGPNTGGKTVTLKTL 347 Query 374 GIIALMAKAGLFVSCDKA-EIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANE 432 G++ LMA++GL V D ++ ++ +F ++GD Q+ E+ LSTFS H+ I I + E Sbjct 348 GLLTLMAQSGLHVPADYGTKLAIFDQVFADIGDEQSIEQSLSTFSSHMTNIVNIMDNVTE 407 Query 433 LSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSM 492 SL+L DE GTDP G A+A + L + TTH+S LK A + N S+ Sbjct 408 QSLVLFDELGAGTDPTEGAALAMAILNSLREMGTVTVATTHYSELKQYALSTEGVENASV 467 Query 493 EFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQL 552 EF+ + L PTYKLL G+PG+S A E++ ++GL++ +IQ+++ E + E+LL+ ++ Sbjct 468 EFDVNTLSPTYKLLIGVPGKSNAFEISRKLGLSDFLIQRSKELLTREDIQFEDLLQNIEK 527 Query 553 KRIEI---NEELTKQNLLTQKLDSEF----KSLKNEKEQLSELRGDLVENYRNKLQKRLN 605 R +E + + TQKL E+ + L+ +KE+L + E Y+ Q +L+ Sbjct 528 NRSTAEKEKDEAARLRMETQKLREEYYEKKQQLQTQKEKL--ISDAKREAYKIVKQAKLD 585 Query 606 A---FEN----RLEIRERQFEKQKE 623 A EN R E+ E++ K+ E Sbjct 586 ADEIVENLKTLRAELEEKEMNKKIE 610 Range 2: 574 to 789 Score:41.2 bits(95), Expect:0.043, Method:Compositional matrix adjust., Identities:62/238(26%), Positives:101/238(42%), Gaps:34/238(14%) Query 724 EARMSLQSLKNSFDDIEEQLHDDLDTLQEIEKSTK-EKVRS--AQQTAKEAQSQG----- 775 EA ++ K D+I E L L+E E + K E+ R + Q K A++ G Sbjct 574 EAYKIVKQAKLDADEIVENLKTLRAELEEKEMNKKIEEARKNLSDQMGKLAENMGEKLVL 633 Query 776 ----RSPEFWKPGMSAKSTKLKEKGVVLKTADSKGNIECQFGILKIKIPYHELIPGNETL 831 + P+ K G S L + G V+ D+ G ++ Q GI+K+ + L E + Sbjct 634 KTNKKPPKNLKIGESVNILSLNQIGYVILPEDANGEVQLQVGIMKVNMHVSNL----ERI 689 Query 832 PKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDI 891 ++ + VK +N K I + G ++E++ +D Sbjct 690 KEEKDTKKTGVGKIVKSKAENIKM------------------EIDVRGQNLEEAMLNVDK 731 Query 892 ELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 LD + + V IIHG G G + +++ L+ + FR G +GEGG GVTIV Sbjct 732 YLDDAYIAGLTHVTIIHGVGTGVLSAGLKQMLKKHKHTKSFREGEYGEGGMGVTIVHL 789 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Bacillus licheniformis DSM 13 = ATCC 14580] Sequence ID: Q65GE2.1 Length: 785 Range 1: 1 to 582 Score:247 bits(631), Expect:1e-68, Method:Compositional matrix adjust., Identities:180/599(30%), Positives:305/599(50%), Gaps:24/599(4%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSE---MLDLN 71 ++Q AL+ LE++K+ + L A K+ EL+P LE+ E +L L Sbjct 1 MQQKALSALEFHKVKEQLTEHAASSLGKEMLLELKPSRSLEEVKKLQEEVDEAGTVLRLK 60 Query 72 TETNGISLESFDFTLFQNFLQR---GALLSPQALYQILITLKLCHSIQSFFKYEKSRATK 128 S T + L+R G++LSP L +I L ++ F + + Sbjct 61 G-----SAPFGGLTDIRKALRRAEIGSILSPAELTEISGLLYAAKQMKHFLEGLFEDGVE 115 Query 129 YPNLFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEI 188 P L + L P EL +N +D G +L AS L R++L + +I ++L+ + Sbjct 116 IPYLHQYAEKLIPLSELERDINSCIDDHGEVLDHASETLRGIRTQLRTLESRIRDRLESM 175 Query 189 LKKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQA 248 L+ + L D + +R+ +V+P++ + +S GI S SG+T+FIEPQA+ Sbjct 176 LRSSSAQKMLSDTIITIRNDRFVIPVKQEYRSSYGGIVHDQSSSGATLFIEPQAIVDMNN 235 Query 249 QLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPE 308 L +A+ + + E +RILR L++ ++ ++L D I A+ K+A +KP Sbjct 236 ALRQAKVNEKQEIERILRVLTEKTAEHTNELFHDVKVLQTLDFIFAKAKYAKATKAVKPA 295 Query 309 FLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTV 368 + + LI A+HPL L+ + + ND+ L GE + V++GPN GGKTV Sbjct 296 V----NADGYVRLIQARHPLLPLD--EVVPNDIELG----GEYT--TIVITGPNTGGKTV 343 Query 369 AMKTVGIIALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRIS 427 +KT+G++ +MA++GL V ++ +E ++ +F ++GD Q+ E+ LSTFS H+ I I Sbjct 344 TLKTLGLLTMMAQSGLHVPAEEGSETAVFDQVFADIGDEQSIEQSLSTFSSHMVNIVDIL 403 Query 428 EQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRF 487 + E SL+L DE GTDP G A+A S L+ A VI TTH+ LK N Sbjct 404 KDMTENSLVLFDELGAGTDPQEGAALAISILDEVCQTGARVIATTHYPELKAYGYNRENV 463 Query 488 FNGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLL 547 N S+EF+ L PTYKLL G+PG+S A E+++R+GL + +I +A+ +E ++ ++ Sbjct 464 INASVEFDIDTLSPTYKLLIGVPGRSNAFEISKRLGLPDYLIGRAKAEMTAEHNEVDTMI 523 Query 548 KELQLKRIEINEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNA 606 L+ + EL + + + ++ + L+ + + E + L E K +++ A Sbjct 524 ASLEDSKKRAEAELKETEAIRAEAEALHRDLQQQISEWQEKKDKLYEEAEQKAAEKVKA 582 Range 2: 568 to 784 Score:60.5 bits(145), Expect:6e-08, Method:Compositional matrix adjust., Identities:77/251(31%), Positives:112/251(44%), Gaps:38/251(15%) Query 703 LDEKAERFRAPKNMSSRSLLDEARMSLQSLK---NSFDDIEEQLHDDLDTLQEIEKSTKE 759 L E+AE+ A K ++ D+ SL+ +K +F D E L E +K +E Sbjct 568 LYEEAEQKAAEKVKAAMKEADDIIQSLRMIKEDHKAFKDHE---------LIEAKKRLEE 618 Query 760 KVRSAQQTAKEAQSQGRSPEFWKPGMSAKSTKLKEKGVVL-KTADSKGNIECQFGILKIK 818 V S ++ K AQ + E KPG K +KG +L KT ++ N+ Q GILK+K Sbjct 619 AVPSFEKAKKPAQKKTDKREL-KPGDEVKVLTFGQKGTLLEKTGAAEWNV--QIGILKMK 675 Query 819 IPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLL 878 + +L E L QK+ VK K YH +L+ + L Sbjct 676 VKEKDL----EFLKSAPEPEKQKTIAAVKG-----KDYH--------VSLE-----LDLR 713 Query 879 GCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHG 938 G + +L +++ LD RV IIHG G G +++ V+ L+ R G G Sbjct 714 GERFENALHRVEKYLDDAVLAGYPRVSIIHGKGTGALRKGVQDLLKSHRNVKNSRFGEAG 773 Query 939 EGGDGVTIVEF 949 EGG GVTIVE Sbjct 774 EGGSGVTIVEL 784 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Clostridium kluyveri DSM 555] Sequence ID: A5N245.1 Length: 786 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Clostridium kluyveri NBRC 12016] Sequence ID: B9E5U7.1 Length: 786 Range 1: 1 to 529 Score:247 bits(631), Expect:1e-68, Method:Compositional matrix adjust., Identities:167/551(30%), Positives:294/551(53%), Gaps:31/551(5%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDL---- 70 + + +L LE+ K+ L + +K L+P+ + D T E L L Sbjct 1 MNEKSLRILEFYKVKDELKKYTNTNAAKDLVDNLKPYDNIHDVREHLEETEEALKLIISR 60 Query 71 -NTETNGISLESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKY 129 N +G+ +D Q+G++L P +++I LK + + K K + Sbjct 61 GNPPFDGV----YDVRQGVKMAQKGSILMPAQIFRIGAILKASRRFEKYIK-AKGEGEGF 115 Query 130 PNLFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEIL 189 + ++ + L K+ S++ + I AS L++ R + + ++++ ++ Sbjct 116 RIIEDICQGIVLLKGLEDKIFISIESEDEISDRASSLLYNIRKSIRDKNASVRDKVNSLI 175 Query 190 KKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQ 249 + + + LQD+++ +R YVLP+RA+ K+ + G+ S SGST++IEP AL + Sbjct 176 R--NYSSYLQDNLYTIRGDRYVLPVRAENKALVPGLVHDQSSSGSTLYIEPMALVNLNNE 233 Query 250 LEKAQNDVEVEEQRILRELSKDCYLVHEDIL---SSSEILTQFDNIIARTKFAGVIHGIK 306 +++ + + E RIL ELSK+ +H++I+ ++++I+ + D I A+ KF ++G Sbjct 234 IKELKLKEKAEIDRILYELSKE---IHDNIVVIKNNADIIWELDFIFAKAKFGSELNGNI 290 Query 307 PEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGK 366 P + N ++ +HPL ++ K + D+++ V++GPN GGK Sbjct 291 PIV----NDNCIIDIVEGRHPL--IDRKTVVPMDVYMGKDFT------CLVITGPNTGGK 338 Query 367 TVAMKTVGIIALMAKAGLFVSC-DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKR 425 TVA+KT+G++ +MA +GL + + + + + IF ++GD Q+ E++LSTFS H+ I Sbjct 339 TVALKTMGLLHIMALSGLMIPARENSTVGFFTEIFADIGDEQSIEQNLSTFSSHMTNIIN 398 Query 426 ISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDS 485 I ++E SLIL DE GTDP G A+A S LE + + ++ TTH+S LK A + Sbjct 399 IINNSDEKSLILFDELGAGTDPTEGAALAVSILENLKDRGSMIVATTHYSELKAYALKSN 458 Query 486 RFFNGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMEN 545 N S+EF+ L PTYKL+ GIPG+S A E+++R+GL II+ AR SE+ + E+ Sbjct 459 GVENASVEFDVDTLKPTYKLMIGIPGKSNAFEISKRLGLPEFIIKAARENIASEALKFED 518 Query 546 LLKELQLKRIE 556 L++ LQ KRI+ Sbjct 519 LIQSLQEKRIK 529 Range 2: 607 to 785 Score:73.6 bits(179), Expect:6e-12, Method:Compositional matrix adjust., Identities:60/201(30%), Positives:95/201(47%), Gaps:23/201(11%) Query 750 LQEIEKSTKEKVRSAQQTAKEAQSQ-GRSPEFWKPGMSAKSTKLKEKGVVLKTADSKGNI 808 L+E K K+K+ + ++ +A+S+ G+ + K G L +K +VL D+KG + Sbjct 607 LEERRKMLKDKLENVEENLYKAKSEDGQRLKSVKEGEEVFIPSLNQKVLVLSKPDNKGEV 666 Query 809 ECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTL 868 + Q GI+KI + EL +P+ S+ N K K+ NL L Sbjct 667 QVQAGIMKISVNLKEL------------RAPKGSTKNT---DKKLKREANLN-------L 704 Query 869 QHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSY 928 + ++ L G E+ D LD + + V IIHG G G ++ S+ L+ S+ Sbjct 705 RSVATSVDLRGMDSIEAAYITDKYLDDAYVAGLKEVTIIHGKGTGILRSSITNMLKSHSH 764 Query 929 KLRFRGGRHGEGGDGVTIVEF 949 +R G +GEGG GVTIVE Sbjct 765 VKNYRIGEYGEGGTGVTIVEL 785 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Lactobacillus johnsonii NCC 533] Sequence ID: Q74KU8.1 Length: 788 Range 1: 6 to 660 Score:246 bits(629), Expect:3e-68, Method:Compositional matrix adjust., Identities:196/677(29%), Positives:341/677(50%), Gaps:63/677(9%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISL 79 + +LE+N+I + L+ A +K+ L P ++ T + ++ + + Sbjct 6 IEKLEYNRIIKQLSDLAITVPAKEQALTLMPSSNFDEVKKSIDQTRVLSNVLRVKGPMPI 65 Query 80 ESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFK-YEKSRATKYPNLFNLSN 137 F D L+ A L+ + L I + L L + F E+ P L N Sbjct 66 TDFKDVRASLKRLKVKANLNGEELGNIFLILSLAKDVSQFTADLEEREIDTRPIEKTLKN 125 Query 138 DLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNA 197 P +L KLN++++ DG + +AS +L R ++ + I +++ + + + Sbjct 126 LAIPE-DLFKKLNQAIEYDGTVKDTASSKLMQLRHDIQSNETDIKNHMNDYISGKHTQ-Y 183 Query 198 LQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDV 257 L +++ +RDG YVLP++ + K+ G+ S SG T+F+EPQA+ + L Q ++ Sbjct 184 LSENIVTIRDGRYVLPVKQEYKNKFGGVVHDQSASGQTLFVEPQAVLV----LNNRQQNL 239 Query 258 EVEEQ----RILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPR 313 +E+ RIL ELS+ + ++I ++++ LTQ D + A++K A + +P + Sbjct 240 MAQERQEIHRILIELSELAGMYQKEIKNNADALTQLDFLSAKSKLAKAMKATEPVLNQDH 299 Query 314 DLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 + R A+HPL ++ KK + N++ L TS +++GPN GGKT+ +KT+ Sbjct 300 VIKLR----KARHPL--IDPKKVVPNNIELG------TSFDTMLITGPNTGGKTITLKTL 347 Query 374 GIIALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANE 432 G++ LMA+AGLF++ ++ +++ + I+ ++GD Q+ E+ LSTFS H+ QI +I + E Sbjct 348 GLLQLMAQAGLFITAEEGSQLTVFNEIYADIGDEQSIEQSLSTFSSHMDQIIKIMKDVTE 407 Query 433 LSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSM 492 L+L+DE GTDP G ++A + L+ +A + ITTH+ LK N +R N SM Sbjct 408 DDLVLIDELGAGTDPEEGASLAIAILDDLRGAQAKIAITTHYPELKLYGYNRARTTNASM 467 Query 493 EFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKEL-- 550 EF+ KL PTY+L GIPGQS A +A ++G+N ++ KAR+ E + +++ L Sbjct 468 EFDLKKLAPTYRLRIGIPGQSNAFAIAHQLGMNEVVVDKARSLMNDEDSDINKMIERLTE 527 Query 551 QLKRIEINEELTKQNL---------LTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQ 601 Q K E E KQN+ L LD + ++ + E+ E +++ R K Sbjct 528 QTKAAEQLHETLKQNVDQSITLKRQLQNGLDWYNQQVQKQLEKAQEKADEMLAKKRQKAD 587 Query 602 KRLNAFE---------------------NRLEIRERQFEKQKETLLREI--HEISHKETI 638 K +N E N+LE RE Q Q + L RE H++S +T+ Sbjct 588 KIINDLEEQRRAGGQVRTNKVIEAKGALNKLE-RENQNLAQNKVLQREKRRHDVSVGDTV 646 Query 639 ENNLEISQAQQNNLSEK 655 + +S QQ +++K Sbjct 647 K---VLSYGQQGVITKK 660 Range 2: 643 to 785 Score:45.8 bits(107), Expect:0.002, Method:Compositional matrix adjust., Identities:42/165(25%), Positives:77/165(46%), Gaps:23/165(13%) Query 784 GMSAKSTKLKEKGVVLKT-ADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKS 842 G + K ++GV+ K AD + E Q GILK+K+ ++ E + Q ++P+K+ Sbjct 643 GDTVKVLSYGQQGVITKKLADHE--FEVQIGILKVKVTDRDV----EKISTQ--AAPKKA 694 Query 843 SLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVD 902 V+ +++ + + + L G +E+L LD +D ++ Sbjct 695 ERAVRS-SRDLRS-------------TRASSELDLRGQRYEEALTNLDRYIDSSLLAGLN 740 Query 903 RVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIV 947 V IIHG G G I+ V+++L+ + + + +GG G TIV Sbjct 741 TVTIIHGIGTGAIRNGVQQYLKRNRHVKSYSYAPANQGGTGATIV 785 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Caldanaerobacter subterraneus subsp. tengcongensis MB4] Sequence ID: Q8R9D0.1 Length: 790 Range 1: 4 to 529 Score:246 bits(627), Expect:5e-68, Method:Compositional matrix adjust., Identities:170/545(31%), Positives:285/545(52%), Gaps:24/545(4%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 +R+ L LE++KI + +A ++ ++E +L+ F +E + Sbjct 4 MREKTLKSLEFDKIVKLIANECDSELGREKVFDIEIKKDLKAIEFELDLLNEAVKFIYSY 63 Query 75 NGISLESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFN 134 IS D Q +L + L I L L +++ FK R + L Sbjct 64 GDISFSFQDIREHVKKAQIDYILYNRELLGIKNFLSLVEEVKAHFKSLYDRED-FLLLKE 122 Query 135 LSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDI 194 L P L K+ +V + I ASP L + R + KI L+ I+ + Sbjct 123 FDKRLVPLKSLKEKIENTVISEDEISDEASPVLKAIRRQKASINEKIKSTLNSIISTR-- 180 Query 195 RNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQ 254 + LQ+ + +R G YV+P++ + ++ +GI S +G+T+FIEP +Q L Sbjct 181 QKELQEPIITMRQGRYVVPVKQEYRNVFKGIIHDQSSTGATLFIEP----IQVVDLNNEL 236 Query 255 NDVEVEEQ----RILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFL 310 ++E++EQ RIL ELS++ E I E++++ D + A+ +++ I +PE Sbjct 237 RELELKEQKEIERILFELSQEVKKNAEAIFKDVEVVSELDFLFAKARYSIKIKASRPEL- 295 Query 311 KPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAM 370 + + +L A+HPL ++ +K + D+H+ + V++GPN GGKTV + Sbjct 296 ---NTSGYVNLKKARHPL--IDPEKVVPIDIHIGREFT------TLVITGPNTGGKTVTL 344 Query 371 KTVGIIALMAKAGLFVSCD-KAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQ 429 KTVG++ LMA AG+ + + K++I +E++FV++GD Q+ E+ LSTFS H+ I I ++ Sbjct 345 KTVGLLTLMAMAGINIPAEEKSQISIFEDVFVDIGDEQSIEQSLSTFSSHMTNIVSILKK 404 Query 430 ANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFN 489 N+ SL+LLDE GTDP G A+A S L++ I TTH+S LK A N Sbjct 405 VNKNSLVLLDELGAGTDPLEGSALAMSILDFLHRTGCRTIATTHYSELKQYALKTKGVEN 464 Query 490 GSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKE 549 S+EF+ L PTY+L+ GIPG+S A E++ R+GL+ II+ A++Y E+ R E+++K+ Sbjct 465 ASVEFDVETLRPTYRLIIGIPGRSNAFEISRRLGLSEEIIENAKSYMSGEAIRFEDVIKD 524 Query 550 LQLKR 554 ++ KR Sbjct 525 VEEKR 529 Range 2: 632 to 787 Score:89.0 bits(219), Expect:8e-17, Method:Compositional matrix adjust., Identities:55/177(31%), Positives:89/177(50%), Gaps:21/177(11%) Query 773 SQGRSPEFWKPGMSAKSTKLKEKGVVLKTADSKGNIECQFGILKIKIPYHELIPGNETLP 832 S G+ P+ K G + L + G+VL D+ GN+E Q GILK+ + L Sbjct 632 SYGKIPDSLKAGQTVYIVPLDQNGIVLSPPDASGNVEVQAGILKMTVHISNL-------- 683 Query 833 KQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIE 892 K + + K + ++ N + I P+L + G T+D++L +++ Sbjct 684 ------RVKEEQEQEEVKKGYSRFINEKAKSISPSLD-------VRGMTLDDALLEVEKY 730 Query 893 LDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 +D + +++V IIHG G G ++ + + L +S Y FR GR+GEGGDGVTIVE Sbjct 731 IDDAYLAGLNQVTIIHGRGTGVLRTGIAKFLRNSKYVKSFRLGRYGEGGDGVTIVEL 787 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Halalkalibacterium halodurans C-125] Sequence ID: Q9K8A0.1 Length: 785 Range 1: 4 to 527 Score:245 bits(626), Expect:8e-68, Method:Compositional matrix adjust., Identities:162/543(30%), Positives:280/543(51%), Gaps:29/543(5%) Query 19 ALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSE---MLDLNTET- 74 L LE+ K+ + L + +K +L P + + T E ML L Sbjct 4 VLRVLEYEKMKKQLLEHVSSSLGRKKVEQLTPSTDFNKVKLWQAQTQEGANMLRLKGHVP 63 Query 75 -NGISLESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFK--YEKSRATKYPN 131 GI FD + G LL L ++ T+ ++ F + E+ A P Sbjct 64 LGGI----FDIKPHLKRAKIGGLLHASELLEVASTIYGGRQLKKFIETMIEEEEA-DLPL 118 Query 132 LFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKK 191 L + + P +L + + +D +G++L SASP L + R ++ + + +L+ I + Sbjct 119 LGEFARQIVPLTDLERAIKQCIDDNGHVLDSASPTLRTLRHQIRSFEANVRSKLEGITRS 178 Query 192 QDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLE 251 + L D + +R+ YV+P++ + + GI S SG+T+F+EPQA+ QL Sbjct 179 SNTAKMLSDAIVTIRNDRYVIPVKQEYRGAFGGIVHDQSASGATLFVEPQAVVEINNQLR 238 Query 252 KAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLK 311 +A+ + E +RIL ELS +D+ + ++L + D I+AR + I +P Sbjct 239 EAKAKEQREIERILSELSMQVSEHVDDLFVNVDVLAELDFIMARAHYGKAIRATQP---- 294 Query 312 PRDLNPRFSLI--NAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVA 369 LN R L+ +HPL + + + + D+ L S V++GPN GGKTV Sbjct 295 --ILNNRGYLLIKQGRHPL--IPDDEIVPIDIELG------HSYSSLVITGPNTGGKTVT 344 Query 370 MKTVGIIALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISE 428 +KT+G++ LMA++GL V ++ +E+ ++++F ++GD Q+ E+ LSTFS H+ I I Sbjct 345 LKTIGLLTLMAQSGLHVPAEEESELAVFKHVFADIGDEQSIEQSLSTFSSHMTNIVDILG 404 Query 429 QANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFF 488 + + SL+L DE GTDP G A+A + L+ + A ++ TTH+S LK A N Sbjct 405 KVDHESLVLFDELGAGTDPTEGAALAIAILDDVYRRGARIVATTHYSELKGYAYNREGVM 464 Query 489 NGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLK 548 N S+EF+ L PTY+LL G+PG+S A +++R+GL II++A+ + ++ ++E+++ Sbjct 465 NASVEFDVETLSPTYRLLIGVPGRSNAFAISKRLGLEEKIIEQAKAHIDEDASQVESMIA 524 Query 549 ELQ 551 L+ Sbjct 525 SLE 527 >RecName: Full=Putative endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Bacillus subtilis subsp. subtilis str. 168] Sequence ID: P94545.2 Length: 785 Range 1: 1 to 593 Score:244 bits(622), Expect:2e-67, Method:Compositional matrix adjust., Identities:187/631(30%), Positives:319/631(50%), Gaps:48/631(7%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 ++Q L+ LE++K+ + + G A K+ EL+P +++ E D+ Sbjct 1 MQQKVLSALEFHKVKEQVIGHAASSLGKEMLLELKPSASIDEIKKQLDEVDEASDI---- 56 Query 75 NGISLES----FDFTLFQNFLQR---GALLSPQALYQILITLKLCHSIQSFFKYEKSRAT 127 I L + L+R G++LSP +I L ++ F Sbjct 57 --IRLRGQAPFGGLVDIRGALRRAEIGSVLSPSEFTEISGLLYAVKQMKHFITQMAEDGV 114 Query 128 KYPNLFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDE 187 P + + L +L +N +D G +L AS L R++L + ++ ++L+ Sbjct 115 DIPLIHQHAEQLITLSDLERDINSCIDDHGEVLDHASETLRGIRTQLRTLESRVRDRLES 174 Query 188 ILKKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQ 247 +L+ L D + +R+ +V+P++ + +S GI S SG+T+FIEPQA+ Sbjct 175 MLRSSSASKMLSDTIVTIRNDRFVIPVKQEYRSSYGGIVHDTSSSGATLFIEPQAIVDMN 234 Query 248 AQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKP 307 L++A+ + E +RILR L++ E++ ++L D I A+ ++A + KP Sbjct 235 NSLQQAKVKEKQEIERILRVLTEKTAEYTEELFLDLQVLQTLDFIFAKARYAKAVKATKP 294 Query 308 EFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKT 367 + L A+HPL L + +AND+ L V++GPN GGKT Sbjct 295 IM----NDTGFIRLKKARHPL--LPPDQVVANDIELGRDFS------TIVITGPNTGGKT 342 Query 368 VAMKTVGIIALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRI 426 V +KT+G++ LMA++GL + D+ +E +E++F ++GD Q+ E+ LSTFS H+ I I Sbjct 343 VTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNIVGI 402 Query 427 SEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSR 486 EQ NE SL+L DE GTDP G A+A S L+ A V+ TTH+ LK N Sbjct 403 LEQVNENSLVLFDELGAGTDPQEGAALAMSILDDVHRTNARVLATTHYPELKAYGYNREG 462 Query 487 FFNGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENL 546 N S+EF+ L PTYKLL G+PG+S A E+++R+GL ++II +A++ +E ++ + Sbjct 463 VMNASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLPDHIIGQAKSEMTAEHNEVDTM 522 Query 547 LKELQLKRIEINEELTKQNLLTQKLDSEFKSLKNEKEQL-SELRGDLVENYRNKLQKRLN 605 + L+ + EEL SE +S++ E E+L EL+ ++E LN Sbjct 523 IASLEQSKKRAEEEL-----------SETESIRKEAEKLHKELQQQIIE---------LN 562 Query 606 AFENR-LEIRERQFEKQKETLLREIHEISHK 635 + +++ LE E+Q ++ + ++E +I H+ Sbjct 563 SKKDKMLEEAEQQAAEKVKAAMKEAEDIIHE 593 Range 2: 639 to 784 Score:52.8 bits(125), Expect:1e-05, Method:Compositional matrix adjust., Identities:48/170(28%), Positives:78/170(45%), Gaps:25/170(14%) Query 781 WKPGMSAKSTKLKEKGVVL-KTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSP 839 +KPG K +KG +L KT ++ N+ Q GILK+K+ +L E + +++ P Sbjct 639 FKPGDEVKVLTFGQKGTLLEKTGGNEWNV--QIGILKMKVKEKDL----EFI--KSAPEP 690 Query 840 QKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRM 899 +K + K++ H + L G + +L +++ LD Sbjct 691 KKEKMITAVKGKDY----------------HVSLELDLRGERYENALSRVEKYLDDAVLA 734 Query 900 DVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 RV IIHG G G +++ V+ L++ R G GEGG GVT+VE Sbjct 735 GYPRVSIIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTVVEL 784 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Anaeromyxobacter sp. Fw109-5] Sequence ID: A7HAB8.1 Length: 805 Range 1: 80 to 545 Score:243 bits(621), Expect:4e-67, Method:Compositional matrix adjust., Identities:153/475(32%), Positives:240/475(50%), Gaps:16/475(3%) Query 93 RGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDLKPHMELHAKLNKS 152 +G +L P AL + + + + +RA++ P L+ L+ L P L ++ ++ Sbjct 80 KGGVLEPLALRECAALARAAARTRGLLE---ARASETPRLWALAEPLSPSAALADRIERA 136 Query 153 VDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVL 212 ++ G I AS EL AR R R + Q++ +L D++ L+D + +R+ YVL Sbjct 137 IEPSGAISDRASAELAQARERSRGLHRALKAQVETLLADADMQRHLRDTYFTIRNERYVL 196 Query 213 PIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRILRELSKDC 272 P+ A + + GI SQSG T+F+EP ++ +L A EEQRILREL+ Sbjct 197 PVLASARRAVPGIVHNASQSGQTLFVEPDSMVELGNELSIANAVAAEEEQRILRELTGAL 256 Query 273 YLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRD------LNPRFSLINAKH 326 + IL D + A + PE L P D F L++ +H Sbjct 257 MADSGALARDLGILAALDVLEGSALLASDLDAHAPEVLSPFDGLRVGGAGAGFELLSLRH 316 Query 327 PLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFV 386 PL +L+ KK + + + L + ++SGPN GGKTVA+ VG+ ALM +AGL V Sbjct 317 PLLVLQGKKVVPSHVRL------DAPARALIVSGPNGGGKTVAITAVGLSALMLRAGLPV 370 Query 387 SC-DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGT 445 + + + + + + + +R + +DLSTF+ HLA +K + A SLIL+DE T Sbjct 371 AAAEGSRLPFFLEVKAAVDERGDLAKDLSTFTAHLAAVKEMLAGAVPGSLILVDEIAADT 430 Query 446 DPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKL 505 DP G A+A + LE + A V++TTH LK LA D R+ N + F+ +L PTY+L Sbjct 431 DPREGAALAAAILESLVERGAAVLVTTHLDELKALALTDPRYANARVGFDAERLAPTYQL 490 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIEINEE 560 G PG S AIE+A R+GL ++++AR + L+ L +R + EE Sbjct 491 HLGSPGSSSAIEVAARVGLPAPLVERARAALTGHGGALGQALRALDDERARLAEE 545 Range 2: 623 to 803 Score:67.4 bits(163), Expect:4e-10, Method:Compositional matrix adjust., Identities:53/195(27%), Positives:94/195(48%), Gaps:14/195(7%) Query 755 KSTKEKVRSAQQTAKEAQSQGRSPEFWKPGMSAKSTKLKEKGVVLKTADSKGNIECQFGI 814 ++T + A Q +A ++ +PG+ + L ++G V++ D K + + G Sbjct 623 RATVAQAAKATQARADAGAEALPGGEVRPGVRVRIVSLGQEGEVVEV-DGKDAL-VRAGP 680 Query 815 LKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNT 874 LK++ P +L+P L K ++ S + K + + S PP L+ Sbjct 681 LKVRRPVADLVP---LLGKAKDAAKLGRSRSEK-----LQAASEARPSA-PPGLE---RR 728 Query 875 IQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRG 934 + + G V+E L +++ LD+++ +I+HGHG G +K+++R HL S Y FR Sbjct 729 LDVRGLRVEELLREVERFLDRLYSDGEADCLILHGHGTGALKQALRDHLSASPYVGAFRA 788 Query 935 GRHGEGGDGVTIVEF 949 G EGGD VT+V Sbjct 789 GDRHEGGDAVTVVSL 803 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Alkaliphilus metalliredigens QYMF] Sequence ID: A6TNX0.1 Length: 789 Range 1: 1 to 599 Score:239 bits(611), Expect:8e-66, Method:Compositional matrix adjust., Identities:167/614(27%), Positives:309/614(50%), Gaps:24/614(3%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 + + ++ LE+ K+ L +K+ EL P + + TSE + + Sbjct 1 MNEKSIRVLEYGKMIDRLEERCLSAMAKEKARELRPIQSFGEITQLQSETSEAQSILIQR 60 Query 75 NGISLESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLF 133 I L D + + G+ L P+ L + TL+ +++SFFK E TK+P + Sbjct 61 GNIPLGGIHDIKQYLRKTEIGSYLDPKELLLVKDTLRTARNLKSFFK-EGDDQTKHPIVS 119 Query 134 NLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQD 193 L L+ + ++ + D I AS L + R ++ + +L+ I+ Sbjct 120 GLIQGLQSFRAIEDRIEICIVSDTEISDHASSTLKNIRRQISSKNDAVRNKLNGIINSST 179 Query 194 IRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKA 253 + LQD + +R YV+P++ + + + G+ S SG+T+F+EP A+ +L + Sbjct 180 TQKYLQDAIITMRQDRYVVPVKQEHRGNVPGLIHDQSSSGATLFVEPMAVVQLNNELREL 239 Query 254 QNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPR 313 + +E +RIL E+++ ++ ++ ILT D + A+ K + + G++P Sbjct 240 KIKEHIEIERILMEIAEMIAQYATEMRNNQIILTAIDFVFAKGKLSLEMKGVEPLL---- 295 Query 314 DLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 ++ + N +HPL L + + +L + Q V++GPN GGKTV +KT+ Sbjct 296 NVEGNVHIKNGRHPL--LNADEVVPTNLWIGETFQ------TLVITGPNTGGKTVTLKTL 347 Query 374 GIIALMAKAGLFVSCDKA-EIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANE 432 G++++MA++GL V D + ++ IF ++GD Q+ E+ LSTFS H+ I I E+ Sbjct 348 GLLSMMAQSGLHVPADYGTRLAIFDQIFADIGDEQSIEQSLSTFSSHMTNIVNIVEEVTS 407 Query 433 LSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSM 492 SL+L DE GTDP G A+ + L + T + TTH+S LK A + N S+ Sbjct 408 NSLVLFDELGAGTDPTEGAALGMAILNHLREMNVTTVATTHYSELKQYALTNEGVENASV 467 Query 493 EFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQL 552 EF+ L PTY+LL G+PG+S A E+++++GL + ++Q+A+ + ++ E+LL+ ++ Sbjct 468 EFDVATLSPTYRLLIGVPGKSNAFEISKKLGLPDGLVQRAKRFLSQDTIHFEDLLQNIEK 527 Query 553 KRIEINEELTKQNLLTQKLDSE--FKSLKNEKEQLSELRGDLV-----ENYRNKLQKRLN 605 R E E+ +Q +L++E + ++ K++L R ++ E YR + +++ Sbjct 528 NRRE--SEIERQEAKRIRLEAEKFAEGYEDRKQRLEAQRDQILRDAKKEAYRLVKEAKMD 585 Query 606 AFENRLEIRERQFE 619 + +RE +FE Sbjct 586 SEHIIKGLREMKFE 599 Range 2: 645 to 788 Score:57.8 bits(138), Expect:4e-07, Method:Compositional matrix adjust., Identities:46/170(27%), Positives:80/170(47%), Gaps:30/170(17%) Query 784 GMSAKSTKLKEKGVVLKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSS 843 G + + L + G VL D KG ++ Q GI+K+ + L SP+K Sbjct 645 GDAVRILSLNQVGHVLNEVDPKGEVQVQAGIMKVNMHISNL----------ERVSPEK-- 692 Query 844 LNVKPLTKNFKKYHNLQDSEIPPTLQH-GGNT---IQLLGCTVDESLDKLDIELDKMHRM 899 ++Q S ++ G+T + + G ++E++ ++D LD + + Sbjct 693 --------------DIQQSGTGKIMKSKTGDTKSEVDVRGKNLEEAMLEIDKYLDDSYIV 738 Query 900 DVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 + +V IIHG G G +K +++ L+ + + R G +GEGG GVTIVE Sbjct 739 GLTQVTIIHGVGTGVLKAGIKQMLKKNKHVRTHREGVYGEGGMGVTIVEL 788 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Listeria monocytogenes HCC23] Sequence ID: B8DI00.1 Length: 785 Range 1: 9 to 575 Score:238 bits(608), Expect:2e-65, Method:Compositional matrix adjust., Identities:186/583(32%), Positives:300/583(51%), Gaps:22/583(3%) Query 23 LEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSE-----MLDLNTETNGI 77 LE++KI + L FA+ ++ EL P + + T E L + G+ Sbjct 9 LEFDKIKKQLTEFASSSLGEQAILELAPATDFQVVQKTQLETEEGAKIIRLRGSAPITGL 68 Query 78 SLESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSN 137 + D L+ G L+ +YQI L++ +++F + P L LS+ Sbjct 69 T----DVFAHLKRLEIGGDLNGLEIYQIGSNLRVSRQMKNFMNDLLEIGVEIPLLGALSD 124 Query 138 DLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNA 197 +L E+ + SVD G +L +AS L + R L + ++ E+L+ L+ ++ Sbjct 125 ELLVLKEVEEDIAISVDESGKVLDTASEALSTIRRTLRRTEDRVREKLESYLRDRNASKM 184 Query 198 LQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDV 257 L D V +R+ YV+P++ + K GI S SG T+FIEPQ++ + + Q Sbjct 185 LSDAVITIRNDRYVIPVKQEYKGHYGGIVHDQSASGQTLFIEPQSVVDLNNERKALQAKE 244 Query 258 EVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNP 317 + E +RIL E+S +I ++ IL +FD I A+ +F + + P ++ Sbjct 245 KQEIERILAEISASLAAWINEIHHNTFILGRFDFIFAKARFGKAMKAVTPHLSDAGVVH- 303 Query 318 RFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIA 377 LI A+HPL L+ K +AND++L GE + V++GPN GGKT+ +KT+G++ Sbjct 304 ---LIAARHPL--LDAAKVVANDIYL-----GEDFTTI-VITGPNTGGKTITLKTLGLLT 352 Query 378 LMAKAGLFVSC-DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLI 436 LMA++GL + + + I +E++F ++GD Q+ E+ LSTFS H+ I I E N+ SLI Sbjct 353 LMAQSGLQIPAQEDSTIAVFEHVFADIGDEQSIEQSLSTFSSHMTNIVSILENVNQKSLI 412 Query 437 LLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEP 496 L DE GTDP G A+A + L+ K A+V+ TTH+ LK N N S+EF Sbjct 413 LYDELGAGTDPQEGAALAIAILDASHAKGASVVATTHYPELKAYGYNRVHATNASVEFNV 472 Query 497 HKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIE 556 L PTYKLL G+PG+S A +++ R+GL+ NII +AR+ +ES + +++ L+ KR Sbjct 473 ETLSPTYKLLIGVPGRSNAFDISRRLGLSENIITEARSLVDTESADLNDMISSLEEKRNL 532 Query 557 INEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNK 599 E + L + DS K L+ E + + L+E K Sbjct 533 AETEYEEARELARGADSLLKDLQKEISNYYQQKDKLIEQASEK 575 Range 2: 631 to 784 Score:60.5 bits(145), Expect:5e-08, Method:Compositional matrix adjust., Identities:52/187(28%), Positives:83/187(44%), Gaps:42/187(22%) Query 772 QSQGRSPEFWKPGMSAKSTKLKEKGVVL-KTADSKGNIECQFGILKIKIPYHELIPGNET 830 Q+ + P ++ G + + L +KG +L K +D + N+ Q GI+K+KI +L Sbjct 631 QAPKQKPHVFQEGDNVRVLSLGQKGTLLNKISDKEWNV--QIGIIKMKIKTADLEYIQPE 688 Query 831 LPKQ--------NSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTV 882 PK+ +S SP KS L+++ G Sbjct 689 KPKKQRIITSVHSSGSPAKSELDLR-------------------------------GERY 717 Query 883 DESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGD 942 +++L K+D LD+ +V IIHG G G ++ V +L++ R G EGG+ Sbjct 718 EDALQKVDKYLDEALLAGYPQVAIIHGKGTGALRTGVTEYLKNHRMVKSIRFGAAAEGGN 777 Query 943 GVTIVEF 949 GVTIVEF Sbjct 778 GVTIVEF 784 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Lactobacillus gasseri ATCC 33323 = JCM 1131] Sequence ID: Q045P1.1 Length: 791 Range 1: 9 to 546 Score:238 bits(606), Expect:4e-65, Method:Compositional matrix adjust., Identities:165/555(30%), Positives:289/555(52%), Gaps:25/555(4%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISL 79 + +LE+N+I + L+ A +K +L P + ++ T + ++ + + Sbjct 9 IEKLEYNRIIRQLSDLAITAPAKAQALKLMPSSDFDEVKKSIDQTRVLSNILRVKGPMPI 68 Query 80 ESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSND 138 F D L+ A L+ + L I + L L + F + R + + Sbjct 69 TDFKDVRPSLKRLKVKANLNGEELGNIFLVLSLAKDVGQFASDLEEREIDTRPIEKYLKN 128 Query 139 LKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNAL 198 L +L KLN++++ DG + +AS +L R ++ + I +++ + + + L Sbjct 129 LAVPEDLFKKLNQAIEYDGTVKDTASSKLMQLRHDIQSNETDIKNHMNDYISGKHTQ-YL 187 Query 199 QDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAM----QQAQLEKAQ 254 +++ +RDG YVLP++ + K+ G+ S SG T+F+EPQA+ + QQ L + + Sbjct 188 SENIVTIRDGRYVLPVKQEYKNKFGGVVHDQSASGQTLFVEPQAVLVLNNRQQNLLAQER 247 Query 255 NDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRD 314 ++ RIL ELS+ ++I +++ LTQ D + A++K A + +P + Sbjct 248 QEI----HRILIELSELAGAYQKEINNNALALTQLDFLSAKSKLAKKMKATEPVLNQDHI 303 Query 315 LNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVG 374 + R A+HPL ++ KK + N++ L T+ +++GPN GGKT+ +KT+G Sbjct 304 IKLR----KARHPL--IDPKKVVPNNIELG------TTFDTMLITGPNTGGKTITLKTLG 351 Query 375 IIALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANEL 433 ++ LMA+AGLF++ ++ +++ + I+ ++GD Q+ E+ LSTFS H+ QI +I E Sbjct 352 LLQLMAQAGLFITAEEGSQLTVFNEIYADIGDEQSIEQSLSTFSSHMDQIIKIMNNVTED 411 Query 434 SLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSME 493 L+L+DE GTDP G ++A + L+ +A + ITTH+ LK N R N SME Sbjct 412 DLVLIDELGAGTDPEEGASLAIAILDDLRQTQAKIAITTHYPELKLYGYNRKRTTNASME 471 Query 494 FEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKEL--Q 551 F+ KL PTY+L GIPGQS A +A ++G+N ++ KAR E + +++ L Q Sbjct 472 FDLKKLAPTYRLRIGIPGQSNAFAIAHQLGMNEAVVDKARDLMNDEDSDINKMIERLTEQ 531 Query 552 LKRIEINEELTKQNL 566 K E E KQN+ Sbjct 532 TKAAEQLHETLKQNV 546 Range 2: 716 to 790 Score:42.0 bits(97), Expect:0.026, Method:Compositional matrix adjust., Identities:24/75(32%), Positives:38/75(50%), Gaps:0/75(0%) Query 875 IQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRG 934 + L G +E+L LD LD ++ V IIHG G G I+ V+++L+ + + + Sbjct 716 LDLRGQRYEEALTNLDRYLDASLLAGLNTVTIIHGIGTGAIRNGVQQYLKRNRHVKSYNY 775 Query 935 GRHGEGGDGVTIVEF 949 +GG G TIV Sbjct 776 APANQGGTGATIVNL 790 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Exiguobacterium artemiae 255-15] Sequence ID: B1YJY5.1 Length: 788 Range 1: 4 to 527 Score:238 bits(606), Expect:4e-65, Method:Compositional matrix adjust., Identities:157/545(29%), Positives:288/545(52%), Gaps:32/545(5%) Query 18 DALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGI 77 +AL LE++K+ + LA + ++EP ED F +L L TE + Sbjct 4 NALRVLEYDKLKELLAKQTASSLGAQFVRKMEPA---ED----FEQVKALLALTTEATTV 56 Query 78 SL--ESFDF---TLFQNFLQR---GALLSPQALYQILITLKLCHSIQSFFK--YEKSRAT 127 + + F T ++ ++R G++LS L + + +++F + +E Sbjct 57 YRLRDRYPFGGLTDVRSEVKRAEIGSVLSTSELLAVADVVYSGRQVKAFQERLHEDHPDL 116 Query 128 KYPNLFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDE 187 + P L + + +E+ + ++D G + SAS +L + RS+L + ++ ++D Sbjct 117 RLPALDSRIEQITKLVEIEQGIRHAIDDQGTVQDSASDKLRALRSQLRSLEGQVRSKIDG 176 Query 188 ILKKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQ 247 +L+ + L D + +R+ Y +P++ + + GI S SG+T+FIEPQA+ Sbjct 177 VLRNKS--KMLSDAIVTMRNDRYCVPVKQEYRQAFGGIVHDQSASGATLFIEPQAVVAAN 234 Query 248 AQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKP 307 ++++A+ E +RIL +LS V + + + ++L + D I+A+ + I ++P Sbjct 235 NEIQEARLKERAEIERILAQLSALVGSVGDSLRINVDVLAELDFIMAKALYGHTIRAVEP 294 Query 308 EFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKT 367 + N L A+HP + + + + + L GE + V++GPN GGKT Sbjct 295 RL----NENRHIVLKEARHPF--IPDDEVVPITVSLG----GEFTS--LVITGPNTGGKT 342 Query 368 VAMKTVGIIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRI 426 V +KT+G++ LM ++GL+V + D+ E+ ++ I+ ++GD Q+ E++LSTFS H+ I + Sbjct 343 VTLKTIGLLQLMVQSGLYVPAADETELSVFDAIYADIGDEQSIEQNLSTFSSHMTNIVSM 402 Query 427 SEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSR 486 + + +SL+L DE GTDP G A+A + L+ + A V TTH+S LK N Sbjct 403 MGKIDFMSLVLFDELGAGTDPTEGAALAIAILDEVKRRGARVAATTHYSELKAYGYNREG 462 Query 487 FFNGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENL 546 N SMEF+ L PTY+LL G+PG+S A E+++R+GL + +I AR G++++ +E + Sbjct 463 VVNASMEFDVESLSPTYRLLIGVPGRSNAFEISKRLGLEDRVIDAARDQVGTDAQSVETM 522 Query 547 LKELQ 551 + L+ Sbjct 523 IGRLE 527 Range 2: 625 to 787 Score:45.8 bits(107), Expect:0.002, Method:Compositional matrix adjust., Identities:52/185(28%), Positives:81/185(43%), Gaps:22/185(11%) Query 765 QQTAKEAQSQGRSPEFWKPGMSAKSTKLKEKGVVLKTADSKGNIECQFGILKIKIPYHEL 824 Q+ AK ++P F K G K T +KG ++ +S G Q GI+K+ + +L Sbjct 625 QRIAKVKAKTNQAPVFAK-GEEVKVTTFNQKGYIINQ-NSNGEYTVQVGIMKVNVKPSDL 682 Query 825 IPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDE 884 E S+S K +TK L L G V+E Sbjct 683 AKVGEV----KSASKTKKRSGGTSITKQSAASAELD----------------LRGVRVEE 722 Query 885 SLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGV 944 L KLD +D+ + +++ +IHG G G +++ V+ +L + + R G GEGG GV Sbjct 723 GLAKLDRFMDQALLSNYEQIRVIHGLGTGAMRQGVQEYLRGNRHVKTHRLGGQGEGGHGV 782 Query 945 TIVEF 949 TI+E Sbjct 783 TIIEL 787 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Clostridium botulinum A str. ATCC 19397] Sequence ID: A7FY72.1 Length: 788 Range 1: 1 to 533 Score:237 bits(604), Expect:6e-65, Method:Compositional matrix adjust., Identities:158/548(29%), Positives:279/548(50%), Gaps:17/548(3%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 ++ ++ LE+NKI + L + +K +L+P+ + + T E L Sbjct 1 MKDKSIKVLEFNKIQEILKNYTCTKAAKDIIEDLKPYDSMYEVREHLEETKEAFKLLITK 60 Query 75 NGISLES-FDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLF 133 E +D + ++G+ L P L +I L+ + + + K Y L Sbjct 61 GAPPFEGVYDIRSGISLAEKGSALLPGQLLKIAAVLRCARRFKEYINH-KEEEESYRVLE 119 Query 134 NLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQD 193 N+ + ++ ++ +++ + I AS L++ R L+ + ++++ +++ Sbjct 120 NICEGIFSLPKIEEEIFNAIEGEDEIADRASSTLYNIRRSLKEKNYSVRDKINSLVRSYS 179 Query 194 IRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKA 253 + LQ++++ +R YVLP++A+ K + G+ S +G+T+FIEP +L ++++ Sbjct 180 --SYLQENIYTVRGDRYVLPVKAEHKGAVPGLVHDQSSTGATLFIEPMSLVNLNNEIKEL 237 Query 254 QNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPR 313 + E +RIL LS + + + I+ + D I A+ KFA + P Sbjct 238 MLKEKAEIERILTVLSAKINANITGVKTDANIVWELDFIFAKAKFASEYNCTCPTI---- 293 Query 314 DLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 + +I +HPL ++ ++ + + L + +++GPN GGKTV +KTV Sbjct 294 NDEGIVDIIEGRHPL--IDRREVVPISVKLGEEFTS------LMITGPNTGGKTVTLKTV 345 Query 374 GIIALMAKAGLFVSC-DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANE 432 G+I LMA +GL + + + I + N+F ++GD Q+ E+ LSTFS H+ I I ++A+E Sbjct 346 GLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDKADE 405 Query 433 LSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSM 492 SL+L DE GTDP G A+A S LE + +I TTH+S LK A N S+ Sbjct 406 NSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYALRKEGVENASV 465 Query 493 EFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQL 552 EF+ L PTY+LL GIPG+S A E+++R+GL + II AR +E+ R E L++ LQ Sbjct 466 EFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENISNENIRFEELIQNLQE 525 Query 553 KRIEINEE 560 K I+ E+ Sbjct 526 KSIKAQED 533 Range 2: 607 to 787 Score:63.5 bits(153), Expect:6e-09, Method:Compositional matrix adjust., Identities:51/200(26%), Positives:94/200(47%), Gaps:19/200(9%) Query 750 LQEIEKSTKEKVRSAQQTAKEAQSQGRSPEFWKPGMSAKSTKLKEKGVVLKTADSKGNIE 809 L+E K K+K+ S ++ + +G + + K G + +K +VL D+KG++ Sbjct 607 LEEERKKLKDKLDSIEEKEIKTVHKGEALKNVKEGDEVLLASINQKVIVLSKPDNKGDVL 666 Query 810 CQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQ 869 Q GI+KI +L NS++ K L N ++ + Sbjct 667 VQAGIMKITANIKDL----RAAKGSNSNNSSSKIKKSKKLNLNLRRVES----------- 711 Query 870 HGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYK 929 ++ L G +E++ +D LD+ + + V I+HG G G +++++ L+ S+ Sbjct 712 ----SVDLRGMDAEEAIYTVDKYLDEAYLGGLGEVTIVHGKGTGVLRKTIMDMLKGHSHV 767 Query 930 LRFRGGRHGEGGDGVTIVEF 949 ++R G +GEGG GVT+VE Sbjct 768 KKYRLGEYGEGGTGVTVVEL 787 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Listeria innocua Clip11262] Sequence ID: Q92CH6.1 Length: 785 Range 1: 9 to 575 Score:237 bits(604), Expect:6e-65, Method:Compositional matrix adjust., Identities:185/583(32%), Positives:304/583(52%), Gaps:22/583(3%) Query 23 LEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDL-----NTETNGI 77 LE++KI + LA FA+ ++ EL P + + T E + + G+ Sbjct 9 LEFDKIKKQLAEFASSSLGEQAIYELAPATDFQVVQKAQLETEEGAKIIRLRGSAPITGL 68 Query 78 SLESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSN 137 + D L+ G L+ +YQI L++ +++F + P L LS+ Sbjct 69 T----DVFAHLKRLEIGGDLNGLEIYQIGSNLRVSRQMKNFMNDLLEIGVEIPLLGALSD 124 Query 138 DLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNA 197 +L ++ + S+D G IL +AS L S R L + ++ E+L+ L+ ++ Sbjct 125 ELLVLKDVEEDIAISIDESGKILDTASEALSSIRRTLRRTEDRVREKLESYLRDRNASKM 184 Query 198 LQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDV 257 L D V +R+ YV+P++ + K GI S SG T+FIEPQ++ + + Q Sbjct 185 LSDAVITIRNDRYVIPVKQEYKGHYGGIVHDQSASGQTLFIEPQSVVDLNNERKALQAKE 244 Query 258 EVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNP 317 + E +RIL E+S +I ++ IL +FD I+A+ +F + + P ++ Sbjct 245 KQEIERILAEISASLAGWINEIHHNTFILGRFDFILAKARFGKALKAVTPHLSDTGIVH- 303 Query 318 RFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIA 377 LI A+HPL L+ +K +AND++L GE + V++GPN GGKT+ +KT+G++ Sbjct 304 ---LIAARHPL--LDAEKVVANDIYL-----GEDFSTI-VITGPNTGGKTITLKTLGLLT 352 Query 378 LMAKAGLFVSC-DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLI 436 LMA++GL + + + I +EN+F ++GD Q+ E+ LSTFS H+ I I E+ N SLI Sbjct 353 LMAQSGLQIPAQEDSTIAVFENVFADIGDEQSIEQSLSTFSSHMTNIVSILEKVNHKSLI 412 Query 437 LLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEP 496 L DE GTDP G A+A + L+ K A+V+ TTH+ LK N + N S+EF Sbjct 413 LYDELGAGTDPQEGAALAIAILDASHKKGASVVATTHYPELKAYGYNRAHATNASVEFNV 472 Query 497 HKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIE 556 L PTYKLL G+PG+S A +++ R+GL+ +II +AR+ +ES + +++ L+ KR Sbjct 473 ETLSPTYKLLIGVPGRSNAFDISRRLGLSESIITEARSLVDTESADLNDMISSLEEKRNL 532 Query 557 INEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNK 599 E + L + D+ K L+ E + + L+E K Sbjct 533 AEREYEEARELARGADALLKDLQKEITNYYQQKDKLLEQANEK 575 Range 2: 637 to 784 Score:58.5 bits(140), Expect:2e-07, Method:Compositional matrix adjust., Identities:50/181(28%), Positives:80/181(44%), Gaps:42/181(23%) Query 778 PEFWKPGMSAKSTKLKEKGVVL-KTADSKGNIECQFGILKIKIPYHELIPGNETLPKQ-- 834 P ++ G + + L +KG +L K +D + N+ Q GI+K+KI +L PK+ Sbjct 637 PHVFQAGDNVRVLSLGQKGTLLNKISDKEWNV--QIGIIKMKIKTTDLEYIEPEKPKKQR 694 Query 835 ------NSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDK 888 +S SP KS L+++ G ++++ K Sbjct 695 IITSVHSSDSPAKSELDLR-------------------------------GERYEDAIQK 723 Query 889 LDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVE 948 +D LD+ +V IIHG G G ++ V +L++ R G EGG+GVTIVE Sbjct 724 VDKYLDEALLAGYPQVAIIHGKGTGALRTGVTEYLKNHRMVKSIRFGAAAEGGNGVTIVE 783 Query 949 F 949 F Sbjct 784 F 784 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Clostridium botulinum A2 str. Kyoto] Sequence ID: C1FKL4.1 Length: 788 Range 1: 1 to 533 Score:236 bits(603), Expect:8e-65, Method:Compositional matrix adjust., Identities:158/548(29%), Positives:279/548(50%), Gaps:17/548(3%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 ++ ++ LE+NKI + L + +K +L+P+ + + T E L Sbjct 1 MKDKSIKVLEFNKIQEILKNYTCTKAAKDIIEDLKPYDSMYEVREHLEETKEAFKLLITK 60 Query 75 NGISLES-FDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLF 133 E +D + ++G+ L P L +I L+ + + + K Y L Sbjct 61 GAPPFEGVYDIRSGISLAEKGSALLPGQLLKIAAVLRCARRFKEYINH-KEEEESYRVLE 119 Query 134 NLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQD 193 N+ + ++ ++ +++ + I AS L++ R L+ + ++++ +++ Sbjct 120 NICEGIFSLPKIEEEIFNAIEGEDEIADRASSTLYNIRRSLKEKNYSVRDKINSLVRSYS 179 Query 194 IRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKA 253 + LQ++++ +R YVLP++A+ K + G+ S +G+T+FIEP +L ++++ Sbjct 180 --SYLQENIYTVRGDRYVLPVKAEHKGAVPGLVHDQSSTGATLFIEPMSLVNLNNEIKEL 237 Query 254 QNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPR 313 + E +RIL LS + + + I+ + D I A+ KFA + P Sbjct 238 MLKEKAEIERILTVLSAKINANITGVKTDANIVWELDFIFAKAKFASEYNCTCPTI---- 293 Query 314 DLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 + +I +HPL ++ ++ + + L + +++GPN GGKTV +KTV Sbjct 294 NDEGIVDIIEGRHPL--IDRREVVPISVKLGEEFTS------LMITGPNTGGKTVTLKTV 345 Query 374 GIIALMAKAGLFVSC-DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANE 432 G+I LMA +GL + + + I + N+F ++GD Q+ E+ LSTFS H+ I I ++A+E Sbjct 346 GLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDKADE 405 Query 433 LSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSM 492 SL+L DE GTDP G A+A S LE + +I TTH+S LK A N S+ Sbjct 406 NSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYALRKEGVENASV 465 Query 493 EFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQL 552 EF+ L PTY+LL GIPG+S A E+++R+GL + II AR +E+ R E L++ LQ Sbjct 466 EFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENISNENIRFEELIENLQE 525 Query 553 KRIEINEE 560 K I+ E+ Sbjct 526 KSIKAEED 533 Range 2: 607 to 787 Score:63.9 bits(154), Expect:5e-09, Method:Compositional matrix adjust., Identities:51/200(26%), Positives:94/200(47%), Gaps:19/200(9%) Query 750 LQEIEKSTKEKVRSAQQTAKEAQSQGRSPEFWKPGMSAKSTKLKEKGVVLKTADSKGNIE 809 L+E K K+K+ S ++ + +G + + K G + +K +VL D+KG++ Sbjct 607 LEEERKKLKDKLDSIEEKEIKTVHEGEALKNVKEGDEVLLASINQKVIVLSKPDNKGDVL 666 Query 810 CQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQ 869 Q GI+KI +L NS++ K L N ++ + Sbjct 667 VQAGIMKITANIKDL----RAAKGSNSNNSSSKIKKSKKLNLNLRRVES----------- 711 Query 870 HGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYK 929 ++ L G +E++ +D LD+ + + V I+HG G G +++++ L+ S+ Sbjct 712 ----SVDLRGMDAEEAIYTVDKYLDEAYLGGLGEVTIVHGKGTGVLRKTIMDMLKGHSHV 767 Query 930 LRFRGGRHGEGGDGVTIVEF 949 ++R G +GEGG GVT+VE Sbjct 768 KKYRLGEYGEGGTGVTVVEL 787 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Acetivibrio thermocellus ATCC 27405] Sequence ID: A3DE67.1 Length: 793 Range 1: 1 to 655 Score:236 bits(603), Expect:8e-65, Method:Compositional matrix adjust., Identities:191/676(28%), Positives:341/676(50%), Gaps:41/676(6%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 + + L LE+NKI L AT K+ +L P +L TS+ + Sbjct 1 MNEKTLKILEFNKIIDKLVSLATSSLGKELAEKLVPDTDLNRVERAQKETSDAVAFIARR 60 Query 75 NGISLESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLF 133 + D ++ GA+L+P L + L+ +++S+ ++ + + + Sbjct 61 GTPPMGGIHDIRDSLKRVEIGAILNPGELLKTADVLRAVRNLKSYASNDRIKTDEDNIVS 120 Query 134 NLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQD 193 L L+ + + ++ S+ + I +ASP L + R ++ +A+ I ++L++I++ Sbjct 121 ELIGCLESNKRIEDRIYMSILSEDEIADNASPTLANIRRQIRNAQESIKDKLNDIIRSSR 180 Query 194 IRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKA 253 + +Q+ + LR YV+P++ + ++ I G+ S SG+T+FIEP A+ + + Sbjct 181 YQKYIQEPIVTLRGDRYVIPVKQEYRTEIPGLIHDSSASGATIFIEPMAVVEANNHIREL 240 Query 254 QNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPR 313 + + E ++IL EL+ + + + + S+ IL + D I A+ + + + + P Sbjct 241 KIKEQAEIEKILGELTGEIRGIVDSLKSNVSILGRLDFIFAKARLSLDYNCVCPV----- 295 Query 314 DLNPRFSLI--NAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMK 371 LN ++ +HPL L+ K + D + V++GPN GGKTV +K Sbjct 296 -LNDEHKILIKKGRHPL--LDKKTVVPIDFWIGEDFN------TLVVTGPNTGGKTVTLK 346 Query 372 TVGIIALMAKAGLFVSCDKA-EIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQA 430 TVG+ LM +AGL + ++ ++ ++ ++ ++GD Q+ E+ LSTFS H+ I I + Sbjct 347 TVGLFTLMTQAGLHIPANEGTKMSIFKKVYADIGDEQSIEQSLSTFSSHMKNIVGILKDV 406 Query 431 NELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNG 490 +E SL+L DE GTDP G A+A S LEY K +T + TTH+S LK A N Sbjct 407 DEDSLVLFDELGAGTDPTEGAALAMSILEYLRNKGSTTVATTHYSQLKAYAVTTKFVENA 466 Query 491 SMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKEL 550 EF L PTY+LL G+PG+S A +++R+GL ++II+KA+ + + + E++L + Sbjct 467 CCEFNVETLRPTYRLLIGVPGKSNAFAISKRLGLFDDIIEKAKEFLTQDDIKFEDMLMSI 526 Query 551 Q--LKRIEINEELTKQN--LLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNA 606 + L + E NE++ ++ L +KL E L+ +K +L+E R L++ R + +K L Sbjct 527 EKNLNQSE-NEKMKAESYRLEAEKLKKE---LEEQKRKLAENRERLIQEARAEARKIL-- 580 Query 607 FENRLEIRE-----RQFEKQKETLLR--EIHEISHK-----ETIENNLEISQAQQNNLSE 654 E R E E R+ E++ R E E+ K ++IE LE+ A +N L + Sbjct 581 LEARKEAEEIISKMRRLEQEVHNAQRQKEAEELRLKLKRKVDSIEETLELPLAPKNALVK 640 Query 655 KNQNKLAPAQKKEIIN 670 +N L P I+N Sbjct 641 PPEN-LKPGDSVLIVN 655 Range 2: 559 to 792 Score:75.9 bits(185), Expect:1e-12, Method:Compositional matrix adjust., Identities:69/256(27%), Positives:113/256(44%), Gaps:29/256(11%) Query 701 QSLDEKAERFRAPKNMSSRSLLDEARMSLQSLKNSFDDIEEQLHDDL--DTLQEIEKSTK 758 + L E ER +R +L EAR + + + +E+++H+ +E+ K Sbjct 559 RKLAENRERLIQEARAEARKILLEARKEAEEIISKMRRLEQEVHNAQRQKEAEELRLKLK 618 Query 759 EKVRSAQQTAK----EAQSQGRSPEFWKPGMSAKSTKLKEKGVVLKTADSKGNIECQFGI 814 KV S ++T + + + PE KPG S L +KG V+ D G + Q GI Sbjct 619 RKVDSIEETLELPLAPKNALVKPPENLKPGDSVLIVNLDQKGTVITPPDKDGEVVVQAGI 678 Query 815 LKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTK-NFKKYHNLQDSEIPPTLQHGGN 873 +KI + L +E QK LN + K K ++ Sbjct 679 MKINVHISNLKLVDE----------QKIVLNNSGIGKIGMSKAKSIS------------T 716 Query 874 TIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFR 933 I + G ++E+++ +D LD + + V IIHG G G ++ +++ L+ S FR Sbjct 717 EIDVRGYNLEEAIESVDKYLDDAYLSGLTEVSIIHGKGTGVLRSGIQKFLKSDSRVKSFR 776 Query 934 GGRHGEGGDGVTIVEF 949 G++GEG GVTIVE Sbjct 777 LGKYGEGESGVTIVEL 792 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Listeria monocytogenes EGD-e] Sequence ID: Q8Y7P1.1 Length: 785 Range 1: 9 to 575 Score:236 bits(603), Expect:9e-65, Method:Compositional matrix adjust., Identities:185/583(32%), Positives:301/583(51%), Gaps:22/583(3%) Query 23 LEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSE-----MLDLNTETNGI 77 LE++KI + L FA+ ++ EL P + + T E L + G+ Sbjct 9 LEFDKIKKQLTEFASSSLGEQAILELAPATDFQVVQKTQLETEEGAKIIRLRGSAPITGL 68 Query 78 SLESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSN 137 + D L+ G L+ +YQI L++ +++F + P L LS+ Sbjct 69 T----DVFAHLKRLEIGGDLNGLEIYQIGSNLRVSRQMKNFMNDLLEIGVELPILGALSD 124 Query 138 DLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNA 197 +L E+ + SVD G +L +AS L + R L + ++ E+L+ L+ ++ Sbjct 125 ELLVLKEVEEDIAISVDESGKVLDTASEALSTIRRTLRRTEDRVREKLESYLRDRNASKM 184 Query 198 LQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDV 257 L D V +R+ YV+P++ + K GI S SG T+FIEPQ++ + + Q Sbjct 185 LSDAVITIRNDRYVIPVKQEYKGHYGGIVHDQSASGQTLFIEPQSVVDLNNERKALQAKE 244 Query 258 EVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNP 317 + E +RIL E+S +I ++ IL +FD I A+ +F + + P ++ Sbjct 245 KQEIERILAEISASLAAWINEIHHNTFILGRFDFIFAKARFGKAMKAVTPHLSDAGVVH- 303 Query 318 RFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIA 377 LI A+HPL L+ K +AND++L GE + V++GPN GGKT+ +KT+G++ Sbjct 304 ---LIAARHPL--LDAAKVVANDIYL-----GEDFTTI-VITGPNTGGKTITLKTLGLLT 352 Query 378 LMAKAGLFVSC-DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLI 436 LMA++GL + + + I +E++F ++GD Q+ E+ LSTFS H+ I I E+ N+ SLI Sbjct 353 LMAQSGLQIPAQEDSTIAVFEHVFADIGDEQSIEQSLSTFSSHMTNIVSILEKVNQKSLI 412 Query 437 LLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEP 496 L DE GTDP G A+A + L+ K A+V+ TTH+ LK N N S+EF Sbjct 413 LYDELGAGTDPQEGAALAIAILDASHEKGASVVATTHYPELKAYGYNRVHATNASVEFNV 472 Query 497 HKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIE 556 L PTYKLL G+PG+S A +++ R+GL+ NII +AR+ +ES + +++ L+ KR Sbjct 473 ETLSPTYKLLIGVPGRSNAFDISRRLGLSENIITEARSLVDTESADLNDMISSLEEKRNL 532 Query 557 INEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNK 599 E + L + D+ K L+ E + + L+E K Sbjct 533 AETEYEEARELARGADNLLKDLQKEITNYYQQKDKLIEQASEK 575 Range 2: 631 to 784 Score:60.5 bits(145), Expect:5e-08, Method:Compositional matrix adjust., Identities:52/187(28%), Positives:83/187(44%), Gaps:42/187(22%) Query 772 QSQGRSPEFWKPGMSAKSTKLKEKGVVL-KTADSKGNIECQFGILKIKIPYHELIPGNET 830 Q+ + P ++ G + + L +KG +L K +D + N+ Q GI+K+KI +L Sbjct 631 QAPKQKPHVFQEGDNVRVLSLGQKGTLLNKISDKEWNV--QIGIIKMKIKTADLEYIQPE 688 Query 831 LPKQ--------NSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTV 882 PK+ +S SP KS L+++ G Sbjct 689 KPKKQRIITSVHSSGSPAKSELDLR-------------------------------GERY 717 Query 883 DESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGD 942 +++L K+D LD+ +V IIHG G G ++ V +L++ R G EGG+ Sbjct 718 EDALQKVDKYLDEALLAGYPQVAIIHGKGTGALRTGVTEYLKNHRMVKSIRFGAAAEGGN 777 Query 943 GVTIVEF 949 GVTIVEF Sbjct 778 GVTIVEF 784 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Clostridium tetani E88] Sequence ID: Q891U1.1 Length: 786 Range 1: 1 to 616 Score:236 bits(602), Expect:1e-64, Method:Compositional matrix adjust., Identities:189/641(29%), Positives:324/641(50%), Gaps:29/641(4%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 + + AL LE+ KI + L GF +K L+P+ L + T E LDL Sbjct 1 MNERALKVLEFYKIKEKLKGFVKTNAAKDIVDNLKPYTNLYEVEMHLEETMEALDLLQTK 60 Query 75 NGISLES-FDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLF 133 E +D +++ +L P L ++ LK + + K T + N+ Sbjct 61 GEPPFEGVYDIRDILIRVEKAMVLLPGQLLKVASILKSSRRFKDYVG-RKHEETPHKNIE 119 Query 134 NLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQD 193 ++ ++ L + V D I AS +L+ R L + ++++ +++K Sbjct 120 DICEGIELLKGLEESIFNIVISDDEIADRASLKLYGIRRSLRDKNDSLRDRVNSLVRKYS 179 Query 194 IRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKA 253 LQ+ ++ +R YVLP+RA+ K + G+ S SG+T+FIEP +L ++++ Sbjct 180 --PYLQESIYTIRGDRYVLPVRAEHKGSVPGLVHDQSSSGATLFIEPMSLVNLNNEIKEL 237 Query 254 QNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPR 313 E +RIL ELS Y + + +++++ + D I A+ KFA + P+ + Sbjct 238 LLKEREEIERILEELSLKVYNNLDVVNVNAKVIWELDFIFAKAKFASHNNCTLPKVSE-- 295 Query 314 DLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 + +I KHPL ++ +K + D++L +++GPN GGKTV +KT+ Sbjct 296 --DGIVDIIEGKHPL--IDTEKVVPTDIYLGKDFTS------LIITGPNTGGKTVTLKTL 345 Query 374 GIIALMAKAGLFVSC-DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANE 432 G+I +M +GL + + + I +E IF ++GD Q+ E+ LSTFS H+ I I +A+ Sbjct 346 GLIHIMGLSGLLIPAKENSTIAFFEEIFADIGDEQSIEQSLSTFSSHMVNIVDIISKADH 405 Query 433 LSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSM 492 SL+L DE GTDP G A+A S LE +K ++ TTH+S LK A N S+ Sbjct 406 KSLVLFDELGAGTDPTEGAALAISILENLRRRKCKIVATTHYSELKGYALKTEDVENASV 465 Query 493 EFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQL 552 EF+ L PTY+LL GIPG+S A E+++R+GL +II++A+ S+S + E L+++LQ Sbjct 466 EFDVETLRPTYRLLIGIPGKSNAFEISKRLGLGEDIIEEAKNNIESDSLKFEALIEKLQS 525 Query 553 KRIEINEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNAFENRLE 612 K I+ +++ + + + D LK++ E + +VE R KL K +L Sbjct 526 KSIKASDDARRAEMYKLEAD----RLKDKYED----KLKIVEETREKLLKGAQEEAKKL- 576 Query 613 IRERQFEKQKETL--LREIHEISHKETIENNLEISQAQQNN 651 I+E + E+ E L +RE+ ++ + T LE + + N+ Sbjct 577 IKEAK-EEADEILKNIRELEKMGYSSTARQKLEEERKKLNS 616 Range 2: 649 to 785 Score:57.8 bits(138), Expect:4e-07, Method:Compositional matrix adjust., Identities:46/163(28%), Positives:80/163(49%), Gaps:30/163(18%) Query 791 KLKEKGVVLKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLT 850 KL +K ++L D++G ++ Q GI+KI + +L ++ PK+ + +K ++ T Sbjct 649 KLDQKVIILSKPDNRGEVQVQAGIMKINVKLDDLRLVDK--PKEENKKGRKREAKLRMRT 706 Query 851 KNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGH 910 +SEI L G E++ D LD+ + + V +IHG Sbjct 707 ---------VESEI-----------DLRGMDSMEAVYNTDKYLDEAYVAGLKEVTVIHGK 746 Query 911 GMGKIKESV----RRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 G G +++S+ +RH + +Y+L G +GEGG GVT+VE Sbjct 747 GTGILRKSINDMLKRHPQVKNYRL----GEYGEGGTGVTVVEL 785 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Clostridium botulinum Ba4 str. 657] Sequence ID: C3KTI4.1 Length: 788 Range 1: 1 to 533 Score:236 bits(602), Expect:1e-64, Method:Compositional matrix adjust., Identities:159/548(29%), Positives:279/548(50%), Gaps:17/548(3%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 ++ ++ LE+NKI + L + K +L+P+ + + T E L Sbjct 1 MKDKSIKVLEFNKIQEILKNYTCTKAGKDIIEDLKPYDSVYEVREHLEETKEAFKLLITK 60 Query 75 NGISLES-FDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLF 133 E +D ++G+ L P L +I L+ + + + K + Y L Sbjct 61 GAPPFEGVYDIRNGIYLAEKGSALLPGQLLKIAAVLRCARRFREYINH-KEQEESYRVLE 119 Query 134 NLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQD 193 N+ + ++ ++ +++ + I AS L++ R L+ + ++++ +++ Sbjct 120 NICEGIFSLPKIEEEIFNAIEGEDEIADRASSTLYNIRRSLKEKNYSVRDKINSLVRSYS 179 Query 194 IRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKA 253 + LQ++++ +R YVLP++A+ K + G+ S +G+T+FIEP +L ++++ Sbjct 180 --SYLQENIYTVRRDRYVLPVKAEHKGAVPGLVHDQSSTGATLFIEPMSLVNLNNEIKEL 237 Query 254 QNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPR 313 + E +RIL LS + + + I+ + D I A+ KFA + P Sbjct 238 MLKEKAEIERILTVLSAKINANITGVKTDANIVWELDFIFAKAKFASEYNCTCPTI---- 293 Query 314 DLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 + +I +HPL ++ ++ + + L + +++GPN GGKTV +KTV Sbjct 294 NDEGIVDIIEGRHPL--IDRREVVPISVKLGEEFTS------LMITGPNTGGKTVTLKTV 345 Query 374 GIIALMAKAGLFVSC-DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANE 432 G+I LMA +GL + + + I + N+F ++GD Q+ E+ LSTFS H+ I I ++A+E Sbjct 346 GLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDKADE 405 Query 433 LSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSM 492 SL+L DE GTDP G A+A S LE + A +I TTH+S LK A N S+ Sbjct 406 NSLVLFDELGAGTDPTEGAALAISILENLRKRGAKIIATTHYSELKAYALRKEGVENASV 465 Query 493 EFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQL 552 EF+ L PTY+LL GIPG+S A E+++R+GL + II AR +E+ R E L++ LQ Sbjct 466 EFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENISNENIRFEELIQNLQE 525 Query 553 KRIEINEE 560 K I+ E+ Sbjct 526 KSIKAQED 533 Range 2: 607 to 787 Score:64.3 bits(155), Expect:4e-09, Method:Compositional matrix adjust., Identities:52/200(26%), Positives:93/200(46%), Gaps:19/200(9%) Query 750 LQEIEKSTKEKVRSAQQTAKEAQSQGRSPEFWKPGMSAKSTKLKEKGVVLKTADSKGNIE 809 L+E K K+K+ S ++ + +G + + K G + +K +VL D+KG++ Sbjct 607 LEEERKKLKDKLDSIEEKEIKTVHKGEALKNVKEGDEVLLASINQKVIVLSKPDNKGDVL 666 Query 810 CQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQ 869 Q GI+KI +L N +S + K L N +K + Sbjct 667 VQAGIMKITANIKDL----RAAKGSNFNSNSSKTKKSKKLNLNLRKVES----------- 711 Query 870 HGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYK 929 ++ L G +E++ +D LD+ + + V I+HG G G +++++ L+ + Sbjct 712 ----SVDLRGMDAEEAIYTVDKYLDEAYLGGLGEVTIVHGKGTGVLRKTIMDMLKGHPHV 767 Query 930 LRFRGGRHGEGGDGVTIVEF 949 R+R G +GEGG GVT+VE Sbjct 768 KRYRLGEYGEGGTGVTVVEI 787 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Sequence ID: Q8RIK8.1 Length: 778 Range 1: 9 to 532 Score:235 bits(600), Expect:2e-64, Method:Compositional matrix adjust., Identities:163/543(30%), Positives:281/543(51%), Gaps:25/543(4%) Query 23 LEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNG---ISL 79 LE++K+ + + H+++ LEP+ +L N + +DL + G I L Sbjct 9 LEFDKLKELILANIVIDHNREVIENLEPYKDLSALNNELKTVKDFMDLLSFDGGFEAIGL 68 Query 80 ESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDL 139 + + +L + G L + L+ I + L+ FK KY L + ++ Sbjct 69 RNIN-SLMEKIKLIGTYLEVEELWNINVNLRTVR----IFKSRLDELGKYKQLREMIGNI 123 Query 140 KPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQ 199 + +NK+++ + I AS +L R + I + +E+ ++ + NA Q Sbjct 124 PNLRVIEDVINKTINPEKEIKDDASLDLRDIRLHKKTLNMNIKRKFEELFEEPSLSNAFQ 183 Query 200 DDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEV 259 + + RDG V P++ D K I+GI S SG TVFIEP ++ ++ + + + Sbjct 184 EKIITERDGRMVTPVKYDFKGLIKGIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKE 243 Query 260 EEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPR- 318 E ++IL +++ +DIL E + D + A++ I+ ++ P N Sbjct 244 EIRKILLRIAELLRNNKDDILIIGEKVMYLDILNAKS-----IYAVENRCEIPTVSNKEI 298 Query 319 FSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPY-VWVLSGPNAGGKTVAMKTVGIIA 377 SL A+HP F+ ++K + P + Y + +++GPN GGKTVA+KT G++ Sbjct 299 LSLEKARHP-FIDKDK--------VTPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLT 349 Query 378 LMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLI 436 LMA +G+ + + + ++I +E +F ++GD Q+ E+ LS+FS HL +K I E + SL+ Sbjct 350 LMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLV 409 Query 437 LLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEP 496 LLDE GTDP G A A + ++Y + KK ITTH+S +K N+ SMEF Sbjct 410 LLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITTHYSQVKAYGYNEEGIETASMEFNT 469 Query 497 HKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIE 556 L PTY+LL GIPG+S A+ +A+RMGL +II KAR Y +++++E +++ ++ K E Sbjct 470 DTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKAREYISEDNKKVEKMIENIKTKSQE 529 Query 557 INE 559 ++E Sbjct 530 LDE 532 Range 2: 652 to 775 Score:45.8 bits(107), Expect:0.002, Method:Compositional matrix adjust., Identities:43/150(29%), Positives:71/150(47%), Gaps:26/150(17%) Query 798 VLKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYH 857 +LK SK + Q GILK+++P+ E +K + + +K + Sbjct 652 ILKINTSKESAMVQSGILKLEVPFDE----------------------IKIVEEKKEKVY 689 Query 858 NLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKE 917 N+ + + P I L G VDE++ +L+ LD+ V +IHG G G ++E Sbjct 690 NVNNHKKTPVRSE----IDLRGKMVDEAVYELETYLDRATLNGYTEVYVIHGKGTGALRE 745 Query 918 SVRRHLEDSSYKLRFRGGRHGEGGDGVTIV 947 + ++L+ Y +R G HGEGG G T+V Sbjct 746 GILKYLKACKYVKEYRIGGHGEGGLGCTVV 775 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Listeria welshimeri serovar 6b str. SLCC5334] Sequence ID: A0AHX3.1 Length: 785 Range 1: 9 to 575 Score:235 bits(600), Expect:2e-64, Method:Compositional matrix adjust., Identities:186/588(32%), Positives:301/588(51%), Gaps:32/588(5%) Query 23 LEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEM----------LDLNT 72 LE++KI + L FA+ ++ EL P NF S++ L + Sbjct 9 LEFDKIKKQLTEFASSSLGEQAILELAPA-----TNFQVVQKSQLETEEGAKIIRLRGSA 63 Query 73 ETNGISLESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNL 132 G++ D L+ G L+ +YQI L++ +++F + P L Sbjct 64 PITGLT----DVFAHLKRLEIGGDLNGLEIYQIGSNLRVSRQMKNFMTDLLEMGVELPLL 119 Query 133 FNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQ 192 LS++L E+ + SVD G IL +AS L + R L + ++ E+L+ L+ + Sbjct 120 GALSDELLVLKEVEEDIAISVDESGKILDTASEALSTIRRTLRRTEDRVREKLESYLRDR 179 Query 193 DIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEK 252 + L D V +R+ YV+P++ + K GI S SG T+FIEPQ++ + + Sbjct 180 NASKMLSDAVITIRNDRYVIPVKQEYKGHYGGIVHDQSASGQTLFIEPQSVVDLNNERKA 239 Query 253 AQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKP 312 Q + E +RIL E+S +I ++ IL ++D I A+ +F + + P Sbjct 240 LQAKEKQEIERILAEISASLAGWINEIHHNTFILGRYDFIFAKARFGKAMKAVTPHLSDA 299 Query 313 RDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKT 372 ++ LI A+HPL L+ +AND++L GE + V++GPN GGKT+ +KT Sbjct 300 GIVH----LIAARHPL--LDAANVVANDIYL-----GEDFTTI-VITGPNTGGKTITLKT 347 Query 373 VGIIALMAKAGLFVSC-DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQAN 431 +G++ LMA++GL + + + I +E++F ++GD Q+ E+ LSTFS H+ I I E+ N Sbjct 348 LGLLTLMAQSGLQIPAQEDSTIAVFEHVFADIGDEQSIEQSLSTFSSHMTNIVSILEKVN 407 Query 432 ELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGS 491 SLIL DE GTDP G A+A + L+ K A+V+ TTH+ LK N N S Sbjct 408 HKSLILYDELGAGTDPQEGAALAIAILDASHEKGASVVATTHYPELKAYGYNRVHATNAS 467 Query 492 MEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQ 551 +EF L PTYKLL G+PG+S A +++ R+GL+ NII +AR+ +ES + +++ L+ Sbjct 468 VEFNVETLSPTYKLLIGVPGRSNAFDISRRLGLSENIITEARSLVDTESADLNDMISSLE 527 Query 552 LKRIEINEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNK 599 KR E + L + D+ K L+ E + + L+E R K Sbjct 528 EKRNLAETEYEEARELARGADALLKDLQKEITNYYQQKDKLMEQAREK 575 Range 2: 619 to 784 Score:60.8 bits(146), Expect:5e-08, Method:Compositional matrix adjust., Identities:56/201(28%), Positives:89/201(44%), Gaps:44/201(21%) Query 758 KEKVRSAQQTAKEAQSQGRSPEFWKPGMSAKSTKLKEKGVVL-KTADSKGNIECQFGILK 816 K K ++ +T +A Q P ++ G + + L +KG +L K +D + N+ Q GI+K Sbjct 619 KAKPKTINKTIPQAPKQ--KPHVFQVGDNVRVLSLGQKGTLLNKISDKEWNV--QIGIIK 674 Query 817 IKIPYHELIPGNETLPKQ--------NSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTL 868 +KI +L PK+ +S SP KS L+++ Sbjct 675 MKIKTTDLEYIQPETPKKQRIITSVHSSDSPVKSELDLR--------------------- 713 Query 869 QHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSY 928 G +++L K+D LD+ +V IIHG G G ++ V +L++ Sbjct 714 ----------GERYEDALQKVDKYLDEALLAGYPQVAIIHGKGTGALRTGVTEYLKNHRM 763 Query 929 KLRFRGGRHGEGGDGVTIVEF 949 R G EGG+GVTIVEF Sbjct 764 VKSIRFGAAAEGGNGVTIVEF 784 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Listeria monocytogenes serotype 4b str. CLIP 80459] Sequence ID: C1L2D7.1 Length: 785 Range 1: 9 to 575 Score:234 bits(598), Expect:4e-64, Method:Compositional matrix adjust., Identities:184/583(32%), Positives:299/583(51%), Gaps:22/583(3%) Query 23 LEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSE-----MLDLNTETNGI 77 LE++KI + L FA+ ++ EL P + + T E L + G+ Sbjct 9 LEFDKIKKQLTEFASSSLGEQAILELAPATDFQVVQKTQLETEEGAKIIRLRGSAPITGL 68 Query 78 SLESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSN 137 + D L+ G L+ +YQI L++ +++F + P L LS+ Sbjct 69 T----DVFAHLKRLEIGGDLNGLEIYQIGSNLRVSRQMKNFMNDLLEIGVELPLLGALSD 124 Query 138 DLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNA 197 +L E+ + SVD G +L +AS L + R L + ++ E+L+ L+ ++ Sbjct 125 ELLVLKEVEEDIAISVDESGKVLDTASEALSTIRRTLRRTEDRVREKLESYLRDRNASKM 184 Query 198 LQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDV 257 L D V +R+ YV+P++ + K GI S SG T+FIEPQ++ + + Q Sbjct 185 LSDAVITIRNDRYVIPVKQEYKGHYGGIVHDQSASGQTLFIEPQSVVDLNNERKALQAKE 244 Query 258 EVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNP 317 + E +RIL E+S +I ++ IL +FD I A+ +F + + P ++ Sbjct 245 KQEIERILAEISASLAAWINEIHHNTFILGRFDFIFAKARFGKAMKAVTPHLSDAGVVH- 303 Query 318 RFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIA 377 LI A+HPL L+ K +AND++L GE + V++GPN GGKT+ +KT+G++ Sbjct 304 ---LIAARHPL--LDAAKVVANDIYL-----GEDFTTI-VITGPNTGGKTITLKTLGLLT 352 Query 378 LMAKAGLFVSC-DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLI 436 LMA++GL + + + I +E++F ++GD Q+ E+ LSTFS H+ I I N+ SLI Sbjct 353 LMAQSGLQIPAQEDSTIAVFEHVFADIGDEQSIEQSLSTFSSHMTNIVSILGNVNQKSLI 412 Query 437 LLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEP 496 L DE GTDP G A+A + L+ K A+V+ TTH+ LK N N S+EF Sbjct 413 LYDELGAGTDPQEGAALAIAILDASHAKGASVVATTHYPELKAYGYNRVHATNASVEFNV 472 Query 497 HKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIE 556 L PTYKLL G+PG+S A +++ R+GL+ NII +AR+ +ES + +++ L+ KR Sbjct 473 ETLSPTYKLLIGVPGRSNAFDISRRLGLSENIITEARSLVDTESADLNDMISSLEEKRNL 532 Query 557 INEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNK 599 E + L + D+ K L+ E + + L+E K Sbjct 533 AETEYEEARELARGADNLLKDLQKEISNYYQQKDKLIEQASEK 575 Range 2: 631 to 784 Score:60.5 bits(145), Expect:6e-08, Method:Compositional matrix adjust., Identities:52/187(28%), Positives:83/187(44%), Gaps:42/187(22%) Query 772 QSQGRSPEFWKPGMSAKSTKLKEKGVVL-KTADSKGNIECQFGILKIKIPYHELIPGNET 830 Q+ + P ++ G + + L +KG +L K +D + N+ Q GI+K+KI +L Sbjct 631 QAPKQKPHVFQEGDNVRVLSLGQKGTLLNKISDKEWNV--QIGIIKMKIKTTDLEYIQPE 688 Query 831 LPKQ--------NSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTV 882 PK+ +S SP KS L+++ G Sbjct 689 KPKKQRIITSVHSSGSPAKSELDLR-------------------------------GERY 717 Query 883 DESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGD 942 +++L K+D LD+ +V IIHG G G ++ V +L++ R G EGG+ Sbjct 718 EDALQKVDKYLDEALLAGYPQVAIIHGKGTGALRTGVTEYLKNHRMVKSIRFGAAAEGGN 777 Query 943 GVTIVEF 949 GVTIVEF Sbjct 778 GVTIVEF 784 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Clostridium botulinum B1 str. Okra] Sequence ID: B1IMK5.1 Length: 788 Range 1: 1 to 533 Score:234 bits(598), Expect:5e-64, Method:Compositional matrix adjust., Identities:157/548(29%), Positives:279/548(50%), Gaps:17/548(3%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 ++ ++ LE+NKI ++L + +K +L+P+ + + T E L Sbjct 1 MKDKSIKVLEFNKIQEFLKNYTCTKAAKDIIEDLKPYDSVYEVREHLEETKEAFKLLITK 60 Query 75 NGISLES-FDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLF 133 E +D + ++ + L P L +I L+ + + + K Y L Sbjct 61 GAPPFEGVYDIRSGISLAEKRSTLLPGQLLKIAAVLRCARRFKEYINH-KEEEESYRVLE 119 Query 134 NLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQD 193 N+ + ++ ++ +++ + I AS L++ R L+ + ++++ +++ Sbjct 120 NICEGIFSLPKIEEEIFNAIEGEDEIADRASSTLYNIRRSLKEKNYSVRDKINSLVRSYS 179 Query 194 IRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKA 253 + LQ++++ +R YVLP++A+ K + G+ S +G+T+FIEP +L ++++ Sbjct 180 --SYLQENIYTVRGDRYVLPVKAEHKGAVPGLVHDQSSTGATLFIEPMSLVNLNNEIKEL 237 Query 254 QNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPR 313 + E +RIL LS + + + I+ + D I A+ KFA + P Sbjct 238 MLKEKAEIERILTVLSAKINANITGVKTDANIVWELDFIFAKAKFASEYNCTCPTI---- 293 Query 314 DLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 + +I +HPL ++ ++ + + L + +++GPN GGKTV +KTV Sbjct 294 NDEGIVDIIEGRHPL--IDRREVVPISVKLGEEFTS------LMITGPNTGGKTVTLKTV 345 Query 374 GIIALMAKAGLFVSC-DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANE 432 G+I LMA +GL + + + I + N+F ++GD Q+ E+ LSTFS H+ I I ++A+E Sbjct 346 GLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDKADE 405 Query 433 LSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSM 492 SL+L DE GTDP G A+A S LE + +I TTH+S LK A N S+ Sbjct 406 NSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYALKKEGVENASV 465 Query 493 EFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQL 552 EF+ L PTY+LL GIPG+S A E+++R+GL + II AR +E+ R E L++ LQ Sbjct 466 EFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENISNENIRFEELIENLQE 525 Query 553 KRIEINEE 560 K I+ E+ Sbjct 526 KSIKAQED 533 Range 2: 607 to 787 Score:63.5 bits(153), Expect:6e-09, Method:Compositional matrix adjust., Identities:52/200(26%), Positives:94/200(47%), Gaps:19/200(9%) Query 750 LQEIEKSTKEKVRSAQQTAKEAQSQGRSPEFWKPGMSAKSTKLKEKGVVLKTADSKGNIE 809 L+E K K+K+ S ++ + +G + + K G + +K +VL D+KG++ Sbjct 607 LEEERKKLKDKLDSIEEKEIKTVHKGEALKNVKEGDEVLLASINQKVIVLSKPDNKGDVL 666 Query 810 CQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQ 869 Q GI+KI +L NS+S K L N ++ + Sbjct 667 VQAGIMKITANIKDL----RAAKGSNSNSSSSKIKKSKKLNLNLRRVES----------- 711 Query 870 HGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYK 929 ++ L G +E++ +D LD+ + + V I+HG G G +++++ L+ S+ Sbjct 712 ----SVDLRGMDAEEAIYTVDKYLDEAYLGGLGEVTIVHGKGTGVLRKTIMDMLKGHSHV 767 Query 930 LRFRGGRHGEGGDGVTIVEF 949 ++R G +GEGG GVT+VE Sbjct 768 KKYRLGEYGEGGTGVTVVEL 787 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Clostridium botulinum A3 str. Loch Maree] Sequence ID: B1L0S3.1 Length: 788 Range 1: 1 to 533 Score:234 bits(597), Expect:5e-64, Method:Compositional matrix adjust., Identities:158/548(29%), Positives:278/548(50%), Gaps:17/548(3%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 ++ ++ LE+NKI + L + +K +L+P+ + + T E L Sbjct 1 MKDKSIKVLEFNKIQEILKNYTCTKAAKDIIEDLKPYDSVYEVREHLEETKEAFKLLITK 60 Query 75 NGISLES-FDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLF 133 E +D ++G+ L P L +I L+ + + + K Y L Sbjct 61 GAPPFEGVYDIRNGIYLAEKGSALLPGQLLKIAAVLRCARRFKEYINH-KEEEESYRVLE 119 Query 134 NLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQD 193 N+ + ++ ++ +++ + I AS L++ R L+ + ++++ +++ Sbjct 120 NICEGIFSLPKIEEEIFNAIEGEDEIADRASSILYNIRRSLKEKNYSVRDKINSLVRSYS 179 Query 194 IRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKA 253 + LQ++++ +R YVLP++ + K + G+ S +G+T+FIEP +L ++++ Sbjct 180 --SYLQENIYTVRGDRYVLPVKVEHKGAVPGLVHDQSSTGATLFIEPMSLVNLNNEIKEL 237 Query 254 QNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPR 313 + E +RIL LS + + + I+ + D I A+ KFA + P Sbjct 238 MLKEKAEIERILTVLSAKINANITGVKTDANIVWELDFIFAKAKFASEYNCTCPTI---- 293 Query 314 DLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 + +I +HPL ++ ++ + + L + +++GPN GGKTV +KTV Sbjct 294 NDEGIVDIIEGRHPL--IDRREVVPISVKLGEEFTS------LMITGPNTGGKTVTLKTV 345 Query 374 GIIALMAKAGLFVSC-DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANE 432 G+I LMA +GL + + + I + N+F ++GD Q+ E+ LSTFS H+ I I ++A+E Sbjct 346 GLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDKADE 405 Query 433 LSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSM 492 SL+L DE GTDP G A+A S LE + A +I TTH+S LK A N S+ Sbjct 406 NSLVLFDELGAGTDPTEGAALAISILENLRKRGAKIIATTHYSELKAYALRKEGVENASV 465 Query 493 EFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQL 552 EF+ L PTY+LL GIPG+S A E+++R+GL + II AR +E+ R E L++ LQ Sbjct 466 EFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENISNENIRFEELIQNLQE 525 Query 553 KRIEINEE 560 K I+ E+ Sbjct 526 KSIKAQED 533 Range 2: 607 to 787 Score:67.0 bits(162), Expect:6e-10, Method:Compositional matrix adjust., Identities:52/200(26%), Positives:94/200(47%), Gaps:19/200(9%) Query 750 LQEIEKSTKEKVRSAQQTAKEAQSQGRSPEFWKPGMSAKSTKLKEKGVVLKTADSKGNIE 809 L+E K K+K+ S ++ + +G + + K G + +K +VL D+KG++ Sbjct 607 LEEERKKLKDKLDSIEEKEIKTVHKGEALKNVKEGDEVLLASINQKVIVLSKPDNKGDVL 666 Query 810 CQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQ 869 Q GI+KI +L + + S+ N+ K NL L+ Sbjct 667 VQAGIMKITANIKDL------------RAAKGSNFNINSSKTKKSKKLNLN-------LR 707 Query 870 HGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYK 929 +++ L G +E++ +D LD+ + + V I+HG G G +++++ L+ + Sbjct 708 KVESSVDLRGMDAEEAIYTVDKYLDEAYLGGLGEVTIVHGKGTGVLRKTIMDMLKGHPHV 767 Query 930 LRFRGGRHGEGGDGVTIVEF 949 R R G +GEGG GVT+VE Sbjct 768 KRHRLGEYGEGGTGVTVVEI 787 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus agalactiae NEM316] Sequence ID: Q8E3J5.1 Length: 779 Range 1: 6 to 587 Score:234 bits(596), Expect:8e-64, Method:Compositional matrix adjust., Identities:186/610(30%), Positives:307/610(50%), Gaps:52/610(8%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISL 79 L +LE+NK+ + + + S++ SELEP E F S+M + E + + Sbjct 6 LEQLEFNKVKELILPYLKTEQSQEELSELEPMTEAPKIEKSFNEISDMEQIFVEHHSFGI 65 Query 80 ESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLS--- 136 S + L+R L + + ++L+ K+ S + Y +L N+S Sbjct 66 VSL--SSISESLKRLELSADLNIQELLVIKKVLQSSSDMIHF-------YSDLDNVSFQS 116 Query 137 -NDLKPHMELHAKLNKSVDM--DGNILSS-ASPELHSARSRLEHAKRKIVEQLDEILKKQ 192 + L ++E L S DG L ASPEL R +L +++R++ + L ++LK++ Sbjct 117 LDRLFENLEQFPNLQGSFQAINDGGFLEHFASPELERIRRQLTNSERRVRQILQDMLKEK 176 Query 193 DIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEK 252 L +++ R G VLP++ ++ I G+ +S SGSTV+IEP+A+ ++ + Sbjct 177 --AELLSENLIASRSGRSVLPVKNTYRNRISGVVHDISSSGSTVYIEPRAVVTLNEEITQ 234 Query 253 AQNDVEVEEQRILRELSKDCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLK 311 + D EE RIL S D H I +++ IL D + A+ F PE Sbjct 235 LRADERHEESRILHAFS-DLLRPHVATIRNNAWILGHLDFVRAKYLFMSDNKATIPEISN 293 Query 312 PRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMK 371 L +LIN +HPL +ANDLH + V++GPN GGKT+ +K Sbjct 294 DSTL----ALINVRHPLL----SNPVANDLHF------DQDLTAIVITGPNTGGKTIMLK 339 Query 372 TVGIIALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQA 430 T+G+ LM ++GL V DK ++I + NIF ++GD Q+ E+ LSTFS H+ I I +A Sbjct 340 TLGLAQLMGQSGLPVLADKGSKIAVFNNIFADIGDEQSIEQSLSTFSSHMTHIVSILNEA 399 Query 431 NELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNG 490 + SL+L DE GTDP G ++A + LE+ + + TTH+ LK + N Sbjct 400 DHNSLVLFDELGAGTDPQEGASLAMAILEHLRLSNIKTMATTHYPELKAYGIETNFVENA 459 Query 491 SMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKEL 550 SMEF+ L PTY+ + G+PG+S A E+A R+GL I+++A+ S+S+ + ++++L Sbjct 460 SMEFDAETLSPTYRFMQGVPGRSNAFEIASRLGLAPFIVKQAKQMTDSDSD-VNRIIEQL 518 Query 551 QLKRI----------EINEELTKQNLLTQKLDSEF-----KSLKNEKEQLSELRGDLVEN 595 + + + EI +E K N +KL +EF K L+ ++ E+ D+ N Sbjct 519 EAQTLETRRRLDHIKEIEQENLKFNRAVKKLYNEFSHERDKELEKIYQEAQEIV-DMALN 577 Query 596 YRNKLQKRLN 605 + + K+LN Sbjct 578 ESDTILKKLN 587 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Clostridium botulinum F str. Langeland] Sequence ID: A7GHZ0.1 Length: 788 Range 1: 1 to 533 Score:233 bits(594), Expect:2e-63, Method:Compositional matrix adjust., Identities:157/548(29%), Positives:277/548(50%), Gaps:17/548(3%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 ++ ++ LE+NKI + L + +K +L+P+ + + E L Sbjct 1 MKDKSIKVLEFNKIQEILKNYTCTKAAKDIIEDLKPYDSVYEVREHLEEAKEAFKLLITK 60 Query 75 NGISLES-FDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLF 133 E +D ++G+ L P L +I L+ + + + K Y L Sbjct 61 GAPPFEGVYDIRNGIYLAEKGSALLPGQLLKIAAVLRCARRFKEYINH-KEEEESYRVLE 119 Query 134 NLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQD 193 N+ + ++ ++ +++ + I AS L++ R L+ + ++++ +++ Sbjct 120 NICEGIFSLPKIEEEIFNAIEGEDEIADRASSTLYNIRRSLKEKNYSVRDKINSLVRSYS 179 Query 194 IRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKA 253 + LQ++++ +R YVLP++A+ K + G+ S +G+T+FIEP +L ++++ Sbjct 180 --SYLQENIYTVRGDRYVLPVKAEHKGAVPGLVHDQSSTGATLFIEPMSLVNLNNEIKEL 237 Query 254 QNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPR 313 + E +RIL LS + + + I+ + D I A+ KFA + P Sbjct 238 MLKEKAEIERILTVLSAKINANITGVKTDANIVWELDFIFAKAKFASEYNCTCPTI---- 293 Query 314 DLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 + +I +HPL ++ ++ + + L + +++GPN GGKTV +KTV Sbjct 294 NNEGIVDIIEGRHPL--IDRREVVPISVKLGEEFTS------LMITGPNTGGKTVTLKTV 345 Query 374 GIIALMAKAGLFVSC-DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANE 432 G+I LMA +GL + + + I + N+F ++GD Q+ E+ LSTFS H+ I I ++A+E Sbjct 346 GLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDKADE 405 Query 433 LSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSM 492 SL+L DE GTDP G A+A S LE + +I TTH+S LK A N S+ Sbjct 406 NSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYALRKEGVENASV 465 Query 493 EFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQL 552 EF+ L PTY+LL GIPG+S A E+++R+GL + II AR +E+ R E L++ LQ Sbjct 466 EFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENISNENIRFEELIENLQE 525 Query 553 KRIEINEE 560 K I+ E+ Sbjct 526 KSIKAQED 533 Range 2: 607 to 787 Score:67.8 bits(164), Expect:3e-10, Method:Compositional matrix adjust., Identities:53/200(27%), Positives:94/200(47%), Gaps:19/200(9%) Query 750 LQEIEKSTKEKVRSAQQTAKEAQSQGRSPEFWKPGMSAKSTKLKEKGVVLKTADSKGNIE 809 L+E K K+K+ S ++ + +G + + K G + +K +VL D+KG++ Sbjct 607 LEEERKKLKDKLDSIEEKEIKTVHKGEALKNVKEGDEVLLASINQKVIVLSKPDNKGDVL 666 Query 810 CQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQ 869 Q GI+KI +L + + S+ N K NL L+ Sbjct 667 VQAGIMKITANIKDL------------RAAKGSNFNSSSSKIKKSKKLNLN-------LR 707 Query 870 HGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYK 929 +++ L G +E++ +D LD+ + + V I+HG G G +++++ L+ S+ Sbjct 708 RVESSVDLRGMDAEEAIYTVDKYLDEAYLGGLGEVTIVHGKGTGVLRKTIMDMLKGHSHV 767 Query 930 LRFRGGRHGEGGDGVTIVEF 949 R R G +GEGG GVT+VE Sbjct 768 KRHRLGEYGEGGTGVTVVEL 787 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus agalactiae A909] Sequence ID: Q3JZH6.1 Length: 779 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus agalactiae 2603V/R] Sequence ID: Q8DXX6.1 Length: 779 Range 1: 6 to 552 Score:232 bits(592), Expect:3e-63, Method:Compositional matrix adjust., Identities:178/573(31%), Positives:294/573(51%), Gaps:37/573(6%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNG--- 76 L +LE+NK+ + + + S++ SELEP E F S+M + E + Sbjct 6 LEQLEFNKVKELILPYLKTEQSQEELSELEPMTEAPKIEKSFNEISDMEQIFVEHHSFGI 65 Query 77 ISLESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLS 136 +SL S +L + L+ A L+ Q L I L+ + F Y + +L L Sbjct 66 VSLSSISESLKR--LELSADLNIQELLAIKKVLQSSSDMIHF--YSDLDNVSFQSLDRLF 121 Query 137 NDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRN 196 +L+ L ++++ G + ASPEL R +L +++R++ + L ++LK++ Sbjct 122 ENLEQFPNLQGSF-QAINDGGFLEHFASPELERIRRQLTNSERRVRQILQDMLKEK--AE 178 Query 197 ALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQND 256 L +++ R G VLP++ ++ I G+ +S SGSTV+IEP+A+ ++ + + D Sbjct 179 LLSENLIASRSGRSVLPVKNTYRNRISGVVHDISSSGSTVYIEPRAVVTLNEEITQLRAD 238 Query 257 VEVEEQRILRELSKDCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDL 315 EE RIL S D H I +++ IL D + A+ F PE L Sbjct 239 ERHEESRILHAFS-DLLRPHVATIRNNAWILGHLDFVRAKYLFMSDNKATIPEISNDSTL 297 Query 316 NPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGI 375 +LIN +HPL +ANDLH + V++GPN GGKT+ +KT+G+ Sbjct 298 ----ALINVRHPLL----SNPVANDLHF------DQDLTAIVITGPNTGGKTIMLKTLGL 343 Query 376 IALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELS 434 LM ++GL V DK ++I + NIF ++GD Q+ E+ LSTFS H+ I I +A+ S Sbjct 344 AQLMGQSGLPVLADKGSKIAVFNNIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNS 403 Query 435 LILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEF 494 L+L DE GTDP G ++A + LE+ + + TTH+ LK + N SMEF Sbjct 404 LVLFDELGAGTDPQEGASLAMAILEHLRLSNIKTMATTHYPELKAYGIETNFVENASMEF 463 Query 495 EPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKR 554 + L PTY+ + G+PG+S A E+A R+GL I+++A+ S+S+ + ++++L+ + Sbjct 464 DAETLSPTYRFMQGVPGRSNAFEIASRLGLAPFIVKQAKQMTDSDSD-VNRIIEQLEAQT 522 Query 555 IEIN------EELTKQNLLTQKLDSEFKSLKNE 581 +E +E+ ++NL K + K L NE Sbjct 523 LETRRRLDHIKEVEQENL---KFNRAVKKLYNE 552 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Listeria monocytogenes serotype 4b str. F2365] Sequence ID: Q720J7.1 Length: 785 Range 1: 9 to 575 Score:231 bits(590), Expect:5e-63, Method:Compositional matrix adjust., Identities:182/583(31%), Positives:298/583(51%), Gaps:22/583(3%) Query 23 LEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDL-----NTETNGI 77 LE++KI + L FA+ ++ EL P + + T E + + G+ Sbjct 9 LEFDKIKKQLTEFASSSLGEQAILELAPATDFQVVQKTQLETEEGAKIIRLRGSAPITGL 68 Query 78 SLESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSN 137 + D L+ G L+ +YQI L++ +++F + P L LS+ Sbjct 69 T----DVFAHLKRLEIGGDLNGLEIYQIGSNLRVSRQMKNFMNDLLEIGVELPLLGALSD 124 Query 138 DLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNA 197 +L E+ + SVD G +L +AS L + R L + ++ E+L+ L+ ++ Sbjct 125 ELLVLKEVEEDIAISVDESGKVLDTASEALSTIRRTLRRTEDRVREKLESYLRDRNASKM 184 Query 198 LQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDV 257 L D V +R+ YV+P++ + K GI S SG T+FIEPQ++ + + Q Sbjct 185 LSDAVITIRNDRYVIPVKQEYKGHYGGIVHDQSASGQTLFIEPQSVVDLNNERKALQAKE 244 Query 258 EVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNP 317 + E +RIL E+S +I ++ IL +FD I A+ +F + + P ++ Sbjct 245 KQEIERILAEISASLAAWINEIHHNTFILGRFDFIFAKARFGKAMKAVTPHLSDAGVVH- 303 Query 318 RFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIA 377 LI A+HPL L+ K +AND++L GE + V++GPN GGKT+ +KT+G++ Sbjct 304 ---LIAARHPL--LDAAKVVANDIYL-----GEDFTTI-VITGPNTGGKTITLKTLGLLT 352 Query 378 LMAKAGLFVSC-DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLI 436 LMA++GL + + + I +E++F ++GD Q+ E+ LSTFS H+ I I N+ SLI Sbjct 353 LMAQSGLQIPAQEDSTIAVFEHVFADIGDEQSIEQSLSTFSSHMTNIVSILGNVNQKSLI 412 Query 437 LLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEP 496 L DE GTDP G A+A + L+ K A+V+ TTH+ LK N N S+EF Sbjct 413 LYDELGAGTDPQEGAALAIAILDASHAKGASVVATTHYPELKAYGYNRVHATNASVEFNV 472 Query 497 HKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIE 556 L PTYKLL G+PG+S A +++ R+GL+ NII +AR+ +ES + +++ L+ KR Sbjct 473 ETLSPTYKLLIGVPGRSNAFDISRRLGLSENIITEARSLVDTESADLNDMISSLEEKRNL 532 Query 557 INEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNK 599 E + L + + K L+ E + + L+E K Sbjct 533 AETEYEEARELARGAGNLLKDLQKEISNYYQQKDKLIEQASEK 575 Range 2: 631 to 784 Score:59.7 bits(143), Expect:9e-08, Method:Compositional matrix adjust., Identities:52/187(28%), Positives:83/187(44%), Gaps:42/187(22%) Query 772 QSQGRSPEFWKPGMSAKSTKLKEKGVVL-KTADSKGNIECQFGILKIKIPYHELIPGNET 830 Q+ + P ++ G + + L +KG +L K +D + N+ Q GI+K+KI +L Sbjct 631 QAPKQKPHVFQEGDNVRVLSLGQKGTLLNKISDKEWNV--QIGIIKMKIKTVDLEYIQPE 688 Query 831 LPKQ--------NSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQLLGCTV 882 PK+ +S SP KS L+++ G Sbjct 689 KPKKQRIITSVHSSGSPAKSELDLR-------------------------------GERY 717 Query 883 DESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGD 942 +++L K+D LD+ +V IIHG G G ++ V +L++ R G EGG+ Sbjct 718 EDALQKVDKYLDEALLAGYPQVAIIHGKGTGALRTGVTEYLKNHRMVKSIRFGAAAEGGN 777 Query 943 GVTIVEF 949 GVTIVEF Sbjct 778 GVTIVEF 784 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus thermophilus CNRZ1066] Sequence ID: Q5LY40.1 Length: 783 Range 1: 6 to 552 Score:231 bits(590), Expect:5e-63, Method:Compositional matrix adjust., Identities:178/570(31%), Positives:284/570(49%), Gaps:31/570(5%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISL 79 L +LE+NK+ + ++ +L P E FT EM ++ E +G ++ Sbjct 6 LDQLEFNKVKDQFTEYLQTEQAQAELCDLVPMTNPERIQNQFTEIQEMSEIFVEHHGFAI 65 Query 80 ESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSND 138 S D + L+ A L+ Q L I L+ + F Y + L L Sbjct 66 GSLRDISEPLRRLELDADLNIQELIAIKKVLQASADLSRF--YADLENVELIALKRLFEK 123 Query 139 LKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNAL 198 ++ L L +S++ G I ASPEL + R +L+ I + L +ILKK + L Sbjct 124 IEAFPSLQGSL-QSINDGGFIEHFASPELQNIRRQLKACDDAIRQTLQDILKKSG--HML 180 Query 199 QDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVE 258 +++ R+G VLP++ ++ I G+ +S SG+TV+IEP+A+ ++ + + D Sbjct 181 AENLIASRNGRSVLPVKNTYRNRIAGVVHDISSSGNTVYIEPRAVIQLNEKITQLRADER 240 Query 259 VEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPR 318 E RIL ELS I +++ IL D I + + I PE N Sbjct 241 HEMARILHELSDQLRPHTAAIANNAWILGHMDFIRGKYLYLHDKKAIIPEISD----NQT 296 Query 319 FSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIAL 378 L+N +HPL + +ANDL + V V++GPN GGKTV +KT+G+ L Sbjct 297 LQLLNVRHPLLI----NPVANDLRF------DEDLTVIVITGPNTGGKTVMLKTLGLAQL 346 Query 379 MAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLIL 437 MA++GL + DK + + ++ IF ++GD Q+ E+ LSTFS H+ I I A+ SL+L Sbjct 347 MAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILNTADSNSLVL 406 Query 438 LDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPH 497 +DE GTDP G ++A + LE+ + + + TTH+ LK N SMEF+ Sbjct 407 VDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVENASMEFDTA 466 Query 498 KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSES------ERMENLLKELQ 551 L PTY+ + G+PG+S A E+A R+GLN I+++A ++S E++E E Q Sbjct 467 TLRPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTDTDSDVNRIIEQLEAQTVETQ 526 Query 552 LKRIEINEELTKQNLLTQKLDSEFKSLKNE 581 KR+E +++ ++NL K + K L NE Sbjct 527 -KRLEHIKDVEQENL---KFNRAVKKLYNE 552 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus thermophilus LMG 18311] Sequence ID: Q5M2P5.1 Length: 783 Range 1: 6 to 552 Score:231 bits(589), Expect:6e-63, Method:Compositional matrix adjust., Identities:178/570(31%), Positives:284/570(49%), Gaps:31/570(5%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISL 79 L +LE+NK+ + ++ +L P E FT EM ++ E +G ++ Sbjct 6 LDQLEFNKVKDQFTEYLQTEQAQAELRDLVPMTNPERIQNQFTEIQEMSEIFVEHHGFAI 65 Query 80 ESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSND 138 S D + L+ A L+ Q L I L+ + F Y + L L Sbjct 66 GSLRDISEPLRRLELDADLNIQELIAIKKVLQASADLSRF--YADLENVELIALKRLFEK 123 Query 139 LKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNAL 198 ++ L L +S++ G I ASPEL + R +L+ I + L +ILKK + L Sbjct 124 IEAFPSLQGSL-QSINDGGFIEHFASPELQNIRRQLKACDDAIRQTLQDILKKSG--HML 180 Query 199 QDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVE 258 +++ R+G VLP++ ++ I G+ +S SG+TV+IEP+A+ ++ + + D Sbjct 181 AENLIASRNGRSVLPVKNTYRNRIAGVVHDISSSGNTVYIEPRAVIQLNEKITQLRADER 240 Query 259 VEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPR 318 E RIL ELS I +++ IL D I + + I PE N Sbjct 241 HEMARILHELSDQLRPHTAAIANNAWILGHMDFIRGKYLYLHDKKAIIPEISD----NQT 296 Query 319 FSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIAL 378 L+N +HPL + +ANDL + V V++GPN GGKTV +KT+G+ L Sbjct 297 LQLLNVRHPLLI----NPVANDLRF------DEDLTVIVITGPNTGGKTVMLKTLGLAQL 346 Query 379 MAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLIL 437 MA++GL + DK + + ++ IF ++GD Q+ E+ LSTFS H+ I I A+ SL+L Sbjct 347 MAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILNTADSNSLVL 406 Query 438 LDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPH 497 +DE GTDP G ++A + LE+ + + + TTH+ LK N SMEF+ Sbjct 407 VDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVENASMEFDTA 466 Query 498 KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSES------ERMENLLKELQ 551 L PTY+ + G+PG+S A E+A R+GLN I+++A ++S E++E E Q Sbjct 467 TLRPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTDTDSDVNRIIEQLEAQTVETQ 526 Query 552 LKRIEINEELTKQNLLTQKLDSEFKSLKNE 581 KR+E +++ ++NL K + K L NE Sbjct 527 -KRLEHIKDVEQENL---KFNRAVKKLYNE 552 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus thermophilus LMD-9] Sequence ID: Q03IU4.1 Length: 783 Range 1: 6 to 552 Score:231 bits(588), Expect:9e-63, Method:Compositional matrix adjust., Identities:178/570(31%), Positives:284/570(49%), Gaps:31/570(5%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISL 79 L +LE+NK+ + ++ +L P E FT EM ++ E +G ++ Sbjct 6 LDQLEFNKVKDQFTEYLQTEQAQAELRDLVPMTNPERIQNQFTEIQEMSEIFIEHHGFAI 65 Query 80 ESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSND 138 S D + L+ A L+ Q L I L+ + F Y + L L Sbjct 66 GSLRDISEPLRRLELDADLNIQELIAIKKVLQASADLSRF--YADLENVELIALKRLFEK 123 Query 139 LKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNAL 198 ++ L L +S++ G I ASPEL + R +L+ I + L +ILKK + L Sbjct 124 IEAFPSLQGSL-QSINDGGFIEHFASPELQNIRRQLKACDDAIRQTLQDILKKSG--HML 180 Query 199 QDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVE 258 +++ R+G VLP++ ++ I G+ +S SG+TV+IEP+A+ ++ + + D Sbjct 181 AENLIASRNGRSVLPVKNTYRNRIAGVVHDISSSGNTVYIEPRAVIQLNEKITQLRADER 240 Query 259 VEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPR 318 E RIL ELS I +++ IL D I + + I PE N Sbjct 241 HEMARILHELSDQLRPHTAAIANNAWILGHMDFIRGKYLYLHDKKAIIPEISD----NQT 296 Query 319 FSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIAL 378 L+N +HPL + +ANDL + V V++GPN GGKTV +KT+G+ L Sbjct 297 LQLLNVRHPLLI----NPVANDLRF------DEDLTVIVITGPNTGGKTVMLKTLGLAQL 346 Query 379 MAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLIL 437 MA++GL + DK + + ++ IF ++GD Q+ E+ LSTFS H+ I I A+ SL+L Sbjct 347 MAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILNTADSNSLVL 406 Query 438 LDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPH 497 +DE GTDP G ++A + LE+ + + + TTH+ LK N SMEF+ Sbjct 407 VDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVENASMEFDTA 466 Query 498 KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSES------ERMENLLKELQ 551 L PTY+ + G+PG+S A E+A R+GLN I+++A ++S E++E E Q Sbjct 467 TLRPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTDTDSDVNRIIEQLEAQTVETQ 526 Query 552 LKRIEINEELTKQNLLTQKLDSEFKSLKNE 581 KR+E +++ ++NL K + K L NE Sbjct 527 -KRLEHIKDVEQENL---KFNRAVKKLYNE 552 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Lactococcus lactis subsp. lactis Il1403] Sequence ID: Q9CF36.1 Length: 776 Range 1: 9 to 581 Score:229 bits(585), Expect:2e-62, Method:Compositional matrix adjust., Identities:178/621(29%), Positives:309/621(49%), Gaps:52/621(8%) Query 23 LEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISL-ES 81 LE++K+ + T ++ +L+P + E F ++ L E ++L ++ Sbjct 9 LEYDKVKEQFMNALTTAQGQQELKDLKPLTDKEKIQLLFDEVADFRLLTQENGLLNLGKT 68 Query 82 FDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDLKP 141 D T L+ A LS + +I ++L +IQ FF +++ + P+L + L+ Sbjct 69 NDLTEILRRLELEASLSGKEFVEIKKVIQLGINIQRFF--DEAENVETPSL---AITLEK 123 Query 142 HMELHAKLNK--SVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQ 199 ++L A + K D G++ +AS EL R+ ++ + +I + + E+L K ++L Sbjct 124 LVDLSALVKKLEIFDNAGSLYDNASLELMHIRASIKSHQSEIRKIMQEMLTKN--LSSLS 181 Query 200 DDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEV 259 ++V +R+ VLP++A+ K+ I G+ +S SG T++IEP A+ +L + + + Sbjct 182 ENVITIRNDRQVLPVKAENKNKIAGVVHDMSASGQTLYIEPNAVVSLNNKLNQKRIEERQ 241 Query 260 EEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRF 319 E RI REL+ DI ++ ++ D + A+ + PE +D+ Sbjct 242 EITRIYRELASQLKPYSFDIRQNAWLIGHIDFVRAKYLYLAANKATLPELTTDKDI---- 297 Query 320 SLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALM 379 +L A+HPL +E K + ND+ + V++GPN GGKT+ +KTVG++ ++ Sbjct 298 TLFAARHPL--IEAKIVVTNDIKF------DAGLNTIVITGPNTGGKTITLKTVGLLTIL 349 Query 380 AKAGL-FVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILL 438 A++GL ++ D + I +++IF ++GD Q+ E+ LSTFS H+ I I QA+E SL+L Sbjct 350 AQSGLPILAADGSRIHLFDDIFADIGDEQSIEQSLSTFSSHMTNIVHILAQADENSLVLF 409 Query 439 DEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHK 498 DE GTDP G A+A + LE + + +TH+ LK R N SMEF K Sbjct 410 DELGAGTDPKEGAALAIAILENLRERNVKTMASTHYPELKAYGVETQRVINASMEFNIDK 469 Query 499 LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIEIN 558 + PTY L G+PG+S A+E++ R+GL II A + ++++L+ K E+ Sbjct 470 MQPTYHLQLGVPGRSNALEISRRLGLPETIISVASQQISDSEHDVNQMIEKLEEKTREVI 529 Query 559 EELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNAFENRLEIRERQF 618 E S +N K+ +E L K L N++ RER+F Sbjct 530 E-----------------SSRNIKK---------IERENQSLHKDLTKVYNQIN-REREF 562 Query 619 EKQKETLLREIHEISHKETIE 639 E +K +E E+ K ++E Sbjct 563 ELEKAQ--KEAQEVVKKASLE 581 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus sanguinis SK36] Sequence ID: A3CKV4.1 Length: 777 Range 1: 6 to 561 Score:229 bits(585), Expect:2e-62, Method:Compositional matrix adjust., Identities:188/594(32%), Positives:307/594(51%), Gaps:63/594(10%) Query 20 LTRLEWNKITQYLAGF-----------ATFPHSKKTFSELEPWLELEDRNFFFT-----A 63 L LE++KI + A + P SKK + + +LE+ D F + Sbjct 6 LETLEFSKIKELFAPYLLTEQGQLELGLLLPTSKKE-TVVSAFLEMTDMQQIFVQHPHFS 64 Query 64 TSEMLDLNTETNGISLESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEK 123 + D+ T + LES D + + FL AL ++L + ++SF YE Sbjct 65 LAATQDITALTKRLELES-DLNI-EEFL---------ALKRVL---AVTQELKSF--YED 108 Query 124 SRATKYPNLFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVE 183 L L ++L +L L ++V+ G I S AS L R +++ + ++ E Sbjct 109 LENVHLEKLDRLFDNLAVFPKLQGSL-QAVNDGGFIESFASESLSRIRRKIQENENQVRE 167 Query 184 QLDEILKKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQAL 243 L EILK + L D V R+G VLP++ ++ I G+ +S SG+TV+IEP+A+ Sbjct 168 ILQEILKNKG--EMLADQVVASRNGRNVLPVKNTYRNRISGVVHDISASGNTVYIEPRAV 225 Query 244 AMQQAQLEKAQNDVEVEEQRILRELSKDCYLVHE-DILSSSEILTQFDNIIARTKFAGVI 302 ++ ++ D E QRIL+ELS D + H +I +++ I+ D + A+ +F Sbjct 226 VNLNEEIASSRADERYEIQRILQELS-DLFRPHAAEIANNAWIIGHLDLVRAKVRFMQET 284 Query 303 HGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPN 362 + P+ + +D+ L++ +HPL +EN +ANDLH V++GPN Sbjct 285 GAVVPDLSEEQDIQ----LLSVRHPL--IEN--AVANDLHFG------LDLTEIVITGPN 330 Query 363 AGGKTVAMKTVGIIALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLA 421 GGKT+ +KT+G+ +MA++GL + DK + + + IF ++GD Q+ E+ LSTFS H+ Sbjct 331 TGGKTIMLKTLGLAQIMAQSGLPILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMT 390 Query 422 QIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLA 481 I I EQ + SL+LLDE GTDP G A+A + LE +++ + TTH+ LK Sbjct 391 NIVSILEQVDSESLVLLDELGAGTDPQEGAALAIAILEDLRLRQIKTMATTHYPELKAYG 450 Query 482 DNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESE 541 N SMEF+ L PTY+ + G+PG+S A E+A+R+GL+ I+ A+ ++S+ Sbjct 451 IETDWVENASMEFDTDSLRPTYRFMQGVPGRSNAFEIAQRLGLSEVIVGHAQEQTDTDSD 510 Query 542 --RMENLLKELQL---KRIEINEELTKQNLLTQKLDSEFKSLKNE--KEQLSEL 588 R+ L+E L KR++ E+ ++NL K + K L NE +E+ +EL Sbjct 511 VNRIIERLEEQTLESRKRLDNIREVEQENL---KFNRALKKLYNEFNREKETEL 561 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Sulfurihydrogenibium sp. YO3AOP1] Sequence ID: B2V693.1 Length: 763 Range 1: 1 to 611 Score:228 bits(581), Expect:5e-62, Method:Compositional matrix adjust., Identities:180/638(28%), Positives:313/638(49%), Gaps:44/638(6%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFF---FTATSEMLDLN 71 +R+ L LE+ K L+ + +K + L+P + +R F SE + Sbjct 1 MRERDLESLEYRKFLNLLSSYTHNEITKNKINNLKP---ITNREFLEREIAKASEFESIF 57 Query 72 TETNGISLESF-DFTLFQNFLQ-RGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKY 129 + L F D T N + ++LSP+ +++I L++ +++SF K Sbjct 58 LKEGYFPLSEFPDITQAINLAKVEDSILSPKEIFEIGEILRVVKNVKSFLSNHTLNHLK- 116 Query 130 PNLFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEIL 189 L +L P EL + S+D D + SAS +L R ++ ++ I QL++IL Sbjct 117 ----KLFQNLTPLRELEKFITDSIDSDFAVKDSASKDLARIRKEIKEVEKLINNQLEKIL 172 Query 190 KKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQ 249 + ++A+Q+ + LR +V+P++ + I+GI + S SG+TV++EP + + Sbjct 173 NNPNYQDAIQEKLITLRRDRFVIPVKYNFSHRIKGIIQDRSSSGNTVYVEPFEVVPLNNK 232 Query 250 LEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEF 309 L + +E ++ILR L+ I +S + L +FD + + KF+ + P+ Sbjct 233 LTDLKLQENLEIRKILRFLTDIIRTKINFISNSFDALIEFDILYTKAKFSKAFNCRFPQ- 291 Query 310 LKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVA 369 + + L NAKHP+FLL+ K I D+ L K V++GPN GGKTVA Sbjct 292 -----IGESYQLYNAKHPIFLLKEKPFIPIDILLDEKRG-------LVITGPNTGGKTVA 339 Query 370 MKTVGIIALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISE 428 +KT G+++L+ ++ + + D+ ++I + IF+++GD Q+ EE+LST+S H+ I+ + + Sbjct 340 LKTAGLLSLIFQSAIAIPVDEGSKIPIFNGIFIDIGDYQSIEENLSTYSAHIKNIREMLD 399 Query 429 QANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFF 488 AN+ SL+L DE GTDP A+ + L+Y K VI TTH +K N+ F Sbjct 400 LANKNSLLLFDELIPGTDPDFASAIGIAILDYVKEKNIRVIATTHLKKIKAYVLNNDYFK 459 Query 489 NGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLK 548 ++ F+ L PTYK+ G+S A +A+++ L II+KA++ + E L Sbjct 460 IAAVGFDKETLTPTYKIYYNAVGESMAFYIAQKLNLQKEIIEKAKSLISKDLLNFEELAS 519 Query 549 ELQLKRIEINEELTKQNLLTQKLDSEFKSLKNEKEQLSELRG-----------DLVENYR 597 + E E++ + N L Q+L+ E +N +QL + + D VE R Sbjct 520 KFSALISEYEEKIKEINQLKQQLELEKAKYENLAKQLEKDKKEKWKESLKEIQDFVEKIR 579 Query 598 NKLQKRLNAFENRLEIRERQFEKQKETLLREIHEISHK 635 + +E E++ERQ E ++E I+ K Sbjct 580 QE------GYEVLKEVKERQSGAPLEKFVKEKKNINIK 611 Range 2: 634 to 763 Score:63.2 bits(152), Expect:9e-09, Method:Compositional matrix adjust., Identities:45/158(28%), Positives:83/158(52%), Gaps:28/158(17%) Query 794 EKGVVLKTADSKGNIECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNF 853 ++G V+ + K N+ FG +KI +P ++L + PK+ ++ + +TK+ Sbjct 634 QEGTVIAIREDKANV--NFGGIKIWLPLNQL---EKRQPKEEKTTFK--------ITKS- 679 Query 854 KKYHNLQDSEIPPTLQHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMG 913 ++I P+ I L+G T +E++ +L+ +DK+ IIHG+G G Sbjct 680 -------KTDITPS-------INLIGKTKEEAIKELEKYIDKVILEGYTTFKIIHGYGAG 725 Query 914 KIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEFDE 951 ++ +VR +L+ +KL++ + EGG GVTIV F+E Sbjct 726 VLRNAVREYLDKLPFKLKYEDAPYHEGGLGVTIVRFEE 763 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus pyogenes str. Manfredo] Sequence ID: A2RCQ8.1 Length: 779 Range 1: 6 to 552 Score:228 bits(581), Expect:6e-62, Method:Compositional matrix adjust., Identities:177/573(31%), Positives:293/573(51%), Gaps:37/573(6%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNG--- 76 L +LE+NK+ + L + S++ ELEP E F S+M + E + Sbjct 6 LEQLEFNKVKELLLPYLKTEQSQEELLELEPMTEASKIEKSFNEISDMEQIFVEHHSFGI 65 Query 77 ISLESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLS 136 +SL S +L + L+ A L+ Q L I L+ + F Y + +L L Sbjct 66 VSLSSISESLKR--LELSADLNIQELLAIKKVLQSSSDMIHF--YSDLDNVSFQSLDRLF 121 Query 137 NDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRN 196 +L+ L ++++ G + ASPEL R +L +++R++ + L ++LK++ Sbjct 122 ENLEQFPNLQGSF-QAINDGGFLEHFASPELERIRRQLTNSERRVRQILQDMLKEK--AE 178 Query 197 ALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQND 256 L +++ R G VLP++ ++ I G+ +S SGSTV+IEP+A+ ++ + + D Sbjct 179 LLSENLIASRSGRSVLPVKNTYRNRISGVVHDISSSGSTVYIEPRAVVTLNEEITQLRAD 238 Query 257 VEVEEQRILRELSKDCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDL 315 EE RIL S D H I +++ IL D + A+ F P+ L Sbjct 239 ERHEEGRILHAFS-DLLRPHVATIRNNAWILGHLDFVRAKYLFMSDNKATIPKISNDSTL 297 Query 316 NPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGI 375 +LIN +HPL +ANDLH + V++GPN GGKT+ +KT+G+ Sbjct 298 ----ALINVRHPLL----SNPVANDLHF------DHDLTAIVITGPNTGGKTIMLKTLGL 343 Query 376 IALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELS 434 LM ++GL V DK ++I + NIF ++GD Q+ E+ LSTFS H+ I I +A+ S Sbjct 344 AQLMGQSGLPVLADKGSKIAVFNNIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNS 403 Query 435 LILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEF 494 L+L DE GTDP G ++A + LE+ + + TTH+ LK + N SMEF Sbjct 404 LVLFDELGAGTDPQEGASLAMAILEHLRLSHIKTMATTHYPELKAYGIETNFVENASMEF 463 Query 495 EPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKR 554 + L PTY+ + G+PG+S A E+A R+GL I+++A+ S+S+ + ++++L+ + Sbjct 464 DAETLSPTYRFMQGVPGRSNAFEIASRLGLAPFIVKQAKQMTDSDSD-VNRIIEQLEAQT 522 Query 555 IEIN------EELTKQNLLTQKLDSEFKSLKNE 581 +E +E+ ++NL K + K L NE Sbjct 523 LETRRRLDHIKEVEQENL---KFNRAVKKLYNE 552 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus pyogenes MGAS8232] Sequence ID: Q8NZI5.1 Length: 779 Range 1: 6 to 552 Score:228 bits(580), Expect:9e-62, Method:Compositional matrix adjust., Identities:177/573(31%), Positives:293/573(51%), Gaps:37/573(6%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNG--- 76 L +LE+NK+ + L + S++ ELEP E F S+M + E + Sbjct 6 LEQLEFNKVKELLLPYLKTEQSQEELLELEPMTEAPKIEKSFNEISDMEQIFVEHHSFGI 65 Query 77 ISLESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLS 136 +SL S +L + L+ A L+ Q L I L+ + F Y + +L L Sbjct 66 VSLSSISESLKR--LELSADLNIQELLAIKKVLQSSSDMIHF--YSDLDNVSFQSLDRLF 121 Query 137 NDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRN 196 +L+ L ++++ G + ASPEL R +L +++R++ + L ++LK++ Sbjct 122 ENLEQFPNLQGSF-QAINDGGFLEHFASPELERIRRQLTNSERRVRQILQDMLKEK--AE 178 Query 197 ALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQND 256 L +++ R G VLP++ ++ I G+ +S SGSTV+IEP+A+ ++ + + D Sbjct 179 LLSENLIASRSGRSVLPVKNTYRNRISGVVHDISSSGSTVYIEPRAVVTLNEEITQLRAD 238 Query 257 VEVEEQRILRELSKDCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDL 315 EE RIL S D H I +++ IL D + A+ F P+ L Sbjct 239 ERHEEGRILHAFS-DLLRPHVATIRNNAWILGHLDLVRAKYLFMSDNKATIPKISNDSTL 297 Query 316 NPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGI 375 +LIN +HPL +ANDLH + V++GPN GGKT+ +KT+G+ Sbjct 298 ----ALINVRHPLL----SNPVANDLHF------DHDLTAIVITGPNTGGKTIMLKTLGL 343 Query 376 IALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELS 434 LM ++GL V DK ++I + NIF ++GD Q+ E+ LSTFS H+ I I +A+ S Sbjct 344 AQLMGQSGLPVLADKGSKIAVFNNIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNS 403 Query 435 LILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEF 494 L+L DE GTDP G ++A + LE+ + + TTH+ LK + N SMEF Sbjct 404 LVLFDELGAGTDPQEGASLAMAILEHLRLSHIKTMATTHYPELKAYGIETNFVENASMEF 463 Query 495 EPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKR 554 + L PTY+ + G+PG+S A E+A R+GL I+++A+ S+S+ + ++++L+ + Sbjct 464 DAETLSPTYRFMQGVPGRSNAFEIASRLGLAPFIVKQAKQMTDSDSD-VNRIIEQLEAQT 522 Query 555 IEIN------EELTKQNLLTQKLDSEFKSLKNE 581 +E +E+ ++NL K + K L NE Sbjct 523 LETRRRLDHIKEVEQENL---KFNRAVKKLYNE 552 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus pyogenes serotype M1] Sequence ID: Q99Y73.1 Length: 779 Range 1: 6 to 552 Score:228 bits(580), Expect:1e-61, Method:Compositional matrix adjust., Identities:177/577(31%), Positives:291/577(50%), Gaps:45/577(7%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISL 79 L +LE+NK+ + L + S++ ELEP E F S+M + E + + Sbjct 6 LEQLEFNKVKELLLPYLKTEQSQEELLELEPMTEAPKIEKSFNEISDMEQIFVEHHSFGI 65 Query 80 ESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLS--- 136 S + L+R L + + ++L K+ S + Y +L N+S Sbjct 66 VSL--SSISESLKRLELSTDLNIQELLAIKKVLQSSSDMIHF-------YSDLDNVSFQS 116 Query 137 -NDLKPHMELHAKLNKSVDM--DGNILSS-ASPELHSARSRLEHAKRKIVEQLDEILKKQ 192 + L ++E L S DG L ASPEL R +L +++R++ + L ++LK++ Sbjct 117 LDRLFENLEQFPNLQGSFQAINDGGFLEHFASPELERIRRQLTNSERRVRQILQDMLKEK 176 Query 193 DIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEK 252 L +++ R G VLP++ ++ I G+ +S SGSTV+IEP+A+ ++ + Sbjct 177 --AELLSENLIASRSGRSVLPVKNTYRNRISGVVHDISSSGSTVYIEPRAVVTLNEEITQ 234 Query 253 AQNDVEVEEQRILRELSKDCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLK 311 + D EE RIL S D H I +++ IL D + A+ F P+ Sbjct 235 LRADERHEEGRILHAFS-DLLRPHVATIRNNAWILGHLDFVRAKYLFMSDNKATIPKISN 293 Query 312 PRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMK 371 L +LIN +HPL +ANDLH + V++GPN GGKT+ +K Sbjct 294 DSTL----ALINVRHPLL----SNPVANDLHF------DHDLTAIVITGPNTGGKTIMLK 339 Query 372 TVGIIALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQA 430 T+G+ LM ++GL V DK ++I + NIF ++GD Q+ E+ LSTFS H+ I I +A Sbjct 340 TLGLAQLMGQSGLPVLADKGSKIAVFNNIFADIGDEQSIEQSLSTFSSHMTHIVSILNEA 399 Query 431 NELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNG 490 + SL+L DE GTDP G ++A + LE+ + + TTH+ LK + N Sbjct 400 DHNSLVLFDELGAGTDPQEGASLAMAILEHLRLSHIKTMATTHYPELKAYGIETNFVENA 459 Query 491 SMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKEL 550 SMEF+ L PTY+ + G+PG+S A E+A R+GL I+++A+ S+S+ + ++++L Sbjct 460 SMEFDAETLSPTYRFMQGVPGRSNAFEIASRLGLAPFIVKQAKQMTDSDSD-VNRIIEQL 518 Query 551 QLKRIEIN------EELTKQNLLTQKLDSEFKSLKNE 581 + + +E +E+ ++NL K + K L NE Sbjct 519 EAQTLETRRRLDHIKEVEQENL---KFNRAVKKLYNE 552 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus gordonii str. Challis substr. CH1] Sequence ID: A8AUW9.1 Length: 777 Range 1: 6 to 561 Score:228 bits(580), Expect:1e-61, Method:Compositional matrix adjust., Identities:177/580(31%), Positives:288/580(49%), Gaps:35/580(6%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISL 79 L LE+NKI G K L+P + E F ++M + E L Sbjct 6 LETLEFNKIKDLFQGSLQTEQGKLELQVLQPTTKKEAIERAFLEVTDMEQILVEDPHFHL 65 Query 80 ESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFK-YEKSRATKYPNLFNLSN 137 + D T L+ L+ + L + L++ H + +F+ E R + +F Sbjct 66 AATKDITAISKRLELDGDLNIEELLVLKKVLRVSHDLVTFYNDLENVRLQELNRIFE--- 122 Query 138 DLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNA 197 +L + L +V+ G I S AS EL R +++ + K+ + L EILK + + Sbjct 123 NLVDFPAIQGSL-LAVNDGGFIESFASEELGRIRRKIQENESKVRDLLQEILKNKG--DM 179 Query 198 LQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDV 257 L D V R+G VLP++ ++ I G+ +S SG+T++IEP+A+ ++ + D Sbjct 180 LADQVVASRNGRNVLPVKNTYRNRIPGVVHDISASGTTIYIEPRAVVNLNEEISNYKADE 239 Query 258 EVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNP 317 E RIL+ELS +I +++ I+ D ++A+ F + P + + Sbjct 240 RYELLRILQELSAMIRPHAAEIANNAWIIGHLDLVMAKLAFMRERGAVVPAISDTQAI-- 297 Query 318 RFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIA 377 L+ +HPL + +ANDLH P V++GPN GGKT+ +KT+G+ Sbjct 298 --QLLQVRHPLI----QNAVANDLHFGPDLTE------IVITGPNTGGKTIMLKTLGLAQ 345 Query 378 LMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLI 436 +MA++GL + DK + + + IF ++GD Q+ E+ LSTFS H+ I I EQ + SL+ Sbjct 346 IMAQSGLPILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLV 405 Query 437 LLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEP 496 LLDE GTDP G A+A + LE +++ + TTH+ LK N SMEF+ Sbjct 406 LLDELGAGTDPQEGAALAIAILEDLRLRQIKTMATTHYPELKAYGIETDWVENASMEFDT 465 Query 497 HKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSES------ERMENLLKEL 550 L PTY+ + G+PG+S A E+A R+GL+ I+ A+ ++S ER+E E Sbjct 466 DSLRPTYRFMQGVPGRSNAFEIARRLGLSEVIVSHAQEQTNTDSDVNQIIERLEEQTLES 525 Query 551 QLKRIEINEELTKQNLLTQKLDSEFKSLKNE--KEQLSEL 588 + KR++ E+ ++NL K + K L NE +E+ +EL Sbjct 526 R-KRLDNIREVEQENL---KFNRALKKLYNEFNREKETEL 561 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus pyogenes NZ131] Sequence ID: B5XI46.1 Length: 779 Range 1: 6 to 552 Score:225 bits(574), Expect:5e-61, Method:Compositional matrix adjust., Identities:176/573(31%), Positives:292/573(50%), Gaps:37/573(6%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNG--- 76 L +LE+NK+ + L + S++ ELEP E F S+M + E + Sbjct 6 LEQLEFNKVKELLLPYLKTEQSQEELLELEPMTEAPKIEKSFNEISDMEQIFVEHHSFGI 65 Query 77 ISLESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLS 136 +SL S +L + L+ A L+ Q L I L+ + F Y + +L L Sbjct 66 VSLSSISESLKR--LELSADLNIQELLAIKKVLQSSSDMIHF--YSDLNNISFQSLDRLF 121 Query 137 NDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRN 196 +L+ L ++++ G + ASPEL R +L +++R++ + L ++LK++ Sbjct 122 ENLEQFPNLQGSF-QAINDGGFLEHFASPELERIRRQLTNSERRVRQILQDMLKEK--AE 178 Query 197 ALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQND 256 L +++ R G VLP++ ++ I G+ +S SG+TV+IEP+A+ ++ + + D Sbjct 179 LLSENLIASRSGRSVLPVKNTYRNRISGVVHDISSSGTTVYIEPRAVVTLNEEITQLRAD 238 Query 257 VEVEEQRILRELSKDCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDL 315 EE RIL S D H I +++ IL D + A+ F P+ L Sbjct 239 ERHEEGRILHAFS-DLLRPHVATIRNNAWILGHLDFVRAKYLFMSDNKATIPKISNDSTL 297 Query 316 NPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGI 375 LIN +HPL +ANDLH + V++GPN GGKT+ +KT+G+ Sbjct 298 ----VLINVRHPLL----SNPVANDLHF------DHDLTAIVITGPNTGGKTIMLKTLGL 343 Query 376 IALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELS 434 LM ++GL V DK ++I + NIF ++GD Q+ E+ LSTFS H+ I I +A+ S Sbjct 344 AQLMGQSGLPVLADKGSKITVFNNIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADRNS 403 Query 435 LILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEF 494 L+L DE GTDP G ++A + LE+ + + TTH+ LK + N SMEF Sbjct 404 LVLFDELGAGTDPQEGASLAMAILEHLRLSHIKTMATTHYPELKAYGIETNFVENASMEF 463 Query 495 EPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKR 554 + L PTY+ + G+PG+S A E+A R+GL I+++A+ S+S+ + ++++L+ + Sbjct 464 DAETLSPTYRFMQGVPGRSNAFEIASRLGLAPFIVKQAKQMTDSDSD-VNRIIEQLEAQT 522 Query 555 IEIN------EELTKQNLLTQKLDSEFKSLKNE 581 +E +E+ ++NL K + K L NE Sbjct 523 LETRRRLDHIKEVEQENL---KFNRAVKKLYNE 552 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Lactococcus cremoris subsp. cremoris SK11] Sequence ID: Q02XM1.1 Length: 776 Range 1: 9 to 581 Score:224 bits(572), Expect:9e-61, Method:Compositional matrix adjust., Identities:181/622(29%), Positives:315/622(50%), Gaps:54/622(8%) Query 23 LEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISL-ES 81 LE++K+ + T +K S+L P + + F ++ L E ++L ++ Sbjct 9 LEYDKVKEQFMNALTTAQGQKELSDLVPLTDKDKIQLLFDEVADFRLLTQENGLLNLGKT 68 Query 82 FDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDLKP 141 D T L+ A LS + +I ++L +IQ FF +++ + P+L N++ L+ Sbjct 69 NDLTEILRRLELEASLSGKEFVEIKKVIQLGINIQRFF--DEAENVETPSL-NIT--LEK 123 Query 142 HMELHAKLNK--SVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQ 199 ++L + K D G++ +AS EL RS ++ + +I + + E+L K +L Sbjct 124 LVDLSGLIKKLEIFDNAGSLYDNASLELMHIRSSIKSHQSEIRKIMQEMLTKN--LASLS 181 Query 200 DDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEV 259 ++V +R+ VLP++A+ K+ I G+ +S SG T++IEP A+ +L + + + Sbjct 182 ENVITIRNDRQVLPVKAENKNKIAGVVHDMSASGQTLYIEPNAVVSLNNKLNQKRIEERQ 241 Query 260 EEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRF 319 E RI REL+++ DI ++ ++ D + A+ + P +D+ Sbjct 242 EITRIYRELAEELKPYSFDIRQNAWLIGHIDFVRAKYLYLAANKASLPALTNDKDI---- 297 Query 320 SLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALM 379 L A+HPL ++ K +AND+ + + V++GPN GGKT+ +KTVG++ ++ Sbjct 298 ILFAARHPL--IDAKMVVANDIKF------DRTLNTIVITGPNTGGKTITLKTVGLLTIL 349 Query 380 AKAGL-FVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILL 438 A++GL ++ D + I +++IF ++GD Q+ E+ LSTFS H+ I +I QA+E SL+L Sbjct 350 AQSGLPILADDGSRIHLFDDIFADIGDEQSIEQSLSTFSSHMTNIVQILAQADENSLVLF 409 Query 439 DEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHK 498 DE GTDP G A+A + LE + + +TH+ LK + N SMEF K Sbjct 410 DELGAGTDPKEGAALAIAILENLRKRNVKTMASTHYPELKAYGVKTQQVINASMEFNIDK 469 Query 499 LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKA-RTYYGSESERMENLLKELQLKRIEI 557 + PTY L G+PG+S A+E++ R+GL II +A + GSE ++ Sbjct 470 MQPTYHLQLGVPGRSNALEISRRLGLPETIISEAGQQISGSEH---------------DV 514 Query 558 NEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNAFENRLEIRERQ 617 N+ + K L +K +S +N K+ +E L K L N++ RER Sbjct 515 NQMIEK---LEEKTREVIESSRNIKK---------IERENQSLHKDLTKVYNQIN-RERD 561 Query 618 FEKQKETLLREIHEISHKETIE 639 FE +K +E E+ K ++E Sbjct 562 FELEKAQ--KEAQEVVKKASLE 581 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Lactococcus cremoris subsp. cremoris MG1363] Sequence ID: A2RJC8.1 Length: 776 Range 1: 9 to 581 Score:224 bits(570), Expect:2e-60, Method:Compositional matrix adjust., Identities:181/621(29%), Positives:316/621(50%), Gaps:52/621(8%) Query 23 LEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISL-ES 81 LE++K+ + T +K S+L P + + F ++ L E ++L ++ Sbjct 9 LEYDKVKEQFMNALTTAQGQKELSDLVPLTDKDKIQLLFDEVADFRLLTQENGLLNLGKT 68 Query 82 FDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDLKP 141 D T L+ A LS + +I ++L +IQ FF +++ + P+L N++ L+ Sbjct 69 NDLTEILRRLELEASLSGKEFVEIKKVIQLGINIQRFF--DEAENVETPSL-NIT--LEK 123 Query 142 HMELHAKLNK--SVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQ 199 ++L + K D G++ +AS EL R+ ++ + +I + + E+L K ++L Sbjct 124 LVDLSGLIKKLEIFDNAGSLYDNASLELMHIRASIKSHQSEIRKIMQEMLTKN--LSSLS 181 Query 200 DDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEV 259 ++V +R+ VLP++A+ K+ I G+ +S SG T++IEP A+ +L + + + Sbjct 182 ENVITIRNDRQVLPVKAENKNKIAGVVHDMSASGQTLYIEPNAVVSLNNKLNQKRIEERQ 241 Query 260 EEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRF 319 E RI REL+++ DI ++ ++ D + A+ + P +D+ Sbjct 242 EITRIYRELAEELKPYSFDIRQNAWLIGHIDFVRAKYLYLTANKASLPALTNDKDI---- 297 Query 320 SLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALM 379 L A+HPL ++ K +AND+ + + V++GPN GGKT+ +KTVG++ ++ Sbjct 298 ILFAARHPL--IDAKMVVANDIKF------DKTLNTIVITGPNTGGKTITLKTVGLLTIL 349 Query 380 AKAGL-FVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILL 438 A++GL ++ D + I +++IF ++GD Q+ E+ LSTFS H+ I +I QA+E SL+L Sbjct 350 AQSGLPILAEDGSRIHLFDDIFADIGDEQSIEQSLSTFSSHMTNIVQILAQADENSLVLF 409 Query 439 DEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHK 498 DE GTDP G A+A + LE + + +TH+ LK + N SMEF K Sbjct 410 DELGAGTDPKEGAALAIAILENLRKRNVKTMASTHYPELKAYGVETQQVINASMEFNIDK 469 Query 499 LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIEIN 558 + PTY L G+PG+S A+E++ R+GL II +A SESE ++N Sbjct 470 MQPTYHLQLGVPGRSNALEISRRLGLPETIISEAGQQI-SESEH-------------DVN 515 Query 559 EELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNAFENRLEIRERQF 618 + + K L +K +S +N K+ +E L K L N++ RER F Sbjct 516 QMIEK---LEEKTREVIESSRNIKK---------IERENQSLHKDLTKVYNQIN-RERDF 562 Query 619 EKQKETLLREIHEISHKETIE 639 E +K +E E+ K ++E Sbjct 563 ELEKAQ--KEAQEVVKKASLE 581 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Gemmatimonas aurantiaca T-27] Sequence ID: C1A4A9.1 Length: 819 Range 1: 5 to 564 Score:223 bits(568), Expect:5e-60, Method:Compositional matrix adjust., Identities:162/590(27%), Positives:282/590(47%), Gaps:62/590(10%) Query 19 ALTRLEWNKITQYLAGFATFPHSKKTFSELEP-----WLELED---RNFFFTATSEM--- 67 AL LE++++ ++AG AT L P W+E E R SE+ Sbjct 5 ALGILEFSRLLAHVAGRATSAPGAAAVRALTPRTDREWIEAEHARVRAVRALVASELGWP 64 Query 68 ----LDLNTETNGISLESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEK 123 D+ + +E +T + L +GA L L+ ++ + + Sbjct 65 TEPIPDIGEPLRRLRIEGLSWTALE--LLQGATL-----------LRSSRRTRATLRDPR 111 Query 124 SRATKYPNLFNLSN---DLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRK 180 A L + DL+P + + +++ DG + ASP L R L + + Sbjct 112 RPAIMLAYLVRYAEALVDLEPREQ---AIERAIGDDGTVRDDASPTLRKVRRDLRETEGQ 168 Query 181 IVEQLDEILKKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEP 240 +V L+ + K + + + D +R+G +V+P+R + + + GI S +G+T+++EP Sbjct 169 LVRLLEREMGKLEAHHQVSDLSVTMRNGRWVMPMRREARGYVGGIVHDSSGTGATIYVEP 228 Query 241 QALAMQQAQLEKAQNDVEVEEQR----ILRELSKDCYLVHEDILSSSEILTQFDNIIART 296 A + ++E+EEQR +LR L+ + H+ I + + L D++ AR Sbjct 229 PA----AVEFGNRVRELEIEEQREVERVLRALTDEIRPYHDAIGGAYDALVALDSLYARA 284 Query 297 KFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVW 356 ++A F +P + F +++ +HPL L + DL L GE + V Sbjct 285 RYAIEAQCAPVTFGEP---SAGFRIVDGRHPLLLASGGAVVPFDLTL---HAGERTMLV- 337 Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC-DKAEIQDYENIFVELGDRQNREEDLST 415 SGPN GGKTV +K +G+I++MA+ G+ + +++ +++++ ++GD Q+ E LST Sbjct 338 --SGPNTGGKTVLLKAIGLISMMAQCGVPAPLGETSQLAVFDDLYADVGDEQSIEASLST 395 Query 416 FSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFS 475 FS HL + I A SL+L+DE GTDPA G A+ + LE + + + TTH Sbjct 396 FSAHLKNLGEILRSATTSSLVLIDELGSGTDPAEGAALGGAILETLTRRGTLTLATTHLG 455 Query 476 NLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY 535 LK LA + N S++F+ +L PTY+LL G+PG+SY + +A R+ ++ +IQ+A Sbjct 456 QLKLLATDVEGVVNASLQFDAVQLAPTYRLLKGVPGRSYGLSIARRLQIDEAVIQRAEER 515 Query 536 YGSESERMENLLKELQLKR---------IEINEELTKQNLLTQKLDSEFK 576 S M LL +++ + +EI++E + L T D E K Sbjct 516 LPSGERDMAVLLADVEAREALLADRERLMEIDQEKLRARLATVG-DRELK 564 Range 2: 744 to 818 Score:45.8 bits(107), Expect:0.002, Method:Compositional matrix adjust., Identities:27/75(36%), Positives:38/75(50%), Gaps:0/75(0%) Query 875 IQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRG 934 + + G VDE D++ LD R D+ + IIHG G G ++ V L+ + FR Sbjct 744 VDVRGLRVDEVDDQVLQALDAAVRNDLRELRIIHGKGTGALRSRVSEMLKKDTRVTGFRL 803 Query 935 GRHGEGGDGVTIVEF 949 G EGG GVT+ E Sbjct 804 GAWNEGGAGVTVAEL 818 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus equi subsp. equi 4047] Sequence ID: C0MAV6.1 Length: 778 Range 1: 6 to 552 Score:221 bits(562), Expect:2e-59, Method:Compositional matrix adjust., Identities:175/572(31%), Positives:281/572(49%), Gaps:35/572(6%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISL 79 L +LE+ K+ + + + LEP + +FT EM + E + +L Sbjct 6 LEQLEFEKVKEQFWPYLQTEQGQLELDLLEPIANKDKIQAYFTELEEMAAIFVEHHHFAL 65 Query 80 ESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSND 138 D + L A LS Q L + L++ + F Y L L Sbjct 66 GGLSDVSESMQRLDLEADLSIQELLAVKKLLQVSAEVCRF--YADLENVDLVALKALFEK 123 Query 139 LKPHMELHAKLNKSVDMDGNILSSASPELHSARSRL---EHAKRKIVEQLDEILKKQDIR 195 ++ L L ++++ G + ASPEL S R ++ EHA R++ L +ILKKQ Sbjct 124 IESFPSLQGSL-QAINDAGFVEGFASPELESIRRQISNKEHASRQL---LQDILKKQAAY 179 Query 196 NALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQN 255 L + + R+G VLP++ + + G+ +S SGSTV+IEP+AL +L + Q Sbjct 180 --LSESLIASRNGRSVLPVKNTYRHKVAGVVHDMSASGSTVYIEPRALVSLNEELTQLQT 237 Query 256 DVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDL 315 D E RIL ELS+ + +++ +L D + A+ + P + L Sbjct 238 DERHEIGRILHELSEQLRPHSRSLRNNAWLLGHLDLVRAKYLYMQAKQATVPVISDDKSL 297 Query 316 NPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGI 375 L+NA+HPL + +ANDLH A V V++GPN GGKT+ +KT+G+ Sbjct 298 Q----LLNARHPLI----QNPVANDLHFA------NDLAVIVITGPNTGGKTIMLKTLGL 343 Query 376 IALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELS 434 +MA++GL + DK + + + I+ ++GD Q+ E+ LSTFS H+ I I QA+ S Sbjct 344 AQVMAQSGLPILADKGSRVAVFNGIYADIGDEQSIEQSLSTFSSHMTHIVEILNQADSDS 403 Query 435 LILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEF 494 LIL DE GTDP G ++A + LE + + TTH+ LK + N SM F Sbjct 404 LILFDELGAGTDPQEGASLAMAILEQLRLTNIKTMATTHYPELKAYGIETAYVENASMAF 463 Query 495 EPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESE--RMENLLKELQL 552 + L PTY+ + G+PG+S A ++A R+GL +I+++A+ ++ + R+ L++ L Sbjct 464 DNVSLKPTYRFMQGVPGRSNAFDIARRLGLAEHIVKEAQAMTATDHDVNRIIEQLEQQTL 523 Query 553 ---KRIEINEELTKQNLLTQKLDSEFKSLKNE 581 KR+E +E+ + NL K + K L NE Sbjct 524 ESRKRLEHIKEVEQDNL---KFNRAVKKLYNE 552 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Lactobacillus acidophilus NCFM] Sequence ID: Q5FLW2.1 Length: 785 Range 1: 131 to 623 Score:221 bits(562), Expect:2e-59, Method:Compositional matrix adjust., Identities:164/525(31%), Positives:270/525(51%), Gaps:48/525(9%) Query 145 LHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWM 204 L +L KS+D DG +L +AS EL R + + I ++ K + L + + Sbjct 131 LFRELKKSIDYDGEVLDTASSELARLRHDIASNEEDIKNRMTTYTKGNSSK-YLSEQIVT 189 Query 205 LRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQA-LAMQQAQLEKAQNDVEVEEQR 263 +RD YV+P++ + ++ G+ S SG T+F+EP+A L + Q QN + E+Q Sbjct 190 IRDDRYVIPVKQEYRAKFGGVVHDQSASGQTLFVEPEAVLNLNNRQ----QNLIAKEKQE 245 Query 264 ILRELSKDCYLVHEDILSSSEI---LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFS 320 I L + EDI S + I LT D + A+ K A + +P+ K LN R Sbjct 246 IRNILKHLSNIAREDIDSLNNIASALTSLDFLQAKAKLAKEMKASEPKLTKDHSLNLR-- 303 Query 321 LINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMA 380 NA+HPL + +K + N++ L G+ +++GPN GGKT+ +KT G++ LMA Sbjct 304 --NARHPL--INPEKVVPNNIRLG----GDFD--TMLITGPNTGGKTITLKTAGLLQLMA 353 Query 381 KAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLD 439 ++GLF+ ++ +++ +E I+ ++GD Q+ E+ LSTFS H+ I I + N +L+L+D Sbjct 354 QSGLFIPAEEDSQVGVFEQIYADIGDEQSIEQSLSTFSSHMNDIIAIMKNVNSETLVLID 413 Query 440 EGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKL 499 E GTDP G ++A S L++ K A +++TTH+ LK N R N SMEF+ L Sbjct 414 EIGAGTDPEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGYNRPRTTNASMEFDLKTL 473 Query 500 LPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIEINE 559 PTY+L GIPG S A +A R+G+ ++++ A+ E + ++ +L + Sbjct 474 SPTYRLQIGIPGHSNAFAIARRLGMREDVVKNAQELMSDEDSDINKMIAKLN---AQTKA 530 Query 560 ELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNAFENRLE--IRER- 616 T +N L LD ++L + ++ Y ++QK+L+ + R I +R Sbjct 531 ATTARNRLETSLD--------RSQKLEQKLQQALDWYNQRVQKQLDFAQERANEIIAKRR 582 Query 617 --------QFEKQKETLLREIHEISHKETIENNLEISQAQQNNLS 653 Q E+QK ++E I K + N+LE Q NNL+ Sbjct 583 KKADKIIEQLEQQKNVGIKENKIIEAKGEL-NSLE---RQANNLA 623 Range 2: 666 to 784 Score:52.4 bits(124), Expect:2e-05, Method:Compositional matrix adjust., Identities:34/119(29%), Positives:56/119(47%), Gaps:9/119(7%) Query 840 QKSSLNVKPLTKNFKKYHNLQDSEIPPTLQHGGNTIQ---------LLGCTVDESLDKLD 890 Q + VK ++ ++ N Q + P L + ++ L G DE++ LD Sbjct 666 QMGIIKVKVSDRDVERIDNSQSTAKPKRLVRATSAVRRSNAHSELDLRGQRYDEAMTNLD 725 Query 891 IELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRGGRHGEGGDGVTIVEF 949 +D + +D V IIHG G G I++ V ++L S++ F EGG+G TIV+ Sbjct 726 RYIDSVLLAGLDTVTIIHGIGTGAIRKGVWQYLRSSNHVKNFNYAPANEGGNGATIVQL 784 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus suis 05ZYH33] Sequence ID: A4VSW4.1 Length: 778 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus suis 98HAH33] Sequence ID: A4VZ51.1 Length: 778 Range 1: 9 to 532 Score:220 bits(561), Expect:3e-59, Method:Compositional matrix adjust., Identities:161/552(29%), Positives:287/552(51%), Gaps:39/552(7%) Query 23 LEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISLESF 82 LE++K+ Q + + + +LEP +E+ F +++ + E SL + Sbjct 9 LEFHKVRQKIEPYLLTEQGFEELRQLEPMVEVHRIQQAFDELTDIAQIFVENPYFSLAAT 68 Query 83 -DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLS----- 136 D L+ L+ L + L++ S+ F Y NL N+S Sbjct 69 SDIGPAMRRLELDTDLNIAELLAVKKVLEVSKSLLDF----------YGNLENVSLSQQL 118 Query 137 NDLKPHMELHAKLN---KSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQD 193 + L +EL L +S++ G + AS +L R ++ A+ ++ + + +ILK + Sbjct 119 DKLFEKIELFPHLQGSLQSINDAGFVEDFASEKLARIRRKIREAEDQVRQVMQDILKTKG 178 Query 194 IRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKA 253 + L D + R+G VLP++ ++ I G+ +S SGSTV+IEP+A+ ++ Sbjct 179 --DMLSDSILASRNGRNVLPVKNTYRNKIAGVVHDISASGSTVYIEPRAVVTLNEEISHL 236 Query 254 QNDVEVEEQRILRELSKDCYLVHEDIL-SSSEILTQFDNIIARTKFAGVIHGIKPEFLKP 312 + + E RIL+ELS D H ++ +++ ++ D + A+ FA + P+ + Sbjct 237 RAEERHELNRILQELS-DMLRPHGGVIRNNAWLIGHIDFVRAKHLFARDHQAVVPKLSEK 295 Query 313 RDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKT 372 +D+ +L+N +HPL K + NDL+ + V++GPN GGKT+ +KT Sbjct 296 QDI----ALLNVRHPLI----AKPVPNDLYFGSQLTA------IVITGPNTGGKTIMLKT 341 Query 373 VGIIALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQAN 431 +G+ LMA++GL + DK + + ++ IF ++GD Q+ E+ LSTFS H+ I A+ Sbjct 342 LGLTHLMAQSGLPILADKGSRVAIFKEIFADIGDEQSIEQSLSTFSSHMTHTVEILRAAD 401 Query 432 ELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGS 491 + SLIL DE GTDP G ++A + L+ ++ + TTH+ LK S N S Sbjct 402 QDSLILFDELGAGTDPQEGASLAMAILDDLRLRGIKTMATTHYPELKAYGIETSGIENAS 461 Query 492 MEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQ 551 MEF+ + L PTYK + G+PG+S A E+A R+GL++ IIQ A+++ ++S+ + ++++L+ Sbjct 462 MEFDSNSLRPTYKFMQGVPGRSNAFEIARRLGLSDIIIQSAQSWTDTDSD-VNRIIEKLE 520 Query 552 LKRIEINEELTK 563 + +E + L K Sbjct 521 SQTVESRQRLDK 532 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus equi subsp. zooepidemicus H70] Sequence ID: C0MEM8.1 Length: 778 Range 1: 6 to 552 Score:220 bits(561), Expect:3e-59, Method:Compositional matrix adjust., Identities:176/572(31%), Positives:281/572(49%), Gaps:35/572(6%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISL 79 L +LE+ K+ + + + LEP + +FT EM + E + +L Sbjct 6 LEQLEFEKVKEQFWPYLQTEQGQLELDLLEPIANKDKIQAYFTELEEMAAIFVEHHHFAL 65 Query 80 ESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSND 138 D + L A LS Q L I L++ + F Y L L Sbjct 66 GGLSDVSESMQRLDLEADLSIQELLVIKKLLQVSAEVCRF--YADLENVDLVALKALFEK 123 Query 139 LKPHMELHAKLNKSVDMDGNILSSASPELHSARSRL---EHAKRKIVEQLDEILKKQDIR 195 ++ L L ++++ G + ASPEL S R ++ EHA R++ L +ILKKQ Sbjct 124 IESFPSLQGSL-QAINDAGFVEGFASPELESIRRQISNKEHASRQL---LQDILKKQ--A 177 Query 196 NALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQN 255 L + + R+G VLP++ + + G+ +S SGSTV+IEP+AL +L + Q Sbjct 178 AYLSESLIASRNGRSVLPVKNTYRHKVAGVVHDMSASGSTVYIEPRALVSLNEELTQLQA 237 Query 256 DVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDL 315 D E RIL ELS+ + +++ +L D + A+ + P + L Sbjct 238 DERHEIGRILHELSEQLRPHSRSLRNNAWLLGHLDLVRAKYLYMQAKQATVPVISDDKSL 297 Query 316 NPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGI 375 L+NA+HPL + +ANDLH A V V++GPN GGKT+ +KT+G+ Sbjct 298 Q----LLNARHPLI----QNPVANDLHFA------NDLAVIVITGPNTGGKTIMLKTLGL 343 Query 376 IALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELS 434 +MA++GL + DK + + + I+ ++GD Q+ E+ LSTFS H+ I I QA+ S Sbjct 344 AQVMAQSGLPILADKGSRVAVFNGIYADIGDEQSIEQSLSTFSSHMTHIVEILNQADSDS 403 Query 435 LILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEF 494 LIL DE GTDP G ++A + LE + + TTH+ LK + N SM F Sbjct 404 LILFDELGAGTDPQEGASLAMAILEQLRLTNIKTMATTHYPELKAYGIETAYVENASMAF 463 Query 495 EPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESE--RMENLLKELQL 552 + L PTY+ + G+PG+S A ++A R+GL +I+++A+ ++ + R+ L++ L Sbjct 464 DNVSLKPTYRFMQGVPGRSNAFDIARRLGLAEHIVKEAQAMTATDHDVNRIIEQLEQQTL 523 Query 553 ---KRIEINEELTKQNLLTQKLDSEFKSLKNE 581 KR+E +E+ + NL K + K L NE Sbjct 524 ESRKRLEHIKEVEQDNL---KFNRAVKKLYNE 552 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus mutans UA159] Sequence ID: Q8DSD1.1 Length: 776 Range 1: 6 to 552 Score:220 bits(560), Expect:4e-59, Method:Compositional matrix adjust., Identities:175/584(30%), Positives:287/584(49%), Gaps:59/584(10%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISL 79 L LE++K+ + F + ++L P E F +++ + E Sbjct 6 LKALEFDKVKKQFTHFLQSEQGQMELNDLLPMTNQEKIERSFAEIADVAQIFQE-----Y 60 Query 80 ESFDFTLFQNF------LQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLF 133 SF F Q+ L+ GA L+ Q L + L++ ++ F Y+ L Sbjct 61 ASFGFGHSQDISESLRRLELGADLNTQELLAVKRILQMSAELKDF--YDNLENVDLQILD 118 Query 134 NLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQD 193 L ++ +L L ++++ G I ASPEL R + +++I + L E+LKKQ Sbjct 119 CLFEKIETFPDLQGSL-QAINDGGFIEDFASPELTKIRHHIHQNEQQIRQILQEMLKKQG 177 Query 194 IRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKA 253 + L +++ R G VLP++ + I G+ +S SG+TV+IEP+A+ ++ +A Sbjct 178 --DLLAENLIASRSGRSVLPVKNTYRHRIAGVIHDISASGNTVYIEPRAVVNLNEEMTQA 235 Query 254 QNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPR 313 + D E RIL +LS + +Q D I G I ++ ++L R Sbjct 236 RADERHEMTRILHDLS-------------DRLRSQTDIIGNNAWLLGHIDFVRGKYLYMR 282 Query 314 D---------LNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAG 364 + + L++ +HPL IANDLH E +++GPN G Sbjct 283 ENQASLPSLTTDQTIRLLSVRHPLL----SNPIANDLHF------EHDTTAILITGPNTG 332 Query 365 GKTVAMKTVGIIALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQI 423 GKT+ +KT+GI LMA++GL + D+ +++ +++IF ++GD Q+ E+ LSTFS H+ I Sbjct 333 GKTIMLKTLGITQLMAQSGLPILADEGSKVAVFKDIFADIGDEQSIEQSLSTFSSHMTHI 392 Query 424 KRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADN 483 I ++AN+ SL+L DE GTDP G A+A S LE+ + +ITTH+ LK Sbjct 393 VEILQKANKDSLVLFDELGAGTDPQEGAALAMSILEHLRLSDIKTMITTHYPELKAYGIE 452 Query 484 DSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSES--- 540 N SMEF+ L PTY + G+PG+S A E+A R+GL+ I+ +A ++S Sbjct 453 TEFIENASMEFDMVTLSPTYHFMQGVPGRSNAFEIARRLGLSEIIVAEAENLTNTDSDVN 512 Query 541 ---ERMENLLKELQLKRIEINEELTKQNLLTQKLDSEFKSLKNE 581 ER+EN E + +R++ E+ ++NL K + K L NE Sbjct 513 KIIERLENQTIESR-RRLDNIREVEQENL---KFNRAVKKLYNE 552 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus equi subsp. zooepidemicus MGCS10565] Sequence ID: B4U143.1 Length: 778 Range 1: 6 to 642 Score:220 bits(560), Expect:4e-59, Method:Compositional matrix adjust., Identities:200/676(30%), Positives:322/676(47%), Gaps:58/676(8%) Query 20 LTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTETNGISL 79 L +LE+ K+ + + + LEP + +FT EM + E + +L Sbjct 6 LEQLEFEKVKEQFWPYLQTEQGQLELDLLEPIANKDKIQAYFTELEEMAAIFVEHHHFAL 65 Query 80 ESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSND 138 D + L A LS Q L ++ L++ F Y L L Sbjct 66 GGLSDVSESMQRLDLEADLSIQELLEVKKLLQVSAEACRF--YADLENVDLVALKALFEK 123 Query 139 LKPHMELHAKLNKSVDMDGNILSSASPELHSARSRL---EHAKRKIVEQLDEILKKQDIR 195 ++ L L ++++ G + ASPEL S R ++ EHA R++ L +ILKKQ Sbjct 124 IESFPSLQGSL-QAINDAGFVEGFASPELESIRRQISNKEHASRQL---LQDILKKQAAY 179 Query 196 NALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQN 255 L + + R+G VLP++ + + G+ +S SGSTV+IEP+AL +L + Q Sbjct 180 --LSESLIASRNGRSVLPVKNTYRHKVAGVVHDMSASGSTVYIEPRALVSLNEELTQLQT 237 Query 256 DVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDL 315 D E RIL ELS+ + +++ +L D + A+ + P + L Sbjct 238 DERHEIGRILHELSEQLRPHSRSLRNNAWLLGHLDLVRAKYLYMQAKQAAVPVISDDKSL 297 Query 316 NPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGI 375 L+NA+HPL + +ANDLH A V V++GPN GGKT+ +KT+G+ Sbjct 298 Q----LLNARHPLI----QNPVANDLHFA------NDLAVIVITGPNTGGKTIMLKTLGL 343 Query 376 IALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELS 434 +MA++GL + DK + + + I+ ++GD Q+ E+ LSTFS H+ I I +QA+ S Sbjct 344 AQVMAQSGLPILADKGSRVAVFNGIYADIGDEQSIEQSLSTFSSHMTHIVEILKQADSDS 403 Query 435 LILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEF 494 LIL DE GTDP G ++A + LE + + TTH+ LK + N SM F Sbjct 404 LILFDELGAGTDPQEGASLAMAILEQLRLTNIKTMATTHYPELKAYGIETAYVENASMAF 463 Query 495 EPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESE--RMENLLKELQL 552 + L PTY+ + G+PG+S A ++A R+GL +I+++A+ + + R+ L++ L Sbjct 464 DNVSLKPTYRFMQGVPGRSNAFDIARRLGLAEHIVKEAQAMTATNHDVNRIIEQLEQQTL 523 Query 553 ---KRIEINEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNAFEN 609 KR+E +E+ + NL K + K L NE + +L+K A E Sbjct 524 ESRKRLEHIKEVEQDNL---KFNRAVKKLYNEFSHAKD----------KELEK--AALEA 568 Query 610 RLEIRERQFEKQKETLLREIH---EISHKETIENNLEISQ------AQQNNLSEKNQNKL 660 R EI + + E++L ++H E+ E IE + Q QN + +K + Sbjct 569 R-EIVDMAL-AESESILSQLHEKAELKPHEIIEAKHRLKQLVPEQSLSQNKVLKKAKKWR 626 Query 661 APAQKKEIINTAKPQK 676 AP +II TA Q+ Sbjct 627 APRVGDDIIVTAYGQR 642 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Aquifex aeolicus VF5] Sequence ID: O67287.1 Length: 762 Range 1: 1 to 560 Score:219 bits(558), Expect:7e-59, Method:Compositional matrix adjust., Identities:158/584(27%), Positives:285/584(48%), Gaps:25/584(4%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 +R+ L +LE++K+ + LA +A P +K+ L+P+ E + D+ Sbjct 1 MREKDLIKLEFDKVKEVLASYAHSPATKEKIQNLKPYTNKEKVKEEIELSKAFFDIAENV 60 Query 75 NGISLESFDFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFN 134 E L + LQ GA+L + + +IL + L I+ S + L Sbjct 61 RLFEFEDIRELLKKAKLQ-GAILGVEDILKILNVINLTKEIRRVLS---SHVQRLEPLRK 116 Query 135 LSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDI 194 + L L + S+D G + AS EL R + + +I ++LD ++ + D Sbjct 117 VYKKLYTFSPLENLIIGSIDPRGFVKDEASEELLRVRKSIRAVEEEIKKRLDNLINRPDS 176 Query 195 RNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQ 254 L D + +R+G YV+P++ I GI G S SG T ++EPQ + +L + + Sbjct 177 AKFLSDRIVTIRNGRYVIPVKTSHVKKIFGIVHGTSSSGYTTYVEPQFVIHLNNKLTELK 236 Query 255 NDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRD 314 E E +++L+ +++ +++L S E + D + +F+ ++ G P+F Sbjct 237 QKEEEEVRKVLQRITEYIGDYAKELLESFEACVEVDFQQCKYRFSKLVEGSFPDF----- 291 Query 315 LNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVG 374 L A+HP+ +L + + + L K +L+GPN GGKTVA+KT+G Sbjct 292 -GEWVELYEARHPVLVLVKEDVVPVGILLKEKKG-------LILTGPNTGGKTVALKTLG 343 Query 375 IIALMAKAGLFV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANEL 433 + LM ++ + V + +++ +E +F ++GD Q+ E++LSTFS H+ + +++E Sbjct 344 LSVLMFQSAIPVPASPNSKLPLFEKVFTDIGDEQSIEQNLSTFSAHVKNMAEFLPKSDEN 403 Query 434 SLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSME 493 +L+L+DE GTDP G A+ LEY KKA V +TTH + +K + N + S+ Sbjct 404 TLVLIDELGAGTDPIEGSALGIGILEYLKKKKAWVFVTTHHTPIKLYSTNSDYYTPASVL 463 Query 494 FEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLK 553 F+ L P YK+ G+S A +A++ G+ + +I+ A+ + G E+ +++L Sbjct 464 FDRETLKPLYKIAYNTVGESMAFYIAQKYGIPSEVIEIAKRHVGEFGEQYIKAMEKLSDY 523 Query 554 RIEINEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYR 597 + EE +KL+ K L+ EKE++ +LR + E R Sbjct 524 VKKYEEEF-------RKLEELRKELQKEKEEVEKLRKEYEEAKR 560 Range 2: 680 to 754 Score:46.6 bits(109), Expect:0.001, Method:Compositional matrix adjust., Identities:25/75(33%), Positives:42/75(56%), Gaps:0/75(0%) Query 873 NTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRF 932 +T+ L+G V+ ++ +L+ +++ + V +IHG G GK+K +VR L + F Sbjct 680 DTLNLIGKDVETAVRELEKFIEEAYSAGYKVVKVIHGIGSGKLKSAVREALSKNEKVKFF 739 Query 933 RGGRHGEGGDGVTIV 947 R EGG GVT+V Sbjct 740 RDAYPKEGGSGVTVV 754 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus uberis 0140J] Sequence ID: B9DVK7.1 Length: 777 Range 1: 1 to 560 Score:218 bits(554), Expect:2e-58, Method:Compositional matrix adjust., Identities:170/581(29%), Positives:290/581(49%), Gaps:33/581(5%) Query 15 LRQDALTRLEWNKITQYLAGFATFPHSKKTFSELEPWLELEDRNFFFTATSEMLDLNTET 74 + Q L +LE+ K+ + + + LEP + + +F +EM + E Sbjct 1 MNQKILEQLEFQKVKEQFQPYLQTAQGIQELRLLEPSNHYDKISDYFKEIAEMATIFVEN 60 Query 75 NGISLESF-DFTLFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLF 133 + S+ + D + L+ A L+ Q L I L + I F Y+ L Sbjct 61 HHFSIGNLRDVSESMRRLELEADLNIQELLDIKKLLLVSGEISRF--YQDLENVDLQVLK 118 Query 134 NLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQD 193 + ++ +L L ++V+ I + ASPEL R ++ +R + L +ILKK Sbjct 119 RIFEKIEVFPQLQGSL-QAVNDAAFIENFASPELDRLRRQIAENERYSRQLLQDILKKN- 176 Query 194 IRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKA 253 + L + + R+G VLP++ + + G+ +S SG+TV+IEP+AL ++ + Sbjct 177 -ADYLSESLIASRNGKSVLPVKNTFRHRVSGVVHDISASGNTVYIEPRALVQVNEEMTQL 235 Query 254 QNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPR 313 D E RIL+ELS+ + +++ +L D + A+ + P+ K + Sbjct 236 LADERHEIARILKELSQLLRPHSRALANNAWLLGHLDFVRAKYHYLVNNKATIPKISKDK 295 Query 314 DLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 ++ L+N +HPL K +ANDLH A V V++GPN GGKT+ +KT+ Sbjct 296 NIQ----LLNVRHPLL----KNPVANDLHFA------DDLAVIVITGPNTGGKTIMLKTL 341 Query 374 GIIALMAKAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANE 432 G+ LM ++GL + D+ ++I ++ I+ ++GD Q+ E+ LSTFS H+ I I E++N Sbjct 342 GLAQLMGQSGLPILADEGSKIAVFDAIYADIGDEQSIEQSLSTFSSHMTHIVDILEESNS 401 Query 433 LSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSM 492 SL+L DE GTDP G ++A + LE + + TTH+ LK N SM Sbjct 402 NSLVLFDELGAGTDPQEGASLAMAILEQLRLTNIKTMATTHYPELKAYGIESDYVENASM 461 Query 493 EFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQL 552 EF+ L PTY+ + G+PG+S A E+A R+GL I+++A ++S+ + +++EL+ Sbjct 462 EFDSQSLKPTYRFMQGVPGRSNAFEIARRLGLAETIVKEAEQMTDTDSD-VNRIIEELER 520 Query 553 KRI----------EINEELTKQNLLTQKLDSEFKSLKNEKE 583 + + E+ +E K N +KL +EF SL +KE Sbjct 521 QTLSSRRRLDHIREVEQENIKFNRAVKKLYNEF-SLAKDKE 560 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Lactobacillus helveticus DPC 4571] Sequence ID: A8YTJ4.1 Length: 785 Range 1: 132 to 622 Score:216 bits(551), Expect:8e-58, Method:Compositional matrix adjust., Identities:153/519(29%), Positives:268/519(51%), Gaps:33/519(6%) Query 145 LHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWM 204 L +L KSVD DG +L +AS L R + + I ++D K + L + + Sbjct 132 LFRELKKSVDYDGEVLDTASNALARLRHDMRSNEEDIKNRMDAYTKGNSSK-YLSEQIVT 190 Query 205 LRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQA-LAMQQAQLEKAQNDVEVEEQR 263 +RD YV+P++ + + G+ S SG T+FIEP+A L + Q QN + E+Q Sbjct 191 IRDDRYVIPVKQEYRGKFGGVVHDQSASGQTLFIEPEAVLNLNNRQ----QNLIAQEKQE 246 Query 264 ILRELSKDCYLVHEDILSSSEI---LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFS 320 I L L E+I S + I LT+ D + A+ K A + +P+ + L R Sbjct 247 IRNILKHLSSLAREEINSINNIANSLTRLDFLQAKAKLAKEMKASEPKLTQDHSLELR-- 304 Query 321 LINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMA 380 NA+HPL ++ +K + ND+ L G+ +++GPN GGKT+ +KT G++ LMA Sbjct 305 --NARHPL--IDPEKVVPNDIRLG----GDYD--TMLITGPNTGGKTITLKTAGLLQLMA 354 Query 381 KAGLFVSCDK-AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLD 439 ++GLF+ ++ +++ ++ ++ ++GD Q+ E+ LSTFS H+ I I + ++ +L+L+D Sbjct 355 QSGLFIPAEEGSKVGVFKEVYADIGDEQSIEQSLSTFSSHINDIIAIMKNVDKETLVLID 414 Query 440 EGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKL 499 E GTDP G ++A S L++ K A +++TTH+ LK N R N SMEF+ L Sbjct 415 EIGAGTDPEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGYNRPRTINASMEFDLKTL 474 Query 500 LPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIEINE 559 PTY L GIPG S A +A R+G+ ++++ A+ E + ++ +L + Sbjct 475 SPTYHLQIGIPGHSNAFAIARRLGMREDVVKNAQNLMADEDSDINKMIAKLN---AQTKA 531 Query 560 ELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNAFENRLEIRERQFE 619 T +N L LD ++L + ++ Y ++QK+L+ + R + Sbjct 532 ATTARNRLETSLD--------RSQKLEQKLQQALDWYNQRVQKQLDFAQERANEVVAKRR 583 Query 620 KQKETLLREIHEISHKETIENNLEISQAQQNNLSEKNQN 658 K+ + ++ E+ + + EN + ++ + N+L + N Sbjct 584 KKADKIIAELEKQKNVGVKENKIIEAKGELNSLERQAHN 622 Range 2: 665 to 784 Score:52.0 bits(123), Expect:2e-05, Method:Compositional matrix adjust., Identities:39/141(28%), Positives:63/141(44%), Gaps:21/141(14%) Query 809 ECQFGILKIKIPYHELIPGNETLPKQNSSSPQKSSLNVKPLTKNFKKYHNLQDSEIPPTL 868 E Q GI+K+K+ ++ E + K N++ P+K + + + L Sbjct 665 EVQIGIIKVKVSDRDI----ERIAK-NNAQPKKKLVRATSAIRRSNAHSELD-------- 711 Query 869 QHGGNTIQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSY 928 L G DE++ LD +D +D V IIHG G G I++ V ++L S++ Sbjct 712 --------LRGQRYDEAMTNLDRYIDSALLAGLDIVTIIHGIGTGAIRKGVWQYLRSSNH 763 Query 929 KLRFRGGRHGEGGDGVTIVEF 949 F EGG+G TIV+ Sbjct 764 VKGFNYAPANEGGNGATIVKL 784 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Thermus thermophilus HB8] Sequence ID: Q5SHT5.1 Length: 744 Range 1: 106 to 487 Score:214 bits(546), Expect:2e-57, Method:Compositional matrix adjust., Identities:131/401(33%), Positives:218/401(54%), Gaps:19/401(4%) Query 132 LFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKK 191 L ++ + H ++ K++D +G + ASP L R L +++I+++L ++ + Sbjct 106 LSQVAEGIGDHTPFLERVRKALDEEGAVKDEASPRLAQIRRELRPLRQQILDRLYALMDR 165 Query 192 QDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLE 251 R A QD LR Y +P+RA + GI S+SG+T+FIEP ++ +L+ Sbjct 166 H--REAFQDRFVTLRRERYCVPVRAGMAQKVPGILLDESESGATLFIEPFSVVKLNNRLQ 223 Query 252 KAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLK 311 + E E RILR+LS+ E + + E L D + A+ A + +P F Sbjct 224 ALRLKEEEEVNRILRDLSERLA-KDEGVPKTLEALGLLDLVQAQAALARDLGLSRPAF-- 280 Query 312 PRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMK 371 R+ L A HPL + N L K++ + ++SGPN GGKT +K Sbjct 281 ----GERYELYRAFHPLI----PDAVRNSFALDEKNR------ILLISGPNMGGKTALLK 326 Query 372 TVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQAN 431 T+G+ LMA++GLFV+ +KA + + ++ ++GD Q+ +E+LSTF+GHL +++ + E+A Sbjct 327 TLGLAVLMAQSGLFVAAEKALLAWPDRVYADIGDEQSLQENLSTFAGHLRRLREMLEEAT 386 Query 432 ELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGS 491 SL+L+DE GTDP G A++++ LE + ++TTH S LK A N S Sbjct 387 SHSLVLIDELGSGTDPEEGAALSQAILEALLERGVKGMVTTHLSPLKAFAQGREGIQNAS 446 Query 492 MEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKA 532 M F+ L PTY+L+ G+PG+SYA+ +A R+ L ++++A Sbjct 447 MRFDLEALRPTYELVLGVPGRSYALAIARRLALPEEVLKRA 487 Range 2: 668 to 742 Score:47.0 bits(110), Expect:9e-04, Method:Compositional matrix adjust., Identities:23/75(31%), Positives:40/75(53%), Gaps:0/75(0%) Query 875 IQLLGCTVDESLDKLDIELDKMHRMDVDRVVIIHGHGMGKIKESVRRHLEDSSYKLRFRG 934 + L G TV E+L ++D L++ + + + ++HG G G +++++R L F Sbjct 668 VDLRGLTVAEALLEVDQALEEARALGLSTLRLLHGKGTGALRQAIREALRRDKRVESFAD 727 Query 935 GRHGEGGDGVTIVEF 949 GEGG GVT+V Sbjct 728 APPGEGGHGVTVVAL 742 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus pneumoniae G54] Sequence ID: B5E7E8.1 Length: 778 Range 1: 141 to 561 Score:210 bits(535), Expect:9e-56, Method:Compositional matrix adjust., Identities:143/440(33%), Positives:242/440(55%), Gaps:27/440(6%) Query 157 GNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLPIRA 216 G I + AS EL R ++ ++ ++ + L ++LK++ L + + R+G VLP++ Sbjct 141 GFIENFASEELARIRRKIHDSESQVRDVLQDLLKQK--AQMLTEGIVASRNGRQVLPVKN 198 Query 217 DRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVH 276 ++ I G+ +S SG+TV+IEP+ + ++ + D E RIL+E+S+ Sbjct 199 TYRNKIAGVVHDISASGNTVYIEPREVVKLSEEIASLRADERYEMLRILQEISERVRPHA 258 Query 277 EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKC 336 +I + + I+ D I A+ +F + P+ + N L++ HPL K Sbjct 259 AEIANDAWIIGHLDLIRAKVRFIQERQAVVPQLSE----NQEIQLLHVCHPLV----KNA 310 Query 337 IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDK-AEIQD 395 +AND+H Q T+ V++GPN GGKT+ +KT+G+ +MA++GL + DK + + Sbjct 311 VANDVHFG---QDLTA---IVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGI 364 Query 396 YENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMAR 455 +E IF ++GD Q+ E+ LSTFS H+ I I + N+ SL+LLDE GTDP G A+A Sbjct 365 FEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAM 424 Query 456 STLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYA 515 + LE +++ + TTH+ LK + N SMEF+ L PTY+ + G+PG+S A Sbjct 425 AILEDLRLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPGRSNA 484 Query 516 IELAERMGLNNNIIQKARTYYGSESE--RMENLLKELQL---KRIEINEELTKQNLLTQK 570 E+A+R+GL+ I+ A +++ R+ L+E L KR++ E+ ++NL K Sbjct 485 FEIAKRLGLSEVIVGDASQQIDQDNDVNRIIEQLEEQTLESRKRLDNIREVEQENL---K 541 Query 571 LDSEFKSLKNE--KEQLSEL 588 ++ K L NE +E+ +EL Sbjct 542 MNRALKKLYNELNREKETEL 561 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus pneumoniae Taiwan19F-14] Sequence ID: C1CPR7.1 Length: 778 Range 1: 141 to 561 Score:209 bits(531), Expect:3e-55, Method:Compositional matrix adjust., Identities:142/440(32%), Positives:242/440(55%), Gaps:27/440(6%) Query 157 GNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLPIRA 216 G I + AS EL R ++ ++ ++ + L ++LK++ L + + R+G VLP++ Sbjct 141 GFIENFASEELARIRRKIHDSESQVRDVLQDLLKQK--AQMLTEGIVASRNGRQVLPVKN 198 Query 217 DRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVH 276 ++ I G+ +S SG+TV+IEP+ + ++ + D E RIL+E+S+ Sbjct 199 TYRNKIAGVVHDISASGNTVYIEPREVVKLSEEIASLRADERYEMLRILQEISERVRPHA 258 Query 277 EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKC 336 +I + + I+ D I A+ +F + P+ + N L++ HPL K Sbjct 259 TEIANDAWIIGHLDLIRAKVRFIQERQAVVPQLSE----NQEIQLLHVCHPLV----KNA 310 Query 337 IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDK-AEIQD 395 +AND+H Q T+ V++GPN GGKT+ +KT+G+ +MA++GL + D+ + + Sbjct 311 VANDVHFG---QDLTA---IVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADRGSRVGI 364 Query 396 YENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMAR 455 +E IF ++GD Q+ E+ LSTFS H+ I I + N+ SL+LLDE GTDP G A+A Sbjct 365 FEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAM 424 Query 456 STLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYA 515 + LE +++ + TTH+ LK + N SMEF+ L PTY+ + G+PG+S A Sbjct 425 AILEDLRLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPGRSNA 484 Query 516 IELAERMGLNNNIIQKARTYYGSESE--RMENLLKELQL---KRIEINEELTKQNLLTQK 570 E+A+R+GL+ I+ A +++ R+ L+E L KR++ E+ ++NL K Sbjct 485 FEIAKRLGLSEVIVGDASQQIDQDNDVNRIIEQLEEQTLESRKRLDNIREVEQENL---K 541 Query 571 LDSEFKSLKNE--KEQLSEL 588 ++ K L NE +E+ +EL Sbjct 542 MNRALKKLYNELNREKETEL 561 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus pneumoniae Hungary19A-6] Sequence ID: B1I9K1.1 Length: 778 Range 1: 141 to 561 Score:208 bits(529), Expect:5e-55, Method:Compositional matrix adjust., Identities:142/440(32%), Positives:242/440(55%), Gaps:27/440(6%) Query 157 GNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLPIRA 216 G I + AS EL R ++ ++ ++ + L ++LK++ L + + R+G VLP++ Sbjct 141 GFIENFASEELARIRRKIHDSESQVRDVLQDLLKQK--AQMLTEGIVASRNGRQVLPVKN 198 Query 217 DRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVH 276 ++ I G+ +S SG+TV+IEP+ + ++ + D E RIL+E+S+ Sbjct 199 TYRNKIAGVVHDISASGNTVYIEPREVVKLSEEIASLRADERYEMLRILQEISERVRPHA 258 Query 277 EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKC 336 +I + + I+ D I A+ +F + P+ + N L++ HPL K Sbjct 259 AEIANDAWIIGHLDLIRAKVRFIQERQAVVPQLSE----NQEIQLLHVCHPLV----KNA 310 Query 337 IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDK-AEIQD 395 +AND++ Q T+ V++GPN GGKT+ +KT+G+ +MA++GL + DK + + Sbjct 311 VANDVYFG---QDLTA---IVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGI 364 Query 396 YENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMAR 455 +E IF ++GD Q+ E+ LSTFS H+ I I + N+ SL+LLDE GTDP G A+A Sbjct 365 FEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAM 424 Query 456 STLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYA 515 + LE +++ + TTH+ LK + N SMEF+ L PTY+ + G+PG+S A Sbjct 425 AILEDLRLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPGRSNA 484 Query 516 IELAERMGLNNNIIQKARTYYGSESE--RMENLLKELQL---KRIEINEELTKQNLLTQK 570 E+A+R+GL+ I+ A +++ R+ L+E L KR++ E+ ++NL K Sbjct 485 FEIAKRLGLSEVIVGDASQQIDQDNDVNRIIEQLEEQTLESRKRLDNIREVEQENL---K 541 Query 571 LDSEFKSLKNE--KEQLSEL 588 ++ K L NE +E+ +EL Sbjct 542 MNRALKKLYNELNREKETEL 561 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus pneumoniae D39] Sequence ID: Q04M67.1 Length: 778 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus pneumoniae R6] Sequence ID: Q8DR26.1 Length: 778 Range 1: 141 to 561 Score:208 bits(529), Expect:6e-55, Method:Compositional matrix adjust., Identities:142/440(32%), Positives:242/440(55%), Gaps:27/440(6%) Query 157 GNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLPIRA 216 G I + AS EL R ++ ++ ++ + L ++LK++ L + + R+G VLP++ Sbjct 141 GFIENFASEELARIRRKIHDSESQVRDVLQDLLKQK--AQMLTEGIVASRNGRQVLPVKN 198 Query 217 DRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVH 276 ++ I G+ +S SG+TV+IEP+ + ++ + D E RIL+E+S+ Sbjct 199 TYRNKIAGVVHDISASGNTVYIEPREVVKLSEEIASLRADERYEMLRILQEISERVRPHA 258 Query 277 EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKC 336 +I + + I+ D I A+ +F + P+ + N L++ HPL K Sbjct 259 AEIANDAWIIGHLDLIRAKVRFIQERQAVVPQLSE----NQEIQLLHVCHPLV----KNA 310 Query 337 IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDK-AEIQD 395 +AND++ Q T+ V++GPN GGKT+ +KT+G+ +MA++GL + DK + + Sbjct 311 VANDVYFG---QDLTA---IVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGI 364 Query 396 YENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMAR 455 +E IF ++GD Q+ E+ LSTFS H+ I I + N+ SL+LLDE GTDP G A+A Sbjct 365 FEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAM 424 Query 456 STLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYA 515 + LE +++ + TTH+ LK + N SMEF+ L PTY+ + G+PG+S A Sbjct 425 AILEDLRLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPGRSNA 484 Query 516 IELAERMGLNNNIIQKARTYYGSESE--RMENLLKELQL---KRIEINEELTKQNLLTQK 570 E+A+R+GL+ I+ A +++ R+ L+E L KR++ E+ ++NL K Sbjct 485 FEIAKRLGLSEVIVGDASQQIDQDNDVNRIIEQLEEQTLESRKRLDNIREVEQENL---K 541 Query 571 LDSEFKSLKNE--KEQLSEL 588 ++ K L NE +E+ +EL Sbjct 542 MNRALKKLYNELNREKETEL 561 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus pneumoniae ATCC 700669] Sequence ID: B8ZLH4.1 Length: 778 Range 1: 141 to 561 Score:207 bits(528), Expect:7e-55, Method:Compositional matrix adjust., Identities:142/440(32%), Positives:242/440(55%), Gaps:27/440(6%) Query 157 GNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLPIRA 216 G I + AS EL R ++ ++ ++ + L ++LK++ L + + R+G VLP++ Sbjct 141 GFIENFASEELARIRRKIHDSESQVRDVLQDLLKQK--AQMLTEGIVASRNGRQVLPVKN 198 Query 217 DRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVH 276 ++ I G+ +S SG+TV+IEP+ + ++ + D E RIL+E+S+ Sbjct 199 TYRNKIAGVVHDISASGNTVYIEPREVVKLSEEIASLRADERYEMLRILQEISERVRPHA 258 Query 277 EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKC 336 +I + + I+ D I A+ +F + P+ + N L++ HPL K Sbjct 259 AEIANDAWIIGHLDLIRAKVRFIQERQAVVPQLSE----NQEIQLLHVCHPLV----KNA 310 Query 337 IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDK-AEIQD 395 +AND++ Q T+ V++GPN GGKT+ +KT+G+ +MA++GL + DK + + Sbjct 311 VANDVYFG---QDLTA---IVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGI 364 Query 396 YENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMAR 455 +E IF ++GD Q+ E+ LSTFS H+ I I + N+ SL+LLDE GTDP G A+A Sbjct 365 FEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAM 424 Query 456 STLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYA 515 + LE +++ + TTH+ LK + N SMEF+ L PTY+ + G+PG+S A Sbjct 425 AILEDLRLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPGRSNA 484 Query 516 IELAERMGLNNNIIQKARTYYGSESE--RMENLLKELQL---KRIEINEELTKQNLLTQK 570 E+A+R+GL+ I+ A +++ R+ L+E L KR++ E+ ++NL K Sbjct 485 FEIAKRLGLSEVIVGDASQQIDQDNDVNRIIEQLEEQTLESRKRLDNIREVEQENL---K 541 Query 571 LDSEFKSLKNE--KEQLSEL 588 ++ K L NE +E+ +EL Sbjct 542 MNRALKKLYNELNREKETEL 561 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus pneumoniae TIGR4] Sequence ID: Q97SG5.1 Length: 778 Range 1: 141 to 561 Score:207 bits(528), Expect:7e-55, Method:Compositional matrix adjust., Identities:142/440(32%), Positives:242/440(55%), Gaps:27/440(6%) Query 157 GNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLPIRA 216 G I + AS EL R ++ ++ ++ + L ++LK++ L + + R+G VLP++ Sbjct 141 GFIENFASEELARIRRKIHDSESQVRDVLQDLLKQK--AQLLTEGIVASRNGRQVLPVKN 198 Query 217 DRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVH 276 ++ I G+ +S SG+TV+IEP+ + ++ + D E RIL+E+S+ Sbjct 199 TYRNKIAGVVHDISASGNTVYIEPREVVKLSEEIASLRADERYEMLRILQEISERVRPHA 258 Query 277 EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKC 336 +I + + I+ D I A+ +F + P+ + N L++ HPL K Sbjct 259 AEIANDAWIIGHLDLIRAKVRFIQERQAVVPQLSE----NQEIQLLHVCHPLV----KNA 310 Query 337 IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDK-AEIQD 395 +AND++ Q T+ V++GPN GGKT+ +KT+G+ +MA++GL + DK + + Sbjct 311 VANDVYFG---QDLTA---IVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGI 364 Query 396 YENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMAR 455 +E IF ++GD Q+ E+ LSTFS H+ I I + N+ SL+LLDE GTDP G A+A Sbjct 365 FEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAM 424 Query 456 STLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYA 515 + LE +++ + TTH+ LK + N SMEF+ L PTY+ + G+PG+S A Sbjct 425 AILEDLRLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPGRSNA 484 Query 516 IELAERMGLNNNIIQKARTYYGSESE--RMENLLKELQL---KRIEINEELTKQNLLTQK 570 E+A+R+GL+ I+ A +++ R+ L+E L KR++ E+ ++NL K Sbjct 485 FEIAKRLGLSEVIVGDASQQIDQDNDVNRIIEQLEEQTLESRKRLDNIREVEQENL---K 541 Query 571 LDSEFKSLKNE--KEQLSEL 588 ++ K L NE +E+ +EL Sbjct 542 MNRALKKLYNELNREKETEL 561 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus pneumoniae CGSP14] Sequence ID: B2ILV2.1 Length: 778 Range 1: 141 to 561 Score:207 bits(528), Expect:7e-55, Method:Compositional matrix adjust., Identities:142/440(32%), Positives:242/440(55%), Gaps:27/440(6%) Query 157 GNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLPIRA 216 G I + AS EL R ++ ++ ++ + L ++LK++ L + + R+G VLP++ Sbjct 141 GFIENFASEELARIRRKIHDSESQVRDVLQDLLKQK--AQMLTEGIVASRNGRQVLPVKN 198 Query 217 DRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVH 276 ++ I G+ +S SG+TV+IEP+ + ++ + D E RIL+E+S+ Sbjct 199 TYRNKIAGVVHDISASGNTVYIEPREVVKLSEEIASLRADERYEMLRILQEISERVRPHA 258 Query 277 EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKC 336 +I + + I+ D I A+ +F + P+ + N L++ HPL K Sbjct 259 AEIANDAWIIGHLDLIRAKVRFIQERQAVVPQLSE----NQEIQLLHVCHPLV----KNA 310 Query 337 IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDK-AEIQD 395 +AND++ Q T+ V++GPN GGKT+ +KT+G+ +MA++GL + DK + + Sbjct 311 VANDVYFG---QDLTA---IVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGI 364 Query 396 YENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMAR 455 +E IF ++GD Q+ E+ LSTFS H+ I I + N+ SL+LLDE GTDP G A+A Sbjct 365 FEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAM 424 Query 456 STLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYA 515 + LE +++ + TTH+ LK + N SMEF+ L PTY+ + G+PG+S A Sbjct 425 AILEDLRLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPGRSNA 484 Query 516 IELAERMGLNNNIIQKARTYYGSESE--RMENLLKELQL---KRIEINEELTKQNLLTQK 570 E+A+R+GL+ I+ A +++ R+ L+E L KR++ E+ ++NL K Sbjct 485 FEIAKRLGLSEVIVGDASQQIDQDNDVNRIIEQLEEQTLESRKRLDNIREVEQENL---K 541 Query 571 LDSEFKSLKNE--KEQLSEL 588 ++ K L NE +E+ +EL Sbjct 542 MNRALKKLYNELNREKETEL 561 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus pneumoniae JJA] Sequence ID: C1CCH3.1 Length: 778 Range 1: 141 to 561 Score:207 bits(528), Expect:7e-55, Method:Compositional matrix adjust., Identities:142/440(32%), Positives:242/440(55%), Gaps:27/440(6%) Query 157 GNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLPIRA 216 G I + AS EL R ++ ++ ++ + L ++LK++ L + + R+G VLP++ Sbjct 141 GFIENFASEELARIRRKIHDSESQVRDVLQDLLKQK--AQMLTEGIVASRNGRQVLPVKN 198 Query 217 DRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVH 276 ++ I G+ +S SG+TV+IEP+ + ++ + D E RIL+E+S+ Sbjct 199 TYRNKIAGVVHDISASGNTVYIEPREVVKLSEEIASLRADERYEMLRILQEISERVRPHA 258 Query 277 EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKC 336 +I + + I+ D I A+ +F + P+ + N L++ HPL K Sbjct 259 AEIANDAWIIGHLDLIRAKVRFIQERQAVVPQLSE----NQEIQLLHVCHPLV----KNA 310 Query 337 IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDK-AEIQD 395 +AND++ Q T+ V++GPN GGKT+ +KT+G+ +MA++GL + DK + + Sbjct 311 VANDVYFG---QDLTA---IVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGI 364 Query 396 YENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMAR 455 +E IF ++GD Q+ E+ LSTFS H+ I I + N+ SL+LLDE GTDP G A+A Sbjct 365 FEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAM 424 Query 456 STLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYA 515 + LE +++ + TTH+ LK + N SMEF+ L PTY+ + G+PG+S A Sbjct 425 AILEDLRLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPGRSNA 484 Query 516 IELAERMGLNNNIIQKARTYYGSESE--RMENLLKELQL---KRIEINEELTKQNLLTQK 570 E+A+R+GL+ I+ A +++ R+ L+E L KR++ E+ ++NL K Sbjct 485 FEIAKRLGLSEVIVGDASQQIDQDNDVNRIIEQLEEQTLESRKRLDNIREVEQENL---K 541 Query 571 LDSEFKSLKNE--KEQLSEL 588 ++ K L NE +E+ +EL Sbjct 542 MNRALKKLYNELNREKETEL 561 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus pneumoniae P1031] Sequence ID: C1CIQ8.1 Length: 778 Range 1: 141 to 561 Score:207 bits(528), Expect:7e-55, Method:Compositional matrix adjust., Identities:142/440(32%), Positives:242/440(55%), Gaps:27/440(6%) Query 157 GNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLPIRA 216 G I + AS EL R ++ ++ ++ + L ++LK++ L + + R+G VLP++ Sbjct 141 GFIENFASEELARIRRKIHDSESQVRDVLQDLLKQK--AQMLTEGIVASRNGRQVLPVKN 198 Query 217 DRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVH 276 ++ I G+ +S SG+TV+IEP+ + ++ + D E RIL+E+S+ Sbjct 199 TYRNKIAGVVHDISASGNTVYIEPREVVKLSEEIASLRADERYEMLRILQEISERVRPHA 258 Query 277 EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKC 336 +I + + I+ D I A+ +F + P+ + N L++ HPL K Sbjct 259 AEIANDAWIIGHLDLIRAKVRFIQERQAVVPQLSE----NQEIQLLHVCHPLV----KNA 310 Query 337 IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDK-AEIQD 395 +AND++ Q T+ V++GPN GGKT+ +KT+G+ +MA++GL + DK + + Sbjct 311 VANDVYFG---QDLTA---IVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGI 364 Query 396 YENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMAR 455 +E IF ++GD Q+ E+ LSTFS H+ I I + N+ SL+LLDE GTDP G A+A Sbjct 365 FEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAM 424 Query 456 STLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYA 515 + LE +++ + TTH+ LK + N SMEF+ L PTY+ + G+PG+S A Sbjct 425 AILEDLRLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPGRSNA 484 Query 516 IELAERMGLNNNIIQKARTYYGSESE--RMENLLKELQL---KRIEINEELTKQNLLTQK 570 E+A+R+GL+ I+ A +++ R+ L+E L KR++ E+ ++NL K Sbjct 485 FEIAKRLGLSEVIVGDASQQIDQDNDVNRIIEQLEEQTLESRKRLDNIREVEQENL---K 541 Query 571 LDSEFKSLKNE--KEQLSEL 588 ++ K L NE +E+ +EL Sbjct 542 MNRALKKLYNELNREKETEL 561 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Streptococcus pneumoniae 70585] Sequence ID: C1C5E4.1 Length: 778 Range 1: 141 to 561 Score:207 bits(527), Expect:9e-55, Method:Compositional matrix adjust., Identities:142/440(32%), Positives:242/440(55%), Gaps:27/440(6%) Query 157 GNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLPIRA 216 G I + AS EL R ++ ++ ++ + L ++LK++ L + + R+G VLP++ Sbjct 141 GFIENFASEELARIRRKIHDSESQVRDVLQDLLKQK--AQMLTEGIVASRNGRQVLPVKN 198 Query 217 DRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVH 276 ++ I G+ +S SG+TV+IEP+ + ++ + D E RIL+E+S+ Sbjct 199 TYRNKIAGVVHDISASGNTVYIEPREVVKLSEEIASLRADERYEMLRILQEISERVRPHA 258 Query 277 EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKC 336 +I + + I+ D I A+ +F + P+ + N L++ HPL K Sbjct 259 AEIANDAWIIGHLDLIRAKVRFIQERQAVVPQLSE----NQEIQLLHVCHPLV----KNA 310 Query 337 IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDK-AEIQD 395 +AND++ Q T+ V++GPN GGKT+ +KT+G+ +MA++GL + DK + + Sbjct 311 VANDVYFG---QDLTA---IVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGI 364 Query 396 YENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMAR 455 +E IF ++GD Q+ E+ LSTFS H+ I I + N+ SL+LLDE GTDP G A+A Sbjct 365 FEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAM 424 Query 456 STLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYA 515 + LE +++ + TTH+ LK + N SMEF+ L PTY+ + G+PG+S A Sbjct 425 AILEDLRLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPGRSNA 484 Query 516 IELAERMGLNNNIIQKARTYYGSESE--RMENLLKELQL---KRIEINEELTKQNLLTQK 570 E+A+R+GL+ I+ A +++ R+ L+E L KR++ E+ ++NL K Sbjct 485 FEIAKRLGLSEVIVGDASQQIDQDNDVNRIIEQLEEQTLESRKRLDNIREVEQENL---K 541 Query 571 LDSEFKSLKNE--KEQLSEL 588 ++ K L NE +E+ +EL Sbjct 542 MNRVLKKLYNELNREKETEL 561 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Treponema denticola ATCC 35405] Sequence ID: Q73MQ8.1 Length: 818 Range 1: 152 to 620 Score:206 bits(523), Expect:5e-54, Method:Compositional matrix adjust., Identities:144/479(30%), Positives:250/479(52%), Gaps:31/479(6%) Query 165 PELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEG 224 P L + ++++ + I + + R LQ ++ ++DG V+ +R++ K I G Sbjct 152 PSLRAIKNKIRSIEDDIDKTMRNYFTNDATRQMLQSNLPTVKDGRQVIAVRSNFKGRIPG 211 Query 225 IPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSE 284 I SQSG T ++EP+ + ++ L A + E E R+L++L+ E+I + E Sbjct 212 IIHEYSQSGQTFYLEPEEIVLKNNDLIAAHAEYERELLRLLQDLTSQIAEHTENIKEACE 271 Query 285 ILTQFDNIIARTKFA-------------GVIHGIKPEFLKPRDLNP-RFSLINAKHPLFL 330 +T+ D + A +++A G+ H I + P F L A+HPL Sbjct 272 AITKLDCVAAASRWAHSNNCVFAGSIDLGLSHSIDKDGSHDSKGTPLAFYLHQARHPLL- 330 Query 331 LENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDK 390 K + DL L+ + V +++GPN GGKTV++KT + AL+ + G V Sbjct 331 --GKSAVPIDLKLSKDDR------VLIITGPNTGGKTVSLKTAALFALINQTGWPVPAGP 382 Query 391 -AEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAI 449 + ++ I ++GD Q+ ++ LSTFS H+ + I +A + SLI+LDE GTDP Sbjct 383 LTRLPYFDFIACDIGDEQSMDQSLSTFSAHMKNVSEIIRRAGDKSLIILDELGSGTDPQE 442 Query 450 GVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGI 509 G A+A + L+ KKA V +TTH LK + N S+EF + L PTY++L G+ Sbjct 443 GCAIAMAVLDDLLEKKAFVFVTTHHGALKNYGYSKESCVNASVEFNQNTLSPTYRILMGV 502 Query 510 PGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIEINE-----ELTKQ 564 PG+S+A+++A+R GL +II+KA TY G+ + +L+K L K ++NE + + Sbjct 503 PGESHAVDIAKRNGLPEHIIEKAHTYLGNNRADVSDLIKGLIQKHEDLNEFELQKKEEEL 562 Query 565 NLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNKLQKRLNAFENRL-EIRERQFEKQK 622 L + S+ K L+ ++++L EL+ D ++ +++ EN + E+RE + ++K Sbjct 563 KLKEDRRRSDLKELQLKQKEL-ELKKDGIKRLDLFFEEKRKFLENLVRELREGELSREK 620 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Maridesulfovibrio salexigens DSM 2638] Sequence ID: C6BSW8.1 Length: 769 Range 1: 73 to 566 Score:201 bits(510), Expect:1e-52, Method:Compositional matrix adjust., Identities:146/509(29%), Positives:253/509(49%), Gaps:21/509(4%) Query 86 LFQNFLQRGALLSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDLKPHMEL 145 LFQ ++ +L ALY ++ TL +++ + + R ++ + + + Sbjct 73 LFQYLVKPNNVLDADALYALVQTLGQARTLKEALEIAEKR--EWDTILEFLEGVSWPEKT 130 Query 146 HAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWML 205 + L + +D DGNI +SPEL+ R + ++ +++ + + +DI LQDD + Sbjct 131 FSGLKRCLDQDGNIKDESSPELYDIRQSIRSLHQRCSKKVRDFIHGEDISRFLQDDFMTI 190 Query 206 RDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRIL 265 + YVLP++ + K ++GI S +G T + EP L +++ + EE +IL Sbjct 191 TNDRYVLPLKTNFKGRLQGIVHDYSNTGETCYFEPMFLVELNNSMQELKQQERTEELKIL 250 Query 266 RELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAK 325 L+ ++ ++ L ++D + A+ FA + + + F L A+ Sbjct 251 TYLTGLVRSEYDQCEAAYGFLVEYDVLQAKINFADAVKAVAVDVQS----GAGFDLRGAR 306 Query 326 HPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLF 385 HP LL + N L++ + T V ++SG NAGGKTV +KTVG+++ MA +G+ Sbjct 307 HP--LLASAVGGVNPLNI----ELPTDQKVLIVSGGNAGGKTVCLKTVGLLSAMAFSGIP 360 Query 386 VSCDKAEIQD-YENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVG 444 V +K + ++ IFV +GD Q+ EE++STFS + I RI + + +L +LDE G Sbjct 361 VPVEKGSVLPLFKEIFVIMGDEQSLEENVSTFSAQIQSISRIWDSMDSSTLFILDEFGSG 420 Query 445 TDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYK 504 TDPA G A+A++ ++ T THF LKT A S+ F+P P + Sbjct 421 TDPAQGAALAQAVVDGLLENGVTCFAATHFPALKTYALVTEGVRAASVLFDPSTKKPLFS 480 Query 505 LLNGIPGQSYAIELAERMGLNNNIIQKARTYY---GSESERMENLLKELQLKRIEINEEL 561 L G S A+++A G +++ KA Y GS+S + N L EL + R +EL Sbjct 481 LAYDQVGASIALDVAREHGFPESLLAKAEQYLLMEGSDSGSVMNRLNELAVSR---EKEL 537 Query 562 TKQNLLTQKLDSEFKSL--KNEKEQLSEL 588 + + + KL+S+ L K E+E+L+ L Sbjct 538 EEMDRIKAKLESKRAKLEEKFERERLTVL 566 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Solidesulfovibrio magneticus RS-1] Sequence ID: C4XS37.1 Length: 773 Range 1: 129 to 606 Score:198 bits(503), Expect:1e-51, Method:Compositional matrix adjust., Identities:140/488(29%), Positives:245/488(50%), Gaps:20/488(4%) Query 146 HAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWML 205 A L + + DG + +SPEL S R + + I+ ++ E + ++++ LQDD + Sbjct 129 QAALARCLGPDGRLKDESSPELFSVRQEIRSIHQTILTKVKEFISERELGPLLQDDYVTI 188 Query 206 RDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRIL 265 YVLP+RA+ K + G+ SQ+G T+++EP L +L++ +N+ E R++ Sbjct 189 SSDRYVLPLRANFKGRLPGVIHDYSQTGETIYVEPFFLVEINNRLQELKNEEREAEARVM 248 Query 266 RELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAK 325 L+ ++ +S +L D + A+ G PE + R + L+ A+ Sbjct 249 AFLTGLARDERREVAASYRLLVDCDVLWAKAALCDAFGGTLPEVAQGRAVR----LLAAR 304 Query 326 HPLFLLEN-KKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGL 384 HPL L +A DL LAP + +++G NAGGKTV +KT+G++A MA +GL Sbjct 305 HPLLALAGPDSAVAQDLELAPDQRA------LIVTGANAGGKTVCLKTLGLLAAMALSGL 358 Query 385 FV-SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFV 443 V + + + + + IFV LGD Q+ E+ LSTF+ + + R+ + +L+LLDE Sbjct 359 PVPAGEGSSLPFFAKIFVFLGDEQSLEDHLSTFTAQIRHLSRVWPDIDADTLVLLDEFGA 418 Query 444 GTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTY 503 GTDP+ G A+A++ ++ + A + THF LK + M F+P P Y Sbjct 419 GTDPSQGAALAQAVVDGLLDRGAYLAAATHFPALKAYGLSREGVRAACMLFDPATKKPLY 478 Query 504 KLLNGIPGQSYAIELAERMGLNNNIIQKARTYY---GSESERMENLLKELQLKRIEINEE 560 +L G S A+++A GL +I+++A Y G+++ + + L +L L+R E Sbjct 479 RLAYDQVGASIALDVAREHGLPEDILERANRYLLLDGNDTGLVFDRLNDLALRREHELEA 538 Query 561 LTKQNLL----TQKLDSEFKSLKNE-KEQLSELRGDLVENYRNKLQKRLNAFENRLEIRE 615 + + L QKL K +++ E++ EL D+V + R A + ++R+ Sbjct 539 IAAKRLAEEGKIQKLKDNLKKAQDKLVEEIRELSRDIVRRHEAGRLGRKEAQKALADVRK 598 Query 616 RQFEKQKE 623 R ++ E Sbjct 599 RLIDESNE 606 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Borreliella burgdorferi B31] Sequence ID: O51125.1 Length: 780 Range 1: 132 to 702 Score:179 bits(455), Expect:2e-45, Method:Compositional matrix adjust., Identities:170/620(27%), Positives:299/620(48%), Gaps:76/620(12%) Query 130 PNLFNLSNDLKPHMELHAKLNKSVDMDGNILSSASPELHSARSRLEHAKRKIVEQLDEIL 189 P L NL N+LK H+++ A KS E S +++ R++ Q+ +I+ Sbjct 132 PELKNLLNELKEHIDVDALELKS---------GVVKEYDSIEFEIKNLNRRVENQIKKII 182 Query 190 KKQDIRNA--LQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQ 247 NA L + + Y L ++++ K I+G +S SG T +IEP + Sbjct 183 S----LNAEYLTSNFVCYKSNKYTLALKSNFKGKIKGNIISISSSGETFYIEPNDIVNAN 238 Query 248 AQLEKAQNDVEVEEQRI----LRELSKDCYLVHEDILSSSEILTQF---DNIIARTKFAG 300 +L N + +E++RI LR LS VH +I+ + F D++ AR Sbjct 239 NRL----NYLSLEKERIILKILRNLSAK---VHSNIVLLDNLYNNFLYYDSLKARA---- 287 Query 301 VIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSG 360 I+GIK + + P +++ ++ +A HPL L++ K I P V +++G Sbjct 288 -IYGIKTKGVFP-EISNVLNIFDAHHPL--LKDSKAIT----FTPAENR-----VVIITG 334 Query 361 PNAGGKTVAMKTVGIIALMAKAGL-FVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGH 419 PNAGGKTV +KT+G+++ M + G+ V + + + ++NIF+++GD Q+ LSTFS H Sbjct 335 PNAGGKTVTLKTIGLLSAMFQFGIPIVVGESSTFKIFDNIFIDIGDEQSISNSLSTFSSH 394 Query 420 LAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKT 479 ++ I I + + SL++ DE GTD G A+A S LEY + V+I+TH++ LK Sbjct 395 MSNISYILKHTTKDSLVIFDEFCSGTDIDQGQALAISILEYLININSYVLISTHYNALKY 454 Query 480 LADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSE 539 A N SM + + P Y L+ IPG+SYA +A + ++ +I+ +A Y S+ Sbjct 455 FAYTHEGVVNASMRMDLETMQPNYNLIFSIPGESYAFNVASKALIDRSIVIRANEIYSSQ 514 Query 540 SERMENLLKELQLKRIEINEELTKQNLLTQKLDSEFKSLKNEKEQLSELRGDLVENYRNK 599 + +L++L IE ++L L+ + +D + ++ ++++L DL+ +N Sbjct 515 KTEINEILEKL----IEKEKDLL---LIKESMDKKLIQIELQEKELENFYQDLLLREKNI 567 Query 600 LQKRLNAFENRLEIRERQFEKQKETLLREIHE--------ISHKETIENNLEISQAQQNN 651 K LN +N R K E L+REI E + +E N+++ + N+ Sbjct 568 ETKLLNE-QNEFLKNSR---KVLENLVREIKEGNINVAKNKAFISDLEKNVDLKTNKVNS 623 Query 652 LSEKNQNKLAP---AQKKEIINTAKPQKLSGFEA------LSGIKLPKTTSAKSSPNYQS 702 L+ K +N +A K I+N+ K+ G + + ++S S N++ Sbjct 624 LNNK-RNVVADFKIGDKVRIVNSNAKGKIVGISKKKITVNVGAFNVSVSSSEISLENFKE 682 Query 703 LDEKAERFRAPKNMSSRSLL 722 E + F + + +LL Sbjct 683 KKENGKNFNFSIDYNKENLL 702 >RecName: Full=DNA mismatch repair protein MutS [Thermosipho melanesiensis BI429] Sequence ID: A6LLR1.1 Length: 819 Range 1: 346 to 796 Score:120 bits(300), Expect:2e-26, Method:Compositional matrix adjust., Identities:119/478(25%), Positives:231/478(48%), Gaps:49/478(10%) Query 97 LSPQALYQILITLKLCHSIQSFFKYEKSRATKYPNLFNLSNDLKPHMELHAKLNKSV--- 153 +SP+ L + +L L SI+ + + NL + + L E+ L K++ Sbjct 346 VSPKDLVSLKRSLYLVPSIKDALRTNE-------NLVSFAQSLNEFNEVVGILEKALYDE 398 Query 154 ----DMDGNILSSA-SPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQ------DDV 202 DGN++ S EL R+ L H++ E+L E + + + +Q + V Sbjct 399 PSNAPGDGNVIKGGYSVELDDYRNLLFHSE----EKLKEFQESEREKTGIQKLRVGFNQV 454 Query 203 WMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQ 262 + G+Y+ + K+ + R + S +I Q L + ++ A+ VE+ E+ Sbjct 455 F----GYYIEVPKGQVKNVPDYYIRKQTLVNSERYI-TQELKEFEEKIMSAREKVELIEK 509 Query 263 RILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLI 322 + EL + + + + ++ L++ D I + ++G + KP+ F + Sbjct 510 SLFEELKQKLSEYIDGLRNLAQKLSELDAI-SNLAMVARLYG----YTKPKFTGGEFYVK 564 Query 323 NAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKA 382 NA+H + +AND+++ + + +++++GPN GK+ ++ VG+IA+MA+ Sbjct 565 NARHAVVERYVSDFVANDIYMDDRRR------MYIVTGPNMSGKSTYIRQVGLIAVMAQI 618 Query 383 GLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGF 442 G FV D AEI ++ +F +G R + STF ++++ I E+A + SL+LLDE Sbjct 619 GSFVPADDAEIPIFDRVFTRMGARDDISTGKSTFLIEMSEVALILEKATKKSLVLLDEVG 678 Query 443 VGTDPAIGVAMARSTLEY-FSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEP--HKL 499 GT G+++A + EY ++ + THF+ L L+D N ++E + + Sbjct 679 RGTSTFDGISIAWAMSEYIYNEIGCETMFATHFTELTELSDVYEGIKNLTIEVRETNNGV 738 Query 500 LPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYG-----SESERMENLLKELQL 552 + +K++ GI +SY IE+A+ G+ + ++++A+ SE E+ +LKE QL Sbjct 739 VFLHKVVEGIADRSYGIEVAQIAGVPDGVVERAKEILDIISQKSELEKKVRVLKEGQL 796 >RecName: Full=DNA mismatch repair protein MutS [Thermotoga petrophila RKU-1] Sequence ID: A5ILG0.1 Length: 793 Range 1: 407 to 763 Score:118 bits(295), Expect:8e-26, Method:Compositional matrix adjust., Identities:98/377(26%), Positives:186/377(49%), Gaps:28/377(7%) Query 164 SPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQ------DDVWMLRDGHYVLPIRAD 217 SPEL R LEHA+ E+L E +K+ R +Q + V+ G+Y+ +A+ Sbjct 407 SPELDEYRDLLEHAE----ERLKEFEEKERKRTGIQKLKVGYNQVF----GYYIEVTKAN 458 Query 218 RKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVHE 277 + R + S FI P+ L + ++ A+ +E E+ + + + ++ E Sbjct 459 LDKIPDDYERKQTLVNSERFITPE-LKEFETKIMAAKERIEELEKELFKNVCEEVKKHKE 517 Query 278 DILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCI 337 +L SE L + D +++ + +++ + KP R + +HP+ + + Sbjct 518 ILLKISEELAKID-VLSTLAYDAILYS----YTKPIFSEGRLEIKGGRHPIVERFTQNFV 572 Query 338 ANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYE 397 ND+++ + + V++GPN GK+ ++ VG+I+LMA+ G FV KA + ++ Sbjct 573 ENDIYMDNERR------FVVITGPNMSGKSTFIRQVGLISLMAQIGSFVPAQKAILPVFD 626 Query 398 NIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARST 457 IF +G R + STF + ++ I ++ E SL+LLDE GT GV++A + Sbjct 627 RIFTRMGARDDLAGGRSTFLVEMNEMALILLKSTEKSLVLLDEVGRGTSTQDGVSIAWAI 686 Query 458 LEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYA 515 E + V+ THF+ L L + + N ++ E ++ T+K+++G+ +SY Sbjct 687 SEELIKRGCKVLFATHFTELTELEKHFPQVQNKTILVKEEGKNVIFTHKVVDGVADRSYG 746 Query 516 IELAERMGLNNNIIQKA 532 IE+A+ G+ + +I +A Sbjct 747 IEVAKIAGIPDRVINRA 763 >RecName: Full=DNA mismatch repair protein MutS [Thermotoga sp. RQ2] Sequence ID: B1LAW3.1 Length: 793 Range 1: 368 to 763 Score:113 bits(282), Expect:2e-24, Method:Compositional matrix adjust., Identities:102/412(25%), Positives:200/412(48%), Gaps:28/412(6%) Query 133 FNLSNDLKPHMELHAKLNKSVDMD-------GNILSSA-SPELHSARSRLEHAKRKIVEQ 184 F + N L EL L ++++ D G ++ SPEL R LEHA+ ++ E Sbjct 368 FGVFNKLAFPEELVDLLRRAIEDDPLGSPGEGKVIKRGFSPELDEYRDLLEHAEERLKEF 427 Query 185 LDEILKKQDIRN--ALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQA 242 ++ ++ I+ + V+ G+Y+ +A+ + R + S FI P+ Sbjct 428 EEKERERTGIQKLRVGYNQVF----GYYIEVTKANLDKIPDDYERKQTLVNSERFITPE- 482 Query 243 LAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVI 302 L + ++ A+ +E E+ + + + ++ E +L SE L + D +++ + ++ Sbjct 483 LKEFETKIMAAKERIEEMEKELFKSVCEEVKKHKEVLLKLSEDLAKMD-VLSTLAYDAIL 541 Query 303 HGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPN 362 + + KP R + +HP+ + + ND+++ + + V++GPN Sbjct 542 YN----YTKPVFSEDRLEIKGGRHPVVERFTQNFVENDIYMDNEKR------FVVITGPN 591 Query 363 AGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQ 422 GK+ ++ VG+I+LMA+ G FV KA + ++ IF +G R + STF + + Sbjct 592 MSGKSTFIRQVGLISLMAQIGSFVPAQKAILPVFDRIFTRMGARDDLAGGRSTFLVEMNE 651 Query 423 IKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLAD 482 + I ++ E SL+LLDE GT GV++A + E + V+ THF+ L L Sbjct 652 MALILLKSTEKSLVLLDEVGRGTSTQDGVSIAWAISEELIKRGCKVLFATHFTELTELEK 711 Query 483 NDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKA 532 + + N ++ E ++ T+K+++G+ +SY IE+A+ G+ + +I +A Sbjct 712 HFPQVQNKTILVKEEGKNVIFTHKVVDGVADRSYGIEVAKIAGIPDRVINRA 763 >RecName: Full=DNA mismatch repair protein MutS [Thermotoga neapolitana DSM 4359] Sequence ID: B9K800.1 Length: 801 Range 1: 408 to 770 Score:111 bits(278), Expect:7e-24, Method:Compositional matrix adjust., Identities:97/379(26%), Positives:184/379(48%), Gaps:26/379(6%) Query 164 SPELHSARSRLEHAKRKIVEQLDEILKKQDIRN--ALQDDVWMLRDGHYVLPIRADRKSG 221 SPEL R LEH++ K+ E + +K I+ + V+ G+Y+ +A+ Sbjct 408 SPELDEYRDLLEHSEEKLKEFEEREREKTGIQKLKVGYNQVF----GYYIEVTKANLDKV 463 Query 222 IEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILS 281 E R + S F P+ L + ++ A+ +E E+ + R + ++ E +L Sbjct 464 PEDYERKQTLVNSERFTTPE-LKEFETKIMAAKERIEELEKELFRNVCEEVKKHKETLLE 522 Query 282 SSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDL 341 SE L + D ++A + +++ + +P R +I +HP+ + + NDL Sbjct 523 ISEELARID-VLATLAYDAILYN----YTRPTFSEDRMEIIGGRHPVVERFTRDFVENDL 577 Query 342 HLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFV 401 ++ + + V++GPN GK+ ++ VG+I+LMA+ G FV KA + ++ IF Sbjct 578 YMDDEKR------FTVITGPNMSGKSTFIRQVGLISLMAQIGSFVPAKKAVLPVFDRIFT 631 Query 402 ELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYF 461 +G R + STF + ++ I +A + SL+LLDE GT G+++A + E Sbjct 632 RMGARDDLAGGRSTFLVEMNEMALILLKATKKSLVLLDEVGRGTGTQDGISIAWAISEEL 691 Query 462 SVKKATVIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGI------PGQS 513 + V+ THF L L ++ + N ++ E ++ T+++++G+ +S Sbjct 692 ISRGCKVLFATHFIELTNLENSFPQVQNKTILVKEEGSNVVFTHRVVDGVADRSYGADRS 751 Query 514 YAIELAERMGLNNNIIQKA 532 Y IE+A G+ N+I++A Sbjct 752 YGIEVARIAGIPENVIRRA 770 >RecName: Full=DNA mismatch repair protein MutS [Staphylococcus haemolyticus JCSC1435] Sequence ID: Q4L5Z9.1 Length: 883 Range 1: 456 to 779 Score:112 bits(279), Expect:7e-24, Method:Compositional matrix adjust., Identities:87/336(26%), Positives:166/336(49%), Gaps:21/336(6%) Query 208 GHYVLPIRADRKSGIE----GIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQR 263 G+++ RA+ + G E G R + S + FI + + L V++E Q Sbjct 456 GYFIEITRANLQ-GFEPSKFGYHRKQTLSNAERFITDELKEKEDIILGAEDKAVDLEYQL 514 Query 264 ILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLIN 323 +R L + E + ++I+++ D + + + A + +KPEF N SL N Sbjct 515 FVR-LREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYNYVKPEFSD----NKTLSLEN 569 Query 324 AKHPLF--LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAK 381 ++HP+ +++ + ND L + ++++++GPN GK+ M+ V II++MA+ Sbjct 570 SRHPVVERVMDYNDYVPNDCKL------DKDNFIYLITGPNMSGKSTYMRQVAIISIMAQ 623 Query 382 AGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEG 441 G +V C+KAE+ ++ IF +G + STF + + ++ A E SLI+ DE Sbjct 624 MGAYVPCNKAELPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEI 683 Query 442 FVGTDPAIGVAMARSTLEYFS-VKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHK-- 498 GT G+A+A++ +EY + A + +TH+ L TL N + + ++ Sbjct 684 GRGTSTYDGLALAQAMIEYVAQTSHAKTLFSTHYHELTTLDQELPSLKNVHVAADEYQGE 743 Query 499 LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKART 534 L+ +K+ +G SY I++A+ L + +I +A+ Sbjct 744 LIFLHKVKDGAVDDSYGIQVAKLANLPDEVINRAQV 779 >RecName: Full=DNA mismatch repair protein MutS [Candidatus Koribacter versatilis Ellin345] Sequence ID: Q1IN52.1 Length: 882 Range 1: 520 to 814 Score:111 bits(277), Expect:1e-23, Method:Compositional matrix adjust., Identities:86/305(28%), Positives:145/305(47%), Gaps:18/305(5%) Query 237 FIEPQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIART 296 F P+ L +A++ AQ + E+RI EL + + L + D + Sbjct 520 FTTPE-LKEYEAKVLDAQEKIVEIERRIFGELRTAIAAEARRVRQTGLALAEVDVLANFA 578 Query 297 KFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLL-----ENKKCIANDLHLAPKSQGET 351 A + +P+F D + F LI A+HP+ L + + NDL+L T Sbjct 579 HLAATRNYCRPKF----DQSGEFELIEARHPVIELPELTGSADRFVPNDLYL-----NAT 629 Query 352 SPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREE 411 + V VL+GPN GGK+ ++ ++A+MA+ G FV A + + +F +G N Sbjct 630 THTVIVLTGPNMGGKSTYLRQAALVAVMAQMGSFVPARSARLSVVDRVFTRIGAADNLAR 689 Query 412 DLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVII 470 STF + + I A + SLILLDE GT G+A+A + +E+ + +A + Sbjct 690 GRSTFMVEMTETAAILNTATDRSLILLDEVGRGTSTYDGLAIAWACIEFLHARTRAKALF 749 Query 471 TTHFSNLKTLADNDS--RFFNGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNI 528 TH+ L LAD S + ++ S++ ++ ++ G +SY IE+A+ GL + Sbjct 750 ATHYHELTVLADELSGVKNYHVSVKESGGNVVFLRRVEPGAADKSYGIEVAKLAGLPAEV 809 Query 529 IQKAR 533 I++AR Sbjct 810 IERAR 814 >RecName: Full=DNA mismatch repair protein MutS [Brucella anthropi ATCC 49188] Sequence ID: A6WV86.1 Length: 910 Range 1: 541 to 879 Score:109 bits(273), Expect:3e-23, Method:Compositional matrix adjust., Identities:87/346(25%), Positives:164/346(47%), Gaps:20/346(5%) Query 243 LAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVI 302 LA ++++ A + E + EL+ + + I +++ L FD + A Sbjct 541 LAELESKIANAADRALSIELAVFEELTAEAVSHADSIRAAASALAVFDVSASLAVLAEEQ 600 Query 303 HGIKPEFLKPRDLNPRFSLINAKHPLF--LLENKKC---IANDLHLAPKSQGETSPYVWV 357 +P+ D + F+++ +HP+ L + +AND L+P++ G +W+ Sbjct 601 GYCRPQV----DDSLSFNIVAGRHPVVEQALRRQAANPFVANDCDLSPQADGGNGA-IWL 655 Query 358 LSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFS 417 L+GPN GGK+ ++ +IA+MA+ G FV A+I + +F +G + STF Sbjct 656 LTGPNMGGKSTFLRQNALIAIMAQMGSFVPAGSAKIGVVDRLFSRVGASDDLARGRSTFM 715 Query 418 GHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSN 476 + + I QA E SL++LDE GT G+++A + +EY K + + THF Sbjct 716 VEMVETAAILNQAGERSLVILDEIGRGTATFDGLSIAWAAVEYLHEKNRCRALFATHFHE 775 Query 477 LKTLADNDSRFFNGSMEFE--PHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKART 534 + L++ R N +M + + ++ +++ G +SY +++A GL ++ +AR Sbjct 776 MTALSEKLERLSNVTMRVKEWDNDVVFLHEVAKGAADRSYGVQVARLAGLPEAVVNRARD 835 Query 535 YY-----GSESERMENLLKELQLKRIEINEELTKQNLLTQKLDSEF 575 G S + + L+ +L L + + +E K L Q DS+ Sbjct 836 VLHQLEAGETSGKADKLIDDLPLFSVVLQQE--KPKLQVQGKDSDL 879 >RecName: Full=DNA mismatch repair protein MutS [Chelativorans sp. BNC1] Sequence ID: Q11B27.1 Length: 881 Range 1: 587 to 808 Score:108 bits(271), Expect:7e-23, Method:Compositional matrix adjust., Identities:68/224(30%), Positives:118/224(52%), Gaps:11/224(4%) Query 319 FSLINAKHPLFLLENKK-----CIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 F + +HP+ +K +AND L+P ++GE + +W+L+GPN GGK+ ++ Sbjct 587 FHIEGGRHPVVEQALRKQLGEPFVANDCDLSP-AEGEKAGAIWLLTGPNMGGKSTFLRQN 645 Query 374 GIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANEL 433 +IA++A+ G FV A I + +F +G + STF + + I QA E Sbjct 646 ALIAVLAQMGSFVPARSARIGVVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQAGER 705 Query 434 SLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSM 492 SL++LDE GT G+++A + +EY K + + THF + L + SR N +M Sbjct 706 SLVILDEIGRGTATFDGLSIAWAAVEYLHEKNRCRALFATHFHEMTALTEKLSRLVNVTM 765 Query 493 ---EFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 EFE +++ +++ G +SY I++A GL ++++AR Sbjct 766 RVKEFE-GEVIFLHEVARGAADRSYGIQVARLAGLPQTVVERAR 808 >RecName: Full=DNA mismatch repair protein MutS [Brucella abortus 2308] Sequence ID: Q2YNZ0.1 Length: 910 >RecName: Full=DNA mismatch repair protein MutS [Brucella abortus bv. 1 str. 9-941] Sequence ID: Q57FM9.1 Length: 910 Range 1: 541 to 879 Score:108 bits(270), Expect:8e-23, Method:Compositional matrix adjust., Identities:88/346(25%), Positives:162/346(46%), Gaps:20/346(5%) Query 243 LAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVI 302 LA ++++ A + E I EL+ + + I +++ L+ FD A A Sbjct 541 LAELESKIANAADRALSIELAIFEELTAEAVAHADSIRAAASALSVFDVSTALAVLAEEQ 600 Query 303 HGIKPEFLKPRDLNPRFSLINAKHPLF--LLENKKC---IANDLHLAPKSQGETSPYVWV 357 +P D + F+++ +HP+ L + +AND L+P+ G +W+ Sbjct 601 GYCRPHV----DDSLSFNIVAGRHPVVEQALRRQAANPFVANDCDLSPQRDGGDGA-IWL 655 Query 358 LSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFS 417 L+GPN GGK+ ++ +IA++A+ G FV A I + +F +G + STF Sbjct 656 LTGPNMGGKSTFLRQNALIAILAQMGSFVPAGSAHIGVVDRLFSRVGASDDLARGRSTFM 715 Query 418 GHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSN 476 + + I QA E SL++LDE GT G+++A + +EY K + + THF Sbjct 716 VEMVETAAILNQAGEHSLVILDEIGRGTATFDGLSIAWAAVEYLHEKNRCRALFATHFHE 775 Query 477 LKTLADNDSRFFNGSMEFE--PHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKART 534 + L++ R N +M + + ++ +++ G +SY +++A GL ++ +AR Sbjct 776 MTALSEKLERLSNVTMRVKEWDNDVIFLHEVAKGAADRSYGVQVARLAGLPEAVVNRARD 835 Query 535 YY-----GSESERMENLLKELQLKRIEINEELTKQNLLTQKLDSEF 575 G S + + L+ +L L + + +E K + Q DSE Sbjct 836 VLHQLEAGETSGKADRLIDDLPLFSVMLQQEKPKPQI--QAKDSEL 879 >RecName: Full=DNA mismatch repair protein MutS [Brucella suis ATCC 23445] Sequence ID: B0CIQ5.1 Length: 910 Range 1: 541 to 879 Score:108 bits(270), Expect:9e-23, Method:Compositional matrix adjust., Identities:88/346(25%), Positives:162/346(46%), Gaps:20/346(5%) Query 243 LAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVI 302 LA ++++ A + E I EL+ + + I +++ L+ FD A A Sbjct 541 LAELESKIANAADRALSIELAIFEELTAEAVAHADSIRAAASALSVFDVSTALAVLAEEQ 600 Query 303 HGIKPEFLKPRDLNPRFSLINAKHPLF--LLENKKC---IANDLHLAPKSQGETSPYVWV 357 +P D + F+++ +HP+ L + +AND L+P+ G +W+ Sbjct 601 GYCRPHV----DDSLSFNIVAGRHPVVEQALRRQAANPFVANDCDLSPQRDGGDGA-IWL 655 Query 358 LSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFS 417 L+GPN GGK+ ++ +IA++A+ G FV A I + +F +G + STF Sbjct 656 LTGPNMGGKSTFLRQNALIAILAQMGSFVPAGSAHIGVVDRLFSRVGASDDLARGRSTFM 715 Query 418 GHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSN 476 + + I QA E SL++LDE GT G+++A + +EY K + + THF Sbjct 716 VEMVETAAILNQAGEHSLVILDEIGRGTATFDGLSIAWAAVEYLHEKNRCRALFATHFHE 775 Query 477 LKTLADNDSRFFNGSMEFE--PHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKART 534 + L++ R N +M + + ++ +++ G +SY +++A GL ++ +AR Sbjct 776 MTALSEKLERLSNVTMRVKEWDNDVIFLHEVAKGAADRSYGVQVARLAGLPEAVVNRARD 835 Query 535 YY-----GSESERMENLLKELQLKRIEINEELTKQNLLTQKLDSEF 575 G S + + L+ +L L + + +E K + Q DSE Sbjct 836 VLHQLEAGETSGKADRLIDDLPLFSVMLQQEKPKPQI--QAKDSEL 879 >RecName: Full=DNA mismatch repair protein MutS [Brucella canis ATCC 23365] Sequence ID: A9M792.1 Length: 910 >RecName: Full=DNA mismatch repair protein MutS [Brucella suis 1330] Sequence ID: Q8G310.1 Length: 910 Range 1: 541 to 879 Score:108 bits(270), Expect:9e-23, Method:Compositional matrix adjust., Identities:88/346(25%), Positives:162/346(46%), Gaps:20/346(5%) Query 243 LAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVI 302 LA ++++ A + E I EL+ + + I +++ L+ FD A A Sbjct 541 LAELESKIANAADRALSIELAIFEELTAEAVAHADSIRAAASALSVFDVSTALAVLAEER 600 Query 303 HGIKPEFLKPRDLNPRFSLINAKHPLF--LLENKKC---IANDLHLAPKSQGETSPYVWV 357 +P D + F+++ +HP+ L + +AND L+P+ G +W+ Sbjct 601 GYCRPHV----DDSLSFNIVAGRHPVVEQALRRQAANPFVANDCDLSPQRDGGDGA-IWL 655 Query 358 LSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFS 417 L+GPN GGK+ ++ +IA++A+ G FV A I + +F +G + STF Sbjct 656 LTGPNMGGKSTFLRQNALIAILAQMGSFVPAGSAHIGVVDRLFSRVGASDDLARGRSTFM 715 Query 418 GHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSN 476 + + I QA E SL++LDE GT G+++A + +EY K + + THF Sbjct 716 VEMVETAAILNQAGEHSLVILDEIGRGTATFDGLSIAWAAVEYLHEKNRCRALFATHFHE 775 Query 477 LKTLADNDSRFFNGSMEFE--PHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKART 534 + L++ R N +M + + ++ +++ G +SY +++A GL ++ +AR Sbjct 776 MTALSEKLERLSNVTMRVKEWDNDVIFLHEVAKGAADRSYGVQVARLAGLPEAVVNRARD 835 Query 535 YY-----GSESERMENLLKELQLKRIEINEELTKQNLLTQKLDSEF 575 G S + + L+ +L L + + +E K + Q DSE Sbjct 836 VLHQLEAGETSGKADRLIDDLPLFSVMLQQEKPKPQI--QAKDSEL 879 >RecName: Full=DNA mismatch repair protein MutS [Brucella ovis ATCC 25840] Sequence ID: A5VN83.1 Length: 898 Range 1: 529 to 867 Score:108 bits(270), Expect:9e-23, Method:Compositional matrix adjust., Identities:88/346(25%), Positives:162/346(46%), Gaps:20/346(5%) Query 243 LAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVI 302 LA ++++ A + E I EL+ + + I +++ L+ FD A A Sbjct 529 LAELESKIANAADRALSIELAIFEELTAEAVAHADSIRAAASALSVFDVSTALAVLAEEQ 588 Query 303 HGIKPEFLKPRDLNPRFSLINAKHPLF--LLENKKC---IANDLHLAPKSQGETSPYVWV 357 +P D + F+++ +HP+ L + +AND L+P+ G +W+ Sbjct 589 GYCRPHV----DDSLSFNIVAGRHPVVEQALRRQAANPFVANDCDLSPQRDGGDGA-IWL 643 Query 358 LSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFS 417 L+GPN GGK+ ++ +IA++A+ G FV A I + +F +G + STF Sbjct 644 LTGPNMGGKSTFLRQNALIAILAQMGSFVPAGSAHIGVVDRLFSRVGASDDLARGRSTFM 703 Query 418 GHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSN 476 + + I QA E SL++LDE GT G+++A + +EY K + + THF Sbjct 704 VEMVETAAILNQAGEHSLVILDEIGRGTATFDGLSIAWAAVEYLHEKNRCRALFATHFHE 763 Query 477 LKTLADNDSRFFNGSMEFE--PHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKART 534 + L++ R N +M + + ++ +++ G +SY +++A GL ++ +AR Sbjct 764 MTALSEKLERLSNVTMRVKEWDNDVIFLHEVAKGAADRSYGVQVARLAGLPEAVVNRARD 823 Query 535 YY-----GSESERMENLLKELQLKRIEINEELTKQNLLTQKLDSEF 575 G S + + L+ +L L + + +E K + Q DSE Sbjct 824 VLHQLEAGETSGKADRLIDDLPLFSVMLQQEKPKPQI--QAKDSEL 867 >RecName: Full=DNA mismatch repair protein MutS [Brucella melitensis bv. 1 str. 16M] Sequence ID: Q8YES6.2 Length: 910 Range 1: 541 to 879 Score:108 bits(270), Expect:9e-23, Method:Compositional matrix adjust., Identities:88/346(25%), Positives:162/346(46%), Gaps:20/346(5%) Query 243 LAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVI 302 LA ++++ A + E I EL+ + + I +++ L+ FD A A Sbjct 541 LAELESKIANAADRALSIELAIFEELTAEAVAHADSIRAAASALSVFDVSTALAVLAEEQ 600 Query 303 HGIKPEFLKPRDLNPRFSLINAKHPLF--LLENKKC---IANDLHLAPKSQGETSPYVWV 357 +P D + F+++ +HP+ L + +AND L+P+ G +W+ Sbjct 601 GYCRPHV----DDSLSFNIVAGRHPVVEQALRRQAANPFVANDCDLSPQRDGGDGA-IWL 655 Query 358 LSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFS 417 L+GPN GGK+ ++ +IA++A+ G FV A I + +F +G + STF Sbjct 656 LTGPNMGGKSTFLRQNALIAILAQMGSFVPAGSAHIGVVDRLFSRVGASDDLARGRSTFM 715 Query 418 GHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSN 476 + + I QA E SL++LDE GT G+++A + +EY K + + THF Sbjct 716 VEMVETAAILNQAGEHSLVILDEIGRGTATFDGLSIAWAAVEYLHEKNRCRALFATHFHE 775 Query 477 LKTLADNDSRFFNGSMEFE--PHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKART 534 + L++ R N +M + + ++ +++ G +SY +++A GL ++ +AR Sbjct 776 MTALSEKLERLSNVTMRVKEWDNDVIFLHEVAKGAADRSYGVQVARLAGLPEAVVNRARD 835 Query 535 YY-----GSESERMENLLKELQLKRIEINEELTKQNLLTQKLDSEF 575 G S + + L+ +L L + + +E K + Q DSE Sbjct 836 VLHQLEAGETSGKADRLIDDLPLFSVMLQQEKPKPQI--QAKDSEL 879 >RecName: Full=DNA mismatch repair protein MutS [Thermus thermophilus HB27] Sequence ID: P61671.1 Length: 811 Range 1: 515 to 773 Score:107 bits(268), Expect:1e-22, Method:Compositional matrix adjust., Identities:75/275(27%), Positives:140/275(50%), Gaps:17/275(6%) Query 277 EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKC 336 E + ++ IL + D A + A V HG + +PR R + +HP+ +E + Sbjct 515 EALREAARILAELDVYAALAEVA-VRHG----YTRPR-FGERLRIRAGRHPV--VERRTA 566 Query 337 -IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQD 395 + NDL +A + + +++GPN GK+ ++ +IAL+A+ G FV ++AE+ Sbjct 567 FVPNDLEMAHE--------LVLVTGPNMAGKSTFLRQTALIALLAQIGSFVPAEEAELPL 618 Query 396 YENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMAR 455 ++ I+ +G + STF + ++ + ++A E SL+LLDE GT GVA+A Sbjct 619 FDGIYTRIGASDDLAGGKSTFMVEMEEVALVLKEATERSLVLLDEVGRGTSSLDGVAIAT 678 Query 456 STLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYA 515 + E ++ + TH+ L LA + + + + E L+ +++L G +SY Sbjct 679 ALAEALHERRCYTLFATHYFELTALALPRLKNLHVAAKEEEGGLVFYHQVLPGPASKSYG 738 Query 516 IELAERMGLNNNIIQKARTYYGSESERMENLLKEL 550 +E+AE GL ++++AR + + R E L+E+ Sbjct 739 VEVAEMAGLPKEVVERARALLSAMAARREGALEEV 773 >RecName: Full=DNA mismatch repair protein MutS [Thermus thermophilus HB8] Sequence ID: Q56239.3 Length: 819 Range 1: 523 to 781 Score:107 bits(268), Expect:1e-22, Method:Compositional matrix adjust., Identities:75/275(27%), Positives:140/275(50%), Gaps:17/275(6%) Query 277 EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKC 336 E + ++ IL + D A + A V HG + +PR R + +HP+ +E + Sbjct 523 EALREAARILAELDVYAALAEVA-VRHG----YTRPR-FGERLRIRAGRHPV--VERRTA 574 Query 337 -IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQD 395 + NDL +A + + +++GPN GK+ ++ +IAL+A+ G FV ++AE+ Sbjct 575 FVPNDLEMAHE--------LVLVTGPNMAGKSTFLRQTALIALLAQIGSFVPAEEAELPL 626 Query 396 YENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMAR 455 ++ I+ +G + STF + ++ + ++A E SL+LLDE GT GVA+A Sbjct 627 FDGIYTRIGASDDLAGGKSTFMVEMEEVALVLKEATERSLVLLDEVGRGTSSLDGVAIAT 686 Query 456 STLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYA 515 + E ++ + TH+ L LA + + + + E L+ +++L G +SY Sbjct 687 ALAEALHERRCYTLFATHYFELTALALPRLKNLHVAAKEEEGGLVFYHQVLPGPASKSYG 746 Query 516 IELAERMGLNNNIIQKARTYYGSESERMENLLKEL 550 +E+AE GL ++++AR + + R E L+E+ Sbjct 747 VEVAEMAGLPKEVVERARALLSAMAARREGALEEV 781 >RecName: Full=DNA mismatch repair protein MutS [Salinibacter ruber DSM 13855] Sequence ID: Q2S254.1 Length: 908 Range 1: 513 to 807 Score:107 bits(268), Expect:1e-22, Method:Compositional matrix adjust., Identities:86/307(28%), Positives:143/307(46%), Gaps:22/307(7%) Query 237 FIEPQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIART 296 ++ P+ M++ L A+ +E EQ + EL + ++E+L D Sbjct 513 YVTPELKEMEEKIL-TAEEKIETLEQELFNELRSQIAQQTGILQENAELLAHLDC----- 566 Query 297 KFAGVIH-GIKPEFLKPR-DLNPRFSLINAKHPLF---LLENKKCIANDLHLAPKSQGET 351 FAG+ + ++ +P D + +HP+ L I ND+ L P + Sbjct 567 -FAGLAEVAEQHDYTRPSVDDGLTIDIEEGRHPVVEQTLPPGDPFIPNDMALDPDDE--- 622 Query 352 SPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREE 411 V +++GPN GK+VA++ VG+I L+A+ G FV + A+I + IF +G N Sbjct 623 --QVLIITGPNMAGKSVALRQVGLIVLLAQVGSFVPAEAAQIGVVDRIFTRVGASDNLAA 680 Query 412 DLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK---KATV 468 STF + + I A SLIL DE GT G+++A + +EY + A Sbjct 681 GESTFLVEMNEAANILNNATARSLILFDEVGRGTSTFDGLSIAWAIVEYLHERPEVAART 740 Query 469 IITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNN 526 + TH+ L +AD R N ++ H +++ KL+ G SY IE+A+ GL + Sbjct 741 LFATHYHELNAMADRLERVHNYRIQVSEHEGEIVFLRKLIPGGADHSYGIEVAKMAGLPD 800 Query 527 NIIQKAR 533 +I +AR Sbjct 801 AVIARAR 807 >RecName: Full=DNA mismatch repair protein MutS [Nitrobacter hamburgensis X14] Sequence ID: Q1QQJ4.1 Length: 907 Range 1: 523 to 833 Score:107 bits(267), Expect:2e-22, Method:Compositional matrix adjust., Identities:85/316(27%), Positives:152/316(48%), Gaps:23/316(7%) Query 237 FIEPQALAMQ-----------QAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEI 285 FI Q LA Q +A++ A + E I L+ +D+ +++ Sbjct 523 FIHRQTLAGQVRFTTSELGEIEARIANAGDRALGLELEIFDRLAAVVVEAGDDLRAAAHA 582 Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKC----IANDL 341 Q D + K A + +PE D + F++ +HP+ K+ IAN Sbjct 583 FAQLDVAASLAKLATDENFTRPEV----DASLGFAIEGGRHPVVEQALKRAGQPFIANAC 638 Query 342 HLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFV 401 L+P G+TS +W+L+GPN GK+ ++ +IALMA+ G FV +A I + +F Sbjct 639 DLSP-GPGQTSGQIWLLTGPNMAGKSTFLRQNALIALMAQIGSFVPATRARIGMIDRLFS 697 Query 402 ELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYF 461 +G + STF + + I QA+E +L++LDE GT G+++A + +E+ Sbjct 698 RVGAADDLARGRSTFMVEMVETAVILNQASERALVILDEIGRGTATFDGLSIAWAAIEHL 757 Query 462 -SVKKATVIITTHFSNLKTLADNDSRFFNGSMEF-EPH-KLLPTYKLLNGIPGQSYAIEL 518 K + TH+ L L+ R FN ++ E H +++ +++L G +SY I++ Sbjct 758 HEANKCRALFATHYHELTALSAKLPRLFNATVRVKEWHGEVVFLHEVLPGAADRSYGIQV 817 Query 519 AERMGLNNNIIQKART 534 A+ GL +++ +A++ Sbjct 818 AKLAGLPPSVVARAKS 833 >RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS protein homolog 3 [Debaryomyces hansenii CBS767] Sequence ID: Q6BW83.2 Length: 1028 Range 1: 728 to 983 Score:106 bits(264), Expect:4e-22, Method:Compositional matrix adjust., Identities:73/267(27%), Positives:136/267(50%), Gaps:29/267(10%) Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPR--FSLINAKHPLFLLEN-----KKCIA 338 L+ FD +++ + + I + +P+ + + + N+++P+ +EN I+ Sbjct 728 LSTFDCLLSLS----AVSSINSNYARPKIVEDKQIIQMKNSRNPI--IENLSVNYSNYIS 781 Query 339 NDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYEN 398 ND++++ V +++GPN GGK+ +K V ++ +MA+ G ++ CD+A + +++ Sbjct 782 NDINISYDEDR-----VLIITGPNMGGKSTYVKQVALLVIMAQIGSYIPCDEATVGIFDS 836 Query 399 IFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTL 458 IF+ +G R N ++ STF + + I + SLI+LDE GT G+A+A S L Sbjct 837 IFIRMGARDNILQNQSTFMIEMLECSHILKNMTSNSLIILDEIGRGTGTNDGIAIAYSIL 896 Query 459 EYF--SVKKATVIITTHFSNLKTLADN----DSRFFNGSMEF-----EPHKLLPTYKLLN 507 Y +K + THF +L L D + + G E E +++ Y L+ Sbjct 897 NYLIEEPRKPLTLFITHFPSLHVLEDKFKGIATNYHMGFHEVSKSNQEFPEVVFLYNLVR 956 Query 508 GIPGQSYAIELAERMGLNNNIIQKART 534 G+ G SY + +A+ G+ N+II A T Sbjct 957 GVVGNSYGLNVAKLAGIPNSIINNAYT 983 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Helicobacter pylori 26695] Sequence ID: O25338.1 Length: 762 Range 1: 119 to 520 Score:105 bits(263), Expect:5e-22, Method:Compositional matrix adjust., Identities:105/423(25%), Positives:198/423(46%), Gaps:38/423(8%) Query 142 HMELHAKLNKSV------------DMDGNILSSASPELHSARSRLEHAKRKIVEQLDEIL 189 H++ H +LN V D +G I A+ L + L K++ V+ + Sbjct 119 HLKFHERLNAIVLPPFFNDLIALFDDEGKIKQGANATLDALNESLNRLKKESVKIIHHYA 178 Query 190 KKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQ 249 + +++ L D L+ G+ L +++ I+G+ S +G ++ P++ + Sbjct 179 RSKELAPYLVDTQSHLKHGYECLLLKSGFSGAIKGVVLERSANG-YFYLLPESAQKIAQK 237 Query 250 LEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFD---NIIARTKFAGVIHGIK 306 + + N+++ + + LS + + +L + +FD ++ AR FA Sbjct 238 IAQIGNEIDCCIVEMCQTLSHS---LQKHLLFLKFLFKEFDFLDSLQARLNFAK---AYN 291 Query 307 PEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGK 366 EF+ P + L N HP+ L E K L+L + E S + ++G NAGGK Sbjct 292 LEFVMPSFTQKKMILENFSHPI-LKEPK-----PLNL----KFEKS--MLAVTGVNAGGK 339 Query 367 TVAMKTVGIIALMAK--AGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIK 424 T+ +K++ A ++K + ++ + I ++ I + D QN ++STF+G + Q Sbjct 340 TMLLKSLLSAAFLSKHLIPMKINAHHSIIPYFKEIHAIINDPQNSANNISTFAGRMKQFS 399 Query 425 RISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADND 484 + + N L+ +DE +GTD ++ ++ LE + +IITTH L L + Sbjct 400 ALLSKEN--MLLGVDEIELGTDADEASSLYKTLLEKLLKQNNQIIITTHHKRLSVLMAEN 457 Query 485 SRFFNGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERME 544 + ++ K PTY L G+ G+SYA E A R G+ + +I+KA+T+YG + E++ Sbjct 458 KEVELLAALYDEEKERPTYTFLKGVIGKSYAFETALRYGVPHFLIEKAKTFYGEDKEKLN 517 Query 545 NLL 547 L+ Sbjct 518 VLI 520 >RecName: Full=DNA mismatch repair protein MutS [Thermus caldophilus] Sequence ID: Q9ZIX6.1 Length: 817 Range 1: 521 to 779 Score:105 bits(263), Expect:5e-22, Method:Compositional matrix adjust., Identities:74/274(27%), Positives:137/274(50%), Gaps:15/274(5%) Query 277 EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKC 336 E + ++ IL + D A + A V HG + +PR R + +HP+ + Sbjct 521 EALREAARILAELDVYAALAEVA-VRHG----YTRPR-FGERLRIRAGRHPV-VRRRTAF 573 Query 337 IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDY 396 + NDL +A + + ++GPN GK+ ++ +IAL+A+ G FV ++AE+ + Sbjct 574 VPNDLEMAHE--------LVRVTGPNMAGKSTFLRQTALIALLAQIGSFVPAEEAELPLF 625 Query 397 ENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARS 456 + I+ +G + STF + ++ + ++A E SL+LLDE GT GVA+A + Sbjct 626 DGIYTRIGASDDLAGGKSTFMVEMEEVALVLKEATERSLVLLDEVGRGTSSLDGVAIATA 685 Query 457 TLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYAI 516 E ++ + TH+ L LA + + + + E L+ +++L G +SY + Sbjct 686 LAEALHERRCYTLFATHYFELTALALPRLKNLHVAAKEEEGGLVFYHQVLPGPASKSYGV 745 Query 517 ELAERMGLNNNIIQKARTYYGSESERMENLLKEL 550 E+AE GL ++++AR + + R E L+E+ Sbjct 746 EVAEMAGLPKEVVERARALLSAMAARREGALEEV 779 >RecName: Full=DNA mismatch repair protein MutS [Staphylococcus epidermidis RP62A] Sequence ID: Q5HPP5.1 Length: 873 >RecName: Full=DNA mismatch repair protein MutS [Staphylococcus epidermidis ATCC 12228] Sequence ID: Q8CPF0.1 Length: 873 Range 1: 532 to 778 Score:105 bits(263), Expect:6e-22, Method:Compositional matrix adjust., Identities:68/257(26%), Positives:134/257(52%), Gaps:15/257(5%) Query 283 SEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF--LLENKKCIAND 340 ++I+++ D + + + A + +KP F + L+ L N++HP+ +++ + ND Sbjct 532 AKIISELDCLQSFAEIAQKYNYVKPTFSDDKVLH----LENSRHPVVERVMDYNDYVPND 587 Query 341 LHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIF 400 HL ++ ++++++GPN GK+ M+ V II++MA+ G +V CD A + ++ IF Sbjct 588 CHLDDET------FIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCDSATLPIFDQIF 641 Query 401 VELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEY 460 +G + STF + + ++ A E SLI+ DE GT G+A+A++ +EY Sbjct 642 TRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGTSTYDGLALAQAMIEY 701 Query 461 FS-VKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIE 517 + A + +TH+ L +L N + ++ L+ +K+ +G SY I+ Sbjct 702 VAQTSHAKTLFSTHYHELTSLDQMLKCLKNVHVAANEYQGELIFLHKVKDGAVDDSYGIQ 761 Query 518 LAERMGLNNNIIQKART 534 +A+ L N +I +A+ Sbjct 762 VAKLADLPNEVIDRAQV 778 >RecName: Full=Endonuclease MutS2; AltName: Full=Ribosome-associated protein quality control-upstream factor; Short=RQC-upstream factor; Short=RqcU [Helicobacter pylori J99] Sequence ID: Q9ZLL4.1 Length: 762 Range 1: 98 to 520 Score:105 bits(262), Expect:6e-22, Method:Compositional matrix adjust., Identities:109/446(24%), Positives:205/446(45%), Gaps:42/446(9%) Query 121 YEKSRATKYPNLFNLSNDLKP--HMELHAKLNKSV------------DMDGNILSSASPE 166 YE + +Y + L N KP H++ H +LN + D +G I A+ Sbjct 98 YEIVKRLRY--IVVLQNAFKPFTHLKFHERLNAIILPPFFNDLILLLDDEGQIKQGANAT 155 Query 167 LHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYVLPIRADRKSGIEGIP 226 L + L K++ + + +++ L D L+ G+ L +++ S I+G+ Sbjct 156 LDALNESLNRLKKESTKIIHHYAHSKELAPYLVDTQSHLKHGYECLLLKSGFSSAIKGVV 215 Query 227 RGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEIL 286 S +G ++ P++ ++ + N+++ + + LS+ + + +L + Sbjct 216 LERSANG-YFYLLPESAQKIAQKIAQIGNEIDCCIVEMCQTLSRS---LQKHLLFLKFLF 271 Query 287 TQFD---NIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHL 343 +FD ++ AR FA EF+ P + L N HP+ L E K L+L Sbjct 272 KEFDFLDSLQARLNFAK---AYNLEFVMPSFTQKKMILENFSHPI-LKEPK-----PLNL 322 Query 344 APKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAK--AGLFVSCDKAEIQDYENIFV 401 + E S + ++G NAGGKT+ +K++ A ++K + ++ + I + I Sbjct 323 ----KFEKS--MLAVTGVNAGGKTMLLKSLLSAAFLSKHLIPMKINAHHSTIPYFREIHA 376 Query 402 ELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYF 461 + D QN ++STF+G + Q + + N L+ +DE +GTD ++ ++ LE Sbjct 377 IINDPQNSANNISTFAGRMKQFSALLSKEN--MLLGVDEIELGTDADEASSLYKTLLEKL 434 Query 462 SVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYAIELAER 521 + ++ITTH L L + + ++ K PTY L G+ G+SYA E A R Sbjct 435 LKQNNQIVITTHHKRLSVLMAENKEVELLAALYDEEKERPTYTFLKGVIGKSYAFETALR 494 Query 522 MGLNNNIIQKARTYYGSESERMENLL 547 G+ +I+KA+ +YG + E++ L+ Sbjct 495 YGVPPFLIEKAKAFYGEDKEKLNVLI 520 >RecName: Full=DNA mismatch repair protein MutS [Thermotoga maritima MSB8] Sequence ID: P74926.2 Length: 793 Range 1: 407 to 763 Score:104 bits(260), Expect:1e-21, Method:Compositional matrix adjust., Identities:92/373(25%), Positives:181/373(48%), Gaps:20/373(5%) Query 164 SPELHSARSRLEHAKRKIVEQLDEILKKQDIRN--ALQDDVWMLRDGHYVLPIRADRKSG 221 S EL R LEHA+ ++ E ++ ++ I+ + V+ G+Y+ +A+ Sbjct 407 SSELDEYRDLLEHAEERLKEFEEKERERTGIQKLRVGYNQVF----GYYIEVTKANLDKI 462 Query 222 IEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILS 281 + R + S FI P+ L + ++ A+ +E E+ + + + ++ E +L Sbjct 463 PDDYERKQTLVNSERFITPE-LKEFETKIMAAKERIEELEKELFKSVCEEVKKHKEVLLE 521 Query 282 SSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDL 341 SE L + D + + + +++ + KP R + +HP+ + + ND+ Sbjct 522 ISEDLAKIDAL-STLAYDAIMYN----YTKPVFSEDRLEIKGGRHPVVERFTQNFVENDI 576 Query 342 HLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFV 401 ++ + V++GPN GK+ ++ VG+I+LMA+ G FV KA + ++ IF Sbjct 577 YM------DNEKRFVVITGPNMSGKSTFIRQVGLISLMAQIGSFVPAQKAILPVFDRIFT 630 Query 402 ELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYF 461 +G R + STF + ++ I ++ SL+LLDE GT GV++A + E Sbjct 631 RMGARDDLAGGRSTFLVEMNEMALILLKSTNKSLVLLDEVGRGTSTQDGVSIAWAISEEL 690 Query 462 SVKKATVIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIELA 519 + V+ THF+ L L + + N ++ E ++ T+K+++G+ +SY IE+A Sbjct 691 IKRGCKVLFATHFTELTELEKHFPQVQNKTILVKEEGKNVIFTHKVVDGVADRSYGIEVA 750 Query 520 ERMGLNNNIIQKA 532 + G+ + +I +A Sbjct 751 KIAGIPDRVINRA 763 >RecName: Full=DNA mismatch repair protein Msh6 [Dictyostelium discoideum] Sequence ID: Q55GU9.1 Length: 1260 Range 1: 954 to 1204 Score:104 bits(260), Expect:2e-21, Method:Compositional matrix adjust., Identities:75/255(29%), Positives:125/255(49%), Gaps:12/255(4%) Query 286 LTQFDNIIA--RTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHP-LFLLENKKCIANDLH 342 L+Q D +++ + F I +P F+ D + + +HP ++ I ND+ Sbjct 954 LSQLDCLLSLYKVSFQSSIQMCRPLFVS-SDQRGFIDVKDMRHPCIYSKSGDDFIPNDIS 1012 Query 343 LAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVE 402 L ++ P + VL+GPN GGK+ ++ I+ +MA+ G +VS E+ + IF Sbjct 1013 LNTENN---PPSLMVLTGPNMGGKSTLLRQSCILVIMAQMGCYVSASSCEMSIVDRIFTR 1069 Query 403 LGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFS 462 LG N STF LA+ + + A + SL++LDE GT G ++A S L Y + Sbjct 1070 LGANDNILAGQSTFMVELAETSAVLKYATKRSLVILDELGRGTSTFDGYSIAYSVLNYLA 1129 Query 463 VK-KATVIITTHFSNLK---TLAD-NDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYAIE 517 K ++ I TH+ +L T+ D + + ++ E K++ YKL +G+ SY + Sbjct 1130 TKVQSMCIFATHYQSLAYEPTVRDLISTAYMTCHVDEEAKKVIFLYKLASGVCPNSYGLH 1189 Query 518 LAERMGLNNNIIQKA 532 +A GL II KA Sbjct 1190 VASMAGLPREIITKA 1204 >RecName: Full=DNA mismatch repair protein MutS [Bradyrhizobium sp. BTAi1] Sequence ID: A5ETJ3.1 Length: 910 Range 1: 561 to 836 Score:103 bits(258), Expect:2e-21, Method:Compositional matrix adjust., Identities:77/281(27%), Positives:136/281(48%), Gaps:12/281(4%) Query 261 EQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFS 320 E I L + +D+ +++ D A K A + I+PE D + F+ Sbjct 561 ELEIFDRLCGQALAIGDDLRAAAHGFAMLDVATALAKLAVDDNYIRPEV----DGSLGFA 616 Query 321 LINAKHPL----FLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGII 376 + +HP+ E + IAN L+P + G S +W+L+GPN GK+ ++ +I Sbjct 617 IEGGRHPVVEQALKREGQPFIANSCDLSP-TPGHKSGQLWLLTGPNMAGKSTFLRQNALI 675 Query 377 ALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLI 436 AL+A+ G FV +A I + +F +G + STF + + I QA E +L+ Sbjct 676 ALLAQIGSFVPATRARIGIVDRLFSRVGAADDLARGRSTFMVEMVETAAILNQAGERALV 735 Query 437 LLDEGFVGTDPAIGVAMARSTLEYF-SVKKATVIITTHFSNLKTLADNDSRFFNGSMEF- 494 +LDE GT G+++A + +E+ + + TH+ L LA R FN ++ Sbjct 736 ILDEIGRGTATFDGLSIAWAAIEHLHESNRCRTLFATHYHELTALAAKLPRLFNATVRVK 795 Query 495 EPH-KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKART 534 E H ++ +++L G +SY I++A+ GL +I +A++ Sbjct 796 EWHGDVVFLHEVLPGSADRSYGIQVAKLAGLPPAVISRAKS 836 >RecName: Full=DNA mismatch repair protein MutS [Bradyrhizobium sp. ORS 278] Sequence ID: A4YKQ0.1 Length: 916 Range 1: 567 to 892 Score:103 bits(257), Expect:3e-21, Method:Compositional matrix adjust., Identities:85/334(25%), Positives:159/334(47%), Gaps:24/334(7%) Query 261 EQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFS 320 E I L + +D+ +++ D A K A + ++PE D + F+ Sbjct 567 ELEIFDRLCAQALAIGDDLRAAAHGFAMLDVATALAKLALDDNYVRPEV----DGSLGFA 622 Query 321 LINAKHPL----FLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGII 376 + +HP+ E + IAN L+P + G S +W+L+GPN GK+ ++ +I Sbjct 623 IEGGRHPVVEQSLKREGQPFIANSCDLSP-TPGHKSGQLWLLTGPNMAGKSTFLRQNALI 681 Query 377 ALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLI 436 AL+A+ G FV +A I + +F +G + STF + + I QA E +L+ Sbjct 682 ALLAQIGSFVPASRARIGIVDRLFSRVGAADDLARGRSTFMVEMVETAAILNQAGERALV 741 Query 437 LLDEGFVGTDPAIGVAMARSTLEYF-SVKKATVIITTHFSNLKTLADNDSRFFNGSMEFE 495 +LDE GT G+++A + +E+ + + TH+ L LA R FN ++ + Sbjct 742 ILDEIGRGTATFDGLSIAWAAIEHLHESNRCRTLFATHYHELTALAAKLPRLFNATVRVK 801 Query 496 PHK--LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGS--ESERMEN---LLK 548 + ++ +++L G +SY I++A+ GL +I +A++ ++R +N L+ Sbjct 802 EWQGDVVFLHEVLPGSADRSYGIQVAKLAGLPPAVISRAKSVLAKLEAADRGQNARALVD 861 Query 549 ELQL----KRIEINEELTKQNLLTQKLDSEFKSL 578 +L L R + ++K+ T++L + K L Sbjct 862 DLPLFAVPSRAAVEPAMSKE---TEELIAAVKDL 892 >RecName: Full=DNA mismatch repair protein MutS [Bartonella quintana str. Toulouse] Sequence ID: Q6G0X1.1 Length: 911 Range 1: 570 to 902 Score:102 bits(255), Expect:5e-21, Method:Compositional matrix adjust., Identities:86/339(25%), Positives:160/339(47%), Gaps:30/339(8%) Query 274 LVHED------ILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPR-DLNPRFSLINAKH 326 LVHE I ++E L D +A + A + E+ +P+ D + F + +H Sbjct 570 LVHEITEQVDFIRKAAEALAILDVSVALARLAE-----EQEYCRPKIDQSLTFRITAGRH 624 Query 327 PLFLLENKK-----CIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAK 381 P+ +K +AN+ L+ + + + +W+L+GPN GGK+ ++ +I +MA+ Sbjct 625 PVVEQALRKQAAEPFVANNCDLSVQKNHQYAA-IWLLTGPNMGGKSTFLRQNALITIMAQ 683 Query 382 AGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEG 441 G FV A I + +F +G + STF + + I A+ SL++LDE Sbjct 684 MGSFVPASSAHIGVVDRLFSRVGASDDLARGRSTFMMEMVETATILNHASSHSLVILDEI 743 Query 442 FVGTDPAIGVAMARSTLEYF-SVKKATVIITTHFSNLKTLADNDSRFFNGSMEFE--PHK 498 GT G+++A + +EY V + I+ THF + L + R +N +M+ + Sbjct 744 GRGTSTFDGLSIAWAAVEYLHEVNQCRAILATHFHEMTALTEKLDRLYNVTMKVKNWDGD 803 Query 499 LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYY-----GSESERMENLLKELQLK 553 ++ ++++ G +SY +++A+ GL +I +A G + + L+ +L L Sbjct 804 VVFLHEVMPGAADRSYGVQVAKLAGLPTAVITRATDVLHQLEQGETAGKGNKLIDDLPLF 863 Query 554 RIE----INEELTKQNLLTQKLDSEFKSLKNEKEQLSEL 588 ++ INEE K +L + L + + + KE L L Sbjct 864 SLKTTSLINEETNKHCMLHEALKNIYPDELSPKEALEVL 902 >RecName: Full=DNA mismatch repair protein MutS [Rhodopseudomonas palustris BisA53] Sequence ID: Q07V29.1 Length: 906 Range 1: 558 to 833 Score:102 bits(253), Expect:8e-21, Method:Compositional matrix adjust., Identities:72/281(26%), Positives:142/281(50%), Gaps:12/281(4%) Query 261 EQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFS 320 E I +L+ +D+ ++++ D +A K A + ++PE D + F+ Sbjct 558 ELEIFEKLTAMVIAATDDLRAAAQAFATLDVTLALAKLAIDDNYVRPEV----DGSLSFA 613 Query 321 LINAKHPL----FLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGII 376 + +HP+ + + IAN L+P ++S +W+++GPN GK+ ++ +I Sbjct 614 IEGGRHPVVEQALKRDGQPFIANACDLSP-GPAQSSGQIWLITGPNMAGKSTFLRQNALI 672 Query 377 ALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLI 436 AL+A+ G FV +A I + +F +G + STF + + I QA+E +L+ Sbjct 673 ALLAQIGAFVPAARARIGIVDRLFSRVGAADDLARGRSTFMVEMVETAVILNQASERALV 732 Query 437 LLDEGFVGTDPAIGVAMARSTLEYF-SVKKATVIITTHFSNLKTLADNDSRFFNGSMEF- 494 +LDE GT G+++A + +E+ + + TH+ L L+ R FN ++ Sbjct 733 ILDEIGRGTATFDGLSIAWAAIEHLHESNRCRALFATHYHELTALSGKLPRVFNATVRVK 792 Query 495 EPH-KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKART 534 E H +++ ++++ G +SY I++A+ GL ++I +A+T Sbjct 793 EWHGEVVFLHEVMPGSADRSYGIQVAKLAGLPPSVIARAKT 833 >RecName: Full=DNA mismatch repair protein MutS [Parvibaculum lavamentivorans DS-1] Sequence ID: A7HZ64.1 Length: 908 Range 1: 605 to 843 Score:101 bits(252), Expect:1e-20, Method:Compositional matrix adjust., Identities:66/241(27%), Positives:125/241(51%), Gaps:10/241(4%) Query 309 FLKPR-DLNPRFSLINAKHPL----FLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNA 363 +++PR D + F + +HP+ + + ND L+ +S G ++W+L+GPN Sbjct 605 YVRPRLDASFAFDIRGGRHPVVEAALARTGQAFVPNDTSLSAESGG--GKHIWLLTGPNM 662 Query 364 GGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQI 423 GK+ ++ +IA+MA+ G FV D+A I + +F +G + STF + + Sbjct 663 AGKSTFLRQNALIAIMAQMGSFVPADEAHIGVVDRLFSRVGAADDLARGRSTFMVEMVET 722 Query 424 KRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYF-SVKKATVIITTHFSNLKTLAD 482 I QA E SL++LDE GT G+++A +T+E+ V K+ + TH+ L L++ Sbjct 723 AAILNQAGERSLVILDEIGRGTATFDGLSIAWATVEHLHGVNKSRALFATHYHELTALSE 782 Query 483 NDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSES 540 + N +M + + ++ +++ G +SY I++A+ GL +I +A++ + Sbjct 783 KLAHLANATMRVKEWQGDVVFLHEVAPGAADRSYGIQVAKLAGLPAPVIARAQSVLAALE 842 Query 541 E 541 E Sbjct 843 E 843 >RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS protein homolog 3 [Candida albicans SC5314] Sequence ID: Q59Y41.1 Length: 1037 Range 1: 748 to 1000 Score:101 bits(251), Expect:2e-20, Method:Compositional matrix adjust., Identities:70/258(27%), Positives:129/258(50%), Gaps:20/258(7%) Query 307 PEFLKPRDLNPRFSLI--NAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAG 364 P + +P ++ +++ A+HP +AND+++ + V +++GPN G Sbjct 748 PNYTRPTLIDDDLTILVKQARHPTIEQLRPNYVANDININIEYDKNR---VLIITGPNMG 804 Query 365 GKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIK 424 GK+ +KTV ++ +M + G ++ C A + +++IF+ +G N + STF + Q K Sbjct 805 GKSSYVKTVALLTVMTQIGCYLPCQNATMGIFDSIFIRMGANDNILKGYSTFMMEMLQCK 864 Query 425 RISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYF--SVKKATVIITTHFSNLKTLAD 482 I + SLI+LDE GT G+++A S L+Y S K V+ TH+ ++ L Sbjct 865 NIISMMSNRSLIILDEIGRGTGTIDGISLAYSILKYLIESEFKPLVLFITHYPSIHVLEQ 924 Query 483 N--DSRFFNGSMEFEPHK---------LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQK 531 + N M ++ K ++ Y L G+ SY + +A+ G++++II++ Sbjct 925 EYPNQLVVNYHMGYQEIKNNTPGEIPEIIFLYNLCRGVVNNSYGLNVAKLAGISHDIIKQ 984 Query 532 ARTYYGSESERMENLLKE 549 A Y SE + + LKE Sbjct 985 A--YRVSEKVKSDIELKE 1000 >RecName: Full=DNA mismatch repair protein MSH2; AltName: Full=MutS protein homolog 2 [Saccharomyces cerevisiae S288C] Sequence ID: P25847.2 Length: 964 Range 1: 591 to 963 Score:100 bits(250), Expect:2e-20, Method:Compositional matrix adjust., Identities:108/403(27%), Positives:186/403(46%), Gaps:52/403(12%) Query 246 QQAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGI 305 QQ+ L + ++ + + +LS L H D+++S A T I I Sbjct 591 QQSALVREIINITLTYTPVFEKLS--LVLAHLDVIAS----------FAHTSSYAPIPYI 638 Query 306 KPEFLKPRDLNPRFSLINAKHPLFLLENK-KCIANDLHLAPKSQGETSPYVWVLSGPNAG 364 +P+ L P D R LI+++HP+ +++ I+ND+ L +G+ +++GPN G Sbjct 639 RPK-LHPMDSERRTHLISSRHPVLEMQDDISFISNDVTLE-SGKGD----FLIITGPNMG 692 Query 365 GKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIK 424 GK+ ++ VG+I+LMA+ G FV C++AEI + I +G ++ + +STF + + Sbjct 693 GKSTYIRQVGVISLMAQIGCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILETA 752 Query 425 RISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKAT-VIITTHFSNLKTLADN 483 I + A++ SLI++DE GT G +A + E+ + K + THF L L++ Sbjct 753 SILKNASKNSLIIVDELGRGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTELSEK 812 Query 484 DSRFFNGSMEFEPHKLLP-----------TYKLLNGIPGQSYAIELAERMGLNNNIIQKA 532 N + K L YK+ GI QS+ I +AE + I++ A Sbjct 813 LPNVKNMHVVAHIEKNLKEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMA 872 Query 533 RTYYGSESERMENLLKELQLKRIEINEELTKQNLLTQKLDS---EFKSL------KNEKE 583 + R N L +L+ NE+L K L Q+++ K+L K ++E Sbjct 873 K--------RKANELDDLKTN----NEDLKKAKLSLQEVNEGNIRLKALLKEWIRKVKEE 920 Query 584 QLSELRGDLVENYRNKLQKRLNAFENRLEIRERQFEKQKETLL 626 L + E ++K+Q+ L A N E + K + LL Sbjct 921 GLHDPSKITEEASQHKIQELLRAIANEPEKENDNYLKYIKALL 963 >RecName: Full=DNA mismatch repair protein MutS [Escherichia coli SE11] Sequence ID: B6I6B9.1 Length: 853 Range 1: 533 to 790 Score:100 bits(249), Expect:3e-20, Method:Compositional matrix adjust., Identities:74/268(28%), Positives:128/268(47%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H E + S+ L + D ++ + A ++ I P F+ P + +HP+ Sbjct 533 DLLLPHLEALQQSASALAELDVLVNLAERAYTLNYICPTFID----KPGIRITEGRHPVV 588 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IALMA G +V Sbjct 589 EQVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALMAYIGSYVPA 642 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 K EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 643 QKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTY 702 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 703 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 762 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 763 QDGAASKSYGLAVAALAGVPKEVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Rhodopseudomonas palustris HaA2] Sequence ID: Q2J2S1.1 Length: 911 Range 1: 578 to 837 Score:100 bits(249), Expect:3e-20, Method:Compositional matrix adjust., Identities:68/265(26%), Positives:133/265(50%), Gaps:12/265(4%) Query 277 EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKC 336 ED+ +++ D A K A + ++PE D + F++ +HP+ K+ Sbjct 578 EDLRAAAHAFALLDVATALAKLASDDNYVRPEV----DQSLSFAIEGGRHPVVEQALKRA 633 Query 337 ----IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAE 392 IAN L+P + S +W+L+GPN GK+ ++ +IAL+A+ G +V +A Sbjct 634 GEPFIANACDLSP-GPAQASGQIWLLTGPNMAGKSTFLRQNALIALLAQTGSYVPAARAR 692 Query 393 IQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVA 452 I + +F +G + STF + + I QA E +L++LDE GT G++ Sbjct 693 IGIVDRLFSRVGAADDLARGRSTFMVEMVETAAILNQATERALVILDEIGRGTATFDGLS 752 Query 453 MARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPHK--LLPTYKLLNGI 509 +A + +E+ + + + TH+ L L+ R FN ++ + + ++ +++L G Sbjct 753 IAWAAIEHLHEQNRCRALFATHYHELTALSAKLPRLFNATVRVKEWRGEVVFLHEVLPGS 812 Query 510 PGQSYAIELAERMGLNNNIIQKART 534 +SY I++A+ GL +++ +A++ Sbjct 813 ADRSYGIQVAKLAGLPASVVARAKS 837 >RecName: Full=DNA mismatch repair protein MutS [Bartonella bacilliformis KC583] Sequence ID: A1UU95.1 Length: 914 Range 1: 436 to 837 Score:100 bits(248), Expect:3e-20, Method:Compositional matrix adjust., Identities:101/416(24%), Positives:182/416(43%), Gaps:42/416(10%) Query 145 LHAKLNKSVDMDGNILSS----ASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQD 200 LH +LN+++ D +L P H ++ R + ++ I+ + +R A + Sbjct 436 LHIRLNQALTDDLPLLKRDGGFIRPNYHQELDKM----RNLRDESRRIIAELQVRYAKET 491 Query 201 DVWMLRDGH-----YVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALA-------MQQA 248 D+ L+ H Y + + + S + P+ + FI Q +A + A Sbjct 492 DIKTLKIKHNNVLGYFIEVTTLQASALTNNPQAKAH-----FIHRQTIANAMRFTTTELA 546 Query 249 QLEK----AQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHG 304 +LE A N V E I L + + I SE L D +A A Sbjct 547 ELESRIAHAANHVITLELEIFDMLVNEIIAQADFIRKVSEALAVLDVSVALAYLAEEQGY 606 Query 305 IKPEFLKPRDLNPRFSLINAKHPLFLLENKK-----CIANDLHLAPKSQGETSPYVWVLS 359 +P D + F + +HP+ +K +AND +L+ K+ + + +W+L+ Sbjct 607 CRPII----DNSLTFHITAGRHPVVEQALRKQAIEPFVANDCNLSAKNNHQYAA-IWLLT 661 Query 360 GPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGH 419 GPN GGK+ ++ +IA+MA+ G FV A I + +F +G + STF Sbjct 662 GPNMGGKSTFLRQNALIAIMAQMGSFVPATSAHIGVVDRLFSRVGASDDLARGRSTFMME 721 Query 420 LAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYF-SVKKATVIITTHFSNLK 478 + + I A+ SL++LDE GT G+++A + +EY V I+ THF + Sbjct 722 MVETATILNHASSHSLVILDEIGRGTSTFDGLSIAWAAVEYLHEVNHCRAILATHFHEMT 781 Query 479 TLADNDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKA 532 L R N +M+ + + ++ +++ G +SY +++A+ GL +I +A Sbjct 782 ALTKKLDRLHNVTMKVKNWEGNVIFLHEVTEGAADRSYGVQVAKLAGLPEEVITRA 837 >RecName: Full=DNA mismatch repair protein Msh2; AltName: Full=MutS protein homolog 2 [Chlorocebus aethiops] Sequence ID: Q5XXB5.1 Length: 933 Range 1: 540 to 876 Score:100 bits(248), Expect:3e-20, Method:Compositional matrix adjust., Identities:91/345(26%), Positives:160/345(46%), Gaps:32/345(9%) Query 234 STVFIEPQALAMQQAQL-----EKAQNDVEVEEQR--ILRELSKDCYLVHEDILSSSEIL 286 STV I+ + ++L E +N E EE + I++E+ E + + +++L Sbjct 540 STVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVL 599 Query 287 TQFDNIIARTKFAGVIHGIKPEFLKPRDL---NPRFSLINAKHPLFLLENK-KCIANDLH 342 Q D +++ FA V +G +++P L R L ++H ++++ I ND++ Sbjct 600 AQLDAVVS---FAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEITFIPNDIY 656 Query 343 LAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVE 402 Q +++GPN GGK+ ++ G+I LMA+ G FV C+ AE+ + I Sbjct 657 FEKDKQ-----MFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILAR 711 Query 403 LGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFS 462 +G ++ + +STF + + I A + SLI++DE GT G +A + EY + Sbjct 712 VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA 771 Query 463 VK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPT--YKLLNGIPGQSYAIELA 519 K A + THF L LA+ N + + T Y++ G+ QS+ I +A Sbjct 772 TKIGAFCMFATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVA 831 Query 520 ERMGLNNNIIQKAR---------TYYG-SESERMENLLKELQLKR 554 E ++I+ A+ Y G S+ ME K+ L+R Sbjct 832 ELANFPKHVIECAKQKALELEEFQYIGESQGYDMEPAAKKCYLER 876 >RecName: Full=DNA mismatch repair protein MutS [Mesorhizobium japonicum MAFF 303099] Sequence ID: Q98C21.1 Length: 909 Range 1: 616 to 872 Score:100 bits(248), Expect:3e-20, Method:Compositional matrix adjust., Identities:69/259(27%), Positives:125/259(48%), Gaps:16/259(6%) Query 319 FSLINAKHPLFLLENKKC-----IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 F + +HP+ ++ +AND L+P+ + +W+L+GPN GGK+ ++ Sbjct 616 FEISGGRHPVVEQALRRSGEGPFVANDCDLSPEGNAKNG-AIWLLTGPNMGGKSTFLRQN 674 Query 374 GIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANEL 433 +IA++A+ G FV A I + +F +G + STF + + I QA E Sbjct 675 ALIAILAQTGSFVPATSAHIGVVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQAGER 734 Query 434 SLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSM 492 +L++LDE GT G+++A + +EY K + I THF + +LA +R N +M Sbjct 735 ALVILDEIGRGTATFDGLSIAWAAVEYLHEKNRCRAIFATHFHEMTSLAGKLARLHNVTM 794 Query 493 ---EFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYY-----GSESERME 544 E+E + +++ G +SY +++A GL ++ +A+ G S + Sbjct 795 RVKEWEGDVVF-LHEVGKGAADRSYGVQVARLAGLPEAVVDRAKQVLHQLEEGEVSGKTN 853 Query 545 NLLKELQLKRIEINEELTK 563 L+ +L L + + E K Sbjct 854 RLVDDLPLFSVAMKREAPK 872 >RecName: Full=DNA mismatch repair protein MutS [Thermus aquaticus] Sequence ID: Q56215.1 Length: 811 Range 1: 515 to 770 Score:99.8 bits(247), Expect:4e-20, Method:Compositional matrix adjust., Identities:69/271(25%), Positives:132/271(48%), Gaps:15/271(5%) Query 277 EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKC 336 E + ++ IL + D A + A ++ +++PR R + +HP+ + + Sbjct 515 EALREAARILAELDVYAALAEVA-----VRYGYVRPR-FGDRLQIRAGRHPV-VERRTEF 567 Query 337 IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDY 396 + NDL +A + + +++GPN GK+ ++ +IAL+A+ G FV ++A + + Sbjct 568 VPNDLEMAHE--------LVLITGPNMAGKSTFLRQTALIALLAQVGSFVPAEEAHLPLF 619 Query 397 ENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARS 456 + I+ +G + STF + ++ I ++A E SL+LLDE GT GVA+A + Sbjct 620 DGIYTRIGASDDLAGGKSTFMVEMEEVALILKEATENSLVLLDEVGRGTSSLDGVAIATA 679 Query 457 TLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYAI 516 E ++A + TH+ L L + + + E L+ +++L G +SY + Sbjct 680 VAEALHERRAYTLFATHYFELTALGLPRLKNLHVAAREEAGGLVFYHQVLPGPASKSYGV 739 Query 517 ELAERMGLNNNIIQKARTYYGSESERMENLL 547 E+A GL ++ +AR + + R E L Sbjct 740 EVAAMAGLPKEVVARARALLQAMAARREGAL 770 >RecName: Full=DNA mismatch repair protein MSH2; Short=AtMSH2; AltName: Full=MutS protein homolog 2 [Arabidopsis thaliana] Sequence ID: O24617.1 Length: 937 Range 1: 648 to 851 Score:99.8 bits(247), Expect:4e-20, Method:Compositional matrix adjust., Identities:66/209(32%), Positives:104/209(49%), Gaps:17/209(8%) Query 337 IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDY 396 I ND L +G++ + +++GPN GGK+ ++ VG+I LMA+ G FV CDKA I Sbjct 648 IPNDCRLM---RGKS--WFQIVTGPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISIR 702 Query 397 ENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARS 456 + IF +G + +STF + + I + A++ SLI++DE GT G +A + Sbjct 703 DCIFARVGAGDCQLRGVSTFMQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWA 762 Query 457 TLEYF-SVKKATVIITTHFSNLKTLADNDSRF-----------FNGSMEFEPHKLLPTYK 504 E+ VK+A + THF L LA +S + ++ E KL YK Sbjct 763 ICEHLVQVKRAPTLFATHFHELTALAQANSEVSGNTVGVANFHVSAHIDTESRKLTMLYK 822 Query 505 LLNGIPGQSYAIELAERMGLNNNIIQKAR 533 + G QS+ I +AE +++ AR Sbjct 823 VEPGACDQSFGIHVAEFANFPESVVALAR 851 >RecName: Full=DNA mismatch repair protein Msh2; Short=hMSH2; AltName: Full=MutS protein homolog 2 [Homo sapiens] Sequence ID: P43246.1 Length: 934 Range 1: 540 to 845 Score:99.8 bits(247), Expect:5e-20, Method:Compositional matrix adjust., Identities:83/314(26%), Positives:149/314(47%), Gaps:22/314(7%) Query 234 STVFIEPQALAMQQAQL-----EKAQNDVEVEEQR--ILRELSKDCYLVHEDILSSSEIL 286 STV I+ + ++L E +N E EE + I++E+ E + + +++L Sbjct 540 STVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVL 599 Query 287 TQFDNIIARTKFAGVIHGIKPEFLKPRDL---NPRFSLINAKHPLFLLENKKC-IANDLH 342 Q D +++ FA V +G +++P L R L ++H ++++ I ND++ Sbjct 600 AQLDAVVS---FAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVY 656 Query 343 LAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVE 402 Q +++GPN GGK+ ++ G+I LMA+ G FV C+ AE+ + I Sbjct 657 FEKDKQ-----MFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILAR 711 Query 403 LGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFS 462 +G ++ + +STF + + I A + SLI++DE GT G +A + EY + Sbjct 712 VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA 771 Query 463 VK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPT--YKLLNGIPGQSYAIELA 519 K A + THF L LA+ N + + T Y++ G+ QS+ I +A Sbjct 772 TKIGAFCMFATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVA 831 Query 520 ERMGLNNNIIQKAR 533 E ++I+ A+ Sbjct 832 ELANFPKHVIECAK 845 >RecName: Full=DNA mismatch repair protein MutS [Nitrobacter winogradskyi Nb-255] Sequence ID: Q3SVD4.1 Length: 888 Range 1: 551 to 815 Score:99.4 bits(246), Expect:5e-20, Method:Compositional matrix adjust., Identities:75/271(28%), Positives:136/271(50%), Gaps:19/271(7%) Query 277 EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPR-DLNPRFSLINAKHPLFLLENKK 335 ++I +++ Q D + K A I + +P D + F++ +HP+ K+ Sbjct 551 DEIRNAAHAFAQLDVAASFAKLA-----IDENYTRPDIDASLSFAIEGGRHPVVEQALKR 605 Query 336 C----IANDLHLAP-----KSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFV 386 IAN L+P + GE S +W+L+GPN GK+ ++ +IALMA+ G FV Sbjct 606 TGQPFIANACDLSPPPPPVEGSGE-SGQIWLLTGPNMAGKSTFLRQNALIALMAQVGSFV 664 Query 387 SCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTD 446 +A I + +F +G + STF + + I QA+E +L++LDE GT Sbjct 665 PASRARIGIIDRLFSRVGAADDLARGRSTFMVEMVETAVILNQASERALVILDEIGRGTA 724 Query 447 PAIGVAMARSTLEYF-SVKKATVIITTHFSNLKTLADNDSRFFNGSMEF-EPH-KLLPTY 503 G+++A +T+E+ + + TH+ L L+ R FN ++ E H +++ + Sbjct 725 TFDGLSIAWATIEHLHESNRCRALFATHYHELTALSAKLPRLFNATVRVKEWHGEVVFLH 784 Query 504 KLLNGIPGQSYAIELAERMGLNNNIIQKART 534 ++L G +SY I++A GL ++I +A++ Sbjct 785 EVLPGAADRSYGIQVARLAGLPPSVIARAKS 815 >RecName: Full=DNA mismatch repair protein MutS [Rhodopseudomonas palustris BisB18] Sequence ID: Q21CE8.2 Length: 905 Range 1: 572 to 831 Score:99.4 bits(246), Expect:6e-20, Method:Compositional matrix adjust., Identities:70/265(26%), Positives:135/265(50%), Gaps:12/265(4%) Query 277 EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPL----FLLE 332 +D+ +++ D +A K A + ++PE D + F++ +HP+ + Sbjct 572 DDLRAAAHGFAALDVTLALAKLAVDDNYVRPEV----DGSLSFAIEGGRHPVVEQALRRD 627 Query 333 NKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAE 392 + IAN L+P G+ S +W+++GPN GK+ ++ +IAL+A+ G FV +A Sbjct 628 GQPFIANACDLSP-GPGQQSGQIWLITGPNMAGKSTFLRQNALIALLAQIGSFVPASRAR 686 Query 393 IQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVA 452 I + +F +G + STF + + I QA+E +L++LDE GT G++ Sbjct 687 IGIVDRLFSRVGAADDLARGRSTFMVEMVETAVILNQASERALVILDEIGRGTATFDGLS 746 Query 453 MARSTLEYF-SVKKATVIITTHFSNLKTLADNDSRFFNGSMEF-EPH-KLLPTYKLLNGI 509 +A + +E+ + + TH+ L L+ R FN ++ E H ++ +++L G Sbjct 747 IAWAAIEHLHESNRCRSLFATHYHELTALSAKLPRLFNATVRVKEWHGDVVFLHEVLPGS 806 Query 510 PGQSYAIELAERMGLNNNIIQKART 534 +SY I++A+ GL ++I +A++ Sbjct 807 ADRSYGIQVAKLAGLPPSVITRAKS 831 >RecName: Full=DNA mismatch repair protein Msh2; AltName: Full=MutS protein homolog 2 [Bos taurus] Sequence ID: Q3MHE4.1 Length: 934 Range 1: 540 to 845 Score:99.4 bits(246), Expect:7e-20, Method:Compositional matrix adjust., Identities:82/314(26%), Positives:148/314(47%), Gaps:22/314(7%) Query 234 STVFIEPQALAMQQAQL-----EKAQNDVEVEEQR--ILRELSKDCYLVHEDILSSSEIL 286 STV I+ + ++L E +N E EE + I++E+ E + + +++L Sbjct 540 STVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQNAIVKEIVNISSGYVEPMQTLNDVL 599 Query 287 TQFDNIIARTKFAGVIHGIKPEFLKPRDLNP---RFSLINAKHPLFLLENKKC-IANDLH 342 Q D +++ FA V +++P L R +L ++H ++++ I ND+H Sbjct 600 AQLDAVVS---FAHVSDAAPVPYVRPVILEKGRGRITLKASRHACVEVQDEVAFIPNDVH 656 Query 343 LAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVE 402 Q +++GPN GGK+ ++ G++ LMA+ G FV C+ AE+ + I Sbjct 657 FEKDKQ-----MFHIITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCEWAEVSIVDCILAR 711 Query 403 LGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFS 462 +G ++ + +STF + + I A + SLI++DE GT G +A + EY + Sbjct 712 VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA 771 Query 463 VK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPT--YKLLNGIPGQSYAIELA 519 K A + THF L LA+ N + + T Y++ G+ QS+ I +A Sbjct 772 TKIGAFCMFATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVA 831 Query 520 ERMGLNNNIIQKAR 533 E ++I+ A+ Sbjct 832 ELANFPRHVIECAK 845 >RecName: Full=DNA mismatch repair protein Msh3; AltName: Full=Protein repair-1; Short=REP-1; AltName: Full=Protein repair-3; Short=REP-3 [Mus musculus] Sequence ID: P13705.3 Length: 1091 Range 1: 816 to 1064 Score:99.0 bits(245), Expect:9e-20, Method:Compositional matrix adjust., Identities:76/261(29%), Positives:129/261(49%), Gaps:34/261(13%) Query 323 NAKHPL---FLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALM 379 N +HP+ L E + + N L+ S V +++GPN GGK+ +K V ++ +M Sbjct 816 NGRHPMIDVLLGEQDQFVPNSTSLS------DSERVMIITGPNMGGKSSYIKQVTLVTIM 869 Query 380 AKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLD 439 A+ G +V ++A I + IF +G N + STF L I +A+ SL++LD Sbjct 870 AQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEQLTDTAEIIRRASPQSLVILD 929 Query 440 EGFVGTDPAIGVAMARSTLEYF--SVKKATVIITTHFSNLKTLA---------------- 481 E GT G+A+A +TLEYF VK T+ + TH+ + L Sbjct 930 ELGRGTSTHDGIAIAYATLEYFIRDVKSLTLFV-THYPPVCELEKCYPEQVGNYHMGFLV 988 Query 482 -DNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSES 540 +++S+ +G ME P + Y++ GI +SY + +A+ + ++QKA +S Sbjct 989 NEDESKQDSGDMEQMPDSVTFLYQITRGIAARSYGLNVAKLADVPREVLQKA----AHKS 1044 Query 541 ERMENLLKELQLKRIEINEEL 561 + +E L+ L+ KR+E +L Sbjct 1045 KELEGLV-SLRRKRLECFTDL 1064 >RecName: Full=DNA mismatch repair protein MutS [Escherichia coli 536] Sequence ID: Q0TEC9.1 Length: 853 Range 1: 533 to 790 Score:98.6 bits(244), Expect:1e-19, Method:Compositional matrix adjust., Identities:73/268(27%), Positives:127/268(47%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H E + S+ L + D ++ + A ++ P F+ P + +HP+ Sbjct 533 DLLLPHLEALQQSASALAELDVLVNLAERAYTLNYTCPTFID----KPGIRITEGRHPVV 588 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IALMA G +V Sbjct 589 EQVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALMAYIGSYVPA 642 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 K EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 643 QKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTY 702 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 703 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 762 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 763 QDGAASKSYGLAVAALAGVPKEVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Escherichia coli APEC O1] Sequence ID: A1AES5.1 Length: 853 >RecName: Full=DNA mismatch repair protein MutS [Escherichia coli S88] Sequence ID: B7MKK5.1 Length: 853 >RecName: Full=DNA mismatch repair protein MutS [Escherichia coli UTI89] Sequence ID: Q1R7W4.1 Length: 853 Range 1: 533 to 790 Score:98.6 bits(244), Expect:1e-19, Method:Compositional matrix adjust., Identities:73/268(27%), Positives:127/268(47%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H E + S+ L + D ++ + A ++ P F+ P + +HP+ Sbjct 533 DLLLPHLEALQQSASALAELDVLVNLAERAYTLNYTCPTFID----KPGIRITEGRHPVV 588 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IALMA G +V Sbjct 589 EQVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALMAYIGSYVPA 642 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 K EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 643 QKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTY 702 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 703 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 762 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 763 QDGAASKSYGLAVAALAGVPKEVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Escherichia coli O127:H6 str. E2348/69] Sequence ID: B7UHE9.1 Length: 853 Range 1: 533 to 790 Score:98.6 bits(244), Expect:1e-19, Method:Compositional matrix adjust., Identities:73/268(27%), Positives:127/268(47%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H E + S+ L + D ++ + A ++ P F+ P + +HP+ Sbjct 533 DLLLPHLEALQQSASALAELDVLVNLAERAYTLNYTCPTFID----KPGIRITEGRHPVV 588 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IALMA G +V Sbjct 589 EQVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALMAYIGSYVPA 642 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 K EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 643 QKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTY 702 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 703 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 762 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 763 QDGAASKSYGLAVAALAGVPKEVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Escherichia coli O139:H28 str. E24377A] Sequence ID: A7ZQH3.2 Length: 855 Range 1: 535 to 792 Score:98.6 bits(244), Expect:1e-19, Method:Compositional matrix adjust., Identities:73/268(27%), Positives:127/268(47%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H E + S+ L + D ++ + A ++ P F+ P + +HP+ Sbjct 535 DLLLPHLEALQQSASALAELDVLVNLAERAYTLNYTCPTFID----KPGIRITEGRHPVV 590 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IALMA G +V Sbjct 591 EQVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALMAYIGSYVPA 644 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 K EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 645 QKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTY 704 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 705 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 764 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 765 QDGAASKSYGLAVAALAGVPKEVIKRAR 792 >RecName: Full=DNA mismatch repair protein MutS [Shigella flexneri 5 str. 8401] Sequence ID: Q0T1G0.1 Length: 853 >RecName: Full=DNA mismatch repair protein MutS [Shigella flexneri] Sequence ID: Q83QE9.1 Length: 853 Range 1: 533 to 790 Score:98.6 bits(244), Expect:1e-19, Method:Compositional matrix adjust., Identities:73/268(27%), Positives:127/268(47%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H E + S+ L + D ++ + A ++ P F+ P + +HP+ Sbjct 533 DLLLPHLEALQQSASALAELDVLVNLAERAYTLNYTCPTFID----KPGIRITEGRHPVV 588 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IALMA G +V Sbjct 589 EQVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALMAYIGSYVPA 642 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 K EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 643 QKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTY 702 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 703 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 762 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 763 QDGAASKSYGLAVAALAGVPKEVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Escherichia coli 55989] Sequence ID: B7LEE7.1 Length: 853 >RecName: Full=DNA mismatch repair protein MutS [Shigella sonnei Ss046] Sequence ID: Q3YYC9.1 Length: 853 Range 1: 533 to 790 Score:98.6 bits(244), Expect:1e-19, Method:Compositional matrix adjust., Identities:73/268(27%), Positives:127/268(47%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H E + S+ L + D ++ + A ++ P F+ P + +HP+ Sbjct 533 DLLLPHLEALQQSASALAELDVLVNLAERAYTLNYTCPTFID----KPGIRITEGRHPVV 588 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IALMA G +V Sbjct 589 EQVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALMAYIGSYVPA 642 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 K EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 643 QKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTY 702 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 703 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 762 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 763 QDGAASKSYGLAVAALAGVPKEVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Escherichia coli O157:H7 str. EC4115] Sequence ID: B5Z397.1 Length: 853 >RecName: Full=DNA mismatch repair protein MutS [Escherichia coli IAI1] Sequence ID: B7LXE0.1 Length: 853 >RecName: Full=DNA mismatch repair protein MutS [Escherichia coli O157:H7] Sequence ID: Q9S6P8.1 Length: 853 Range 1: 533 to 790 Score:98.6 bits(244), Expect:1e-19, Method:Compositional matrix adjust., Identities:73/268(27%), Positives:127/268(47%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H E + S+ L + D ++ + A ++ P F+ P + +HP+ Sbjct 533 DLLLPHLEALQQSASALAELDVLVNLAERAYTLNYTCPTFID----KPGIRITEGRHPVV 588 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IALMA G +V Sbjct 589 EQVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALMAYIGSYVPA 642 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 K EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 643 QKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTY 702 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 703 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 762 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 763 QDGAASKSYGLAVAALAGVPKEVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Escherichia coli ED1a] Sequence ID: B7MYN6.1 Length: 853 Range 1: 533 to 790 Score:98.6 bits(244), Expect:1e-19, Method:Compositional matrix adjust., Identities:73/268(27%), Positives:127/268(47%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H E + S+ L + D ++ + A ++ P F+ P + +HP+ Sbjct 533 DLLLPHLEALQQSASALAELDVLVNLAERAYTLNYTCPTFID----KPGIRITEGRHPVV 588 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IALMA G +V Sbjct 589 EQVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALMAYIGSYVPA 642 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 K EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 643 QKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTY 702 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 703 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 762 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 763 QDGAASKSYGLAVAALAGVPKEVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Escherichia fergusonii ATCC 35469] Sequence ID: B7LWH8.1 Length: 853 >RecName: Full=DNA mismatch repair protein MutS [Escherichia coli UMN026] Sequence ID: B7N6W4.1 Length: 853 Range 1: 533 to 790 Score:98.6 bits(244), Expect:1e-19, Method:Compositional matrix adjust., Identities:73/268(27%), Positives:127/268(47%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H E + S+ L + D ++ + A ++ P F+ P + +HP+ Sbjct 533 DLLLPHLEALQQSASALAELDVLVNLAERAYTLNYTCPTFID----KPGIRITEGRHPVV 588 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IALMA G +V Sbjct 589 EQVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALMAYIGSYVPA 642 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 K EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 643 QKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTY 702 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 703 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 762 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 763 QDGAASKSYGLAVAALAGVPKEVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Escherichia coli CFT073] Sequence ID: Q8FEL3.1 Length: 853 Range 1: 533 to 790 Score:98.6 bits(244), Expect:1e-19, Method:Compositional matrix adjust., Identities:73/268(27%), Positives:127/268(47%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H E + S+ L + D ++ + A ++ P F+ P + +HP+ Sbjct 533 DLLLPHLEALQQSASALAELDVLVNLAERAYTLNYTCPTFID----KPGIRITEGRHPVV 588 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IALMA G +V Sbjct 589 EQVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALMAYIGSYVPA 642 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 K EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 643 QKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTY 702 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 703 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 762 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 763 QDGAASKSYGLAVAALAGVPKEVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Escherichia coli IAI39] Sequence ID: B7NT79.1 Length: 853 Range 1: 533 to 790 Score:98.6 bits(244), Expect:1e-19, Method:Compositional matrix adjust., Identities:73/268(27%), Positives:127/268(47%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H E + S+ L + D ++ + A ++ P F+ P + +HP+ Sbjct 533 DLLLPHLEALQQSASALAELDVLVNLAERAYTLNYTCPTFID----KPGIRITEGRHPVV 588 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IALMA G +V Sbjct 589 EQVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALMAYIGSYVPA 642 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 K EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 643 QKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTY 702 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 703 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 762 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 763 QDGAASKSYGLAVAALAGVPKEVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Escherichia coli SMS-3-5] Sequence ID: B1LQ55.1 Length: 853 Range 1: 533 to 790 Score:98.6 bits(244), Expect:1e-19, Method:Compositional matrix adjust., Identities:73/268(27%), Positives:127/268(47%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H E + S+ L + D ++ + A ++ P F+ P + +HP+ Sbjct 533 DLLLPHLEALQQSASALAELDVLVNLAERAYTLNYTCPTFID----KPGIRITEGRHPVV 588 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IALMA G +V Sbjct 589 EQVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALMAYIGSYVPA 642 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 K EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 643 QKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTY 702 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 703 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 762 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 763 QDGAASKSYGLAVAALAGVPKEVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Shigella boydii CDC 3083-94] Sequence ID: B2TZJ7.1 Length: 853 >RecName: Full=DNA mismatch repair protein MutS [Shigella boydii Sb227] Sequence ID: Q31X95.1 Length: 853 Range 1: 533 to 790 Score:98.2 bits(243), Expect:1e-19, Method:Compositional matrix adjust., Identities:73/268(27%), Positives:127/268(47%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H E + S+ L + D ++ + A ++ P F+ P + +HP+ Sbjct 533 DLLLPHLEALQQSASALAELDVLVNLAERAYTLNYTCPTFID----KPGIRITEGRHPVV 588 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IALMA G +V Sbjct 589 EQVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALMAYIGSYVPA 642 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 K EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 643 QKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTY 702 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 703 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEDVANVHLDALEHGDTIAFMHSV 762 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 763 QDGAASKSYGLAVAALAGVPKEVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Clostridioides difficile 630] Sequence ID: Q187T6.2 Length: 947 Range 1: 474 to 889 Score:98.6 bits(244), Expect:1e-19, Method:Compositional matrix adjust., Identities:101/433(23%), Positives:198/433(45%), Gaps:35/433(8%) Query 208 GHYVLPIRADRKSGI--EGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRIL 265 G+Y+ +A+ K E R + S + +I P+ +++ L A+ ++ E I Sbjct 474 GYYIEITKANFKQAKLDETYIRKQTLSNAERYITPELKEIEEKILH-AEEKIKSLEYEIF 532 Query 266 RELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAK 325 E+ Y + I ++ + D ++ A + + +KP + L+ R N + Sbjct 533 VEIRDTIYKNIDRIQKVAKTIANIDVFVSLATVAHINNYVKPAINENNKLDIR----NGR 588 Query 326 HPLF--LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAG 383 HP+ ++ + + ND +L ++GE + +++GPN GK+ M+ IIALMA G Sbjct 589 HPVVENIVGEENFVPNDTYL---NRGEN--IINIITGPNMSGKSTYMRQTAIIALMAHIG 643 Query 384 LFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFV 443 FV + A+I + IF +G + + STF + ++ I + A E SL++LDE Sbjct 644 SFVPAESADIPILDRIFTRVGASDDLSQGQSTFMVEMNEVSLILKNATERSLVILDEIGR 703 Query 444 GTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLL 500 GT G+++A S +EY + + TH+ L L + N S+ + ++ Sbjct 704 GTSTYDGISLAWSIVEYIQKNIRCKTLFATHYHELTDLEEEFKEVKNYSIAVKEDGEGII 763 Query 501 PTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIEINEE 560 K++ +SY I +A+ L + +I++A+ +++L K + IN + Sbjct 764 FLRKIIPQGADKSYGIYVAKLAKLPDEVIERAKYI-------LKDLEKNHVYNSVAINGD 816 Query 561 LTKQNLLTQKLDSEF-----KSLKNEKEQLSELRGDLVENYR------NKLQKRLNAFEN 609 N++ LD E + KN+ E L +V++Y+ +KL + A + Sbjct 817 KENNNIINSNLDEELVKVNQSNFKNKYESLKIEHELIVKDYKHIKKDYDKLNSKFKALND 876 Query 610 RLEIRERQFEKQK 622 + + ++ +K+K Sbjct 877 EVALMKQNDDKEK 889 >RecName: Full=DNA mismatch repair protein MutS [Cereibacter sphaeroides ATCC 17025] Sequence ID: A4WVX8.1 Length: 876 Range 1: 585 to 803 Score:98.2 bits(243), Expect:1e-19, Method:Compositional matrix adjust., Identities:63/223(28%), Positives:117/223(52%), Gaps:11/223(4%) Query 319 FSLINAKHPLFLLENKKC----IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVG 374 F++ +HP+ ++ +AND L S+ ET P VW+++GPN GK+ ++ Sbjct 585 FAIEAGRHPVVERALRRTGTPFVANDCDL---SKAET-PAVWLITGPNMAGKSTFLRQNA 640 Query 375 IIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELS 434 +IAL+A+AG FV +A I IF +G + STF + + I QA++ + Sbjct 641 LIALLAQAGSFVPARRAHIGLVSQIFSRVGASDDLARGRSTFMVEMVETAAILNQADDRA 700 Query 435 LILLDEGFVGTDPAIGVAMARSTLEYF-SVKKATVIITTHFSNLKTLADNDSRFFNGSME 493 L++LDE GT G+++A +TLE+ + + TH+ + LA + N ++ Sbjct 701 LVILDEIGRGTATWDGLSIAWATLEHLHDTNRCRALFATHYHEMTALAGKLTGVENATVS 760 Query 494 FEPHK--LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKART 534 + + ++ +++ G +SY +++A GL ++I++ART Sbjct 761 VKEWQGEVIFLHEVRRGAADRSYGVQVARLAGLPASVIERART 803 >RecName: Full=DNA mismatch repair protein MutS [Sinorhizobium meliloti 1021] Sequence ID: P56883.1 Length: 916 Range 1: 620 to 892 Score:98.6 bits(244), Expect:1e-19, Method:Compositional matrix adjust., Identities:72/274(26%), Positives:135/274(49%), Gaps:15/274(5%) Query 319 FSLINAKHPLF--LLENKKC---IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 F++ +HP+ L + +AN L+P + GE +W+L+GPN GGK+ ++ Sbjct 620 FAIDGGRHPVVEQALRRQAANPFVANGCDLSPPN-GEQGGAIWLLTGPNMGGKSTFLRQN 678 Query 374 GIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANEL 433 +IA+MA+ G FV A I + +F +G + STF + + I QA + Sbjct 679 ALIAIMAQTGSFVPAAAAHIGVVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQATDR 738 Query 434 SLILLDEGFVGTDPAIGVAMARSTLEYF-SVKKATVIITTHFSNLKTLADNDSRFFNGSM 492 SL++LDE GT G+++A + +E+ V + + THF L L++ R N +M Sbjct 739 SLVILDEIGRGTATFDGLSIAWAAVEHLHEVNRCRGLFATHFHELTVLSEKLVRLSNATM 798 Query 493 EFE--PHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGS--ESER---MEN 545 + ++ +++ G +SY I++A GL +++ +AR +++R Sbjct 799 RVKEWDGDVIFLHEVGPGAADRSYGIQVARLAGLPASVVARARDVLAKLEDADRKNPASQ 858 Query 546 LLKELQLKRIEI-NEELTKQNLLTQKLDSEFKSL 578 L+ +L L ++ + EE + + K++ K+L Sbjct 859 LIDDLPLFQVAVRREEAARASSGPSKVEEALKAL 892 >RecName: Full=DNA mismatch repair protein MutS [Sinorhizobium medicae WSM419] Sequence ID: A6U5G0.1 Length: 915 Range 1: 620 to 841 Score:98.6 bits(244), Expect:1e-19, Method:Compositional matrix adjust., Identities:63/223(28%), Positives:112/223(50%), Gaps:9/223(4%) Query 319 FSLINAKHPLF--LLENKKC---IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 F++ +HP+ L + +AN L+P GE +W+L+GPN GGK+ ++ Sbjct 620 FAIDGGRHPVVEQALRRQAANPFVANGCDLSPPG-GEEGGAIWLLTGPNMGGKSTFLRQN 678 Query 374 GIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANEL 433 +IA+MA+ G FV A I + +F +G + STF + + I QA + Sbjct 679 ALIAIMAQMGSFVPASAAHIGVVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQATDR 738 Query 434 SLILLDEGFVGTDPAIGVAMARSTLEYF-SVKKATVIITTHFSNLKTLADNDSRFFNGSM 492 SL++LDE GT G+++A + +E+ V + + THF L L++ R N +M Sbjct 739 SLVILDEIGRGTATFDGLSIAWAAVEHLHEVNRCRGLFATHFHELTVLSEKLGRLSNATM 798 Query 493 EFE--PHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 + ++ +++ G +SY I++A GL +++ +AR Sbjct 799 RVKEWDGDVIFLHEVGPGAADRSYGIQVARLAGLPASVVARAR 841 >RecName: Full=DNA mismatch repair protein MutS [Escherichia coli HS] Sequence ID: A8A3L2.1 Length: 853 >RecName: Full=DNA mismatch repair protein MutS [Escherichia coli ATCC 8739] Sequence ID: B1IUU6.1 Length: 853 >RecName: Full=DNA mismatch repair protein MutS [Escherichia coli str. K-12 substr. DH10B] Sequence ID: B1XCR0.1 Length: 853 >RecName: Full=DNA mismatch repair protein MutS [Escherichia coli BW2952] Sequence ID: C4ZZN7.1 Length: 853 >RecName: Full=DNA mismatch repair protein MutS [Escherichia coli K-12] Sequence ID: P23909.1 Length: 853 Range 1: 533 to 790 Score:98.2 bits(243), Expect:1e-19, Method:Compositional matrix adjust., Identities:73/268(27%), Positives:127/268(47%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H E + S+ L + D ++ + A ++ P F+ P + +HP+ Sbjct 533 DLLLPHLEALQQSASALAELDVLVNLAERAYTLNYTCPTFID----KPGIRITEGRHPVV 588 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IALMA G +V Sbjct 589 EQVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALMAYIGSYVPA 642 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 K EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 643 QKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTY 702 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 703 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 762 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 763 QDGAASKSYGLAVAALAGVPKEVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Pseudomonas putida GB-1] Sequence ID: B0KSD2.2 Length: 861 Range 1: 569 to 796 Score:98.2 bits(243), Expect:1e-19, Method:Compositional matrix adjust., Identities:65/234(28%), Positives:114/234(48%), Gaps:16/234(6%) Query 314 DLN-PRF------SLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGG 365 DLN PRF ++ +HP+ + +ANDL L + S + +++GPN GG Sbjct 569 DLNCPRFVDEPCLRIVQGRHPVVEQVLTTPFVANDLGL------DNSTRMLIITGPNMGG 622 Query 366 KTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKR 425 K+ M+ +I L+A G FV E+ + IF +G + STF +++ Sbjct 623 KSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETAN 682 Query 426 ISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDS 485 I A + SL+L+DE GT G+++A + E + +A + TH+ L L +++ Sbjct 683 ILHNATDRSLVLMDEVGRGTSTFDGLSLAWAAAERLAQLRAYTLFATHYFELTVLPESEP 742 Query 486 RFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYG 537 N + H +++ + +L G QSY + +A+ G+ +IQ+AR + G Sbjct 743 LVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPTVVIQRAREHLG 796 >RecName: Full=DNA mismatch repair protein MutS [Rhizobium etli CFN 42] Sequence ID: Q2KD76.1 Length: 908 Range 1: 606 to 838 Score:98.2 bits(243), Expect:2e-19, Method:Compositional matrix adjust., Identities:63/234(27%), Positives:121/234(51%), Gaps:10/234(4%) Query 309 FLKPR-DLNPRFSLINAKHPLFLLENKK-----CIANDLHLAPKSQGETSPYVWVLSGPN 362 + +P+ D + F++ +HP+ ++ +AN+ L+PK+ G+ +W+L+GPN Sbjct 606 YCRPQVDGSKMFAIEGGRHPVVEQALRRQAGGPFVANNCDLSPKT-GDKDGAIWLLTGPN 664 Query 363 AGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQ 422 GGK+ ++ +IA+MA+ G FV A I + +F +G + STF + + Sbjct 665 MGGKSTFLRQNALIAIMAQMGSFVPATSAHIGIVDRLFSRVGASDDLARGRSTFMVEMVE 724 Query 423 IKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYF-SVKKATVIITTHFSNLKTLA 481 I QA++ SL++LDE GT G+++A + +E+ + + THF L L+ Sbjct 725 TAAILNQASDRSLVILDEIGRGTATFDGLSIAWAAVEHLHEANRCRGLFATHFHELTVLS 784 Query 482 DNDSRFFNGSMEFE--PHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 + R N +M + ++ +++ G +SY I++A GL +++ +AR Sbjct 785 EKLGRLSNATMRVKEWDGDVIFLHEVGPGAADRSYGIQVARLAGLPASVVARAR 838 >RecName: Full=DNA mismatch repair protein MutS [Bartonella tribocorum CIP 105476] Sequence ID: A9ILT1.1 Length: 914 Range 1: 434 to 885 Score:97.8 bits(242), Expect:2e-19, Method:Compositional matrix adjust., Identities:110/471(23%), Positives:205/471(43%), Gaps:61/471(12%) Query 143 MELHAKLNKSVDMD--------GNILSSASPELHSARSRLEHAKRKIVEQLDEILKKQDI 194 + LH L +++ D G I S+ EL R+ + ++R I E + ++ DI Sbjct 434 VSLHCHLEQALADDLPLLKRDGGFIRSNYHKELDEMRALRDESRRVIAELQAQYAQETDI 493 Query 195 RNALQDDVWMLRDGH-----YVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQ--- 246 + L+ H Y + I + + SG+ P+ ++ FI Q +A Sbjct 494 KT--------LKIKHNNILGYFIEITSTQASGLTNNPQAKAR-----FIHRQTMANAMRF 540 Query 247 --------QAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKF 298 ++++ A N E I L ++ E I ++E L D +A Sbjct 541 TTTELADLESRIAHAANHALTLELEIFDTLVQEIIEQVEFIRKAAEALAILDVSVALAYL 600 Query 299 AGVIHGIKPEFLKPR-DLNPRFSLINAKHPLFLLENKK-----CIANDLHLAPKSQGETS 352 A + + +P+ D + F + +HP+ +K +AND L+ + + + Sbjct 601 AE-----EQGYCRPKIDHSLTFHITAGRHPVVEQALRKQAAEPFVANDCDLSVQ-ENQQY 654 Query 353 PYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREED 412 +W+L+GPN GGK+ ++ +IA+MA+ G FV A I + +F +G + Sbjct 655 AAIWLLTGPNMGGKSTFLRQNALIAIMAQMGSFVPATSAHIGVVDRLFSRVGASDDLARG 714 Query 413 LSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYF-SVKKATVIIT 471 STF + + I A+ SL++LDE GT G+++A + +EY V I+ Sbjct 715 RSTFMMEMVETATILNHASHHSLVILDEIGRGTSTFDGLSIAWAAVEYLHEVNHCRAILA 774 Query 472 THFSNLKTLADNDSRFFNGSMEFE--PHKLLPTYKLLNGIPGQSYAIELAERMGLNNNII 529 THF + L + R N +M+ + ++ +++ G +SY +++A+ GL +I Sbjct 775 THFHEMTALTEKLDRLHNVTMKVKNWDGDVVFLHEVTPGAADRSYGVQVAKLAGLPPAVI 834 Query 530 QKARTYY-----GSESERMENLLKELQLKRIE----INEELTKQNLLTQKL 571 +A G + + L+ +L L ++ +NEE K + L + L Sbjct 835 TRATDVLHQLEQGEMAGKGHKLIDDLPLFSLKATSSLNEEKNKHDALHEAL 885 >RecName: Full=DNA mismatch repair protein MutS [Roseiflexus sp. RS-1] Sequence ID: A5UZK7.1 Length: 1085 Range 1: 702 to 989 Score:98.2 bits(243), Expect:2e-19, Method:Compositional matrix adjust., Identities:74/297(25%), Positives:144/297(48%), Gaps:22/297(7%) Query 249 QLEKAQNDVEVEEQRIL----RELSKDCYLV---HEDILSSSEILTQFDNIIARTKFAGV 301 +L++ + VE +QR++ R ++ C +V +L ++ ++ D A + A Sbjct 702 ELKRYEEIVEQAQQRLIDLERRAFARICDVVTGAGARLLRTARMIATIDVFAALAEAAVR 761 Query 302 IHGIKPEFLKPRDLNPRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSG 360 ++PE + R ++ +HP+ ++ + ND+ + +++ + +++G Sbjct 762 GRYVRPELYD----DTRLRIVGGRHPVVEQTLDETFVPNDIEMDTETR-----QICLITG 812 Query 361 PNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHL 420 PN GK+ ++ V +IALMA+ G FV D AEI + IF +G + + STF + Sbjct 813 PNMSGKSTVLRQVALIALMAQIGSFVPADAAEIGLVDRIFTRIGAQDDIATGRSTFMVEM 872 Query 421 AQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKK---ATVIITTHFSNL 477 + + Q+ SLI+LDE GT G+A+A++ +EY + + TH+ L Sbjct 873 TETAALLAQSTRRSLIILDEVGRGTSTYDGMAIAQAVIEYIHNEPRLGCRTLFATHYHEL 932 Query 478 KTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKA 532 L R N M + +++ ++L G +SY I +AE G+ ++I++A Sbjct 933 TDLERTLPRLKNYHMAATEQDGRVVFLHELRPGGADRSYGIHVAELAGIPQSVIRRA 989 >RecName: Full=DNA mismatch repair protein MutS [Pseudomonas entomophila L48] Sequence ID: Q1I659.1 Length: 857 Range 1: 575 to 792 Score:97.8 bits(242), Expect:2e-19, Method:Compositional matrix adjust., Identities:61/224(27%), Positives:109/224(48%), Gaps:9/224(4%) Query 317 PRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGI 375 P + +HP+ + +ANDL L + S + +++GPN GGK+ M+ + Sbjct 575 PCLRIEQGRHPVVEQVLTTPFVANDLGL------DNSTRMLIITGPNMGGKSTYMRQTAL 628 Query 376 IALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSL 435 I LMA G FV + E+ + IF +G + STF +++ I A + SL Sbjct 629 IVLMAHIGSFVPAARCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNATDCSL 688 Query 436 ILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFE 495 +L+DE GT G+++A + E + +A + TH+ L L +++ N + Sbjct 689 VLMDEVGRGTSTFDGLSLAWAAAERLAQLRAYTLFATHYFELTVLPESEPLVANVHLNAT 748 Query 496 PH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYG 537 H +++ + +L G QSY + +A+ G+ +IQ+AR + G Sbjct 749 EHNERIVFLHHVLPGPASQSYGLAVAQLAGVPAVVIQRAREHLG 792 >RecName: Full=DNA mismatch repair protein MutS [Pseudomonas [fluorescens] SBW25] Sequence ID: C3KCT2.1 Length: 863 Range 1: 569 to 794 Score:97.8 bits(242), Expect:2e-19, Method:Compositional matrix adjust., Identities:65/232(28%), Positives:114/232(49%), Gaps:16/232(6%) Query 314 DLN-PRF------SLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGG 365 DLN PRF ++ +HP+ + +ANDL L ++ + V++GPN GG Sbjct 569 DLNCPRFVSEPCMRIVQGRHPVVEQVLTTPFVANDLSLDDDTR------MLVITGPNMGG 622 Query 366 KTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKR 425 K+ M+ +I L+A G FV E+ + IF +G + STF +++ Sbjct 623 KSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETAN 682 Query 426 ISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDS 485 I A E SL+L+DE GT G+++A + E + +A + TH+ L L +++ Sbjct 683 ILHNATERSLVLMDEVGRGTSTFDGLSLAWAAAERLAHLRAYTLFATHYFELTVLPESEP 742 Query 486 RFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY 535 N + H +++ + +L G QSY + +A+ G+ N++I +AR + Sbjct 743 LVTNVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPNDVITRAREH 794 >RecName: Full=DNA mismatch repair protein MutS [Pseudomonas putida W619] Sequence ID: B1JB25.1 Length: 857 Range 1: 565 to 792 Score:97.4 bits(241), Expect:2e-19, Method:Compositional matrix adjust., Identities:66/234(28%), Positives:114/234(48%), Gaps:16/234(6%) Query 314 DLN-PRF------SLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGG 365 DLN PRF + +HP+ + +ANDL L + S + +++GPN GG Sbjct 565 DLNCPRFVDEPCLRIDQGRHPVVEQVLTTPFVANDLGL------DNSTRMLIITGPNMGG 618 Query 366 KTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKR 425 K+ M+ +I LMA G FV E+ + IF +G + STF +++ Sbjct 619 KSTYMRQTALIVLMAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETAN 678 Query 426 ISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDS 485 I A + SL+L+DE GT G+++A + E + +A + TH+ L L +++ Sbjct 679 ILHNATDRSLVLMDEVGRGTSTFDGLSLAWAAAERLAQLRAYTLFATHYFELTVLPESEP 738 Query 486 RFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYG 537 N + H +++ + +L G QSY + +A+ G+ + +IQ+AR + G Sbjct 739 LVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPSPVIQRAREHLG 792 >RecName: Full=DNA mismatch repair protein Msh3; Short=hMSH3; AltName: Full=Divergent upstream protein; Short=DUP; AltName: Full=Mismatch repair protein 1; Short=MRP1 [Homo sapiens] Sequence ID: P20585.4 Length: 1137 Range 1: 822 to 1097 Score:97.8 bits(242), Expect:2e-19, Method:Compositional matrix adjust., Identities:82/298(28%), Positives:137/298(45%), Gaps:44/298(14%) Query 272 CYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPL--- 328 C VH L D I + K A +P + R + + N +HP+ Sbjct 822 CKAVHH--------LATVDCIFSLAKVAKQGDYCRPTVQEER----KIVIKNGRHPVIDV 869 Query 329 FLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 L E + + N+ L+ E S V +++GPN GGK+ +K V +I +MA+ G +V Sbjct 870 LLGEQDQYVPNNTDLS-----EDSERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPA 924 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 ++A I + IF +G N + STF L I +A SL++LDE GT Sbjct 925 EEATIGIVDGIFTRMGAADNIYKGQSTFMEELTDTAEIIRKATSQSLVILDELGRGTSTH 984 Query 449 IGVAMARSTLEYF--SVKKATVIITTHFSNLKTL-----------------ADNDSRFFN 489 G+A+A +TLEYF VK T+ + TH+ + L ++++S+ Sbjct 985 DGIAIAYATLEYFIRDVKSLTLFV-THYPPVCELEKNYSHQVGNYHMGFLVSEDESKLDP 1043 Query 490 GSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLL 547 G+ E P + Y++ GI +SY + +A+ + I++KA +S+ +E L+ Sbjct 1044 GAAEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILKKA----AHKSKELEGLI 1097 >RecName: Full=DNA mismatch repair protein MutS [Acholeplasma laidlawii PG-8A] Sequence ID: A9NGL6.1 Length: 841 Range 1: 531 to 772 Score:97.4 bits(241), Expect:2e-19, Method:Compositional matrix adjust., Identities:68/255(27%), Positives:129/255(50%), Gaps:17/255(6%) Query 283 SEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLH 342 S+I+ D I+ +K A + ++P+ R ++ N +HP+ + ++ + I N +H Sbjct 531 SQIIASVDKYISLSKVAEMYKYVRPKLNHNRIVDIE----NGRHPV-VEQHVEFIKNHIH 585 Query 343 LAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVE 402 + P +++L+GPN GK+ M+ +I +MA+ G+FV A + Y+ IF Sbjct 586 MKPSE-------IFILTGPNMSGKSTYMRMFAVITVMAQTGMFVPATSANLPIYDAIFTR 638 Query 403 LGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFS 462 +G + STF + + A E SLIL DE GT G+A+A++ +EY Sbjct 639 IGSSDDISGGKSTFMVEMVEANDALTYATENSLILFDEIGRGTATYDGLALAQAMIEYVH 698 Query 463 VK-KATVIITTHFSNLKTLADNDSRFFN---GSMEFEPHKLLPTYKLLNGIPGQSYAIEL 518 + KA ++ +TH+ L L++ N ++E + H + +++ G +SY I++ Sbjct 699 TQIKAQMMFSTHYHELTKLSEKHDLITNLHVKAIEQKDHMVF-LHQVELGSSDKSYGIQV 757 Query 519 AERMGLNNNIIQKAR 533 A L + +I++A+ Sbjct 758 AALAHLPDPVIKRAK 772 >RecName: Full=DNA mismatch repair protein MutS [Rhodopseudomonas palustris CGA009] Sequence ID: P61670.1 Length: 907 Range 1: 523 to 833 Score:96.7 bits(239), Expect:4e-19, Method:Compositional matrix adjust., Identities:78/316(25%), Positives:149/316(47%), Gaps:23/316(7%) Query 237 FIEPQALAMQ-----------QAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEI 285 FI Q LA Q +A++ A + E I L+ +D+ +++ Sbjct 523 FIHRQTLAGQVRFTTAELGEIEAKIANAGDRALGLELEIFDRLAGSIDAAGDDLRAAAHA 582 Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKC----IANDL 341 D A K A + ++PE D + F++ +HP+ K+ IAN Sbjct 583 FALLDVATALAKLASDDNYVRPEV----DESLAFAIEGGRHPVVEQALKRAGEPFIANAC 638 Query 342 HLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFV 401 L+P + + +W+L+GPN GK+ ++ +IAL+A+ G FV +A I + +F Sbjct 639 DLSP-GPAQKNGQIWLLTGPNMAGKSTFLRQNALIALLAQVGSFVPAIRARIGIVDRLFS 697 Query 402 ELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYF 461 +G + STF + + I QA+E +L++LDE GT G+++A + +E+ Sbjct 698 RVGAADDLARGRSTFMVEMVETAAILNQASERALVILDEIGRGTATFDGLSIAWAAIEHL 757 Query 462 SVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIEL 518 + + + TH+ L L+ R FN ++ + + ++ +++L G +SY I++ Sbjct 758 HEQNRCRSLFATHYHELTALSAKLPRLFNATVRVKEWRGEVVFLHEVLPGSADRSYGIQV 817 Query 519 AERMGLNNNIIQKART 534 A+ GL +++ +A+ Sbjct 818 AKLAGLPPSVVSRAKA 833 >RecName: Full=DNA mismatch repair protein MutS [Agrobacterium fabrum str. C58] Sequence ID: Q8UIF2.1 Length: 904 Range 1: 605 to 867 Score:96.7 bits(239), Expect:4e-19, Method:Compositional matrix adjust., Identities:72/265(27%), Positives:134/265(50%), Gaps:16/265(6%) Query 314 DLNPRFSLINAKHPLF--LLENKKC---IANDLHLAPKSQGETSPYVWVLSGPNAGGKTV 368 D + FS+ +HP+ L + IAN+ L+ + G+ +W+L+GPN GGK+ Sbjct 605 DASMTFSIKGGRHPVVEQALRRQSAGPFIANNCDLSAVNGGKNGA-IWLLTGPNMGGKST 663 Query 369 AMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISE 428 ++ +IA++A+ G FV + A I + +F +G + STF + + I Sbjct 664 FLRQNALIAILAQIGSFVPAEAAHIGVVDRLFSRVGASDDLARGRSTFMVEMVETAAILN 723 Query 429 QANELSLILLDEGFVGTDPAIGVAMARSTLEYF-SVKKATVIITTHFSNLKTLADNDSRF 487 QA + SL++LDE GT G+++A + +E+ V + + THF L L++ R Sbjct 724 QATDRSLVILDEIGRGTATFDGLSIAWAAVEHLHEVNRCRGLFATHFHELTVLSEKLGRL 783 Query 488 FNGSM---EFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGS--ESER 542 N +M E+E + +++ G +SY I++A GL +++++AR +++R Sbjct 784 SNATMRVKEWEGDVIF-LHEVGPGAADRSYGIQVARLAGLPASVVERAREVLTKLEDADR 842 Query 543 ---MENLLKELQLKRIEINEELTKQ 564 L+ +L L +I + E T++ Sbjct 843 KNPASQLIDDLPLFQIAVRREETRK 867 >RecName: Full=DNA mismatch repair protein MutS [Cereibacter sphaeroides 2.4.1] Sequence ID: Q3IYI5.1 Length: 875 Range 1: 556 to 803 Score:96.7 bits(239), Expect:5e-19, Method:Compositional matrix adjust., Identities:73/257(28%), Positives:127/257(49%), Gaps:17/257(6%) Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKC----IANDL 341 L + D I A A +PE D + F++ +HP+ ++ +AN Sbjct 556 LAELDLISAFADLAVTEDWTEPEI----DDSRAFAIEAGRHPVVERALRRTGTPFVANHC 611 Query 342 HLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFV 401 L S GET P VW+++GPN GK+ ++ +IAL+A+AG FV +A I IF Sbjct 612 DL---STGET-PAVWLITGPNMAGKSTFLRQNALIALLAQAGSFVPARRAHIGLVSQIFS 667 Query 402 ELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYF 461 +G + STF + + I QA++ +L++LDE GT G+++A +TLE+ Sbjct 668 RVGASDDLARGRSTFMVEMVETAAILNQADDRALVILDEIGRGTATWDGLSIAWATLEHL 727 Query 462 SVK-KATVIITTHFSNLKTLADNDSRFFNGSM---EFEPHKLLPTYKLLNGIPGQSYAIE 517 + + + TH+ + LA N ++ E+E + +++ G +SY ++ Sbjct 728 HDRNRCRALFATHYHEMTALAGKLKGVENATVAVKEWEGDVIF-LHEVRRGAADRSYGVQ 786 Query 518 LAERMGLNNNIIQKART 534 +A GL ++I++ART Sbjct 787 VARLAGLPASVIERART 803 >RecName: Full=DNA mismatch repair protein MutS [Shigella dysenteriae Sd197] Sequence ID: Q32CJ6.1 Length: 853 Range 1: 533 to 790 Score:96.3 bits(238), Expect:5e-19, Method:Compositional matrix adjust., Identities:72/268(27%), Positives:128/268(47%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H E + S+ L + D ++ + A ++ P F+ + + + +HP+ Sbjct 533 DLLLPHLEALQQSASALAELDVLVNLAERAYTLNYTCPTFIDKQGIR----ITEGRHPVV 588 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IALMA G +V Sbjct 589 ERVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALMAYIGSYVPA 642 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 K EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 643 QKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTY 702 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 703 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGIANVHLDALEHGDTIAFMHSV 762 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 763 QDGAASKSYGLAVAALAGVPKEVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Azotobacter vinelandii] Sequence ID: P27345.1 Length: 855 Range 1: 565 to 790 Score:96.3 bits(238), Expect:5e-19, Method:Compositional matrix adjust., Identities:62/232(27%), Positives:115/232(49%), Gaps:10/232(4%) Query 308 EFLKPRDLN-PRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGG 365 +F +PR + P + +HP+ + + +ANDL L ++ + +++GPN GG Sbjct 565 DFNRPRFVEEPCLRIRQGRHPVVEQVLDTPFVANDLELDDNTR------MLIITGPNMGG 618 Query 366 KTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKR 425 K+ M+ +I L+A G FV E+ + IF +G + STF +++ Sbjct 619 KSTYMRQTALIVLLAHIGSFVPAQSCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETAN 678 Query 426 ISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDS 485 I A+E SL+L+DE GT G+++A + E+ + +A + TH+ L LA++ Sbjct 679 ILHNASERSLVLMDEVGRGTSTFDGLSLAWAAAEHLAGLRAWTLFATHYFELTVLAESQP 738 Query 486 RFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY 535 N + H +++ + +L G QSY + +A+ G+ +I +AR + Sbjct 739 VVANVHLSATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPGPVISRAREH 790 >RecName: Full=DNA mismatch repair protein MutS [Azotobacter vinelandii DJ] Sequence ID: C1DSR1.1 Length: 855 Range 1: 565 to 790 Score:96.3 bits(238), Expect:5e-19, Method:Compositional matrix adjust., Identities:62/232(27%), Positives:115/232(49%), Gaps:10/232(4%) Query 308 EFLKPRDLN-PRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGG 365 +F +PR + P + +HP+ + + +ANDL L ++ + +++GPN GG Sbjct 565 DFNRPRFVEEPCLRIRQGRHPVVEQVLDTPFVANDLELDDNTR------MLIITGPNMGG 618 Query 366 KTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKR 425 K+ M+ +I L+A G FV E+ + IF +G + STF +++ Sbjct 619 KSTYMRQTALIVLLAHIGSFVPAQSCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETAN 678 Query 426 ISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDS 485 I A+E SL+L+DE GT G+++A + E+ + +A + TH+ L LA++ Sbjct 679 ILHNASERSLVLMDEVGRGTSTFDGLSLAWAAAEHLAGLRAWTLFATHYFELTVLAESQP 738 Query 486 RFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY 535 N + H +++ + +L G QSY + +A+ G+ +I +AR + Sbjct 739 VVANVHLSATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPGPVISRAREH 790 >RecName: Full=DNA mismatch repair protein MutS [Chromohalobacter israelensis DSM 3043] Sequence ID: Q1QZX5.1 Length: 859 Range 1: 567 to 790 Score:96.3 bits(238), Expect:5e-19, Method:Compositional matrix adjust., Identities:61/230(27%), Positives:114/230(49%), Gaps:10/230(4%) Query 308 EFLKPR-DLNPRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGG 365 +F++PR P + +HP+ + + + NDL L + + + V++GPN GG Sbjct 567 DFVRPRLSDQPGLRIRGGRHPVVEHVSDHPFVPNDLML------DETRRLLVITGPNMGG 620 Query 366 KTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKR 425 K+ M+ +IAL+A G V D+AEI + IF +G + STF + + Sbjct 621 KSTYMRQAALIALLAHTGSCVPADEAEIGPVDRIFTRIGSSDDLAGGRSTFMVEMTETAT 680 Query 426 ISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDS 485 I A E SL+L+DE GT G+++A ++ E+ ++A + TH+ + L + Sbjct 681 ILHNATEHSLVLMDEIGRGTSTFDGLSLAWASAEHLVERRAFTLFATHYFEMTALTEPYD 740 Query 486 RFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 N + H+ ++ +++ G QSY +++A+ G+ ++ +AR Sbjct 741 SVANVHLTAAEHRDGIVFMHRVEEGPASQSYGLQVAQLAGVPPRVVARAR 790 >RecName: Full=DNA mismatch repair protein MutS [Nitrosospira multiformis ATCC 25196] Sequence ID: Q2YB94.1 Length: 902 Range 1: 613 to 825 Score:96.3 bits(238), Expect:6e-19, Method:Compositional matrix adjust., Identities:63/215(29%), Positives:106/215(49%), Gaps:5/215(2%) Query 324 AKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAG 383 +HP+ + IAND+ L ++ G + V++GPN GGK+ M+ V +IAL+A G Sbjct 613 GRHPVVEKQVDSFIANDVQLGARTGGRRQ--MLVITGPNMGGKSTYMRQVALIALLAHCG 670 Query 384 LFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFV 443 FV A I + +F +G + STF + + I A SL+L+DE Sbjct 671 SFVPARSALIGPLDQLFTRIGASDDLAGGRSTFMMEMTEAANILHNATAQSLVLMDEVGR 730 Query 444 GTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPHK--LL 500 GT G+A+A + Y K ++ + TH+ L LA+ ++ N + HK ++ Sbjct 731 GTSTFDGLALAFAIARYLLEKNRSYTLFATHYFELTRLAEEFAQVANVHLRAVEHKHHIV 790 Query 501 PTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY 535 + + G QSY +++A G+ + +I+ AR Y Sbjct 791 FLHAVNEGPASQSYGLQVAALAGVPDPVIRTARRY 825 >RecName: Full=DNA mismatch repair protein MutS [Cereibacter sphaeroides ATCC 17029] Sequence ID: A3PNR5.1 Length: 880 Range 1: 561 to 808 Score:96.3 bits(238), Expect:6e-19, Method:Compositional matrix adjust., Identities:72/257(28%), Positives:127/257(49%), Gaps:17/257(6%) Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKC----IANDL 341 L + D I A A + +PE D + F++ +HP+ ++ +AN Sbjct 561 LAELDLISAFADLAAIEDWTEPEI----DDSRAFAIEAGRHPVVERALRRTGTPFVANHC 616 Query 342 HLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFV 401 L S G T P VW+++GPN GK+ ++ +IAL+A+AG FV +A I IF Sbjct 617 DL---STGGT-PAVWLITGPNMAGKSTFLRQNALIALLAQAGSFVPARRAHIGLVSQIFS 672 Query 402 ELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYF 461 +G + STF + + I QA++ +L++LDE GT G+++A +TLE+ Sbjct 673 RVGASDDLARGRSTFMVEMVETAAILNQADDRALVILDEIGRGTATWDGLSIAWATLEHL 732 Query 462 SVK-KATVIITTHFSNLKTLADNDSRFFNGSM---EFEPHKLLPTYKLLNGIPGQSYAIE 517 + + + TH+ + LA N ++ E+E + +++ G +SY ++ Sbjct 733 HDRNRCRALFATHYHEMTALAGKLKGVENATVAVKEWEGDVIF-LHEVRRGAADRSYGVQ 791 Query 518 LAERMGLNNNIIQKART 534 +A GL ++I++ART Sbjct 792 VARLAGLPASVIERART 808 >RecName: Full=DNA mismatch repair protein MutS [Pseudomonas putida KT2440] Sequence ID: Q88ME7.1 Length: 857 Range 1: 565 to 792 Score:95.9 bits(237), Expect:7e-19, Method:Compositional matrix adjust., Identities:65/234(28%), Positives:113/234(48%), Gaps:16/234(6%) Query 314 DLN-PRF------SLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGG 365 DLN PRF + +HP+ + +ANDL L + S + +++GPN GG Sbjct 565 DLNCPRFVDEPCLRIEQGRHPVVEQVLTTPFVANDLGL------DNSTRMLIITGPNMGG 618 Query 366 KTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKR 425 K+ M+ +I L+A G FV E+ + IF +G + STF +++ Sbjct 619 KSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETAN 678 Query 426 ISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDS 485 I A + SL+L+DE GT G+++A + E + +A + TH+ L L +++ Sbjct 679 ILHNATDRSLVLMDEVGRGTSTFDGLSLAWAAAERLAQLRAYTLFATHYFELTVLPESEP 738 Query 486 RFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYG 537 N + H +++ + +L G QSY + +A+ G+ +IQ+AR + G Sbjct 739 LVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPTAVIQRAREHLG 792 >RecName: Full=DNA mismatch repair protein MutS [Stutzerimonas stutzeri A1501] Sequence ID: A4VJN9.2 Length: 859 Range 1: 572 to 794 Score:95.9 bits(237), Expect:7e-19, Method:Compositional matrix adjust., Identities:63/234(27%), Positives:116/234(49%), Gaps:15/234(6%) Query 306 KPEFLKPRDLNPRFSLINAKHPLF--LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNA 363 +P F++ P + +HP+ +LE +ANDL L + + + V++GPN Sbjct 572 RPRFVE----QPCLRIEQGRHPVVEQVLETP-FVANDLAL------DDATRMLVITGPNM 620 Query 364 GGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQI 423 GGK+ M+ +I L+A+ G FV E+ + IF +G + STF +++ Sbjct 621 GGKSTYMRQTALIVLLAQIGSFVPAAACELSLVDRIFTRIGSSDDLAGGRSTFMVEMSET 680 Query 424 KRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADN 483 I A++ SL+L+DE GT G+++A + E + +A + TH+ L L ++ Sbjct 681 ANILHNASDRSLVLMDEVGRGTSTFDGLSLAWAAAEQLARLRAFTLFATHYFELTVLPES 740 Query 484 DSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY 535 + N + H +++ + +L G QSY + +A+ G+ +IQ+AR + Sbjct 741 EPVVANVHLSATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPGEVIQRARDH 794 >RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS protein homolog 3 [Scheffersomyces stipitis CBS 6054] Sequence ID: A3LU10.3 Length: 1025 Range 1: 787 to 975 Score:95.9 bits(237), Expect:8e-19, Method:Compositional matrix adjust., Identities:57/189(30%), Positives:101/189(53%), Gaps:11/189(5%) Query 355 VWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLS 414 V +++GPN GGK+ +K V ++ +M++ G ++ CD+A + +++IF+ +G N + S Sbjct 787 VLIITGPNMGGKSSYVKQVALLVIMSQIGCYIPCDRATLGVFDSIFIRMGASDNILKGNS 846 Query 415 TFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYF--SVKKATVIITT 472 TF + + I + SL++LDE GT + G+A+A S L Y S + V+ T Sbjct 847 TFMNEMLECSNIIHGISNKSLVILDEIGRGTGTSDGIALAYSILRYLIESPLRPLVLFIT 906 Query 473 HFSNLKTLADN-DSRFFNGSMEFEP-HK-------LLPTYKLLNGIPGQSYAIELAERMG 523 H+ +L L D+ + N M F+ HK ++ Y L+ G+ SY + +A+ G Sbjct 907 HYPSLHVLEDSFPTVVTNYHMGFQQIHKDDNDFPEIIFLYNLVKGVINNSYGLNVAKLAG 966 Query 524 LNNNIIQKA 532 L ++I A Sbjct 967 LPVSVISGA 975 >RecName: Full=DNA mismatch repair protein MutS [Bradyrhizobium diazoefficiens USDA 110] Sequence ID: Q89VX1.1 Length: 912 Range 1: 528 to 838 Score:95.5 bits(236), Expect:9e-19, Method:Compositional matrix adjust., Identities:79/316(25%), Positives:149/316(47%), Gaps:23/316(7%) Query 237 FIEPQALAMQ-----------QAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEI 285 FI Q LA Q +A++ A + E I L + +D+ ++++ Sbjct 528 FIHRQTLAGQIRFTTSELGEIEAKIANAGDRALGLELEIFERLCAKALEISDDLRAAAQG 587 Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKK----CIANDL 341 D + K A + ++PE D + F++ +HP+ K+ IAN Sbjct 588 FALLDVATSLAKLAVDENYVRPEV----DSSLGFAIEAGRHPVVEQALKRNGEPFIANAC 643 Query 342 HLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFV 401 L+P + + S +W+L+GPN GK+ ++ +IAL+A+ G FV +A I + +F Sbjct 644 DLSP-APAQKSGQLWLLTGPNMAGKSTFLRQNALIALLAQIGSFVPATRARIGIIDRLFS 702 Query 402 ELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYF 461 +G + STF + + I QA E +L++LDE GT G+++A + +E+ Sbjct 703 RVGAADDLARGRSTFMVEMVETAAILNQAGERALVILDEIGRGTATFDGLSIAWAAIEHL 762 Query 462 -SVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIEL 518 + + TH+ L L+ R FN ++ + + ++ +++L G +SY I++ Sbjct 763 HESNRCRTLFATHYHELTALSAKLPRMFNATVRVKEWQGNVVFLHEVLPGSADRSYGIQV 822 Query 519 AERMGLNNNIIQKART 534 A+ GL +I +A++ Sbjct 823 AKLAGLPPAVITRAKS 838 >RecName: Full=DNA mismatch repair protein MutS [Roseiflexus castenholzii DSM 13941] Sequence ID: A7NPT5.1 Length: 1088 Range 1: 706 to 993 Score:95.5 bits(236), Expect:1e-18, Method:Compositional matrix adjust., Identities:75/297(25%), Positives:141/297(47%), Gaps:22/297(7%) Query 249 QLEKAQNDVEVEEQRIL----RELSKDCYLVHED---ILSSSEILTQFDNIIARTKFAGV 301 +L++ + VE +QR++ R ++ C + +L ++ + D A + A Sbjct 706 ELKRYEEIVEQAQQRLIDLERRAFARICETLAGAGVRLLRTARTIATIDVFAALAEAAVR 765 Query 302 IHGIKPEFLKPRDLNPRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSG 360 ++PE + R +I +HP+ ++ I ND+ + +++ + +++G Sbjct 766 GRYVRPELYD----DTRLRIIGGRHPVVEQTLDETFIPNDIEMDTETR-----QICLITG 816 Query 361 PNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHL 420 PN GK+ ++ V +IALMA+ G FV D AEI + IF +G + + STF + Sbjct 817 PNMSGKSTVLRQVALIALMAQIGSFVPADAAEIGVVDRIFTRIGAQDDIATGRSTFMVEM 876 Query 421 AQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKK---ATVIITTHFSNL 477 + + Q+ SLI+LDE GT G+A+A++ +EY + + TH+ L Sbjct 877 TETAALLAQSTHRSLIILDEVGRGTSTYDGMAIAQAVIEYIHNEPRLGCRTLFATHYHEL 936 Query 478 KTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKA 532 L R N M + +++ ++L G +SY I +AE G+ +I++A Sbjct 937 TDLERTLPRLKNYHMAATEQDGRVVFLHELRPGGADRSYGIHVAELAGIPQPVIRRA 993 >RecName: Full=DNA mismatch repair protein MutS [Pseudomonas putida F1] Sequence ID: A5W816.1 Length: 857 Range 1: 575 to 792 Score:95.5 bits(236), Expect:1e-18, Method:Compositional matrix adjust., Identities:60/224(27%), Positives:108/224(48%), Gaps:9/224(4%) Query 317 PRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGI 375 P + +HP+ + +ANDL L + S + +++GPN GGK+ M+ + Sbjct 575 PCLRIEQGRHPVVEQVLTTPFVANDLGL------DNSTRMLIITGPNMGGKSTYMRQTAL 628 Query 376 IALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSL 435 I L+A G FV E+ + IF +G + STF +++ I A + SL Sbjct 629 IVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNATDRSL 688 Query 436 ILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFE 495 +L+DE GT G+++A + E + +A + TH+ L L +++ N + Sbjct 689 VLMDEVGRGTSTFDGLSLAWAAAERLAQLRAYTLFATHYFELTVLPESEPLVANVHLNAT 748 Query 496 PH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYG 537 H +++ + +L G QSY + +A+ G+ +IQ+AR + G Sbjct 749 EHNERIVFLHHVLPGPASQSYGLAVAQLAGVPTAVIQRAREHLG 792 >RecName: Full=DNA mismatch repair protein MutS [Enterobacter sp. 638] Sequence ID: A4WDU5.1 Length: 853 Range 1: 541 to 790 Score:95.5 bits(236), Expect:1e-18, Method:Compositional matrix adjust., Identities:69/260(27%), Positives:124/260(47%), Gaps:14/260(5%) Query 278 DILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF-LLENKKC 336 D+ +S+ L + D +I + A ++ P F+ P + +HP+ + + Sbjct 541 DLQASASALAELDVLINLAERADTLNYACPTFID----KPGIRITEGRHPVVEQVLREPF 596 Query 337 IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDY 396 IAN L+L+P+ + + +++GPN GGK+ M+ +IAL+A G +V K EI Sbjct 597 IANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALLAYIGSYVPAQKVEIGPI 650 Query 397 ENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARS 456 + IF +G + STF + + I A E SL+L+DE GT G+++A + Sbjct 651 DRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWA 710 Query 457 TLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQS 513 E + K KA + TH+ L L + N ++ H + + + +G +S Sbjct 711 CAESLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHTVQDGAASKS 770 Query 514 YAIELAERMGLNNNIIQKAR 533 Y + +A G+ +I++AR Sbjct 771 YGLAVAALAGVPKEVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Bartonella henselae str. Houston-1] Sequence ID: Q6G542.1 Length: 914 Range 1: 606 to 837 Score:95.5 bits(236), Expect:1e-18, Method:Compositional matrix adjust., Identities:62/233(27%), Positives:117/233(50%), Gaps:10/233(4%) Query 309 FLKPR-DLNPRFSLINAKHPLFLLENKK-----CIANDLHLAPKSQGETSPYVWVLSGPN 362 + +P+ D + F + +HP+ +K +AN+ L+ + + + +W+L+GPN Sbjct 606 YCRPKIDQSLTFCITAGRHPVVEQALRKQAAEPFVANNCDLSLQENHQYAA-IWLLTGPN 664 Query 363 AGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQ 422 GGK+ ++ +IA+MA+ G FV A I + +F +G + STF + + Sbjct 665 MGGKSTFLRQNALIAIMAQMGSFVPATSAHIGVVDRLFSRVGASDDLARGRSTFMMEMVE 724 Query 423 IKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYF-SVKKATVIITTHFSNLKTLA 481 I A + SL++LDE GT G+++A +T+EY V I+ THF + L Sbjct 725 TATILNHATQHSLVILDEIGRGTSTFDGLSIAWATVEYLHEVNHCRAILATHFHEMTALT 784 Query 482 DNDSRFFNGSMEFE--PHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKA 532 + R N +M+ + ++ +++ G +SY +++A+ GL +I +A Sbjct 785 EKLDRLHNVTMKVKNWDGDVIFLHEVTPGAADRSYGVQVAKLAGLPKAVITRA 837 >RecName: Full=DNA mismatch repair protein MutS [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-] Sequence ID: A9MF43.1 Length: 860 Range 1: 540 to 797 Score:95.1 bits(235), Expect:1e-18, Method:Compositional matrix adjust., Identities:72/268(27%), Positives:126/268(47%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H D+ S+ L + D ++ + A ++ P F P +I +HP+ Sbjct 540 DLLLPHLADLQQSASALAELDVLVNLAERAYTLNYTCPTFTD----KPGIRIIEGRHPVV 595 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IAL+A G +V Sbjct 596 EQVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALLAWIGSYVPA 649 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 650 QNVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTY 709 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 710 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 769 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 770 QDGAASKSYGLAVAALAGVPKEVIKRAR 797 >RecName: Full=DNA mismatch repair protein MSH1, mitochondrial; Short=AtMSH1; AltName: Full=MutS protein homolog 1; AltName: Full=Protein CHLOROPLAST MUTATOR; Flags: Precursor [Arabidopsis thaliana] Sequence ID: Q84LK0.1 Length: 1118 Range 1: 763 to 946 Score:95.1 bits(235), Expect:1e-18, Method:Compositional matrix adjust., Identities:56/185(30%), Positives:101/185(54%), Gaps:4/185(2%) Query 355 VWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLS 414 +++L+GPN GGK+ ++++ AL+ +GL V + A I +++I + + + + S Sbjct 763 LFLLTGPNGGGKSSLLRSICAAALLGISGLMVPAESACIPHFDSIMLHMKSYDSPVDGKS 822 Query 415 TFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHF 474 +F +++I+ I QA SL+L+DE GT+ A G +A S +E I++TH Sbjct 823 SFQVEMSEIRSIVSQATSRSLVLIDEICRGTETAKGTCIAGSVVESLDTSGCLGIVSTHL 882 Query 475 SNLKTL---ADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQK 531 + +L A N + G+ E + PT+KL +G+ +S A E A+R G+ ++IQ+ Sbjct 883 HGIFSLPLTAKNITYKAMGAENVE-GQTKPTWKLTDGVCRESLAFETAKREGVPESVIQR 941 Query 532 ARTYY 536 A Y Sbjct 942 AEALY 946 >RecName: Full=DNA mismatch repair protein MutS [Cronobacter sakazakii ATCC BAA-894] Sequence ID: A7MJ43.1 Length: 853 Range 1: 576 to 790 Score:94.7 bits(234), Expect:1e-18, Method:Compositional matrix adjust., Identities:63/221(29%), Positives:109/221(49%), Gaps:10/221(4%) Query 317 PRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGI 375 P L+ +HP+ + N+ IAN L L+P+ + + +++GPN GGK+ M+ + Sbjct 576 PGIRLVEGRHPVVERVLNEPFIANPLSLSPQRR------MLIITGPNMGGKSTYMRQTAL 629 Query 376 IALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSL 435 I LMA G FV ++AEI + IF +G + STF + + I A E SL Sbjct 630 IVLMAYIGSFVPAEQAEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSL 689 Query 436 ILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEF 494 +L+DE GT G+++A + E + + KA + TH+ L L + N ++ Sbjct 690 VLMDEIGRGTSTYDGLSLAWACAESLANRIKALTLFATHYFELTQLPEKMEGVANVHLDA 749 Query 495 EPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 H + + + +G +SY + +A G+ +I++AR Sbjct 750 IEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRAR 790 >RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=Mismatch-binding protein; Short=MBP; AltName: Full=MutS protein homolog 3 [Saccharomyces cerevisiae YJM789] Sequence ID: A6ZTR3.2 Length: 1018 >RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=Mismatch-binding protein; Short=MBP; AltName: Full=MutS protein homolog 3 [Saccharomyces cerevisiae S288C] Sequence ID: P25336.2 Length: 1018 Range 1: 725 to 1013 Score:95.1 bits(235), Expect:1e-18, Method:Compositional matrix adjust., Identities:79/303(26%), Positives:155/303(51%), Gaps:31/303(10%) Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLI--NAKHPLFLLENKKCIANDLHL 343 L Q+D I++ + ++ ++P F+ N + ++I NA++P+ + + ND+ + Sbjct 725 LAQYDCILSLAATSCNVNYVRPTFV-----NGQQAIIAKNARNPIIESLDVHYVPNDIMM 779 Query 344 APKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVEL 403 +P++ G+ + +++GPN GGK+ ++ V ++ +MA+ G FV ++ + +EN+ + Sbjct 780 SPEN-GKIN----IITGPNMGGKSSYIRQVALLTIMAQIGSFVPAEEIRLSIFENVLTRI 834 Query 404 GDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFS- 462 G + STF + I I + N+ SL+LLDE GT G+A++ + ++YFS Sbjct 835 GAHDDIINGDSTFKVEMLDILHILKNCNKRSLLLLDEVGRGTGTHDGIAISYALIKYFSE 894 Query 463 -VKKATVIITTHFSNLKTLADNDSRFFNGSMEF--------EPHKLLPTYKLLNGIPGQS 513 ++ TTHF L + R N M++ + ++ YKL G+ S Sbjct 895 LSDCPLILFTTHFPMLGEIKSPLIR--NYHMDYVEEQKTGEDWMSVIFLYKLKKGLTYNS 952 Query 514 YAIELAERMGLNNNIIQKARTYYGSESERMENLLKEL-----QLKRIEINEELTKQNLLT 568 Y + +A+ L+ +II +A + SE R E++ ++ LKRI ++ +T + L Sbjct 953 YGMNVAKLARLDKDIINRA--FSISEELRKESINEDALKLFSSLKRILKSDNITATDKLA 1010 Query 569 QKL 571 + L Sbjct 1011 KLL 1013 >RecName: Full=DNA mismatch repair protein MutS [Shewanella denitrificans OS217] Sequence ID: Q12PY3.1 Length: 862 Range 1: 554 to 794 Score:94.7 bits(234), Expect:2e-18, Method:Compositional matrix adjust., Identities:70/252(28%), Positives:121/252(48%), Gaps:16/252(6%) Query 287 TQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINA-KHPLF-LLENKKCIANDLHLA 344 + D I + A +H +P+ + + INA +HP+ + + IAN ++L Sbjct 554 AELDVICCFAERAESLHYTQPQMVSKTGIQ-----INAGRHPVVERVSSTAFIANPVNLD 608 Query 345 PKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELG 404 K ++ +++GPN GGK+ M+ V +I+LMA G FV D A I + IF +G Sbjct 609 AKR------HMLIVTGPNMGGKSTYMRQVALISLMAHIGCFVPADSAVIGPIDRIFTRIG 662 Query 405 DRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK 464 + STF + + I A SL+L+DE GT G+++A S EY +++ Sbjct 663 ASDDLASGRSTFMVEMTETANILHNATSQSLVLMDEIGRGTSTYDGLSLAWSAAEYLALQ 722 Query 465 -KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAER 521 KA + TH+ L L D N ++ H + + + G +SY +++A Sbjct 723 IKAMTLFATHYFELTQLPDLIPGANNVHLDAIEHDDTIAFMHAVQEGAASKSYGLQVAAL 782 Query 522 MGLNNNIIQKAR 533 G+ +++IQ A+ Sbjct 783 AGVPSHVIQAAK 794 >RecName: Full=DNA mismatch repair protein MutS [Aliivibrio fischeri MJ11] Sequence ID: B5FAC8.1 Length: 854 Range 1: 525 to 791 Score:94.7 bits(234), Expect:2e-18, Method:Compositional matrix adjust., Identities:73/278(26%), Positives:134/278(48%), Gaps:16/278(5%) Query 261 EQRILRELSKDCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRF 319 E+R+ EL D L H E + S + +++ D + + A ++ +P K +N Sbjct 525 EKRLWEELF-DQLLPHLEQLQSMANAISELDVLSNLAERADTLNYCRPVLTKETGIN--- 580 Query 320 SLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIAL 378 + +HP+ + + IAN + L P + + +++GPN GGK+ M+ +IAL Sbjct 581 -IEGGRHPVVEQVMSDPFIANPIKLNPDRK------MLIITGPNMGGKSTYMRQTALIAL 633 Query 379 MAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILL 438 MA G +V D AEI + IF +G + STF + + I A + SL+L+ Sbjct 634 MAHVGCYVPADSAEIGTLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATKHSLVLM 693 Query 439 DEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH 497 DE GT G+++A ++ E+ + K A + TH+ L L + + N ++ H Sbjct 694 DEIGRGTSTYDGLSLAWASAEWLATKINAMTLFATHYFELTELPNLFTGLANVHLDAVEH 753 Query 498 --KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 ++ + + G +SY + +A G+ ++I+KA+ Sbjct 754 GDEIAFMHAVQEGAANKSYGLAVASLAGVPKSVIKKAK 791 >RecName: Full=DNA mismatch repair protein MutS [Paracoccus denitrificans PD1222] Sequence ID: A1B095.1 Length: 878 Range 1: 531 to 802 Score:94.7 bits(234), Expect:2e-18, Method:Compositional matrix adjust., Identities:71/281(25%), Positives:137/281(48%), Gaps:17/281(6%) Query 261 EQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFS 320 E+ I LS+ + ++ L + D A A ++PE D + F Sbjct 531 EREIFARLSRAVLDRAGPVGQAARALAEIDLTAAFADLASGEGWVRPEV----DASRAFV 586 Query 321 LINAKHPLFLLENKK----CIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGII 376 + +HP+ K+ +AND L +QGET P +W+L+GPN GK+ ++ +I Sbjct 587 IEGGRHPVVERALKRKGEAFVANDCAL---TQGET-PAIWLLTGPNMAGKSTFLRQNALI 642 Query 377 ALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLI 436 A++A+AG FV +A I +F +G + STF + + I QA++ +L+ Sbjct 643 AILAQAGGFVPARRAHIGLVSQLFSRVGAADDLARGRSTFMVEMVETAAILNQADDHALV 702 Query 437 LLDEGFVGTDPAIGVAMARSTLEYF-SVKKATVIITTHFSNLKTLADNDSRFFNGSM--- 492 +LDE GT G+++A + +E+ + + + TH+ + +L+ N ++ Sbjct 703 ILDEIGRGTATWDGLSIAWAVMEHLHATNRCRALFATHYHEMTSLSARLPGVENATVAVR 762 Query 493 EFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 E+E +++ +++ G +SY +++A GL +++ +AR Sbjct 763 EWE-GEVIFLHEVRKGAADRSYGVQVARLAGLPPSVVDRAR 802 >RecName: Full=DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Sequence ID: A6TD24.1 Length: 853 Range 1: 533 to 790 Score:94.7 bits(234), Expect:2e-18, Method:Compositional matrix adjust., Identities:72/268(27%), Positives:125/268(46%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H D+ +S+ L + D ++ + A ++ P F P + +HP+ Sbjct 533 DLLLPHLADLQTSASALAELDVLVNLAERAETLNYCCPTFSD----KPGIRISEGRHPVV 588 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + + IAN L LAP+ + + +++GPN GGK+ M+ +IAL+A G +V Sbjct 589 EQVLKEPFIANPLQLAPQRR------MLIITGPNMGGKSTYMRQTALIALLAYIGSYVPA 642 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 K EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 643 QKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTY 702 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 703 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 762 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 763 QDGAASKSYGLAVAALAGVPKEVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Pseudomonas paraeruginosa PA7] Sequence ID: A6V1G8.1 Length: 855 Range 1: 565 to 790 Score:94.7 bits(234), Expect:2e-18, Method:Compositional matrix adjust., Identities:66/233(28%), Positives:115/233(49%), Gaps:18/233(7%) Query 314 DLN-PRF------SLINAKHPLF--LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAG 364 DLN PRF + +HP+ +LE +ANDL L ++ + V++GPN G Sbjct 565 DLNRPRFVEHTCLHIEQGRHPVVEQVLETP-FVANDLALDADTR------MLVITGPNMG 617 Query 365 GKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIK 424 GK+ M+ +I L+A G FV + E+ + IF +G + STF +++ Sbjct 618 GKSTYMRQTALIVLLAHIGSFVPAARCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETA 677 Query 425 RISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADND 484 I A + SL+L+DE GT G+++A + E + +A + TH+ L L ++ Sbjct 678 NILHNATDKSLVLMDEVGRGTSTFDGLSLAWAAAEDLARTRAFTLFATHYFELTVLPESQ 737 Query 485 SRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY 535 N + H +++ + +L G QSY + +A+ G+ + +IQ+AR + Sbjct 738 PAVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPSPVIQRAREH 790 >RecName: Full=DNA mismatch repair protein MutS [Aliivibrio fischeri ES114] Sequence ID: Q5E7G7.2 Length: 854 Range 1: 525 to 791 Score:94.7 bits(234), Expect:2e-18, Method:Compositional matrix adjust., Identities:73/278(26%), Positives:134/278(48%), Gaps:16/278(5%) Query 261 EQRILRELSKDCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRF 319 E+R+ EL D L H E + S + +++ D + + A ++ +P K +N Sbjct 525 EKRLWEELF-DQLLPHLEQLQSMANAISELDVLSNLAERADTLNYCRPVLTKETGIN--- 580 Query 320 SLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIAL 378 + +HP+ + + IAN + L P + + +++GPN GGK+ M+ +IAL Sbjct 581 -IEGGRHPVVEQVMSDPFIANPIKLNPDRK------MLIITGPNMGGKSTYMRQTALIAL 633 Query 379 MAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILL 438 MA G +V D AEI + IF +G + STF + + I A + SL+L+ Sbjct 634 MAHVGCYVPADSAEIGTLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATKHSLVLM 693 Query 439 DEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH 497 DE GT G+++A ++ E+ + K A + TH+ L L + + N ++ H Sbjct 694 DEIGRGTSTYDGLSLAWASAEWLATKINAMTLFATHYFELTELPNLFTGLANVHLDAVEH 753 Query 498 --KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 ++ + + G +SY + +A G+ ++I+KA+ Sbjct 754 GDEIAFMHAVQEGAANKSYGLAVASLAGVPKSVIKKAK 791 >RecName: Full=DNA mismatch repair protein Msh2; AltName: Full=MutS protein homolog 2 [Mus musculus] Sequence ID: P43247.1 Length: 935 Range 1: 540 to 845 Score:94.7 bits(234), Expect:2e-18, Method:Compositional matrix adjust., Identities:82/314(26%), Positives:146/314(46%), Gaps:22/314(7%) Query 234 STVFIEPQALAMQQAQL-----EKAQNDVEVEEQR--ILRELSKDCYLVHEDILSSSEIL 286 STV I+ + ++L E +N E EE + I++E+ E + + +++L Sbjct 540 STVDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVL 599 Query 287 TQFDNIIARTKFAGVIHGIKPEFLKPRDLNP---RFSLINAKHPLFLLENKKC-IANDLH 342 D I++ FA V + +++P L R L ++H ++++ I ND+H Sbjct 600 AHLDAIVS---FAHVSNAAPVPYVRPVILEKGKGRIILKASRHACVEVQDEVAFIPNDVH 656 Query 343 LAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVE 402 Q +++GPN GGK+ ++ G+I LMA+ G FV C+ AE+ + I Sbjct 657 FEKDKQ-----MFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILAR 711 Query 403 LGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFS 462 +G ++ + +STF + + I A + SLI++DE GT G +A + +Y + Sbjct 712 VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIA 771 Query 463 VK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPT--YKLLNGIPGQSYAIELA 519 K A + THF L LA+ N + + T Y++ G+ QS+ I +A Sbjct 772 TKIGAFCMFATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVA 831 Query 520 ERMGLNNNIIQKAR 533 E ++I A+ Sbjct 832 ELANFPRHVIACAK 845 >RecName: Full=DNA mismatch repair protein MutS [Klebsiella variicola 342] Sequence ID: B5XV49.1 Length: 853 Range 1: 533 to 790 Score:94.7 bits(234), Expect:2e-18, Method:Compositional matrix adjust., Identities:72/268(27%), Positives:125/268(46%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H D+ +S+ L + D ++ + A ++ P F P + +HP+ Sbjct 533 DLLLPHLADLQTSASALAELDVLVNLAERAETLNYCCPTFSD----KPGIRISEGRHPVV 588 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + + IAN L LAP+ + + +++GPN GGK+ M+ +IAL+A G +V Sbjct 589 EQVLKEPFIANPLQLAPQRR------MLIITGPNMGGKSTYMRQTALIALLAYIGSYVPA 642 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 K EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 643 QKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTY 702 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 703 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 762 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 763 QDGAASKSYGLAVAALAGVPKEVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Pseudomonas aeruginosa UCBPP-PA14] Sequence ID: Q02R92.1 Length: 855 Range 1: 565 to 790 Score:94.4 bits(233), Expect:2e-18, Method:Compositional matrix adjust., Identities:66/233(28%), Positives:114/233(48%), Gaps:18/233(7%) Query 314 DLN-PRF------SLINAKHPLF--LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAG 364 DLN PRF + +HP+ +LE +ANDL L ++ + V++GPN G Sbjct 565 DLNRPRFVEHTCLHIEQGRHPVVEQVLETP-FVANDLALDADTR------MLVITGPNMG 617 Query 365 GKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIK 424 GK+ M+ +I L+A G FV + E+ + IF +G + STF +++ Sbjct 618 GKSTYMRQTALIVLLAHIGSFVPAARCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETA 677 Query 425 RISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADND 484 I A + SL+L+DE GT G+++A + E + +A + TH+ L L ++ Sbjct 678 NILHNATDKSLVLMDEVGRGTSTFDGLSLAWAAAEDLARTRAFTLFATHYFELTVLPESQ 737 Query 485 SRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY 535 N + H +++ + +L G QSY + +A+ G+ +IQ+AR + Sbjct 738 PAVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPTPVIQRAREH 790 >RecName: Full=DNA mismatch repair protein MutS [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] Sequence ID: B4TTU0.1 Length: 855 Range 1: 535 to 792 Score:94.4 bits(233), Expect:2e-18, Method:Compositional matrix adjust., Identities:71/268(26%), Positives:126/268(47%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H D+ S+ L + D ++ ++ A ++ P F P + +HP+ Sbjct 535 DLLLPHLADLQQSANALAELDVLVNLSERAWTLNYTCPTFTD----KPGIRITEGRHPVV 590 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IAL+A G +V Sbjct 591 EQVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALLAYIGSYVPA 644 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 645 QNVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTY 704 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 705 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 764 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 765 QDGAASKSYGLAVAALAGVPKEVIKRAR 792 >RecName: Full=DNA mismatch repair protein MutS [Rhizobium johnstonii 3841] Sequence ID: Q1MMA5.1 Length: 908 Range 1: 606 to 838 Score:94.4 bits(233), Expect:2e-18, Method:Compositional matrix adjust., Identities:61/234(26%), Positives:121/234(51%), Gaps:10/234(4%) Query 309 FLKPR-DLNPRFSLINAKHPLFLLENKK-----CIANDLHLAPKSQGETSPYVWVLSGPN 362 + +P+ D + F++ + +HP+ ++ +AN L+PK+ G+ +W+L+GPN Sbjct 606 YCRPQVDGSKMFAIESGRHPVVEQALRRQAGGPFVANHCDLSPKT-GDRDGAIWLLTGPN 664 Query 363 AGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQ 422 GGK+ ++ +I+++A+ G FV A I + +F +G + STF + + Sbjct 665 MGGKSTFLRQNALISILAQMGSFVPATSAHIGIVDRLFSRVGASDDLARGRSTFMVEMVE 724 Query 423 IKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYF-SVKKATVIITTHFSNLKTLA 481 I QA++ SL++LDE GT G+++A + +E+ + + THF L L+ Sbjct 725 TAAILNQASDRSLVILDEIGRGTATFDGLSIAWAAVEHLHEANRCRGLFATHFHELTVLS 784 Query 482 DNDSRFFNGSMEFE--PHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 + R N +M + ++ +++ G +SY I++A GL +++ +AR Sbjct 785 EKLGRLSNATMRVKEWDGDVIFLHEVGPGAADRSYGIQVARLAGLPASVVARAR 838 >RecName: Full=DNA mismatch repair protein MutS [Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594] Sequence ID: C0PWV2.1 Length: 855 Range 1: 535 to 792 Score:94.0 bits(232), Expect:2e-18, Method:Compositional matrix adjust., Identities:71/268(26%), Positives:125/268(46%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H D+ S+ L + D ++ + A ++ P F P + +HP+ Sbjct 535 DLLLPHLADLQQSANALAELDVLVNLAERAWTLNYTCPTFTD----KPGIRITEGRHPVV 590 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IAL+A G +V Sbjct 591 EQVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALLAYIGSYVPA 644 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 645 QNVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTY 704 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 705 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 764 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 765 QDGAASKSYGLAVAALAGVPKEVIKRAR 792 >RecName: Full=DNA mismatch repair protein MutS [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Sequence ID: A9N1F8.2 Length: 855 >RecName: Full=DNA mismatch repair protein MutS [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] Sequence ID: B4TFU6.1 Length: 855 >RecName: Full=DNA mismatch repair protein MutS [Salmonella enterica subsp. enterica serovar Agona str. SL483] Sequence ID: B5F3Y8.1 Length: 855 >RecName: Full=DNA mismatch repair protein MutS [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] Sequence ID: B5RDN2.1 Length: 855 >RecName: Full=DNA mismatch repair protein MutS [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] Sequence ID: P0A1Y0.1 Length: 855 >RecName: Full=DNA mismatch repair protein MutS [Salmonella enterica subsp. enterica serovar Typhi] Sequence ID: P0A1Y1.1 Length: 855 >RecName: Full=DNA mismatch repair protein MutS [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] Sequence ID: Q57KL5.1 Length: 855 Range 1: 535 to 792 Score:94.0 bits(232), Expect:3e-18, Method:Compositional matrix adjust., Identities:71/268(26%), Positives:125/268(46%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H D+ S+ L + D ++ + A ++ P F P + +HP+ Sbjct 535 DLLLPHLADLQQSANALAELDVLVNLAERAWTLNYTCPTFTD----KPGIRITEGRHPVV 590 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IAL+A G +V Sbjct 591 EQVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALLAYIGSYVPA 644 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 645 QNVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTY 704 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 705 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 764 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 765 QDGAASKSYGLAVAALAGVPKEVIKRAR 792 >RecName: Full=DNA mismatch repair protein MutS [Salmonella enterica subsp. enterica serovar Newport str. SL254] Sequence ID: B4T436.1 Length: 855 Range 1: 535 to 792 Score:94.0 bits(232), Expect:3e-18, Method:Compositional matrix adjust., Identities:71/268(26%), Positives:125/268(46%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H D+ S+ L + D ++ + A ++ P F P + +HP+ Sbjct 535 DLLLPHLADLQQSANALAELDVLVNLAERAWTLNYTCPTFTD----KPGIRITEGRHPVV 590 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IAL+A G +V Sbjct 591 EQVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALLAYIGSYVPA 644 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 645 QNVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTY 704 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 705 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 764 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 765 QDGAASKSYGLAVAALAGVPKEVIKRAR 792 >RecName: Full=DNA mismatch repair protein MutS [Marinobacter nauticus VT8] Sequence ID: A1U2E8.1 Length: 874 Range 1: 544 to 790 Score:94.0 bits(232), Expect:3e-18, Method:Compositional matrix adjust., Identities:67/257(26%), Positives:125/257(48%), Gaps:14/257(5%) Query 282 SSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF-LLENKKCIAND 340 +++ L + D + + A + PEF P F + +HP+ L ++ + N+ Sbjct 544 AAQALAELDVLSNFAERATSLRFTAPEFTD----QPGFDVEEGRHPVVEQLLDEPFVPNN 599 Query 341 LHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIF 400 L + +T + V++GPN GGK+ M+ +IAL+A G FV ++A + + IF Sbjct 600 LLM------DTKRRMLVITGPNMGGKSTYMRQAALIALLAYTGSFVPANRAVLGPVDRIF 653 Query 401 VELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEY 460 +G + STF + + I A E SL+L+DE GT G+++A +T E+ Sbjct 654 TRMGSSDDIAGGRSTFMVEMTETANILHNATEHSLVLMDEVGRGTSTFDGLSLAWATAEH 713 Query 461 FSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIE 517 + + + TH+ L LAD+ N + H ++ + + +G QSY ++ Sbjct 714 LAKNIRCYTLFATHYFELTQLADDLEHAVNVHLTATEHDDSIVFLHNVHDGPASQSYGLQ 773 Query 518 LAERMGLNNNIIQKART 534 +A+ G+ ++I+ A+T Sbjct 774 VAKLAGVPQDVIRNAKT 790 >RecName: Full=DNA mismatch repair protein MutS [Pseudomonas aeruginosa PAO1] Sequence ID: Q9HY08.1 Length: 855 Range 1: 565 to 790 Score:94.0 bits(232), Expect:3e-18, Method:Compositional matrix adjust., Identities:66/233(28%), Positives:114/233(48%), Gaps:18/233(7%) Query 314 DLN-PRF------SLINAKHPLF--LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAG 364 DLN PRF + +HP+ +LE +ANDL L ++ + V++GPN G Sbjct 565 DLNRPRFVEHTCLHIEQGRHPVVEQVLETP-FVANDLALDADTR------MLVITGPNMG 617 Query 365 GKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIK 424 GK+ M+ +I L+A G FV + E+ + IF +G + STF +++ Sbjct 618 GKSTYMRQTALIVLLAHIGSFVPAARCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETA 677 Query 425 RISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADND 484 I A + SL+L+DE GT G+++A + E + +A + TH+ L L ++ Sbjct 678 NILHNATDKSLVLMDEVGRGTSTFDGLSLAWAAAEDLARTRAFTLFATHYFELTVLPESQ 737 Query 485 SRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY 535 N + H +++ + +L G QSY + +A+ G+ +IQ+AR + Sbjct 738 PAVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPAPVIQRAREH 790 >RecName: Full=DNA mismatch repair protein MutS [Pseudomonas aeruginosa LESB58] Sequence ID: B7V8C8.1 Length: 855 Range 1: 565 to 790 Score:94.0 bits(232), Expect:3e-18, Method:Compositional matrix adjust., Identities:66/233(28%), Positives:114/233(48%), Gaps:18/233(7%) Query 314 DLN-PRF------SLINAKHPLF--LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAG 364 DLN PRF + +HP+ +LE +ANDL L ++ + V++GPN G Sbjct 565 DLNRPRFVEHTCLHIEQGRHPVVEQVLETP-FVANDLALDADTR------MLVITGPNMG 617 Query 365 GKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIK 424 GK+ M+ +I L+A G FV + E+ + IF +G + STF +++ Sbjct 618 GKSTYMRQTALIVLLAHIGSFVPAARCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETA 677 Query 425 RISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADND 484 I A + SL+L+DE GT G+++A + E + +A + TH+ L L ++ Sbjct 678 NILHNATDKSLVLMDEVGRGTSTFDGLSLAWAAAEDLARTRAFTLFATHYFELTVLPESQ 737 Query 485 SRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY 535 N + H +++ + +L G QSY + +A+ G+ +IQ+AR + Sbjct 738 PAVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPAPVIQRAREH 790 >RecName: Full=DNA mismatch repair protein MutS [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Sequence ID: Q5PEE6.1 Length: 855 Range 1: 535 to 792 Score:94.0 bits(232), Expect:3e-18, Method:Compositional matrix adjust., Identities:71/268(26%), Positives:125/268(46%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H D+ S+ L + D ++ + A ++ P F P + +HP+ Sbjct 535 DLLLPHLADLQQSANALAELDVLVNLAERAWTLNYTCPTFTD----KPGIRITEGRHPVV 590 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IAL+A G +V Sbjct 591 EQVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALLAYIGSYVPA 644 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 645 QNVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTY 704 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 705 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 764 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 765 QDGAASKSYGLAVAALAGVPKEVIKRAR 792 >RecName: Full=DNA mismatch repair protein MutS [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Sequence ID: B5FTQ5.1 Length: 855 Range 1: 535 to 792 Score:94.0 bits(232), Expect:3e-18, Method:Compositional matrix adjust., Identities:71/268(26%), Positives:125/268(46%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H D+ S+ L + D ++ + A ++ P F P + +HP+ Sbjct 535 DLLLPHLADLQQSANALAELDVLVNLAERAWTLNYTCPTFTD----KPGIRITEGRHPVV 590 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IAL+A G +V Sbjct 591 EQVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALLAYIGSYVPA 644 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 645 QNVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTY 704 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 705 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 764 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 765 QDGAASKSYGLAVAALAGVPKEVIKRAR 792 >RecName: Full=DNA mismatch repair protein MutS [Pectobacterium atrosepticum SCRI1043] Sequence ID: Q6D8C1.1 Length: 854 Range 1: 578 to 792 Score:93.6 bits(231), Expect:3e-18, Method:Compositional matrix adjust., Identities:61/221(28%), Positives:107/221(48%), Gaps:10/221(4%) Query 317 PRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGI 375 P + +HP+ + + I+N L L+P+ + + +++GPN GGK+ M+ + Sbjct 578 PGIKIAGGRHPVVEQVLREPFISNPLSLSPQRR------MLIITGPNMGGKSTYMRQAAL 631 Query 376 IALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSL 435 I LMA G FV D+A I + IF +G + STF + + I A E SL Sbjct 632 IVLMAHIGCFVPADQAVIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSL 691 Query 436 ILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEF 494 +L+DE GT G+++A + E + + KA + TH+ L TL + N ++ Sbjct 692 VLMDEIGRGTSTYDGLSLAWACAESLANRIKAMTLFATHYFELTTLPEKMEGVVNVHLDA 751 Query 495 EPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 H + + + +G +SY + +A G+ +I++AR Sbjct 752 REHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRAR 792 >RecName: Full=DNA mismatch repair protein MutS [Pectobacterium carotovorum subsp. carotovorum PC1] Sequence ID: C6DAK6.1 Length: 854 Range 1: 578 to 792 Score:93.6 bits(231), Expect:4e-18, Method:Compositional matrix adjust., Identities:61/221(28%), Positives:107/221(48%), Gaps:10/221(4%) Query 317 PRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGI 375 P + +HP+ + + I+N L L+P+ + + +++GPN GGK+ M+ + Sbjct 578 PGIKITGGRHPVVEQVLREPFISNPLSLSPQRR------MLIITGPNMGGKSTYMRQAAL 631 Query 376 IALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSL 435 I LMA G FV D+A I + IF +G + STF + + I A E SL Sbjct 632 IVLMAHIGCFVPADQAVIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSL 691 Query 436 ILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEF 494 +L+DE GT G+++A + E + + KA + TH+ L TL + N ++ Sbjct 692 VLMDEIGRGTSTYDGLSLAWACAENLANRIKAMTLFATHYFELTTLPEKMEGVVNVHLDA 751 Query 495 EPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 H + + + +G +SY + +A G+ +I++AR Sbjct 752 REHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRAR 792 >RecName: Full=DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae serovar 5b str. L20] Sequence ID: A3N2Q0.1 Length: 864 Range 1: 548 to 789 Score:93.6 bits(231), Expect:4e-18, Method:Compositional matrix adjust., Identities:68/253(27%), Positives:126/253(49%), Gaps:16/253(6%) Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF--LLENKKCIANDLHL 343 L++ D + + A ++ ++P F R +N + +HP+ +L++ IAN + L Sbjct 548 LSELDVLTNLAERAESLNYVRPTFSLQRGVNIK----GGRHPVVEQVLKDP-FIANPVFL 602 Query 344 APKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVEL 403 + ++ V++GPN GGK+ M+ + +I+LMA G FV D AEI + IF + Sbjct 603 NAQR------HLLVVTGPNMGGKSTYMRQIALISLMAYIGSFVPADSAEIGALDRIFTRI 656 Query 404 GDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSV 463 G + STF + ++ I QA E SL+L+DE GT G+++A + E+ + Sbjct 657 GASDDLASGRSTFMVEMTEMANILHQATEKSLVLIDEIGRGTSTYDGLSLAWACAEWLAK 716 Query 464 K-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIELAE 520 K ++ + TH+ L +L N ++ H+ ++ + + G +SY + +A Sbjct 717 KTQSLTLFATHYFELTSLPSQLKGVANVHLDAREHQDSIVFMHSVQEGAASKSYGLAVAA 776 Query 521 RMGLNNNIIQKAR 533 G+ +IQ A+ Sbjct 777 LAGVPKQVIQLAK 789 >RecName: Full=DNA mismatch repair protein MutS [Neisseria meningitidis Z2491] Sequence ID: Q9JWT7.1 Length: 864 Range 1: 547 to 796 Score:93.2 bits(230), Expect:5e-18, Method:Compositional matrix adjust., Identities:71/266(27%), Positives:125/266(46%), Gaps:20/266(7%) Query 284 EILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHL 343 ++L+ F + F ++PEF P + N +HP+ + + AN +L Sbjct 547 DVLSTFSALAKERNF------VRPEFAD----YPAIHIENGRHPVVEQQVRHFTANHTNL 596 Query 344 APKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVEL 403 K + + +L+GPN GGK+ M+ V +I L+A G FV D A I + IF + Sbjct 597 DHKHR------LMLLTGPNMGGKSTYMRQVALIVLLAHTGCFVPADAATIGPIDQIFTRI 650 Query 404 GDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSV 463 G + + STF +++ I A E SL+L+DE GT G+A+A + E+ Sbjct 651 GASDDLASNRSTFMVEMSETAYILHHATEQSLVLMDEVGRGTSTFDGLALAHAVAEHLLQ 710 Query 464 K-KATVIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIELAE 520 K K+ + TH+ L L + + N + + ++ +++ G G+SY I +A+ Sbjct 711 KNKSFSLFATHYFELTYLPEAHAAAVNMHLSALEQGQDIVFLHQIQPGPAGKSYGIAVAK 770 Query 521 RMGLNNNIIQKARTYY-GSESERMEN 545 GL ++ A+ + G E++ N Sbjct 771 LAGLPVRALKSAQKHLNGLENQAAAN 796 >RecName: Full=DNA mismatch repair protein msh-2 [Neurospora crassa OR74A] Sequence ID: O13396.1 Length: 937 Range 1: 586 to 853 Score:93.2 bits(230), Expect:5e-18, Method:Compositional matrix adjust., Identities:75/278(27%), Positives:129/278(46%), Gaps:37/278(13%) Query 283 SEILTQFDNII--ARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKC-IAN 339 + +L D I+ A I ++P+ + PR R L A+HP +++ I N Sbjct 586 AAVLAHLDVIVSFAHCSVHAPISYVRPK-IHPRGTG-RTVLTEARHPCMEVQDDVTFITN 643 Query 340 DLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENI 399 D+ L E S ++ +++GPN GGK+ ++ +G+IALMA+ G FV C AE+ +++I Sbjct 644 DVTLTR----EDSSFL-IITGPNMGGKSTYIRQIGVIALMAQIGCFVPCSSAELTIFDSI 698 Query 400 FVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLE 459 +G ++ + +STF + + I + A SLI++DE GT G +A + E Sbjct 699 LARVGASDSQLKGVSTFMAEMLETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISE 758 Query 460 YFSVKK--ATVIITTHFSNLKTLADNDSRFFNGSMEFEPH-------------------- 497 + VK+ + THF L LAD N + H Sbjct 759 HI-VKEIGCFALFATHFHELTALADQYPNVKN--LHVTAHISGTDTDTDVITDEDEKAKK 815 Query 498 --KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 ++ YK+ GI QS+ I +AE + + +++ A+ Sbjct 816 KREVTLLYKVEPGICDQSFGIHVAELVRFPDKVVRMAK 853 >RecName: Full=DNA mismatch repair protein MSH3; Short=AtMSH3; AltName: Full=MutS protein homolog 3 [Arabidopsis thaliana] Sequence ID: O65607.2 Length: 1081 Range 1: 605 to 1001 Score:93.6 bits(231), Expect:5e-18, Method:Compositional matrix adjust., Identities:95/418(23%), Positives:189/418(45%), Gaps:50/418(11%) Query 144 ELHAKLNKSVDMDGNIL------SSASPELHSARSRLEHAKRKIVEQLDEILKKQDIRNA 197 +L + LNK + G++L S PEL AR + + K+ + KK IRN Sbjct 605 KLLSALNKEAAVRGDLLDILITSSDQFPELAEARQAVLVIREKLDSSIASFRKKLAIRNL 664 Query 198 LQDDVWMLRDGHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDV 257 + + +++ + D K + + V+ + T+ P + +L A Sbjct 665 ---EFLQVSGITHLIELPVDSKVPMNWV--KVNSTKKTIRYHPPEIVAGLDELALA---- 715 Query 258 EVEEQRILRELSKDCYL-----VHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKP 312 E I+ S D +L + D ++ + L D + + + + + ++PEF+ Sbjct 716 -TEHLAIVNRASWDSFLKSFSRYYTDFKAAVQALAALDCLHSLSTLSRNKNYVRPEFVD- 773 Query 313 RDLNP-RFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAM 370 D P ++ + +HP+ + + ND L ++GE Y +++GPN GGK+ + Sbjct 774 -DCEPVEINIQSGRHPVLETILQDNFVPNDTIL--HAEGE---YCQIITGPNMGGKSCYI 827 Query 371 KTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQA 430 + V +I++MA+ G FV A++ + +F +G + + STF L++ I Sbjct 828 RQVALISIMAQVGSFVPASFAKLHVLDGVFTRMGASDSIQHGRSTFLEELSEASHIIRTC 887 Query 431 NELSLILLDEGFVGTDPAIGVAMARSTLEY-FSVKKATVIITTHFSNLKTLADNDSRFFN 489 + SL++LDE GT GVA+A +TL++ + K+ V+ TH+ + +++ F Sbjct 888 SSRSLVILDELGRGTSTHDGVAIAYATLQHLLAEKRCLVLFVTHYPEIAEISNG----FP 943 Query 490 GSM---------------EFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKA 532 GS+ ++ + YKL+ G+ +S+ ++A+ + + I++A Sbjct 944 GSVGTYHVSYLTLQKDKGSYDHDDVTYLYKLVRGLCSRSFGFKVAQLAQIPPSCIRRA 1001 >RecName: Full=DNA mismatch repair protein MutS [Pseudomonas protegens Pf-5] Sequence ID: Q4KHE3.1 Length: 859 Range 1: 569 to 794 Score:93.2 bits(230), Expect:5e-18, Method:Compositional matrix adjust., Identities:64/232(28%), Positives:112/232(48%), Gaps:16/232(6%) Query 314 DLN-PRF------SLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGG 365 DLN PRF + +HP+ + +ANDL L ++ + V++GPN GG Sbjct 569 DLNCPRFVSEPCMRITQGRHPVVEQVLTTPFVANDLSLDDNTR------MLVITGPNMGG 622 Query 366 KTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKR 425 K+ M+ +I L+A G FV E+ + IF +G + STF +++ Sbjct 623 KSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETAN 682 Query 426 ISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDS 485 I A E SL+L+DE GT G+++A + E + +A + TH+ L L +++ Sbjct 683 ILHNATERSLVLMDEVGRGTSTFDGLSLAWAAAERLAHLRAYTLFATHYFELTVLPESEP 742 Query 486 RFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY 535 N + H +++ + +L G QSY + +A+ G+ + +I +AR + Sbjct 743 LVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPSAVITRAREH 794 >RecName: Full=DNA mismatch repair protein MutS [Aromatoleum aromaticum EbN1] Sequence ID: Q5NYP9.1 Length: 879 Range 1: 587 to 815 Score:93.2 bits(230), Expect:5e-18, Method:Compositional matrix adjust., Identities:65/239(27%), Positives:115/239(48%), Gaps:14/239(5%) Query 299 AGVIHG-IKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWV 357 A V H + P+F P +I +HP+ + + I+N+ LAP + + + Sbjct 587 AAVRHSYVCPQF----SAQPGVDIIGGRHPVVERQVEDFISNNCRLAPTRR------MLL 636 Query 358 LSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFS 417 ++GPN GGK+ M+ V +IAL+A G FV A + + IF +G + STF Sbjct 637 ITGPNMGGKSTFMRQVALIALLAHVGAFVPARSARLGPLDAIFTRIGASDDLASGRSTFM 696 Query 418 GHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSN 476 + + I A E SL+L+DE GT G+A+A + + K + + TH+ Sbjct 697 VEMTEASAILHGATEQSLVLMDEIGRGTSTFDGLALAFAIARHLLEKNRCLTLFATHYFE 756 Query 477 LKTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 L L + N ++ H+++ + + +G QSY IE+A G+ +++++A+ Sbjct 757 LTRLNGDYPECANVHLDAVEHAHRIVFLHAVEDGPASQSYGIEVAALAGIPGSVVREAK 815 >RecName: Full=DNA mismatch repair protein MutS [Coxiella burnetii RSA 331] Sequence ID: A9NCN3.1 Length: 859 Range 1: 584 to 798 Score:93.2 bits(230), Expect:5e-18, Method:Compositional matrix adjust., Identities:64/223(29%), Positives:107/223(47%), Gaps:14/223(6%) Query 317 PRFSLINAKHPLFLLENKKC---IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 P + +HP+ +EN + ND HL K + + +++GPN GGK+ M+ Sbjct 584 PIIKIEAGRHPI--VENVMTDPFMPNDTHLDEKRR------MLIITGPNMGGKSTYMRQT 635 Query 374 GIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANEL 433 +I L+A G FV A++ + IF +G + STF + + I A E Sbjct 636 ALITLLAYIGSFVPAKNAQLGPIDRIFTRIGAADDLASGRSTFMVEMTETAAILHNATEE 695 Query 434 SLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSM 492 SL+L+DE GT G+++A + Y + K KA + TH+ L LA N + Sbjct 696 SLVLMDEVGRGTSTFDGLSLAYACASYLATKLKAFALFATHYFELTALASTLQAVKNVHL 755 Query 493 EFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 + H K++ + L G +SY +++A+ G+ ++IQ AR Sbjct 756 DAVEHEEKIIFLHALREGPANKSYGLQVAQLAGIPRSVIQHAR 798 >RecName: Full=DNA mismatch repair protein MSH1, mitochondrial; AltName: Full=MutS protein homolog 1; Flags: Precursor [Saccharomyces cerevisiae S288C] Sequence ID: P25846.2 Length: 959 Range 1: 766 to 959 Score:93.2 bits(230), Expect:5e-18, Method:Compositional matrix adjust., Identities:59/194(30%), Positives:98/194(50%), Gaps:11/194(5%) Query 355 VWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLS 414 +WV++GPN GGK+ ++ II ++A+ G FV C KA + + +F +G + ++S Sbjct 766 LWVITGPNMGGKSTFLRQNAIIVILAQIGCFVPCSKARVGIVDKLFSRVGSADDLYNEMS 825 Query 415 TFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEY-FSVKKATVIITTH 473 TF + + I + A E SL +LDE GT G+++A +TL+Y + + TH Sbjct 826 TFMVEMIETSFILQGATERSLAILDEIGRGTSGKEGISIAYATLKYLLENNQCRTLFATH 885 Query 474 FSN-LKTLADNDS--------RFF-NGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMG 523 F LK + DN +F+ +G + + +KL GI +S AI +AE G Sbjct 886 FGQELKQIIDNKCSKGMSEKVKFYQSGITDLGGNNFCYNHKLKPGICTKSDAIRVAELAG 945 Query 524 LNNNIIQKARTYYG 537 +++AR G Sbjct 946 FPMEALKEAREILG 959 >RecName: Full=DNA mismatch repair protein MutS [Coxiella burnetii Dugway 5J108-111] Sequence ID: A9KG24.1 Length: 859 Range 1: 584 to 798 Score:93.2 bits(230), Expect:5e-18, Method:Compositional matrix adjust., Identities:64/223(29%), Positives:107/223(47%), Gaps:14/223(6%) Query 317 PRFSLINAKHPLFLLENKKC---IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 P + +HP+ +EN + ND HL K + + +++GPN GGK+ M+ Sbjct 584 PIIKIEAGRHPI--VENVMTDPFMPNDTHLDEKRR------MLIITGPNMGGKSTYMRQT 635 Query 374 GIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANEL 433 +I L+A G FV A++ + IF +G + STF + + I A E Sbjct 636 ALITLLAYIGSFVPAKNAQLGPIDRIFTRIGAADDLASGRSTFMVEMTETAAILHNATEE 695 Query 434 SLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSM 492 SL+L+DE GT G+++A + Y + K KA + TH+ L LA N + Sbjct 696 SLVLMDEVGRGTSTFDGLSLAYACASYLATKLKAFALFATHYFELTALASTLPAVKNVHL 755 Query 493 EFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 + H K++ + L G +SY +++A+ G+ ++IQ AR Sbjct 756 DAVEHEEKIIFLHALREGPANKSYGLQVAQLAGIPRSVIQHAR 798 >RecName: Full=DNA mismatch repair protein MutS [Coxiella burnetii RSA 493] Sequence ID: Q83CQ2.1 Length: 859 Range 1: 584 to 798 Score:92.8 bits(229), Expect:6e-18, Method:Compositional matrix adjust., Identities:64/223(29%), Positives:107/223(47%), Gaps:14/223(6%) Query 317 PRFSLINAKHPLFLLENKKC---IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 P + +HP+ +EN + ND HL K + + +++GPN GGK+ M+ Sbjct 584 PIIKIEAGRHPI--VENVMTDPFMPNDTHLDEKRR------MLIITGPNMGGKSTYMRQT 635 Query 374 GIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANEL 433 +I L+A G FV A++ + IF +G + STF + + I A E Sbjct 636 ALITLLAYIGSFVPAKNAQLGPIDRIFTRIGAADDLASGRSTFMVEMTETAAILHNATEE 695 Query 434 SLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSM 492 SL+L+DE GT G+++A + Y + K KA + TH+ L LA N + Sbjct 696 SLVLMDEVGRGTSTFDGLSLAYACASYLATKLKAFALFATHYFELTALASTLQAVKNVHL 755 Query 493 EFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 + H K++ + L G +SY +++A+ G+ ++IQ AR Sbjct 756 DAVEHEEKIIFLHALREGPANKSYGLQVAQLAGIPRSVIQHAR 798 >RecName: Full=DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae serovar 7 str. AP76] Sequence ID: B3H2J9.1 Length: 864 Range 1: 548 to 789 Score:92.8 bits(229), Expect:6e-18, Method:Compositional matrix adjust., Identities:68/253(27%), Positives:126/253(49%), Gaps:16/253(6%) Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF--LLENKKCIANDLHL 343 L++ D + + A ++ ++P F R +N + +HP+ +L++ IAN + L Sbjct 548 LSELDVLTNLAERAESLNYVRPTFSLQRGVNIK----GGRHPVVEQVLKDP-FIANPVFL 602 Query 344 APKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVEL 403 + ++ V++GPN GGK+ M+ + +I+LMA G FV D AEI + IF + Sbjct 603 NAQR------HLLVVTGPNMGGKSTYMRQIALISLMAYIGSFVPADSAEIGALDRIFTRI 656 Query 404 GDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSV 463 G + STF + ++ I QA E SL+L+DE GT G+++A + E+ + Sbjct 657 GASDDLASGRSTFMVEMTEMANILHQATENSLVLIDEIGRGTSTYDGLSLAWACAEWLAK 716 Query 464 K-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIELAE 520 K ++ + TH+ L +L N ++ H+ ++ + + G +SY + +A Sbjct 717 KTQSLTLFATHYFELTSLPSQLKGVANVHLDAREHQDSIVFMHSVQEGAASKSYGLAVAA 776 Query 521 RMGLNNNIIQKAR 533 G+ +IQ A+ Sbjct 777 LAGVPKQVIQLAK 789 >RecName: Full=DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Sequence ID: B0BRS8.1 Length: 864 Range 1: 548 to 789 Score:92.8 bits(229), Expect:6e-18, Method:Compositional matrix adjust., Identities:68/253(27%), Positives:126/253(49%), Gaps:16/253(6%) Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF--LLENKKCIANDLHL 343 L++ D + + A ++ ++P F R +N + +HP+ +L++ IAN + L Sbjct 548 LSELDVLTNLAERAESLNYVRPTFSLQRGVNIK----GGRHPVVEQVLKDP-FIANPVFL 602 Query 344 APKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVEL 403 + ++ V++GPN GGK+ M+ + +I+LMA G FV D AEI + IF + Sbjct 603 NAQR------HLLVVTGPNMGGKSTYMRQIALISLMAYIGSFVPADSAEIGALDRIFTRI 656 Query 404 GDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSV 463 G + STF + ++ I QA E SL+L+DE GT G+++A + E+ + Sbjct 657 GASDDLASGRSTFMVEMTEMANILHQATENSLVLIDEIGRGTSTYDGLSLAWACAEWLAK 716 Query 464 K-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIELAE 520 K ++ + TH+ L +L N ++ H+ ++ + + G +SY + +A Sbjct 717 KTQSLTLFATHYFELTSLPSQLKGVANVHLDAREHQDSIVFMHSVQEGAASKSYGLAVAA 776 Query 521 RMGLNNNIIQKAR 533 G+ +IQ A+ Sbjct 777 LAGVPKQVIQLAK 789 >RecName: Full=DNA mismatch repair protein Msh2; AltName: Full=MutS protein homolog 2 [Rattus norvegicus] Sequence ID: P54275.1 Length: 933 Range 1: 540 to 845 Score:92.8 bits(229), Expect:7e-18, Method:Compositional matrix adjust., Identities:80/314(25%), Positives:144/314(45%), Gaps:22/314(7%) Query 234 STVFIEPQALAMQQAQL-----EKAQNDVEVEEQR--ILRELSKDCYLVHEDILSSSEIL 286 STV I+ + ++L E +N E EE + I++E+ E + + +++L Sbjct 540 STVDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTVNDVL 599 Query 287 TQFDNIIARTKFAGVIHGIKPEFLKPRDLNP---RFSLINAKHPLFLLENKKC-IANDLH 342 D +++ FA V + +++P L R + ++H +++ I ND+H Sbjct 600 AHLDAVVS---FAHVSNAAPVPYVRPVILEKGKGRIIVKASRHACVEVQHDVAFIPNDVH 656 Query 343 LAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVE 402 Q +++GPN GGK+ ++ G+I LMA+ G FV C+ AE+ + I Sbjct 657 FEKDKQ-----MFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILAR 711 Query 403 LGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFS 462 +G ++ + +STF + + I A + SLI++DE GT G +A + EY + Sbjct 712 VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA 771 Query 463 VK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPHKLLPT--YKLLNGIPGQSYAIELA 519 A + THF L LA N + + T Y++ G+ QS+ I +A Sbjct 772 TNIGAFCMFATHFHELTALASQIPTVNNLHVTALTTEETLTMLYQVKTGVCDQSFGIHVA 831 Query 520 ERMGLNNNIIQKAR 533 E ++I+ A+ Sbjct 832 ELANFPRHVIECAK 845 >RecName: Full=DNA mismatch repair protein MutS [Erwinia tasmaniensis Et1/99] Sequence ID: B2VG22.1 Length: 853 Range 1: 578 to 792 Score:92.8 bits(229), Expect:7e-18, Method:Compositional matrix adjust., Identities:64/222(29%), Positives:109/222(49%), Gaps:12/222(5%) Query 317 PRFSLINAKHPLF--LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVG 374 P L +HP+ +L++ IAN L L+P+ + + V++GPN GGK+ M+ Sbjct 578 PGIKLTGGRHPVVEQVLKDP-FIANPLSLSPQRR------MLVVTGPNMGGKSTYMRQAA 630 Query 375 IIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELS 434 +I LMA G FV ++A I + IF +G + STF + + I A E S Sbjct 631 LITLMAHIGSFVPAEQAIIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYS 690 Query 435 LILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSME 493 L+L+DE GT G+++A + E + + KA + TH+ L TL + N ++ Sbjct 691 LVLMDEIGRGTSTYDGLSLAWACAESLANRIKAMTLFATHYFELTTLPEQIEGVANVHLD 750 Query 494 FEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 H + + + G +SY + +A G+ ++I++AR Sbjct 751 AVEHGDTIAFMHSVQEGAASKSYGLAVAALAGVPKDVIKRAR 792 >RecName: Full=DNA mismatch repair protein MutS [Francisella tularensis subsp. holarctica OSU18] Sequence ID: Q0BNM7.1 Length: 855 Range 1: 618 to 834 Score:92.4 bits(228), Expect:8e-18, Method:Compositional matrix adjust., Identities:64/224(29%), Positives:111/224(49%), Gaps:14/224(6%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ V + +A G FV A+I D + I+ +G + STF Sbjct 618 IITGPNMGGKSTYMRQVAQLIFLAYIGSFVPASYADICDIDTIYTRIGASDDISSGRSTF 677 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSN 476 + + I A+ SL+++DE GT G+A+A++ E F+ A + TH+ Sbjct 678 MVEMTETAYILNNASAKSLVIMDEIGRGTSTFDGLALAKACAEKFAQMGAFTLFATHYFE 737 Query 477 LKTLADNDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKART 534 L LA N E + +K + +K + G +SY I++A+ G++ ++++ A+ Sbjct 738 LTELAKQYPNVCNIHFEAKEYKDNIYFMHKAVTGAAKKSYGIQVAKLAGISQDVLESAK- 796 Query 535 YYGSESERMENLLKELQLK-----RIEINEELTKQNLLTQKLDS 573 + + NL K+ QL + + E T QN L QKLD+ Sbjct 797 ------QNLYNLEKKQQLTESTQVQAQFQLEPTTQNPLQQKLDA 834 >RecName: Full=DNA mismatch repair protein MutS [Francisella tularensis subsp. holarctica FTNF002-00] Sequence ID: A7N9Y6.1 Length: 844 >RecName: Full=DNA mismatch repair protein MutS [Francisella tularensis subsp. holarctica LVS] Sequence ID: Q2A5B5.1 Length: 844 Range 1: 607 to 823 Score:92.4 bits(228), Expect:8e-18, Method:Compositional matrix adjust., Identities:64/224(29%), Positives:111/224(49%), Gaps:14/224(6%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ V + +A G FV A+I D + I+ +G + STF Sbjct 607 IITGPNMGGKSTYMRQVAQLIFLAYIGSFVPASYADICDIDTIYTRIGASDDISSGRSTF 666 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSN 476 + + I A+ SL+++DE GT G+A+A++ E F+ A + TH+ Sbjct 667 MVEMTETAYILNNASAKSLVIMDEIGRGTSTFDGLALAKACAEKFAQMGAFTLFATHYFE 726 Query 477 LKTLADNDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKART 534 L LA N E + +K + +K + G +SY I++A+ G++ ++++ A+ Sbjct 727 LTELAKQYPNVCNIHFEAKEYKDNIYFMHKAVTGAAKKSYGIQVAKLAGISQDVLESAK- 785 Query 535 YYGSESERMENLLKELQLK-----RIEINEELTKQNLLTQKLDS 573 + + NL K+ QL + + E T QN L QKLD+ Sbjct 786 ------QNLYNLEKKQQLTESTQVQAQFQLEPTTQNPLQQKLDA 823 >RecName: Full=DNA mismatch repair protein MutS [Pseudomonas syringae pv. syringae B728a] Sequence ID: Q4ZWP5.1 Length: 859 Range 1: 569 to 794 Score:92.4 bits(228), Expect:9e-18, Method:Compositional matrix adjust., Identities:63/232(27%), Positives:113/232(48%), Gaps:16/232(6%) Query 314 DLN-PRF------SLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGG 365 DLN PRF + +HP+ + + +ANDL L + S + V++GPN GG Sbjct 569 DLNCPRFVAEPCMRIEQGRHPVVEQVLSTPFVANDLAL------DDSTRMLVITGPNMGG 622 Query 366 KTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKR 425 K+ M+ +I L+A G FV E+ + IF +G + STF +++ Sbjct 623 KSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETAN 682 Query 426 ISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDS 485 I A + SL+L+DE GT G+++A + E + +A + TH+ L L +++ Sbjct 683 ILHNATDKSLVLMDEVGRGTSTFDGLSLAWAAAECLAQLRAYTLFATHYFELTVLPESEP 742 Query 486 RFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY 535 N + H +++ +++L G QSY + +A+ G+ +I +A+ + Sbjct 743 LVTNVHLNATEHNERIVFLHRVLPGPASQSYGLAVAQLAGVPGKVISRAKEH 794 >RecName: Full=DNA mismatch repair protein MutS [Roseobacter denitrificans OCh 114] Sequence ID: Q16D05.1 Length: 878 Range 1: 532 to 805 Score:92.4 bits(228), Expect:9e-18, Method:Compositional matrix adjust., Identities:77/284(27%), Positives:136/284(47%), Gaps:21/284(7%) Query 261 EQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFS 320 E+R+ L D I ++ L + D A A ++P+ D + F+ Sbjct 532 EKRLYETLKSDILACSARIAQTASALAELDLTTALATLATTDGWVRPKV----DDSRAFA 587 Query 321 LINAKHPLFLLENK-------KCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTV 373 + N +HP+ +EN IAND L S E + +++L+GPN GK+ ++ Sbjct 588 IENGRHPV--VENALRQQSGDPFIANDCDL---SAEEDAAQIYLLTGPNMAGKSTYLRQN 642 Query 374 GIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANEL 433 IIAL+A+ G FV A I +F +G + STF + + I QA++ Sbjct 643 AIIALLAQMGSFVPASCAHIGLISQLFSRVGASDDLARGRSTFMVEMVETAAILNQADDR 702 Query 434 SLILLDEGFVGTDPAIGVAMARSTLEYF-SVKKATVIITTHFSNLKTLADNDSRFFNGSM 492 +L++LDE GT G+++A +TLE+ V K+ + TH+ + LA N ++ Sbjct 703 ALVILDEIGRGTATYDGLSIAWATLEHLHDVNKSRALFATHYHEMTALAGKLPGVENATV 762 Query 493 ---EFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 E+E +++ +++ G +SY +++A+ GL +I +AR Sbjct 763 TVKEWE-GEVIFLHEVKMGAADRSYGVQVAQLAGLPPAVISRAR 805 >RecName: Full=DNA mismatch repair protein MutS [Neisseria meningitidis FAM18] Sequence ID: A1KWM6.1 Length: 864 Range 1: 547 to 796 Score:92.4 bits(228), Expect:9e-18, Method:Compositional matrix adjust., Identities:71/266(27%), Positives:124/266(46%), Gaps:20/266(7%) Query 284 EILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHL 343 ++L+ F + F ++PEF P + N +HP+ + + AN L Sbjct 547 DVLSTFSALAKERNF------VRPEFAD----YPVIHIENGRHPVVEQQVRHFTANHTDL 596 Query 344 APKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVEL 403 K + + +L+GPN GGK+ M+ V +I L+A G FV D A I + IF + Sbjct 597 DHKHR------LMLLTGPNMGGKSTYMRQVALIVLLAHTGCFVPADAATIGPIDQIFTRI 650 Query 404 GDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSV 463 G + + STF +++ I A E SL+L+DE GT G+A+A + E+ Sbjct 651 GASDDLASNRSTFMVEMSETAYILHHATEQSLVLMDEVGRGTSTFDGLALAHAVAEHLLQ 710 Query 464 K-KATVIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIELAE 520 K K+ + TH+ L L + + N + + ++ +++ G G+SY I +A+ Sbjct 711 KNKSFSLFATHYFELTYLPEAHAAAVNMHLSALEQGQDIVFLHQIQPGPAGKSYGIAVAK 770 Query 521 RMGLNNNIIQKARTYY-GSESERMEN 545 GL ++ A+ + G E++ N Sbjct 771 LAGLPVRALKSAQKHLNGLENQAAAN 796 >RecName: Full=DNA mismatch repair protein MutS [Buchnera aphidicola str. Sg (Schizaphis graminum)] Sequence ID: Q8K9D2.1 Length: 805 Range 1: 543 to 793 Score:92.0 bits(227), Expect:9e-18, Method:Compositional matrix adjust., Identities:77/263(29%), Positives:137/263(52%), Gaps:18/263(6%) Query 277 EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF--LLENK 334 ED+ +S+ L++ D ++ ++ + ++ + P+ K + +L+ ++HP+ LEN Sbjct 543 EDLKNSAFALSELDVLVNLSERSISLNYVCPKMTKKYGI----TLVESRHPVVECFLENP 598 Query 335 KCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQ 394 I+N + L+ K++ + +++GPN GGK+ M+ V +I +MA G FV A I Sbjct 599 -FISNSVDLSKKNR------MLIITGPNMGGKSTYMRQVALIIIMACIGSFVPAKYASIG 651 Query 395 DYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMA 454 + IF +G + STF + +I I A SLIL+DE GT G+A+A Sbjct 652 LIDKIFTRIGSADDVSNGYSTFMMEMTEISNILHNATCNSLILIDELGRGTSNKDGLALA 711 Query 455 RSTLEYFSVK-KATVIITTHFSNLKTLAD---NDSRFFNGSMEFEPHKLLPTYKLLNGIP 510 S +Y K K+ ++++THF L L + N F+ + E + + + YK+ GI Sbjct 712 WSCSKYLMTKNKSMILLSTHFIELTKLENFFKNIKNFYFSAFEHDSN-IAFLYKIKKGIS 770 Query 511 GQSYAIELAERMGLNNNIIQKAR 533 +SY I +A G+ + +IQ A+ Sbjct 771 KKSYGIAVASLSGIPDIVIQDAK 793 >RecName: Full=DNA mismatch repair protein MutS [Neisseria meningitidis MC58] Sequence ID: Q9JX94.1 Length: 864 Range 1: 547 to 796 Score:92.4 bits(228), Expect:1e-17, Method:Compositional matrix adjust., Identities:71/266(27%), Positives:124/266(46%), Gaps:20/266(7%) Query 284 EILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHL 343 ++L+ F + F ++PEF P + N +HP+ + + AN L Sbjct 547 DVLSTFSALAKERNF------VRPEFAD----YPVIHIENGRHPVVEQQVRHFTANHTDL 596 Query 344 APKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVEL 403 K + + +L+GPN GGK+ M+ V +I L+A G FV D A I + IF + Sbjct 597 DHKHR------LMLLTGPNMGGKSTYMRQVALIVLLAHTGCFVPADAATIGPIDQIFTRI 650 Query 404 GDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSV 463 G + + STF +++ I A E SL+L+DE GT G+A+A + E+ Sbjct 651 GASDDLASNRSTFMVEMSETAYILHHATEQSLVLMDEVGRGTSTFDGLALAHAVAEHLLQ 710 Query 464 K-KATVIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIELAE 520 K K+ + TH+ L L + + N + + ++ +++ G G+SY I +A+ Sbjct 711 KNKSFSLFATHYFELTYLPEAHTAAVNMHLSALEQGQDIVFLHQIQPGPAGKSYGIAVAK 770 Query 521 RMGLNNNIIQKARTYY-GSESERMEN 545 GL ++ A+ + G E++ N Sbjct 771 LAGLPVRALKSAQKHLNGLENQAAAN 796 >RecName: Full=DNA mismatch repair protein MutS [Pseudomonas savastanoi pv. phaseolicola 1448A] Sequence ID: Q48F92.1 Length: 859 Range 1: 569 to 794 Score:92.0 bits(227), Expect:1e-17, Method:Compositional matrix adjust., Identities:63/232(27%), Positives:113/232(48%), Gaps:16/232(6%) Query 314 DLN-PRF------SLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGG 365 DLN PRF + +HP+ + + +ANDL L + S + V++GPN GG Sbjct 569 DLNCPRFVAEPCMRIEQGRHPVVEQVLSTPFVANDLAL------DDSTRMLVITGPNMGG 622 Query 366 KTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKR 425 K+ M+ +I L+A G FV E+ + IF +G + STF +++ Sbjct 623 KSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETAN 682 Query 426 ISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDS 485 I A + SL+L+DE GT G+++A + E + +A + TH+ L L +++ Sbjct 683 ILHNATDKSLVLMDEVGRGTSTFDGLSLAWAAAECLAQLRAYTLFATHYFELTVLPESEP 742 Query 486 RFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY 535 N + H +++ +++L G QSY + +A+ G+ +I +A+ + Sbjct 743 LVSNVHLNATEHNERIVFLHRVLPGPASQSYGLAVAQLAGVPGKVISRAKEH 794 >RecName: Full=DNA mismatch repair protein MutS [Francisella tularensis subsp. mediasiatica FSC147] Sequence ID: B2SEQ6.1 Length: 844 Range 1: 607 to 823 Score:92.0 bits(227), Expect:1e-17, Method:Compositional matrix adjust., Identities:64/224(29%), Positives:111/224(49%), Gaps:14/224(6%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ V + +A G FV A+I D + I+ +G + STF Sbjct 607 IITGPNMGGKSTYMRQVAQLIFLAYIGSFVPASYADICDIDTIYTRIGASDDISSGRSTF 666 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSN 476 + + I A+ SL+++DE GT G+A+A++ E F+ A + TH+ Sbjct 667 MVEMTETAYILNNASAKSLVIMDEIGRGTSTFDGLALAKACAEKFAQIGAFTLFATHYFE 726 Query 477 LKTLADNDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKART 534 L LA N E + +K + +K + G +SY I++A+ G++ ++++ A+ Sbjct 727 LTELAKQYPNVCNIHFEAKEYKDNIYFMHKAVTGAAKKSYGIQVAKLAGISQDVLESAK- 785 Query 535 YYGSESERMENLLKELQLK-----RIEINEELTKQNLLTQKLDS 573 + + NL K+ QL + + E T QN L QKLD+ Sbjct 786 ------QNLYNLEKKQQLTESTQVQAQFQLEPTTQNPLQQKLDA 823 >RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS protein homolog 3 [Meyerozyma guilliermondii ATCC 6260] Sequence ID: A5DEV6.2 Length: 960 Range 1: 701 to 917 Score:92.0 bits(227), Expect:1e-17, Method:Compositional matrix adjust., Identities:63/222(28%), Positives:108/222(48%), Gaps:18/222(8%) Query 324 AKHPLF--LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAK 381 +++P+ L + +AND+ ++ V +++GPN GGK+ +K V +IALM + Sbjct 701 SRNPVIENLTSTSQYVANDIEISYDENR-----VLIITGPNMGGKSSYVKQVALIALMTQ 755 Query 382 AGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEG 441 G ++ C+ A + ++ I V +G N + STF +++ I + SL++LDE Sbjct 756 IGCYLPCESAIVGIFDTILVRMGAEDNILKGESTFMVEMSECSTIIKSLTNKSLVILDEI 815 Query 442 FVGTDPAIGVAMARSTLEYF--SVKKATVIITTHFSNLKTLAD----NDSRFFNGSMEF- 494 GT G+A+A S + Y + + TH+ +LK L D N + + G ME Sbjct 816 GRGTGTEDGIAIAYSIISYLIEEPRLPLTLFITHYPSLKVLEDTHPKNVANYHMGFMEVA 875 Query 495 ----EPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKA 532 E + Y L G+ SY + +A G+ + II KA Sbjct 876 KADQEWPDVTFLYTLKRGVVSNSYGLNVARLAGIPSEIITKA 917 >RecName: Full=DNA mismatch repair protein MutS [Francisella tularensis subsp. tularensis WY96-3418] Sequence ID: A4IXL2.1 Length: 844 Range 1: 607 to 823 Score:92.0 bits(227), Expect:1e-17, Method:Compositional matrix adjust., Identities:64/224(29%), Positives:111/224(49%), Gaps:14/224(6%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ V + +A G FV A+I D + I+ +G + STF Sbjct 607 IITGPNMGGKSTYMRQVAQLIFLAYIGSFVPASYADICDIDTIYTRIGASDDISSGRSTF 666 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSN 476 + + I A+ SL+++DE GT G+A+A++ E F+ A + TH+ Sbjct 667 MVEMTETAYILNNASAKSLVIMDEIGRGTSTFDGLALAKACAEKFAQIGAFTLFATHYFE 726 Query 477 LKTLADNDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKART 534 L LA N E + +K + +K + G +SY I++A+ G++ ++++ A+ Sbjct 727 LTELAKQYPNVCNIHFEAKEYKDNIYFMHKAVTGAAKKSYGIQVAKLAGISQDVLESAK- 785 Query 535 YYGSESERMENLLKELQLK-----RIEINEELTKQNLLTQKLDS 573 + + NL K+ QL + + E T QN L QKLD+ Sbjct 786 ------QNLYNLEKKQQLTESTQVQAQFQLEPTTQNPLQQKLDA 823 >RecName: Full=DNA mismatch repair protein MutS [Francisella tularensis subsp. tularensis FSC198] Sequence ID: Q14GB1.1 Length: 857 >RecName: Full=DNA mismatch repair protein MutS [Francisella tularensis subsp. tularensis SCHU S4] Sequence ID: Q5NEV8.1 Length: 857 Range 1: 618 to 834 Score:92.0 bits(227), Expect:1e-17, Method:Compositional matrix adjust., Identities:64/224(29%), Positives:111/224(49%), Gaps:14/224(6%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ V + +A G FV A+I D + I+ +G + STF Sbjct 618 IITGPNMGGKSTYMRQVAQLIFLAYIGSFVPASYADICDIDTIYTRIGASDDISSGRSTF 677 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSN 476 + + I A+ SL+++DE GT G+A+A++ E F+ A + TH+ Sbjct 678 MVEMTETAYILNNASAKSLVIMDEIGRGTSTFDGLALAKACAEKFAQIGAFTLFATHYFE 737 Query 477 LKTLADNDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKART 534 L LA N E + +K + +K + G +SY I++A+ G++ ++++ A+ Sbjct 738 LTELAKQYPNVCNIHFEAKEYKDNIYFMHKAVTGAAKKSYGIQVAKLAGISQDVLESAK- 796 Query 535 YYGSESERMENLLKELQLK-----RIEINEELTKQNLLTQKLDS 573 + + NL K+ QL + + E T QN L QKLD+ Sbjct 797 ------QNLYNLEKKQQLTESTQVQAQFQLEPTTQNPLQQKLDA 834 >RecName: Full=DNA mismatch repair protein MutS [Shewanella frigidimarina NCIMB 400] Sequence ID: Q086A1.1 Length: 861 Range 1: 587 to 794 Score:92.0 bits(227), Expect:1e-17, Method:Compositional matrix adjust., Identities:61/214(29%), Positives:102/214(47%), Gaps:10/214(4%) Query 324 AKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKA 382 +HP+ + IAN + L P+ Q + +++GPN GGK+ M+ V +I LMA Sbjct 587 GRHPVVERVSQAAFIANPVALTPQRQ------MLIVTGPNMGGKSTYMRQVALITLMAHI 640 Query 383 GLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGF 442 G FV D A+I + + IF +G + STF + + I A SL+L+DE Sbjct 641 GCFVPADHAQIGEIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATANSLVLMDEIG 700 Query 443 VGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KL 499 GT G+A+A S EY + A + TH+ L L + N ++ H + Sbjct 701 RGTSTYDGLALAWSAAEYLAKNVSALTLFATHYFELTQLPELLPSVINVHLDAIEHDDTI 760 Query 500 LPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 + + G +SY +++A G+ ++I+ A+ Sbjct 761 AFMHSVQEGAASKSYGLQVAALAGVPASVIKAAK 794 >RecName: Full=DNA mismatch repair protein MutS [Yersinia enterocolitica subsp. enterocolitica 8081] Sequence ID: A1JJU1.1 Length: 851 Range 1: 576 to 790 Score:91.7 bits(226), Expect:1e-17, Method:Compositional matrix adjust., Identities:59/221(27%), Positives:109/221(49%), Gaps:10/221(4%) Query 317 PRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGI 375 P + +HP+ + ++ I+N L L+P+ + + +++GPN GGK+ M+ + Sbjct 576 PGIKITGGRHPVVEQVLSEPFISNPLTLSPQRR------MLIITGPNMGGKSTYMRQTAL 629 Query 376 IALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSL 435 I L+A G +V D+A I + IF +G + STF + + I A E SL Sbjct 630 IVLLAHMGSYVPADQATIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSL 689 Query 436 ILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEF 494 +L+DE GT G+++A + E + + KA + TH+ L TL + N ++ Sbjct 690 VLMDEIGRGTSTYDGLSLAWACAENLASRIKAMTLFATHYFELTTLPEKMEGVVNVHLDA 749 Query 495 EPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 H + + + +G +SY + +A G+ ++I++AR Sbjct 750 LEHGETIAFMHSVQDGAASKSYGLAVAALAGVPRDVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Sequence ID: B8D9K7.1 Length: 802 Range 1: 582 to 792 Score:91.3 bits(225), Expect:2e-17, Method:Compositional matrix adjust., Identities:63/219(29%), Positives:107/219(48%), Gaps:14/219(6%) Query 320 SLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIAL 378 SL+ ++HP+ I N + L+ + + +++GPN GGK+ M+ + +I + Sbjct 582 SLLESRHPVVECFLKTPFIKNSVFLSRTQR------MIIITGPNMGGKSTYMRQIALIVI 635 Query 379 MAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILL 438 MA G FV A I + IF +G + STF + +I I A SL+L+ Sbjct 636 MAGIGSFVPARYALIGSIDKIFTRIGSADDLSNGYSTFMMEMMEISNILHNATSNSLVLI 695 Query 439 DEGFVGTDPAIGVAMARSTLEYF-SVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPH 497 DE GT G+++A S Y ++ K+ +++THF L L + + F + F Sbjct 696 DELGRGTSTNEGLSLAWSCSRYLININKSMTLLSTHFVELTKLEEKEK--FVKNFHFSAI 753 Query 498 K----LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKA 532 K + YK+ NGI +SY I +A GL +++++ A Sbjct 754 KSDLHIAFLYKIKNGISKKSYGISVASLSGLPDSVLEDA 792 >RecName: Full=DNA mismatch repair protein MutS [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Sequence ID: P57504.1 Length: 802 Range 1: 582 to 792 Score:91.3 bits(225), Expect:2e-17, Method:Compositional matrix adjust., Identities:63/219(29%), Positives:107/219(48%), Gaps:14/219(6%) Query 320 SLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIAL 378 SL+ ++HP+ I N + L+ + + +++GPN GGK+ M+ + +I + Sbjct 582 SLLESRHPVVECFLKTPFIKNSVFLSRTQR------MIIITGPNMGGKSTYMRQIALIVI 635 Query 379 MAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILL 438 MA G FV A I + IF +G + STF + +I I A SL+L+ Sbjct 636 MAGIGSFVPARYALIGSIDKIFTRIGSADDLSNGYSTFMMEMMEISNILHNATSNSLVLI 695 Query 439 DEGFVGTDPAIGVAMARSTLEYF-SVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPH 497 DE GT G+++A S Y ++ K+ +++THF L L + + F + F Sbjct 696 DELGRGTSTNEGLSLAWSCSRYLININKSMTLLSTHFVELTKLEEKEK--FVKNFHFSAI 753 Query 498 K----LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKA 532 K + YK+ NGI +SY I +A GL +++++ A Sbjct 754 KSDLHIAFLYKIKNGISKKSYGISVASLSGLPDSVLEDA 792 >RecName: Full=DNA mismatch repair protein MutS [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] Sequence ID: B8D7V9.1 Length: 802 Range 1: 582 to 792 Score:91.3 bits(225), Expect:2e-17, Method:Compositional matrix adjust., Identities:63/219(29%), Positives:107/219(48%), Gaps:14/219(6%) Query 320 SLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIAL 378 SL+ ++HP+ I N + L+ + + +++GPN GGK+ M+ + +I + Sbjct 582 SLLESRHPVVECFLKTPFIKNSVFLSRTQR------MIIITGPNMGGKSTYMRQIALIVI 635 Query 379 MAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILL 438 MA G FV A I + IF +G + STF + +I I A SL+L+ Sbjct 636 MAGIGSFVPARYALIGSIDKIFTRIGSADDLSNGYSTFMMEMMEISNILHNATSNSLVLI 695 Query 439 DEGFVGTDPAIGVAMARSTLEYF-SVKKATVIITTHFSNLKTLADNDSRFFNGSMEFEPH 497 DE GT G+++A S Y ++ K+ +++THF L L + + F + F Sbjct 696 DELGRGTSTNEGLSLAWSCSRYLININKSMTLLSTHFVELTKLEEKEK--FVKNFHFSAI 753 Query 498 K----LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKA 532 K + YK+ NGI +SY I +A GL +++++ A Sbjct 754 KSDLHIAFLYKIKNGISKKSYGISVASLSGLPDSVLEDA 792 >RecName: Full=DNA mismatch repair protein MutS [Pseudomonas syringae pv. tomato str. DC3000] Sequence ID: Q87XW6.1 Length: 855 Range 1: 565 to 790 Score:91.3 bits(225), Expect:2e-17, Method:Compositional matrix adjust., Identities:62/232(27%), Positives:113/232(48%), Gaps:16/232(6%) Query 314 DLN-PRF------SLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGG 365 DLN PRF + +HP+ + + +ANDL L + S + +++GPN GG Sbjct 565 DLNCPRFVAEPCMRIEQGRHPVVEQVLSTPFVANDLAL------DDSTRMLIITGPNMGG 618 Query 366 KTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKR 425 K+ M+ +I L+A G FV E+ + IF +G + STF +++ Sbjct 619 KSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETAN 678 Query 426 ISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDS 485 I A + SL+L+DE GT G+++A + E + +A + TH+ L L +++ Sbjct 679 ILHNATDKSLVLMDEVGRGTSTFDGLSLAWAAAECLAQLRAYTLFATHYFELTVLPESEP 738 Query 486 RFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY 535 N + H +++ +++L G QSY + +A+ G+ +I +A+ + Sbjct 739 LVNNVHLNATEHNERIVFLHRVLPGPASQSYGLAVAQLAGVPGKVITRAKEH 790 >RecName: Full=DNA mismatch repair protein MutS [Shewanella woodyi ATCC 51908] Sequence ID: B1KPS7.1 Length: 858 Range 1: 580 to 794 Score:90.9 bits(224), Expect:2e-17, Method:Compositional matrix adjust., Identities:61/221(28%), Positives:106/221(47%), Gaps:10/221(4%) Query 317 PRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGI 375 P + + +HP+ + IAN + L+P + + +++GPN GGK+ M+ V + Sbjct 580 PGIQIESGRHPVIEQVSQTPFIANPVTLSPARK------MLIVTGPNMGGKSTYMRQVAL 633 Query 376 IALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSL 435 I LMA G +V A I + IF +G + STF + + I A SL Sbjct 634 ITLMAHIGCYVPAQSATIGPVDRIFTRIGAADDLASGRSTFMVEMTETANILHNATPKSL 693 Query 436 ILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEF 494 +L+DE GT G+++A S EY + K +A + TH+ L L + S N ++ Sbjct 694 VLMDEIGRGTSTYDGLSLAWSAAEYLAQKIEAMTLFATHYFELTQLPELISNVANVHLDA 753 Query 495 EPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 H ++ + + +G +SY +++A G+ N +I A+ Sbjct 754 IEHGDTIVFMHAVQDGAASKSYGLQVAALAGVPNPVILAAK 794 >RecName: Full=DNA mismatch repair protein MutS [Citrobacter koseri ATCC BAA-895] Sequence ID: A8ANU8.1 Length: 853 Range 1: 533 to 790 Score:90.9 bits(224), Expect:3e-17, Method:Compositional matrix adjust., Identities:70/268(26%), Positives:125/268(46%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H ++ S+ L + D ++ + A ++ P F P + +HP+ Sbjct 533 DLLLPHLAELQQSANALAELDVLVNLAERAYTLNYTCPTFSD----KPGIRITEGRHPVV 588 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + N+ IAN L+L+P+ + + +++GPN GGK+ M+ +IAL+A G +V Sbjct 589 EQVLNEPFIANPLNLSPQRR------MLIITGPNMGGKSTYMRQTALIALLAYIGSYVPA 642 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 EI + IF +G + STF + + I A E SL+L+DE GT Sbjct 643 QSVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTY 702 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + K KA + TH+ L L + N ++ H + + + Sbjct 703 DGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSV 762 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 763 QDGAASKSYGLAVAALAGVPKEVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Methylococcus capsulatus str. Bath] Sequence ID: Q60BA1.1 Length: 854 Range 1: 569 to 792 Score:90.9 bits(224), Expect:3e-17, Method:Compositional matrix adjust., Identities:63/230(27%), Positives:110/230(47%), Gaps:11/230(4%) Query 309 FLKPRDLN-PRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGK 366 ++ PR ++ P +I +HP+ + + NDL P + + V++GPN GGK Sbjct 569 WVAPRLVDAPGIRIIGGRHPVVEQVGGTPFVPNDLAFGPNRR------MLVITGPNMGGK 622 Query 367 TVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRI 426 + M+ II LMA G V +AEI + I+ +G + STF + + I Sbjct 623 STYMRQAAIIVLMAHIGSHVPAAEAEIGPIDRIYTRIGASDDLAGGRSTFMVEMTETANI 682 Query 427 SEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDS 485 A SL+L+DE GT G+++A ++ E+ + + +A + TH+ L LA+ Sbjct 683 LNNATAESLVLMDEIGRGTSTFDGLSLAWASAEHLARETRAYTLFATHYFELTALAEECE 742 Query 486 RFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 N ++ H K++ + + G QSY +++A G+ +I AR Sbjct 743 DVGNVHLDAVEHGDKVVFLHAVREGPASQSYGLQVAALAGVPQTVIDNAR 792 >RecName: Full=DNA mismatch repair protein MutS [Yersinia pestis Pestoides F] Sequence ID: A4TQ04.1 Length: 851 >RecName: Full=DNA mismatch repair protein MutS [Yersinia pestis Angola] Sequence ID: A9R111.1 Length: 851 >RecName: Full=DNA mismatch repair protein MutS [Yersinia pestis Nepal516] Sequence ID: Q1CLQ9.1 Length: 851 >RecName: Full=DNA mismatch repair protein MutS [Yersinia pestis] Sequence ID: Q8ZBQ3.1 Length: 851 Range 1: 576 to 790 Score:90.9 bits(224), Expect:3e-17, Method:Compositional matrix adjust., Identities:59/221(27%), Positives:108/221(48%), Gaps:10/221(4%) Query 317 PRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGI 375 P ++ +HP+ + + I+N L L+P+ + + +++GPN GGK+ M+ + Sbjct 576 PGIKIMGGRHPVVEQVLKEPFISNPLTLSPQRR------MLIITGPNMGGKSTYMRQTAL 629 Query 376 IALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSL 435 I L+A G +V D+A I + IF +G + STF + + I A E SL Sbjct 630 IVLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSL 689 Query 436 ILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEF 494 +L+DE GT G+++A + E + + KA + TH+ L TL + N ++ Sbjct 690 VLMDEIGRGTSTYDGLSLAWACAENLASRIKAMTLFATHYFELTTLPEKMEGVVNVHLDA 749 Query 495 EPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 H + + + G +SY + +A G+ ++I++AR Sbjct 750 LEHGETIAFMHSVQEGAASKSYGLAVAALAGVPRDVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Yersinia pestis Antiqua] Sequence ID: Q1C471.1 Length: 854 Range 1: 576 to 790 Score:90.9 bits(224), Expect:3e-17, Method:Compositional matrix adjust., Identities:59/221(27%), Positives:108/221(48%), Gaps:10/221(4%) Query 317 PRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGI 375 P ++ +HP+ + + I+N L L+P+ + + +++GPN GGK+ M+ + Sbjct 576 PGIKIMGGRHPVVEQVLKEPFISNPLTLSPQRR------MLIITGPNMGGKSTYMRQTAL 629 Query 376 IALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSL 435 I L+A G +V D+A I + IF +G + STF + + I A E SL Sbjct 630 IVLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSL 689 Query 436 ILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEF 494 +L+DE GT G+++A + E + + KA + TH+ L TL + N ++ Sbjct 690 VLMDEIGRGTSTYDGLSLAWACAENLASRIKAMTLFATHYFELTTLPEKMEGVVNVHLDA 749 Query 495 EPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 H + + + G +SY + +A G+ ++I++AR Sbjct 750 LEHGETIAFMHSVQEGAASKSYGLAVAALAGVPRDVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Francisella tularensis subsp. novicida U112] Sequence ID: A0Q809.1 Length: 844 Range 1: 607 to 823 Score:90.5 bits(223), Expect:3e-17, Method:Compositional matrix adjust., Identities:63/220(29%), Positives:112/220(50%), Gaps:6/220(2%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ V + +A G FV A+I D + I+ +G + STF Sbjct 607 IITGPNMGGKSTYMRQVAQLIFLAYIGSFVPASYADICDIDTIYTRIGASDDISSGRSTF 666 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSN 476 + + I A+ SL+++DE GT G+A+A++ E F+ A + TH+ Sbjct 667 MVEMTETAYILNNASAKSLVIMDEIGRGTSTFDGLALAKACAEKFAQIGAFTLFATHYFE 726 Query 477 LKTLADNDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR- 533 L LA N E + +K + +K + G +SY I++A+ G++ ++++ A+ Sbjct 727 LTELAKQYPNVCNIHFEAKEYKDNIYFMHKAVTGAAKKSYGIQVAKLAGISQDVLESAKQ 786 Query 534 TYYGSESERMENLLKELQLKRIEINEELTKQNLLTQKLDS 573 Y E+ ++L + Q++ + E T QN L QKLD+ Sbjct 787 NLYN--LEKKQHLAESTQIQA-QFELEPTTQNPLQQKLDA 823 >RecName: Full=DNA mismatch repair protein MutS [Pseudomonas fluorescens Pf0-1] Sequence ID: Q3KH79.1 Length: 860 Range 1: 579 to 794 Score:90.5 bits(223), Expect:3e-17, Method:Compositional matrix adjust., Identities:59/222(27%), Positives:106/222(47%), Gaps:9/222(4%) Query 317 PRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGI 375 P + +HP+ + +ANDL L ++ + V++GPN GGK+ M+ + Sbjct 579 PCMRISQGRHPVVEQVLTTPFVANDLSLDDNTR------MLVITGPNMGGKSTYMRQTAL 632 Query 376 IALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSL 435 I L+A G FV E+ + IF +G + STF +++ I A E SL Sbjct 633 IVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNATERSL 692 Query 436 ILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEFE 495 +L+DE GT G+++A + E + +A + TH+ L L + + N + Sbjct 693 VLMDEVGRGTSTFDGLSLAWAAAERLAQLRAYTLFATHYFELTVLPEAEPLVANVHLNAT 752 Query 496 PH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY 535 H +++ + +L G QSY + +A+ G+ + +I +AR + Sbjct 753 EHNERIVFLHHVLPGPASQSYGLAVAQLAGVPSEVIVRAREH 794 >RecName: Full=DNA mismatch repair protein MutS [Neisseria gonorrhoeae FA 1090] Sequence ID: Q5F5J4.1 Length: 864 Range 1: 547 to 796 Score:90.5 bits(223), Expect:3e-17, Method:Compositional matrix adjust., Identities:70/266(26%), Positives:124/266(46%), Gaps:20/266(7%) Query 284 EILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHL 343 ++L+ F + F ++PEF P + N +HP+ + + AN L Sbjct 547 DVLSTFSALAKERNF------VRPEFAD----YPVVHIENGRHPVVEQQVRHFTANHTDL 596 Query 344 APKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVEL 403 K + + +L+GPN GGK+ M+ V +I L+A G FV D A I + IF + Sbjct 597 DHKHR------LMLLTGPNMGGKSTYMRQVALIVLLAHTGCFVPADAATIGPVDQIFTRI 650 Query 404 GDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSV 463 G + + STF +++ I A E S++L+DE GT G+A+A + E+ Sbjct 651 GASDDLASNRSTFMVEMSETAYILHHATEQSIVLMDEVGRGTSTFDGLALAHAIAEHLLQ 710 Query 464 K-KATVIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIELAE 520 K K+ + TH+ L L + + N + + ++ +++ G G+SY I +A+ Sbjct 711 KNKSFSLFATHYFELTYLPEAHAAAVNMHLSALEQGRDIVFLHQIQPGPAGKSYGIAVAK 770 Query 521 RMGLNNNIIQKARTYY-GSESERMEN 545 GL ++ A+ + G E++ N Sbjct 771 LAGLPVRALKAAQKHLNGLENQAAAN 796 >RecName: Full=DNA mismatch repair protein MutS [Yersinia pseudotuberculosis YPIII] Sequence ID: B1JJF1.1 Length: 851 Range 1: 576 to 790 Score:90.5 bits(223), Expect:3e-17, Method:Compositional matrix adjust., Identities:59/221(27%), Positives:108/221(48%), Gaps:10/221(4%) Query 317 PRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGI 375 P ++ +HP+ + + I+N L L+P+ + + +++GPN GGK+ M+ + Sbjct 576 PGIKIMGGRHPVVEQVLKEPFISNPLTLSPQRR------MLIITGPNMGGKSTYMRQTAL 629 Query 376 IALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSL 435 I L+A G +V D+A I + IF +G + STF + + I A E SL Sbjct 630 IVLLAHMGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSL 689 Query 436 ILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEF 494 +L+DE GT G+++A + E + + KA + TH+ L TL + N ++ Sbjct 690 VLMDEIGRGTSTYDGLSLAWACAENLASRIKAMTLFATHYFELTTLPEKMEGVANVHLDA 749 Query 495 EPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 H + + + G +SY + +A G+ ++I++AR Sbjct 750 LEHGETIAFMHSVQEGAASKSYGLAVAALAGVPRDVIKRAR 790 >RecName: Full=Probable DNA mismatch repair protein Msh6 [Drosophila melanogaster] Sequence ID: Q9VUM0.2 Length: 1190 Range 1: 822 to 1140 Score:90.5 bits(223), Expect:4e-17, Method:Compositional matrix adjust., Identities:90/331(27%), Positives:139/331(41%), Gaps:25/331(7%) Query 215 RADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYL 274 +A++ +EG +G S E +AL E +N V + R L E + Y Sbjct 822 KANKSYTLEGQTKGKKPSRRYTTAETRALLKDMQHAEDTRNMVLKDLARRLFEKFSNHYD 881 Query 275 VHEDILSSSEILTQFDNIIARTKFAG---VIHGIKPEFLKPRDLNPRFSLINAKHPLFLL 331 + + + + D + + ++AG VI PE + D P L HP Sbjct 882 QWKQCI---DCVANLDVLGSLAEYAGQQMVI--CVPELVSDAD-QPFIQLEEGYHPC--A 933 Query 332 ENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKA 391 I N L L S+ S +L+GPN GGK+ M+ VG++ +MA+ G + Sbjct 934 NASTYIPNGLELGTASEAPLS----LLTGPNMGGKSTLMREVGLLVIMAQIGAHIPAASC 989 Query 392 EIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGV 451 + + IF LG + + STF L + I + A SL+LLDE GT G Sbjct 990 RLSLVDRIFTRLGAQDDILAGHSTFLVELNETSLILKHATCHSLVLLDELGRGTATYDGT 1049 Query 452 AMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFNGSMEF--------EPHKLLPT- 502 A+A S + + + K + +TH+ NL ND R G M +P + T Sbjct 1050 AIAASVVNFLANLKCRTLFSTHYHNLIDFFHNDKRITLGHMACMVENEDNADPTQETVTF 1109 Query 503 -YKLLNGIPGQSYAIELAERMGLNNNIIQKA 532 YK G +SY A+ G+ II++A Sbjct 1110 LYKYTAGACPKSYGFNAAKLAGMPQGIIKRA 1140 >RecName: Full=DNA mismatch repair protein MutS [Yersinia pseudotuberculosis IP 31758] Sequence ID: A7FLX1.1 Length: 851 >RecName: Full=DNA mismatch repair protein MutS [Yersinia pseudotuberculosis PB1/+] Sequence ID: B2K584.1 Length: 851 >RecName: Full=DNA mismatch repair protein MutS [Yersinia pseudotuberculosis IP 32953] Sequence ID: Q66EB5.1 Length: 851 Range 1: 576 to 790 Score:90.1 bits(222), Expect:4e-17, Method:Compositional matrix adjust., Identities:59/221(27%), Positives:108/221(48%), Gaps:10/221(4%) Query 317 PRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGI 375 P ++ +HP+ + + I+N L L+P+ + + +++GPN GGK+ M+ + Sbjct 576 PGIKIMGGRHPVVEQVLKEPFISNPLTLSPQRR------MLIITGPNMGGKSTYMRQTAL 629 Query 376 IALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSL 435 I L+A G +V D+A I + IF +G + STF + + I A E SL Sbjct 630 IVLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSL 689 Query 436 ILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEF 494 +L+DE GT G+++A + E + + KA + TH+ L TL + N ++ Sbjct 690 VLMDEIGRGTSTYDGLSLAWACAENLASRIKAMTLFATHYFELTTLPEKMEGVANVHLDA 749 Query 495 EPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 H + + + G +SY + +A G+ ++I++AR Sbjct 750 LEHGETIAFMHSVQEGAASKSYGLAVAALAGVPRDVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Serratia proteamaculans 568] Sequence ID: A8G9Z9.1 Length: 851 Range 1: 576 to 790 Score:89.7 bits(221), Expect:5e-17, Method:Compositional matrix adjust., Identities:60/221(27%), Positives:107/221(48%), Gaps:10/221(4%) Query 317 PRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGI 375 P + +HP+ + ++ I+N L L+P+ + + +++GPN GGK+ M+ + Sbjct 576 PGVRITEGRHPVVEQVLSEPFISNPLSLSPQRR------MLIITGPNMGGKSTYMRQTAL 629 Query 376 IALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSL 435 I LMA G +V KA I + IF +G + STF + + I A E SL Sbjct 630 IVLMAHIGSYVPASKAVIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSL 689 Query 436 ILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEF 494 +L+DE GT G+++A + E + + KA + TH+ L TL + N ++ Sbjct 690 VLMDEIGRGTSTYDGLSLAWACAENLASRIKAMTLFATHYFELTTLPEKMEGVVNVHLDA 749 Query 495 EPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 H + + + +G +SY + +A G+ +I++AR Sbjct 750 LEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPREVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Rhodopseudomonas palustris BisB5] Sequence ID: Q13ED0.1 Length: 923 Range 1: 578 to 848 Score:89.7 bits(221), Expect:5e-17, Method:Compositional matrix adjust., Identities:69/275(25%), Positives:134/275(48%), Gaps:21/275(7%) Query 277 EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKC 336 +D+ +++ D A K A + ++PE D + F++ +HP+ K+ Sbjct 578 DDLRAAAHAFALLDVATALAKLAVSDNYVRPEV----DGSLAFAIEGGRHPVVEQALKRA 633 Query 337 ----IANDLHLAPKS-------QGET---SPYVWVLSGPNAGGKTVAMKTVGIIALMAKA 382 IAN L+P GE + +W+L+GPN GK+ ++ +IAL+A+ Sbjct 634 GEPFIANACDLSPVPPPFPPPLAGEGRVGAGQIWLLTGPNMAGKSTFLRQNALIALLAQT 693 Query 383 GLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGF 442 G FV +A I + +F +G + STF + + I QA E +L++LDE Sbjct 694 GSFVPASRARIGIVDRLFSRVGAADDLARGRSTFMVEMVETATILNQATERALVILDEIG 753 Query 443 VGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPHK--L 499 GT G+++A + +E+ + + + TH+ L L+ R FN ++ + + + Sbjct 754 RGTATFDGLSIAWAAIEHLHEQNRCRALFATHYHELTALSAKLPRLFNATVRVKEWRGEV 813 Query 500 LPTYKLLNGIPGQSYAIELAERMGLNNNIIQKART 534 + +++L G +SY I++A+ GL +++ +A++ Sbjct 814 VFLHEVLPGSADRSYGIQVAKLAGLPPSVVARAKS 848 >RecName: Full=DNA mismatch repair protein spellchecker 1 [Drosophila melanogaster] Sequence ID: P43248.4 Length: 917 Range 1: 597 to 846 Score:89.7 bits(221), Expect:6e-17, Method:Compositional matrix adjust., Identities:68/258(26%), Positives:119/258(46%), Gaps:15/258(5%) Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNP---RFSLINAKHPLF-LLENKKCIANDL 341 L Q D +++ FA +++P+ L L + +HP L E+ IAN + Sbjct 597 LAQLDCLVS---FAIAARSAPTPYVRPKMLEEGARELVLEDVRHPCLELQEHVNFIANSV 653 Query 342 HLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFV 401 + +++++GPN GGK+ +++VG LMA G FV C A I ++I Sbjct 654 DFKKEECN-----MFIITGPNMGGKSTYIRSVGTAVLMAHIGAFVPCSLATISMVDSILG 708 Query 402 ELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYF 461 +G N + LSTF + + I A + SL+++DE GT G +A S E+ Sbjct 709 RVGASDNIIKGLSTFMVEMIETSGIIRTATDKSLVIIDELGRGTSTYEGCGIAWSIAEHL 768 Query 462 SVK-KATVIITTHFSNLKTLADNDSRFFNGSME--FEPHKLLPTYKLLNGIPGQSYAIEL 518 + + K + THF + LA+ S N M + Y++ +G+ +S+ I++ Sbjct 769 AKETKCFTLFATHFHEITKLAETLSTVKNCHMAAVADADDFTLLYQVRSGVMEKSFGIQV 828 Query 519 AERMGLNNNIIQKARTYY 536 A +++Q A+ Y Sbjct 829 ARLANFPEHVVQNAQEVY 846 >RecName: Full=DNA mismatch repair protein MutS [Candidatus Solibacter usitatus Ellin6076] Sequence ID: Q01X96.1 Length: 869 Range 1: 586 to 800 Score:89.7 bits(221), Expect:6e-17, Method:Compositional matrix adjust., Identities:64/220(29%), Positives:112/220(50%), Gaps:12/220(5%) Query 321 LINAKHPLF--LLENK--KCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGII 376 ++ +HP+ L E + + I NDL+L +++ + +++GPN GGK+ ++ +I Sbjct 586 IMAGRHPVIERLTEQEAGRFIPNDLYL-----NDSTDLLAIITGPNMGGKSTYLRQAALI 640 Query 377 ALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLI 436 A++A+ G FV + A + + IF +G N STF + + I A S I Sbjct 641 AILAQIGSFVPAESASLPVIDRIFTRIGASDNLARGRSTFMVEMTETAVILNTATPRSFI 700 Query 437 LLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDS--RFFNGSME 493 +LDE GT G+A+A + +EY + +A + TH+ L LA+ S R S++ Sbjct 701 VLDEVGRGTATYDGLALAWAVVEYIHQRTRAKTLFATHYHELTELAEQLSGVRNLMVSVK 760 Query 494 FEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 ++ K+ G +SY IE+A GL ++I++AR Sbjct 761 EAGDHIIFLRKVEPGKADRSYGIEVARLAGLPISVIERAR 800 >RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS protein homolog 3 [Eremothecium gossypii ATCC 10895] Sequence ID: Q759V4.1 Length: 1032 Range 1: 730 to 977 Score:89.7 bits(221), Expect:6e-17, Method:Compositional matrix adjust., Identities:65/257(25%), Positives:132/257(51%), Gaps:19/257(7%) Query 286 LTQFDNIIARTKFAGVIHGIKPEF-LKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLA 344 L+ +D I++ + + ++P+F P+ +N +IN ++P+ + + + ND++L Sbjct 730 LSTYDCILSLAATSCNVDYVRPKFNTAPQCIN----VINGRNPIIESLDVRYMPNDVNLN 785 Query 345 PKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELG 404 + + + +++GPN GGK+ ++ V ++ +MA+ G +V +AE ++ IF +G Sbjct 786 REGKK-----IMIITGPNMGGKSSYIRQVALLVIMAQIGCYVPAQEAEFSIFDQIFTRIG 840 Query 405 DRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYF-SV 463 N + STF + ++ +I + E SL+LLDE GT G++++ + L YF + Sbjct 841 AYDNLLRNDSTFKIEMTEMVQILRSSTENSLLLLDEVGRGTGTHDGISISYALLRYFIEL 900 Query 464 KKAT--VIITTHFSNLKTLADNDSRFFNGSM--EFEPHKLLPT----YKLLNGIPGQSYA 515 A ++ TH+++L ++ ++ S E P + P+ YKL G SY Sbjct 901 HNACPLILFITHYASLGSIRSPILGNYHMSYIEEKRPGENWPSVVFLYKLKEGRAHNSYG 960 Query 516 IELAERMGLNNNIIQKA 532 + +A+ + II +A Sbjct 961 LNVAKLADIQTGIINRA 977 >RecName: Full=DNA mismatch repair protein MutS [Colwellia psychrerythraea 34H] Sequence ID: Q47WN0.1 Length: 872 Range 1: 564 to 808 Score:89.4 bits(220), Expect:7e-17, Method:Compositional matrix adjust., Identities:64/255(25%), Positives:122/255(47%), Gaps:14/255(5%) Query 283 SEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF-LLENKKCIANDL 341 S+ + + D + + A ++ +KP ++ P S+ +H + + N IAN + Sbjct 564 SQAIAELDVLTTFAERALALNYVKPSLVE----EPGISIDAGRHVVVEQMTNDAFIANPV 619 Query 342 HLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFV 401 L + + + +++GPN GGK+ M+ +I L+A G +V D A I + IF Sbjct 620 LLTEQRK------MLIITGPNMGGKSTYMRQTALIVLLAHIGCYVPADNATIGLVDRIFT 673 Query 402 ELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYF 461 +G + STF + + I A + SL+LLDE GT G+++A + E Sbjct 674 RIGASDDLASGRSTFMVEMTETANILHNATDKSLVLLDEIGRGTSTYDGLSLAWACAEML 733 Query 462 SVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIEL 518 ++K KA + TH+ L LA S N ++ H ++ + + G +S+ +++ Sbjct 734 ALKTKAFTLFATHYFELTLLAGQISTLANVHLDAMEHDDNIVFMHAVQEGAASKSFGLQV 793 Query 519 AERMGLNNNIIQKAR 533 A+ G+ +I++A+ Sbjct 794 AQLAGVPKTVIKRAK 808 >RecName: Full=DNA mismatch repair protein MutS [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Sequence ID: C4K6P7.1 Length: 854 Range 1: 580 to 790 Score:89.0 bits(219), Expect:9e-17, Method:Compositional matrix adjust., Identities:58/217(27%), Positives:106/217(48%), Gaps:10/217(4%) Query 321 LINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALM 379 + +HP+ + + IAN + L+P+ + + +++GPN GGK+ M+ +I L+ Sbjct 580 ITGGRHPVVEQVSKQPFIANPISLSPERR------MLIITGPNMGGKSTYMRQTALIVLL 633 Query 380 AKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLD 439 A G FV DKA I + IF +G + STF + + I A E SL+L+D Sbjct 634 AHIGSFVPADKAIIGSVDRIFTRIGAADDLASGRSTFMVEMTETANILHNATEKSLVLMD 693 Query 440 EGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEF--EP 496 E GT G+++A + E S+ K+ + TH+ L +L + + N ++ + Sbjct 694 EIGRGTSTYDGLSLAWACAENLSIHIKSMTLFATHYFELTSLPEKINGIVNVHLQALEQG 753 Query 497 HKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 ++ + + G +SY + +A G+ +I +AR Sbjct 754 DEIAFMHSVHEGAASKSYGLAVAALAGVPKKVIDRAR 790 >RecName: Full=DNA mismatch repair protein MSH2; AltName: Full=MUS1 [Zea mays] Sequence ID: Q9XGC9.1 Length: 942 Range 1: 632 to 855 Score:89.0 bits(219), Expect:9e-17, Method:Compositional matrix adjust., Identities:66/229(29%), Positives:110/229(48%), Gaps:20/229(8%) Query 321 LINAKHPLFLLENK-KCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALM 379 L+ ++HP ++ I ND L +G++ + +++GPN GGK+ ++ VG+ LM Sbjct 632 LLGSRHPCLEAQDGVNFIPNDCTLV---RGKS--WFQIITGPNMGGKSTFIRQVGVNVLM 686 Query 380 AKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLD 439 A+ G FV CD+A I + IF +G + +STF + + I + A++ SLI++D Sbjct 687 AQVGSFVPCDQASISVRDCIFARVGAGDCQLHGVSTFMQEMLETASILKGASDKSLIIID 746 Query 440 EGFVGTDPAIGVAMARSTLEYF-SVKKATVIITTHFSNLKTLAD-NDSRF---------- 487 E GT G +A + E+ V +A + THF L LA ND Sbjct 747 ELGRGTSTYDGFGLAWAICEHLMEVTRAPTLFATHFHELTALAHRNDDEHQHISDIGVAN 806 Query 488 FNGSMEFEP--HKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKART 534 ++ +P KL YK+ G QS+ I +AE ++ A++ Sbjct 807 YHVGAHIDPLSRKLTMLYKVEPGACDQSFGIHVAEFANFPEAVVALAKS 855 >RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS protein homolog 3 [Lodderomyces elongisporus NRRL YB-4239] Sequence ID: A5DYV8.1 Length: 993 Range 1: 755 to 983 Score:89.0 bits(219), Expect:1e-16, Method:Compositional matrix adjust., Identities:64/234(27%), Positives:110/234(47%), Gaps:29/234(12%) Query 323 NAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKA 382 NA+HP+ +AND+ + S V V++GPN GGK+ +K V ++ +M + Sbjct 755 NARHPIIEHLRDGYVANDIDIRYDSNR-----VLVITGPNMGGKSSYVKMVALLIIMTQI 809 Query 383 GLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGF 442 G ++ C+ A I +++I + +G N + STF + + I ++ SL++LDE Sbjct 810 GCYIPCEAATIGIFDSILIRMGASDNLLKGRSTFMTEMLECSNIIQKLTPRSLVILDEIG 869 Query 443 VGTDPAIGVAMARSTLEYF--SVKKATVIITTHFS------------------NLKTLAD 482 GT G ++A + L Y S K V+ TH++ NL T D Sbjct 870 RGTGSIDGYSLAYAILRYLVESKLKPIVLCITHYTGLLSETEDEKFDKDAKDENLDTGDD 929 Query 483 NDSRFFNGSMEF-EPHKLLPTYKLL-NGIPG--QSYAIELAERMGLNNNIIQKA 532 ++ G E +P ++ P L N PG SY +++A+ GL ++ +A Sbjct 930 VVKSYYMGYEEITQPGQVFPEIVFLYNLCPGVSNSYGLQVAKMAGLPKKVLLEA 983 >RecName: Full=DNA mismatch repair protein MutS [Neisseria meningitidis 053442] Sequence ID: A9M4L8.1 Length: 864 Range 1: 547 to 785 Score:89.0 bits(219), Expect:1e-16, Method:Compositional matrix adjust., Identities:67/255(26%), Positives:118/255(46%), Gaps:19/255(7%) Query 284 EILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHL 343 ++L+ F + F ++PEF P + N +HP+ + + AN +L Sbjct 547 DVLSTFSALAKERNF------VRPEFAD----YPVIHIENGRHPVVEQQVRHFTANHTNL 596 Query 344 APKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVEL 403 K + + +L+GPN GGK+ M+ V +I L+A G FV D A I + IF + Sbjct 597 DHKHR------LMLLTGPNMGGKSTYMRQVALIVLLAHTGCFVPADAATIGPIDQIFTRI 650 Query 404 GDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSV 463 G + + STF +++ I A E SL+L+DE GT G+A+A + E+ Sbjct 651 GASDDLASNRSTFMVEMSETAYILHHATEQSLVLMDEVGRGTSTFDGLALAHAVAEHLLQ 710 Query 464 K-KATVIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIELAE 520 K K+ + TH+ L L + + N + + ++ + + G +SY I +A+ Sbjct 711 KNKSFSLFATHYFELTKLPEAHATAVNMHLSALEQGQDIVFLHHIEPGPASKSYGIAVAK 770 Query 521 RMGLNNNIIQKARTY 535 GL ++ A+ + Sbjct 771 LAGLPVRALKSAQKH 785 >RecName: Full=DNA mismatch repair protein MutS [Shewanella baltica OS195] Sequence ID: A9KYG1.1 Length: 856 Range 1: 615 to 794 Score:88.6 bits(218), Expect:1e-16, Method:Compositional matrix adjust., Identities:53/180(29%), Positives:91/180(50%), Gaps:3/180(1%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ V +I LMA G FV D+A I + IF +G + STF Sbjct 615 IVTGPNMGGKSTYMRQVALITLMAHIGCFVPADRALIGPIDRIFTRIGASDDLASGRSTF 674 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFS 475 + + I A+ SL+L+DE GT G+++A S EY + + A + TH+ Sbjct 675 MVEMTETANILHNASASSLVLMDEIGRGTSTYDGLSLAWSAAEYLAQQVGAMTLFATHYF 734 Query 476 NLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 L L + + +N ++ H + + + G +SY +++A G+ N +I+ A+ Sbjct 735 ELTQLPELMAGVYNVHLDAIEHDDTIAFMHAVQEGAASKSYGLQVAALAGVPNKVIKAAK 794 >RecName: Full=DNA mismatch repair protein MutS [Shewanella baltica OS185] Sequence ID: A6WR19.1 Length: 856 Range 1: 615 to 794 Score:88.2 bits(217), Expect:1e-16, Method:Compositional matrix adjust., Identities:53/180(29%), Positives:90/180(50%), Gaps:3/180(1%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ V +I LMA G FV D+A I + IF +G + STF Sbjct 615 IVTGPNMGGKSTYMRQVALITLMAHIGCFVPADRALIGPIDRIFTRIGASDDLASGRSTF 674 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFS 475 + + I A SL+L+DE GT G+++A S EY + + A + TH+ Sbjct 675 MVEMTETANILHNATASSLVLMDEIGRGTSTYDGLSLAWSAAEYLAQQVGAMTLFATHYF 734 Query 476 NLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 L L + + +N ++ H + + + G +SY +++A G+ N +I+ A+ Sbjct 735 ELTQLPELMAGVYNVHLDAIEHDDTIAFMHAVQEGAASKSYGLQVAALAGVPNKVIKAAK 794 >RecName: Full=DNA mismatch repair protein MutS [Haemophilus influenzae Rd KW20] Sequence ID: P44834.1 Length: 861 Range 1: 547 to 792 Score:88.2 bits(217), Expect:2e-16, Method:Compositional matrix adjust., Identities:63/255(25%), Positives:120/255(47%), Gaps:12/255(4%) Query 282 SSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDL 341 +S L++ D ++ + A ++ + P F + + N +HP+ + + D Sbjct 547 ASLALSELDVLVNLAERADTLNYVMPTFCDEVSVKIK----NGRHPVV-----EQVLKDP 597 Query 342 HLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFV 401 +A + + ++ V++GPN GGK+ M+ +I L+A G FV D A I + IF Sbjct 598 FIANPVELNHNRHLLVITGPNMGGKSTYMRQTALITLLAYIGSFVPADSARIGPIDRIFT 657 Query 402 ELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYF 461 +G + STF + ++ I QA SL+L+DE GT G+++A + E+ Sbjct 658 RIGASDDLASGRSTFMVEMTEMANILHQATAQSLVLIDEIGRGTSTYDGLSLAWACAEWL 717 Query 462 SVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIEL 518 S K ++ + TH+ L L + N ++ H + + + NG +SY + + Sbjct 718 SKKIRSLTLFATHYFELTALPEQLEGIANIHLDALEHNNTIAFMHAVQNGAASKSYGLAV 777 Query 519 AERMGLNNNIIQKAR 533 A G+ ++I+ A+ Sbjct 778 AALAGVPQSVIKLAK 792 >RecName: Full=DNA mismatch repair protein MutS [Dechloromonas aromatica RCB] Sequence ID: Q47DJ8.1 Length: 860 Range 1: 504 to 796 Score:88.2 bits(217), Expect:2e-16, Method:Compositional matrix adjust., Identities:79/305(26%), Positives:137/305(44%), Gaps:20/305(6%) Query 237 FIEPQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYL-VHEDILSSSEILTQFDNIIAR 295 +I P+ A + L + + E ++L E D L V + + + + Q D + Sbjct 504 YITPELKAFEDKALSAQERSLARE--KLLYEAILDALLPVVPTLQTIARAIAQLDLLAGF 561 Query 296 TKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLE----NKKCIANDLHLAPKSQGET 351 + A + KPEF L S+ +HP+ E + IAND LA + Sbjct 562 AESALKRNWCKPEFAAETQL----SITGGRHPVVEGELTNQAETFIANDCLLAENRR--- 614 Query 352 SPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREE 411 + +++GPN GGK+ M+ V +IAL+A G +V D+ + + IF +G + Sbjct 615 ---LLLITGPNMGGKSTYMRQVALIALLAHIGCYVPADRCVLGPLDRIFTRIGASDDLAS 671 Query 412 DLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVII 470 STF + + I A SL+L+DE GT G+A+A + L + K ++ + Sbjct 672 GRSTFMVEMTEAAAILHHATNQSLVLMDEIGRGTSTFDGMALAFAILRHLIEKNQSLTLF 731 Query 471 TTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNI 528 TH+ L L+ S N + H +++ + + G QSY I++A G+ + Sbjct 732 ATHYFELTRLSHEYSELANVHLGAVEHNDRIVFMHAVEEGPANQSYGIQVAALAGIPTAV 791 Query 529 IQKAR 533 ++ AR Sbjct 792 VRAAR 796 >RecName: Full=DNA mismatch repair protein MutS [Neisseria gonorrhoeae NCCP11945] Sequence ID: B4RPP9.1 Length: 864 Range 1: 547 to 796 Score:87.8 bits(216), Expect:2e-16, Method:Compositional matrix adjust., Identities:69/266(26%), Positives:123/266(46%), Gaps:20/266(7%) Query 284 EILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHL 343 ++L+ F + F ++PEF P + N +HP+ + + AN L Sbjct 547 DVLSTFSALAKERNF------VRPEFAD----YPVVHIENGRHPVVEQQVRHFTANHTDL 596 Query 344 APKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVEL 403 K + + +L+GPN GGK+ M+ V +I L+A G FV D A I + IF + Sbjct 597 DHKHR------LMLLTGPNMGGKSTYMRQVALIVLLAHTGCFVPADAATIGPVDQIFTRI 650 Query 404 GDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSV 463 G + + STF +++ I A E ++L+DE GT G+A+A + E+ Sbjct 651 GASDDLASNRSTFMVEMSETAYILHHATEQIIVLMDEVGRGTSTFDGLALAHAIAEHLLQ 710 Query 464 K-KATVIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIELAE 520 K K+ + TH+ L L + + N + + ++ +++ G G+SY I +A+ Sbjct 711 KNKSFSLFATHYFELTYLPEAHAAAVNMHLSALEQGRDIVFLHQIQPGPAGKSYGIAVAK 770 Query 521 RMGLNNNIIQKARTYY-GSESERMEN 545 GL ++ A+ + G E++ N Sbjct 771 LAGLPVRALKAAQKHLNGLENQAAAN 796 >RecName: Full=DNA mismatch repair protein MutS [Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821] Sequence ID: Q5NL79.2 Length: 869 Range 1: 579 to 793 Score:87.8 bits(216), Expect:2e-16, Method:Compositional matrix adjust., Identities:61/224(27%), Positives:110/224(49%), Gaps:19/224(8%) Query 319 FSLINAKHPL----FLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVG 374 F +I +HP+ + ++ +AN+ +L PK++ +W+++GPN GGK+ ++ Sbjct 579 FDVIQGRHPVVENALVKSGERFVANNTNLDPKNR------LWLVTGPNMGGKSTFLRQNA 632 Query 375 IIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELS 434 ++A++A+ G FV +KA I + +F +G N STF + + I QA S Sbjct 633 LLAVLAQTGSFVPAEKARIGLVDRLFSRVGASDNLARGRSTFMVEMVETAAILSQATNRS 692 Query 435 LILLDEGFVGTDPAIGVAMARSTLEYF-SVKKATVIITTHFSNLKTLADNDSRFFNGSME 493 ++LDE GT G+A+A + +E + + TH+ L L SR S+ Sbjct 693 FVILDEVGRGTSTYDGLAIAWAVVEAVHDINACRCLFATHYHELTQLT---SRLPALSLH 749 Query 494 FEPHK-----LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKA 532 K L+ +++ G +SY IE+A GL ++++A Sbjct 750 HVRAKEWQGDLVLLHEMAEGAADRSYGIEVARLAGLPPVVLKRA 793 >RecName: Full=DNA mismatch repair protein MutS [Shewanella sp. MR-7] Sequence ID: Q0HXG1.1 Length: 861 Range 1: 615 to 794 Score:87.8 bits(216), Expect:2e-16, Method:Compositional matrix adjust., Identities:53/180(29%), Positives:91/180(50%), Gaps:3/180(1%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ V +I LMA G FVS D+A I + IF +G + STF Sbjct 615 IVTGPNMGGKSTYMRQVALITLMAHIGCFVSADRAIIGPIDRIFTRIGASDDLASGRSTF 674 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFS 475 + + I A SL+L+DE GT G+++A S EY + + A + TH+ Sbjct 675 MVEMTETANILHNATAQSLVLMDEIGRGTSTYDGLSLAWSAAEYLAQQIGAMTLFATHYF 734 Query 476 NLKTLADNDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 L L + + +N ++ H+ + + + G +SY +++A G+ +I+ A+ Sbjct 735 ELTQLPELMAGVYNVHLDAIEHEDTIAFMHAVQEGAASKSYGLQVASLAGVPARVIKAAK 794 >RecName: Full=DNA mismatch repair protein MutS [Proteus mirabilis HI4320] Sequence ID: B4F220.1 Length: 854 Range 1: 545 to 791 Score:87.8 bits(216), Expect:2e-16, Method:Compositional matrix adjust., Identities:66/257(26%), Positives:123/257(47%), Gaps:14/257(5%) Query 281 SSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF-LLENKKCIAN 339 +S+E L + D + + A ++ +PE + + + +HP+ + ++ I+N Sbjct 545 TSAEALAETDVLANLAERAESLNYTRPELTEKTGIQ----ITGGRHPVVEQVLSEPFISN 600 Query 340 DLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENI 399 L LAP+ + + +++GPN GGK+ M+ +I L+A G FV +KA I + I Sbjct 601 PLQLAPQRR------LLIITGPNMGGKSTYMRQAALITLLAYIGSFVPAEKAVIGPIDRI 654 Query 400 FVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLE 459 F +G + STF + + I A E SL+L+DE GT G+++A + E Sbjct 655 FTRVGASDDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAE 714 Query 460 YFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAI 516 + + KA + TH+ L TL + N ++ H + + + G +SY + Sbjct 715 NLANRIKAMTLFATHYFELTTLPEKLEGTANIHLDAVEHGETIAFMHSVQEGAASKSYGL 774 Query 517 ELAERMGLNNNIIQKAR 533 +A G+ +I++A+ Sbjct 775 AVAALAGVPKEVIRRAK 791 >RecName: Full=DNA mismatch repair protein MutS [Photorhabdus laumondii subsp. laumondii TTO1] Sequence ID: Q7N8K0.1 Length: 851 Range 1: 533 to 790 Score:87.8 bits(216), Expect:2e-16, Method:Compositional matrix adjust., Identities:69/268(26%), Positives:124/268(46%), Gaps:15/268(5%) Query 271 DCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H ++ +S+E L + D + + A ++ I P P + +HP+ Sbjct 533 DLLLPHLAELQTSAEALAELDVLANLAERAETLNYICPTLSD----KPGIQITGGRHPVV 588 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + + I+N L L+ + + + +++GPN GGK+ M+ +I L+A G FV Sbjct 589 EQVLREPFISNPLSLSSQRR------LLIITGPNMGGKSTYMRQAALITLLAYIGSFVPA 642 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 +KA I + IF +G + STF + + I A E SL+L+DE GT Sbjct 643 EKAVIGPVDRIFTRVGASDDLASGRSTFMVEMTETANILHNATEQSLVLMDEIGRGTSTY 702 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + + KA + TH+ L TL + N ++ H + + + Sbjct 703 DGLSLAWACAENLANRIKAMTLFATHYFELTTLPEKLEGVVNIHLDAVEHGDTIAFMHSV 762 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 G +SY + +A G+ +I++AR Sbjct 763 QEGAASKSYGLAVASLAGVPREVIKRAR 790 >RecName: Full=DNA mismatch repair protein MutS [Actinobacillus succinogenes 130Z] Sequence ID: A6VL76.1 Length: 858 Range 1: 542 to 787 Score:87.4 bits(215), Expect:3e-16, Method:Compositional matrix adjust., Identities:67/258(26%), Positives:123/258(47%), Gaps:18/258(6%) Query 282 SSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFS--LINAKHPLF-LLENKKCIA 338 SS L + D + + A ++ + PEF +P + N +HP+ + + IA Sbjct 542 SSMTLAELDVLTNLAERAETLNYVCPEF------SPEIGVEIQNGRHPVVEQVLKEPFIA 595 Query 339 NDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYEN 398 N + L P+ + + V++GPN GGK+ M+ +I LMA G FV ++A I + Sbjct 596 NPVCLNPQRR------LLVITGPNMGGKSTYMRQTALITLMAYMGGFVPAERAVIGPIDR 649 Query 399 IFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTL 458 IF +G + STF + ++ I QA SL+L+DE GT G+++A + Sbjct 650 IFTRIGASDDLASGRSTFMVEMTEMANILHQATADSLVLIDEIGRGTSTYDGLSLAWACA 709 Query 459 EYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYA 515 E+ + K ++ + TH+ L L + + N ++ H + + + +G +SY Sbjct 710 EWLAKKLRSLTLFATHYFELTVLPEQFAGTANVHLDALEHDNTIAFMHAVQDGAASKSYG 769 Query 516 IELAERMGLNNNIIQKAR 533 + +A G+ +I+ A+ Sbjct 770 LAVAALAGVPQQVIKLAK 787 >RecName: Full=DNA mismatch repair protein MutS [Paraglaciecola sp. T6c] Sequence ID: Q15QR9.1 Length: 889 Range 1: 568 to 816 Score:87.8 bits(216), Expect:3e-16, Method:Compositional matrix adjust., Identities:64/259(25%), Positives:123/259(47%), Gaps:14/259(5%) Query 279 ILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF-LLENKKCI 337 ++ S++ L + D + + A + +PE ++ FS +HP+ + + I Sbjct 568 LMQSADALAELDVLTNLAERAESLDYHRPELCPQSGIH--FS--QGRHPVVEQVSDAPFI 623 Query 338 ANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYE 397 AN +++ P + + V++GPN GGK+ M+ +I LMA G ++ A+I + Sbjct 624 ANPINVNPDRR------MLVITGPNMGGKSTYMRQTALIVLMAYIGSYIPAQDAQIGPID 677 Query 398 NIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARST 457 IF +G + STF + + I A SL+L+DE GT G+++A + Sbjct 678 RIFTRIGASDDLASGRSTFMVEMTETANILNNATANSLVLMDEIGRGTSTYDGLSLAWAC 737 Query 458 LEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSY 514 EY + K ++ + TH+ L LAD N ++ H + + + +G +SY Sbjct 738 AEYLATKLQSFTLFATHYFELTGLADALPELANVHLDAVEHGESIRFMHAVQDGAANKSY 797 Query 515 AIELAERMGLNNNIIQKAR 533 +++A+ G+ ++Q A+ Sbjct 798 GLQVAQLAGVPKLVVQAAK 816 >RecName: Full=DNA mismatch repair protein MutS [Pseudoalteromonas translucida TAC125] Sequence ID: Q3IDC8.1 Length: 861 Range 1: 582 to 797 Score:87.4 bits(215), Expect:3e-16, Method:Compositional matrix adjust., Identities:58/222(26%), Positives:109/222(49%), Gaps:10/222(4%) Query 316 NPRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVG 374 N S+ +HP+ + + IAN + L + + + +++GPN GGK+ M+ Sbjct 582 NDNISIKQGRHPVVEQVMKEPFIANPVELNAQRK------MLIITGPNMGGKSTYMRQTA 635 Query 375 IIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELS 434 +I LMA G +V D A+I + + IF +G + STF + + I A S Sbjct 636 LIVLMAHIGSYVPADSAKIGNIDRIFTRIGASDDLASGRSTFMVEMTETATILNNATAQS 695 Query 435 LILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSME 493 L+L+DE GT G+++A +T ++ + K A + TH+ L LA+ N ++ Sbjct 696 LVLMDEIGRGTSTYDGLSLAYATADHLASKISAKTLFATHYFELTELAEQTPGLVNVHLD 755 Query 494 FEPHK--LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 H + + +L+G +S+ +++A G+ ++I +A+ Sbjct 756 AIEHNDTIAFMHTVLDGAASKSFGLQVAALAGVPRSVINQAK 797 >RecName: Full=DNA mismatch repair protein MutS [Haemophilus influenzae 86-028NP] Sequence ID: Q4QML2.1 Length: 861 Range 1: 547 to 792 Score:87.4 bits(215), Expect:3e-16, Method:Compositional matrix adjust., Identities:61/255(24%), Positives:121/255(47%), Gaps:12/255(4%) Query 282 SSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDL 341 +S L++ D ++ + A ++ + P F + + N +HP+ + + D Sbjct 547 ASLALSELDVLVNLAECADTLNYVMPTFCDEVSVK----IENGRHPVV-----EQVLKDP 597 Query 342 HLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFV 401 +A + + ++ +++GPN GGK+ M+ +I L+A G FV D A I + IF Sbjct 598 FIANPVELNHNRHLLIITGPNMGGKSTYMRQTALITLLAYIGSFVPADSARIGPIDRIFT 657 Query 402 ELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYF 461 +G + STF + ++ I QA E SL+L+DE GT G+++A + E+ Sbjct 658 RIGASDDLASGRSTFMVEMTEMANILHQATEQSLVLIDEIGRGTSTYDGLSLAWACAEWL 717 Query 462 SVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIEL 518 + K ++ + TH+ L L + N ++ H + + + +G +SY + + Sbjct 718 AKKIRSLTLFATHYFELTALPEQLEGIANIHLDALEHNNSIAFMHAVQDGAASKSYGLAV 777 Query 519 AERMGLNNNIIQKAR 533 A G+ ++I+ A+ Sbjct 778 AALAGVPQSVIKLAK 792 >RecName: Full=DNA mismatch repair protein MutS [Histophilus somni 129PT] Sequence ID: Q0I1B8.1 Length: 856 Range 1: 538 to 787 Score:87.4 bits(215), Expect:3e-16, Method:Compositional matrix adjust., Identities:67/261(26%), Positives:124/261(47%), Gaps:16/261(6%) Query 278 DILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF--LLENKK 335 D+ +S L + D + + A ++ ++P+F L ++ +HP+ +L++ Sbjct 538 DLQLASLTLAELDVLTNLAERAETLNYVQPQFSTQIGLQ----IMQGRHPVVEQVLKDP- 592 Query 336 CIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQD 395 IAN + L K ++ +++GPN GGK+ M+ +I LMA G FV + A I Sbjct 593 FIANPVELNQKR------HLLIITGPNMGGKSTYMRQTALITLMAYIGSFVPAESAVIGP 646 Query 396 YENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMAR 455 + IF +G + STF + ++ I QA E SL+L+DE GT G+++A Sbjct 647 IDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEQSLVLIDEIGRGTSTYDGLSLAW 706 Query 456 STLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQ 512 + E + K ++ + TH+ L L + N ++ H + + + G + Sbjct 707 ACAEQLAQKIRSLTLFATHYFELTVLPEKIDGIHNVHLDAIEHNDNIAFMHSIQEGAASK 766 Query 513 SYAIELAERMGLNNNIIQKAR 533 SY + +A G+ N+I+ A+ Sbjct 767 SYGLAVAALAGVPQNVIKSAK 787 >RecName: Full=DNA mismatch repair protein MutS [Haemophilus influenzae PittEE] Sequence ID: A5UE20.1 Length: 861 Range 1: 535 to 792 Score:87.0 bits(214), Expect:3e-16, Method:Compositional matrix adjust., Identities:65/267(24%), Positives:125/267(46%), Gaps:13/267(4%) Query 271 DCYLVHEDILS-SSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H L +S L++ D ++ + A ++ + P F + + N +HP+ Sbjct 535 DLLLPHLGALQLASLALSELDVLVNLAERADTLNYVMPTFCDEVSVK----IENGRHPVV 590 Query 330 LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCD 389 + + D +A + + ++ +++GPN GGK+ M+ +I L+A G FV D Sbjct 591 -----EQVLKDPFIANPVELNHNRHLLIITGPNMGGKSTYMRQTALITLLAYIGSFVPAD 645 Query 390 KAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAI 449 A I + IF +G + STF + ++ I QA E SL+L+DE GT Sbjct 646 SARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEQSLVLIDEIGRGTSTYD 705 Query 450 GVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKLL 506 G+++A + E+ + K ++ + TH+ L L + N ++ H + + + Sbjct 706 GLSLAWACAEWLAKKIRSLTLFATHYFELTALPEQLEGIVNIHLDALEHNNSIAFMHAVQ 765 Query 507 NGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ ++I+ A+ Sbjct 766 DGAASKSYGLAVAALAGVPQSVIKLAK 792 >RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS protein homolog 3 [Nakaseomyces glabratus CBS 138] Sequence ID: Q6FVN6.1 Length: 1025 Range 1: 662 to 1017 Score:87.4 bits(215), Expect:4e-16, Method:Compositional matrix adjust., Identities:81/370(22%), Positives:175/370(47%), Gaps:35/370(9%) Query 218 RKSGIEGIPRGVSQSGSTV----FIEPQA---LAMQQAQLEKAQNDVEVEEQRILRELSK 270 R + ++GIP + +T F+ P+ + + + Q + N++ E + L ++ Sbjct 662 RNTQVKGIPSDWVKVNNTKMISRFLTPRTKELVELLEYQNDLLYNEISKEYDQFLNRIAS 721 Query 271 DCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLI-NAKHPLF 329 V I++ L ++D +++ + + +P F D N + + A++P+ Sbjct 722 YYNEVKTFIMN----LAEYDCLLSLAAVSCNVGYTRPVF---TDSNEQLIIAKQARNPII 774 Query 330 LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCD 389 + ND+ + K G V V++GPN GGK+ ++ + ++ +MA+ G +V + Sbjct 775 ESLGVDYVPNDIEM-EKDSGR----VLVITGPNMGGKSSYIRQIALMVIMAQIGSYVPAE 829 Query 390 KAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAI 449 ++ ++N+ +G + N + STF L++ I +L+LLDE GT Sbjct 830 SLKLSVFDNVLTRIGSQDNILQGQSTFKVELSETVEIINSCTSKTLLLLDEVGRGTSTRD 889 Query 450 GVAMARSTLEYFSVKKAT--VIITTHFSNLKTLADNDSRFFNGSMEFEPHK--------L 499 G A+A + ++YF ++ ++ TTHF+ + T+ + ++ M + HK + Sbjct 890 GNAIAWALIKYFVEEEQCPFILFTTHFTIVTTVKSPLLKSYH--MNYVQHKNENENWTTV 947 Query 500 LPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY---YGSESERMENLLKELQLKRIE 556 + Y+L G+ SY + +A+ G++ +II +A Y +++E N++ +++ I Sbjct 948 VFLYQLKAGVTDSSYGLNVAKLAGIDTHIINRAHDVAISYKNDTEFDTNMILFQKVRNIL 1007 Query 557 INEELTKQNL 566 N ++ L Sbjct 1008 ANRTTARETL 1017 >RecName: Full=DNA mismatch repair protein MutS [[Haemophilus] ducreyi 35000HP] Sequence ID: Q7VKA1.1 Length: 866 Range 1: 548 to 789 Score:87.0 bits(214), Expect:4e-16, Method:Compositional matrix adjust., Identities:67/259(26%), Positives:124/259(47%), Gaps:28/259(10%) Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF-LLENKKCIANDLHLA 344 L++ D ++ + A +H ++P F R +N + +HP+ + + IAN + L Sbjct 548 LSELDVLVNLAERAESLHYVRPSFSLQRGINIK----AGRHPVVEHVMVEPFIANTVFL- 602 Query 345 PKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELG 404 + ++ +++GPN GGK+ M+ +I LMA G FV + AEI + IF +G Sbjct 603 -----NSQRHLLIVTGPNMGGKSTYMRQTALICLMAYIGSFVPAESAEIGVIDRIFTRIG 657 Query 405 DRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK 464 + STF + ++ I QA S++L+DE GT G+A+A + E+ + K Sbjct 658 ASDDLASGRSTFMVEMTEMANILHQATAQSVVLIDEIGRGTSTYDGLALACACAEWLANK 717 Query 465 -KATVIITTHF-------SNLKTLADN--DSRFFNGSMEFEPHKLLPTYKLLNGIPGQSY 514 ++ + TH+ S LK +A+ D+ +N ++ F + + G +SY Sbjct 718 TQSLTLFATHYFELTSLPSQLKGVANVHLDACEYNDTIAF-------MHSVQEGAASKSY 770 Query 515 AIELAERMGLNNNIIQKAR 533 + +A G+ +I A+ Sbjct 771 GLAVAALAGVPKQVIALAK 789 >RecName: Full=DNA mismatch repair protein MutS [Histophilus somni 2336] Sequence ID: B0UWV7.1 Length: 859 Range 1: 541 to 790 Score:87.0 bits(214), Expect:4e-16, Method:Compositional matrix adjust., Identities:66/260(25%), Positives:122/260(46%), Gaps:14/260(5%) Query 278 DILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF-LLENKKC 336 D+ +S L + D + + A ++ ++P+F L ++ +HP+ + + Sbjct 541 DLQLASLTLAELDVLTNLAERAETLNYVQPQFSTQVGLQ----IMQGRHPVVEQVLKEPF 596 Query 337 IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDY 396 IAN + L K ++ +++GPN GGK+ M+ +I LMA G FV + A I Sbjct 597 IANPVELNQKR------HLLIITGPNMGGKSTYMRQTALITLMAYIGSFVPAESAVIGPI 650 Query 397 ENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARS 456 + IF +G + STF + ++ I QA E SL+L+DE GT G+++A + Sbjct 651 DRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEQSLVLIDEIGRGTSTYDGLSLAWA 710 Query 457 TLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQS 513 E + K ++ + TH+ L L + N ++ H + + + G +S Sbjct 711 CAEQLAQKIRSLTLFATHYFELTGLPEKIEGIHNVHLDAFEHNDSIAFMHSVQEGAASKS 770 Query 514 YAIELAERMGLNNNIIQKAR 533 Y + +A G+ N+I+ A+ Sbjct 771 YGLAVAALAGVPQNVIKSAK 790 >RecName: Full=DNA mismatch repair protein MutS [Aliivibrio salmonicida LFI1238] Sequence ID: B6ENH6.1 Length: 855 Range 1: 612 to 791 Score:86.7 bits(213), Expect:4e-16, Method:Compositional matrix adjust., Identities:52/180(29%), Positives:90/180(50%), Gaps:3/180(1%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ +IALMA G +V D A I + IF +G + STF Sbjct 612 IITGPNMGGKSTYMRQTALIALMAHVGCYVPADSAHIGLLDRIFTRIGASDDLASGRSTF 671 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFS 475 + + I A + SL+L+DE GT G+++A ++ E+ + K A + TH+ Sbjct 672 MVEMTETANILHNATQHSLVLMDEIGRGTSTYDGLSLAWASAEWLATKINAMTLFATHYF 731 Query 476 NLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 L L + S N ++ H ++ + + G +SY + +A G+ +I+KA+ Sbjct 732 ELTELPNLFSGLANVHLDAVEHGDEIAFMHAVQEGAANKSYGLAVASLAGVPKAVIKKAK 791 >RecName: Full=DNA mismatch repair protein MutS [Shewanella baltica OS223] Sequence ID: B8E8U0.1 Length: 856 Range 1: 615 to 794 Score:86.7 bits(213), Expect:5e-16, Method:Compositional matrix adjust., Identities:53/180(29%), Positives:89/180(49%), Gaps:3/180(1%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ V +I LMA G FV D A I + IF +G + STF Sbjct 615 IVTGPNMGGKSTYMRQVALITLMAHIGCFVPADCALIGPIDRIFTRIGASDDLASGRSTF 674 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFS 475 + + I A SL+L+DE GT G+++A S EY + + A + TH+ Sbjct 675 MVEMTETANILHNATASSLVLMDEIGRGTSTYDGLSLAWSAAEYLAQQVGAMTLFATHYF 734 Query 476 NLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 L L + + +N ++ H + + + G +SY +++A G+ N +I+ A+ Sbjct 735 ELTQLPELMAGVYNVHLDAIEHDDTIAFMHAVQEGAASKSYGLQVAALAGVPNKVIKAAK 794 >RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS protein homolog 3 [Yarrowia lipolytica CLIB122] Sequence ID: Q6CHE5.1 Length: 990 Range 1: 700 to 963 Score:86.7 bits(213), Expect:5e-16, Method:Compositional matrix adjust., Identities:77/286(27%), Positives:130/286(45%), Gaps:27/286(9%) Query 252 KAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLK 311 KA D+E R C +E S ++QFD + A K +G +K +++ Sbjct 700 KAACDIEFNMFR------SRCATHYEFFRSMVVAMSQFDCLFALAKVSGQSGWVKADYVD 753 Query 312 PRDLNPRFSLINAKHPLF--LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVA 369 ++ L +++H + L+ N I+ND+ + + V++GPN GGK+ Sbjct 754 EGGID----LKDSRHVITEKLMTNY--ISNDIKIRCPT---------VVTGPNMGGKSSL 798 Query 370 MKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQ 429 ++ + + L+A G +V KA+I ++I +G + N STF L + I Sbjct 799 VRQIALSVLLAHIGCYVPASKAQIPITDSILCRMGAQDNIMSGQSTFMVELCECAEILRN 858 Query 430 ANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSNLKTLADNDSRFFN 489 A SL+LLDE GT G+A+A S L++F +A + TH+ L L D++ Sbjct 859 ATSKSLVLLDEIGRGTTTTDGIAIAHSVLKHFIELEALTLFITHYP-LGQLLDSEDSNKC 917 Query 490 GSMEFEPHKLLP---TYKLLNGIPGQSYAIELAERMGLNNNIIQKA 532 + + P TYK+ G SY + +A G+ II +A Sbjct 918 DLVHMDITNTNPPIFTYKMKPGSATDSYGLNVAGLAGIPQAIINRA 963 >RecName: Full=DNA mismatch repair protein MutS [Vibrio parahaemolyticus RIMD 2210633] Sequence ID: Q87LQ9.1 Length: 853 Range 1: 582 to 790 Score:86.3 bits(212), Expect:6e-16, Method:Compositional matrix adjust., Identities:57/215(27%), Positives:104/215(48%), Gaps:10/215(4%) Query 324 AKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKA 382 +HP+ + + IAN + L+P + + +++GPN GGK+ M+ +IALMA Sbjct 582 GRHPVVEQVTSDPFIANPIELSPSRK------MLIITGPNMGGKSTYMRQTALIALMAHI 635 Query 383 GLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGF 442 G +V + A+I + IF +G + STF + + I A + SL+L+DE Sbjct 636 GSYVPAESAQIGSLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATKNSLVLMDEIG 695 Query 443 VGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KL 499 GT G+++A ++ E+ + + A + TH+ L L + N ++ H + Sbjct 696 RGTSTYDGLSLAWASAEWLATQIGAMTLFATHYFELTELPNLLPNLANVHLDAVEHGDSI 755 Query 500 LPTYKLLNGIPGQSYAIELAERMGLNNNIIQKART 534 + + G +SY + +A G+ +I+ ART Sbjct 756 AFMHAVQEGAASKSYGLAVAGLAGVPKTVIKNART 790 >RecName: Full=DNA mismatch repair protein MutS [Edwardsiella ictaluri 93-146] Sequence ID: C5BGI4.1 Length: 852 Range 1: 533 to 790 Score:86.3 bits(212), Expect:6e-16, Method:Compositional matrix adjust., Identities:70/268(26%), Positives:123/268(45%), Gaps:15/268(5%) Query 271 DCYLVHEDILS-SSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF 329 D L H L S+ L + D + + A ++P+ + +N + +HP+ Sbjct 533 DLLLPHLAALQQSATALAELDVLSGLAERADRYGYVRPQLSERTGIN----IDEGRHPVV 588 Query 330 -LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSC 388 + + IAN L L+ + + V++GPN GGK+ M+ +I LMA G FV Sbjct 589 EQVLREPFIANPLTLSGARR------MLVITGPNMGGKSTYMRQAALIVLMAHIGSFVPA 642 Query 389 DKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPA 448 +A I + IF +G + STF + + I A E SL+L+DE GT Sbjct 643 QRAVIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTY 702 Query 449 IGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKL 505 G+++A + E + + KA + TH+ L TL + +N ++ H + + + Sbjct 703 DGLSLAWACAESLASRIKAMTLFATHYFELTTLPEKLEGVYNVHLDALEHGETIAFMHSV 762 Query 506 LNGIPGQSYAIELAERMGLNNNIIQKAR 533 +G +SY + +A G+ +I++AR Sbjct 763 QDGAASKSYGLAVAALAGVPREVIKRAR 790 >RecName: Full=DNA mismatch repair protein Msh3; AltName: Full=MutS protein homolog 3 [Dictyostelium discoideum] Sequence ID: Q1ZXH0.1 Length: 1428 Range 1: 1107 to 1365 Score:86.7 bits(213), Expect:7e-16, Method:Compositional matrix adjust., Identities:68/265(26%), Positives:122/265(46%), Gaps:24/265(9%) Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF--LLE--NKKCIANDL 341 ++ D + + K + + I+P+F+K + + + N +HP+ +L + + N + Sbjct 1107 ISNLDCLFSLAKVSSLEGYIRPQFVKEKK-DGGIQIENGRHPVVEAILSGSDGSYVPNTI 1165 Query 342 HLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFV 401 L E++ +++GPN GGK+ ++ +I +MA+ G FV + ++ I+ Sbjct 1166 ELR-----ESACKSMIITGPNMGGKSSLLRQTALIVIMAQVGCFVPATSCSLSVFDAIYT 1220 Query 402 ELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYF 461 +G R + STF L + I + + + +L++LDE GT GVA+A STL+Y Sbjct 1221 RMGARDSIGTGKSTFFIELEETSDILKNSTQNTLVILDELGRGTSTNDGVAIAYSTLKYI 1280 Query 462 -SVKKATVIITTHFSNLKTL----ADNDSRFFNGSMEFEPH---------KLLPTYKLLN 507 V K + TH+ L L F G +E + K++ YKL+ Sbjct 1281 VEVMKCYCLFVTHYPLLAQLELQYPTQVGNFHMGYLEEKQDQQLQKSVIPKVIFLYKLVK 1340 Query 508 GIPGQSYAIELAERMGLNNNIIQKA 532 G SY + +A GL +I A Sbjct 1341 GAAQNSYGLNIARLAGLPMEVIADA 1365 >RecName: Full=DNA mismatch repair protein MutS [Shewanella sp. W3-18-1] Sequence ID: A1RHG2.1 Length: 856 >RecName: Full=DNA mismatch repair protein MutS [Shewanella putrefaciens CN-32] Sequence ID: A4Y934.1 Length: 856 Range 1: 615 to 794 Score:86.3 bits(212), Expect:7e-16, Method:Compositional matrix adjust., Identities:52/180(29%), Positives:90/180(50%), Gaps:3/180(1%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ V +I LMA G FV ++A I + IF +G + STF Sbjct 615 IVTGPNMGGKSTYMRQVALITLMAHIGCFVPAERAVIGPIDRIFTRIGASDDLASGRSTF 674 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFS 475 + + I A SL+L+DE GT G+++A S EY + + A + TH+ Sbjct 675 MVEMTETANILHNATAQSLVLMDEIGRGTSTYDGLSLAWSAAEYLAQQIGAMTLFATHYF 734 Query 476 NLKTLADNDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 L L D + +N ++ H+ + + + G +SY +++A G+ +I+ A+ Sbjct 735 ELTQLPDLMAGVYNVHLDAIEHEDTIAFMHAVQEGAASKSYGLQVAALAGVPAKVIKAAK 794 >RecName: Full=DNA mismatch repair protein MutS [Dichelobacter nodosus VCS1703A] Sequence ID: A5EX62.1 Length: 861 Range 1: 420 to 788 Score:85.9 bits(211), Expect:8e-16, Method:Compositional matrix adjust., Identities:92/392(23%), Positives:173/392(44%), Gaps:38/392(9%) Query 156 DGNILSSAS-PELHSARSRLEHAKRKIVEQLDEILKKQDIRNALQDDVWMLRDGHYV--- 211 +G I ++ PEL + +H+ +++E++++ K Q N L+ + G+Y+ Sbjct 420 EGGIFAAGYLPELDALHELTDHSA-QLLEKMEQEEKAQTGLNTLKIGFNRVH-GYYIDIP 477 Query 212 ------LPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRIL 265 P R+ ++ R V++S T+ + +L AQ++ E++ Sbjct 478 RSQAANAPAHWIRRQTLKNSERYVTESLKTL----------EERLLNAQDEALALEKQAY 527 Query 266 RELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAK 325 EL +D+ + L + D + + A H +P+F ++ + + Sbjct 528 TELLITLDKQRDDLYRLATALAESDVLTCFARLAKEHHYCRPQFSNQIEIQ----ITAGR 583 Query 326 HPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGL 384 HP+ L + IANDL L K Q + +L+GPN GGK+ M+ +I ++A AG Sbjct 584 HPVVEQLSAQPFIANDLVLHQKRQ------LLILTGPNMGGKSTYMRQTALIVILALAGS 637 Query 385 FVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVG 444 +V +A I IF +G + STF + + I A+E SL+++DE G Sbjct 638 YVPAKEARIGRINRIFTRIGASDDLAGGRSTFMVEMTETANILNNADEHSLVIMDEIGRG 697 Query 445 TDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFN---GSMEFEPHKLL 500 T G+++A + ++ K +A + TH+ L L + N + E + H + Sbjct 698 TSTFDGLSLAWAVADHLLQKNRALTLFATHYFELTALVERHQHGANIHLSAAEDQEHIVF 757 Query 501 PTYKLLNGIPGQSYAIELAERMGLNNNIIQKA 532 Y + G +SY + +A+ G+ +I A Sbjct 758 -LYHIEEGATSKSYGLHVAKLAGVPQAVIHNA 788 >RecName: Full=DNA mismatch repair protein MutS [Shewanella loihica PV-4] Sequence ID: A3QC86.1 Length: 855 Range 1: 587 to 794 Score:85.9 bits(211), Expect:9e-16, Method:Compositional matrix adjust., Identities:59/214(28%), Positives:99/214(46%), Gaps:10/214(4%) Query 324 AKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKA 382 +HP+ + IAN + L P + + +++GPN GGK+ M+ V +I LMA Sbjct 587 GRHPVVERVSQTPFIANPVSLNPARR------MLIVTGPNMGGKSTYMRQVALITLMAHI 640 Query 383 GLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGF 442 G FV KA I + IF +G + STF + + I A SL+L+DE Sbjct 641 GSFVPAQKAAIGPVDRIFTRIGAADDLASGRSTFMVEMTETANILHNATPESLVLMDEIG 700 Query 443 VGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KL 499 GT G+++A S E+ + K+ + TH+ L L D N ++ H + Sbjct 701 RGTSTYDGLSLAWSAAEHLAQNLKSMTLFATHYFELTQLPDQMENVANVHLDAIEHDDTI 760 Query 500 LPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 + + G +SY +++A G+ ++Q A+ Sbjct 761 AFMHAVQEGAASKSYGLQVAALAGVPAKVVQAAK 794 >RecName: Full=DNA mismatch repair protein MutS [Rhizorhabdus wittichii RW1] Sequence ID: A5VA00.1 Length: 904 Range 1: 616 to 831 Score:85.9 bits(211), Expect:9e-16, Method:Compositional matrix adjust., Identities:61/223(27%), Positives:111/223(49%), Gaps:15/223(6%) Query 319 FSLINAKHPLF----LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVG 374 F +I +HP+ + + +AND L+ + + +W+++GPN GGK+ ++ Sbjct 616 FDVIGGRHPVVEAAVAAQGARFVANDCRLSDQER------LWLVTGPNMGGKSTFLRQNA 669 Query 375 IIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELS 434 IA++A+AG V A + + +F +G N STF + + I QA E S Sbjct 670 AIAILAQAGSPVPATSARLGIVDRLFSRVGASDNLARGRSTFMVEMVETAAILAQATERS 729 Query 435 LILLDEGFVGTDPAIGVAMARSTLEYF-SVKKATVIITTHFSNLKTLA---DNDSRFFNG 490 ++LDE GT G+A+A + +E + + + TH+ L LA D S Sbjct 730 FVILDEVGRGTSTYDGLAIAWAVVEAVHDINRCRCLFATHYHELTRLAERLDALSLHHVR 789 Query 491 SMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 + E++ +L+ ++L +G +SY I +A+ GL+ ++ +AR Sbjct 790 AREWK-GELVLLHELADGPADRSYGIAVAKLAGLSPPVLARAR 831 >RecName: Full=DNA mismatch repair protein MutS [Shewanella sp. ANA-3] Sequence ID: A0KU91.1 Length: 861 Range 1: 615 to 794 Score:85.9 bits(211), Expect:9e-16, Method:Compositional matrix adjust., Identities:52/180(29%), Positives:90/180(50%), Gaps:3/180(1%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ V +I LMA G FV D+A I + IF +G + STF Sbjct 615 IVTGPNMGGKSTYMRQVALITLMAHIGCFVPADRAIIGPIDRIFTRIGASDDLASGRSTF 674 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFS 475 + + I A SL+L+DE GT G+++A S EY + + A + TH+ Sbjct 675 MVEMTETANILHNATAQSLVLMDEIGRGTSTYDGLSLAWSAAEYLAQQVGAMTLFATHYF 734 Query 476 NLKTLADNDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 L L + + +N ++ H+ + + + G +SY +++A G+ +I+ A+ Sbjct 735 ELTQLPELMAGVYNVHLDAIEHEDTIAFMHAVQEGAASKSYGLQVAALAGVPARVIKAAK 794 >RecName: Full=DNA mismatch repair protein MutS [Shewanella oneidensis MR-1] Sequence ID: Q8EBR9.1 Length: 856 Range 1: 615 to 794 Score:85.9 bits(211), Expect:1e-15, Method:Compositional matrix adjust., Identities:52/180(29%), Positives:90/180(50%), Gaps:3/180(1%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ V +I LMA G FV ++A I + IF +G + STF Sbjct 615 IVTGPNMGGKSTYMRQVALITLMAHIGCFVPAERATIGPIDRIFTRIGASDDLASGRSTF 674 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFS 475 + + I A SL+L+DE GT G+++A S EY + + A + TH+ Sbjct 675 MVEMTETANILHNATAQSLVLMDEIGRGTSTYDGLSLAWSAAEYLAQQVGAMTLFATHYF 734 Query 476 NLKTLADNDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 L L + S +N ++ H+ + + + G +SY +++A G+ +I+ A+ Sbjct 735 ELTQLPELMSGVYNVHLDAIEHEDTIAFMHAVQEGAASKSYGLQVAALAGVPARVIKAAK 794 >RecName: Full=DNA mismatch repair protein MutS [Shewanella sp. MR-4] Sequence ID: Q0HL63.1 Length: 861 Range 1: 615 to 794 Score:85.9 bits(211), Expect:1e-15, Method:Compositional matrix adjust., Identities:52/180(29%), Positives:90/180(50%), Gaps:3/180(1%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ V +I LMA G FV D+A I + IF +G + STF Sbjct 615 IVTGPNMGGKSTYMRQVALITLMAHIGCFVPADRAIIGPIDRIFTRIGASDDLASGRSTF 674 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFS 475 + + I A SL+L+DE GT G+++A S EY + + A + TH+ Sbjct 675 MVEMTETANILHNATAQSLVLMDEIGRGTSTYDGLSLAWSAAEYLAQQVGAMTLFATHYF 734 Query 476 NLKTLADNDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 L L + + +N ++ H+ + + + G +SY +++A G+ +I+ A+ Sbjct 735 ELTQLPELMAGVYNVHLDAIEHEDTIAFMHAVQEGAASKSYGLQVAALAGVPARVIKAAK 794 >RecName: Full=DNA mismatch repair protein MutS [Shewanella pealeana ATCC 700345] Sequence ID: A8H1T4.1 Length: 859 Range 1: 615 to 794 Score:85.5 bits(210), Expect:1e-15, Method:Compositional matrix adjust., Identities:52/180(29%), Positives:90/180(50%), Gaps:3/180(1%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ V +I LMA G +V ++A I + IF +G + STF Sbjct 615 IVTGPNMGGKSTYMRQVALITLMAHIGCYVPAEQAVIGPVDRIFTRIGASDDLASGRSTF 674 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFS 475 + + I A SL+L+DE GT G+++A S EY + + +A + TH+ Sbjct 675 MVEMTETANILHNATPNSLVLMDEIGRGTSTYDGLSLAWSAAEYLAKQLQAMTLFATHYF 734 Query 476 NLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 L L + S N ++ H ++ + + G +SY +++A G+ N +I A+ Sbjct 735 ELTQLPEQLSNVENVHLDAVEHGDSIVFMHAVQEGAASRSYGLQVAALAGVPNCVISAAK 794 >RecName: Full=DNA mismatch repair protein MutS [Alcanivorax borkumensis SK2] Sequence ID: Q0VNJ1.1 Length: 859 Range 1: 498 to 787 Score:85.5 bits(210), Expect:1e-15, Method:Compositional matrix adjust., Identities:65/303(21%), Positives:143/303(47%), Gaps:20/303(6%) Query 237 FIEPQALAMQQAQLEKAQNDVEVEE---QRILRELSKDCYLVHEDILSSSEILTQFDNII 293 FI P+ + L + + +E+ + +L +++ D + + S+ + + D + Sbjct 498 FITPELKEFEDKALSASSKALALEKRLYEALLEKVAADLHALQR----SAAAVAELDVLA 553 Query 294 ARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETS 352 + + A ++ + P+ + D +++ +HP+ + + + N LHL + + Sbjct 554 SLAERAEALNWVLPQLV---DDEAIIEIVDGRHPVVEQVLDDAFVPNSLHL------DNA 604 Query 353 PYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREED 412 + +++GPN GGK+ M+ +IAL+A G V A I + IF +G + Sbjct 605 RRMVIITGPNMGGKSTYMRQTALIALLAHLGSCVPAASARIGSLDRIFTRIGSSDDLAGG 664 Query 413 LSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIIT 471 STF +++ I A SL+L+DE GT G+++A + E+ + K+ + Sbjct 665 RSTFMVEMSETANILNNATAQSLVLMDEIGRGTSTFDGLSLAWAAAEHLARNLKSFTLFA 724 Query 472 THFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNII 529 TH+ L L + +N + H +++ +++ G +SY +++A+ G+ +++I Sbjct 725 THYFELTQLPEQLPGIYNAHLTASEHDNRIVFLHRVQEGPASRSYGLQVAQLAGVPSSVI 784 Query 530 QKA 532 +A Sbjct 785 HRA 787 >RecName: Full=DNA mismatch repair protein MutS [Shewanella baltica OS155] Sequence ID: A3D786.1 Length: 856 Range 1: 615 to 794 Score:85.5 bits(210), Expect:1e-15, Method:Compositional matrix adjust., Identities:52/180(29%), Positives:89/180(49%), Gaps:3/180(1%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ V +I LMA G FV +A I + IF +G + STF Sbjct 615 IVTGPNMGGKSTYMRQVALITLMAHIGCFVPAGRALIGPIDRIFTRIGASDDLASGRSTF 674 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFS 475 + + I A SL+L+DE GT G+++A S EY + + A + TH+ Sbjct 675 MVEMTETANILHNATASSLVLMDEIGRGTSTYDGLSLAWSAAEYLAQQVGAMTLFATHYF 734 Query 476 NLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 L L + + +N ++ H + + + G +SY +++A G+ N +I+ A+ Sbjct 735 ELTQLPELMAGVYNVHLDAIEHDDTIAFMHTVQEGAASKSYGLQVAALAGVPNKVIKAAK 794 >RecName: Full=DNA mismatch repair protein MutS [Alkalilimnicola ehrlichii MLHE-1] Sequence ID: Q0A8K3.1 Length: 878 Range 1: 476 to 794 Score:85.1 bits(209), Expect:2e-15, Method:Compositional matrix adjust., Identities:81/333(24%), Positives:148/333(44%), Gaps:21/333(6%) Query 208 GHYVLPIRADRKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQL---EKAQNDVEVEEQRI 264 G+Y+ RA + R + G +I P+ A + L EKA +V +++ Sbjct 476 GYYIEVTRAQADAVPAEYVRRQTLKGVERYILPELKAFEDKVLSAREKALAREKVLYEQL 535 Query 265 LRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINA 324 L L+ D + + ++ L + D + A + A + +PE RD + Sbjct 536 LASLASDLAPLQD----TAAALAELDTLAAFAERAQALDYSRPEL---RD-GAGLRIEAG 587 Query 325 KHPLFLLE-NKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAG 383 +HP+ + + NDL L + + + +++GPN GGK+ M+ V +I LMA G Sbjct 588 RHPVVEYSLDGPFVPNDLTLDDRRR------MLIITGPNMGGKSTYMRQVALITLMAHIG 641 Query 384 LFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFV 443 FV A + + IF +G + STF + + I A SL+L+DE Sbjct 642 SFVPARAASLGPVDRIFTRIGASDDLAGGRSTFMVEMTETANILHNATAQSLVLMDEIGR 701 Query 444 GTDPAIGVAMARSTLEYFSV-KKATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLL 500 GT G+A+A +T E + ++A + TH+ + L + N ++ H +++ Sbjct 702 GTSTFDGLALAWATAERLARDQRAYTLFATHYFEMTALPEQCPGASNVHLDAVEHGERIV 761 Query 501 PTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 + + G QSY +++A G+ +++ AR Sbjct 762 FLHAVKPGPASQSYGLQVAALAGVPGPVLEAAR 794 >RecName: Full=DNA mismatch repair protein MutS [Syntrophomonas wolfei subsp. wolfei str. Goettingen G311] Sequence ID: Q0AYB5.1 Length: 859 Range 1: 574 to 797 Score:84.7 bits(208), Expect:2e-15, Method:Compositional matrix adjust., Identities:62/233(27%), Positives:112/233(48%), Gaps:14/233(6%) Query 305 IKPEFLKPRDLNPRFSLINAKHPLF--LLENKKCIANDLHLAPKSQGETSPYVWVLSGPN 362 I+PE D + + + +HP+ L + + NDL L +++GPN Sbjct 574 IRPEI----DNSGKIRIRAGRHPVVEKALREARFVPNDLQL-----DRDKARFAIITGPN 624 Query 363 AGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQ 422 GGK+ M+ ++ LMA+ G F+ ++A I + IF +G + STF + + Sbjct 625 MGGKSTFMRQAALLVLMAQMGSFIPAEEARIGLVDKIFTRVGASDDLAAGQSTFMVEMIE 684 Query 423 IKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEY-FSVKKATVIITTHFSNLKTLA 481 + I A++ SL++LDE GT G+++A++ EY ++ V+ TH+ L LA Sbjct 685 VANILNNASDNSLVILDEIGRGTSTYDGLSIAQAVSEYLLENSRSKVLFATHYHQLTRLA 744 Query 482 DNDSRFFNGSMEFEP--HKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKA 532 + N S+ + + ++ K+L G +SY + +A GL +I +A Sbjct 745 EKLPGIINLSVSVKETGNTVVFLKKVLPGKADKSYGLHVARLAGLPEKLIIRA 797 >RecName: Full=DNA mismatch repair protein MutS [Halorhodospira halophila SL1] Sequence ID: A1WXK9.1 Length: 868 Range 1: 575 to 797 Score:84.7 bits(208), Expect:2e-15, Method:Compositional matrix adjust., Identities:59/233(25%), Positives:109/233(46%), Gaps:14/233(6%) Query 305 IKPEFLKPRDLNPRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNA 363 ++PE P + +HP+ + + ND+ L + + + +++GPN Sbjct 575 VQPELAD----TPGVRIEGGRHPVVEQALDAPFVPNDVRLDNRRR------MLLITGPNM 624 Query 364 GGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQI 423 GGK+ M+ +IAL+A AG FV +A + + IF +G + STF + + Sbjct 625 GGKSTYMRQTALIALLAYAGAFVPAQRAVLGPIDRIFTRIGAADDLASGRSTFMVEMTET 684 Query 424 KRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLAD 482 I A SL+L+DE GT G+A+A +T E + + +A + TH+ + L Sbjct 685 ANILHNATAESLVLMDEIGRGTSTFDGLALAWATAERLATRIRAFTLFATHYFEMTALEQ 744 Query 483 NDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 N +E H +++ + + +G QSY +++A G+ +++ AR Sbjct 745 IHPGVVNVHLEAAEHGERIVFLHAVRDGPANQSYGLQVAALAGVPQEVLKAAR 797 >RecName: Full=DNA mismatch repair protein Msh2; AltName: Full=MutS protein homolog 2 [Dictyostelium discoideum] Sequence ID: Q553L4.1 Length: 937 Range 1: 672 to 883 Score:84.7 bits(208), Expect:2e-15, Method:Compositional matrix adjust., Identities:62/217(29%), Positives:105/217(48%), Gaps:9/217(4%) Query 321 LINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALM 379 +I +HP + +N IAND+ L ++G++ +++GPN GGK+ ++ VG+I LM Sbjct 672 IIGGRHPCVEIQDNVNFIANDIDL---TRGQSQ--FQIITGPNMGGKSTFIRQVGLIVLM 726 Query 380 AKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLD 439 A+ G FV KA I + I +G ++ +STF + + I + A + SLI++D Sbjct 727 AQIGCFVPAQKATIAVVDCILSRVGAGDSQLRGVSTFMAEMLETSYILKVATKNSLIIID 786 Query 440 EGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLAD--NDSRFFNGSMEFEP 496 E GT G +A EY + + THF L L+D + + S + Sbjct 787 ELGRGTSTYDGFGLAWGIAEYICNQIGGFCLFATHFHELTILSDLLPMVKNLHVSASTQN 846 Query 497 HKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 + YK+ G QS+ I +A + +I+ A+ Sbjct 847 NTFTLLYKVEQGPCDQSFGIHVAILANFPSQVIENAK 883 >RecName: Full=DNA mismatch repair protein MutS [Nitrosomonas eutropha C91] Sequence ID: Q0AEI7.1 Length: 880 Range 1: 567 to 810 Score:84.3 bits(207), Expect:3e-15, Method:Compositional matrix adjust., Identities:64/251(25%), Positives:117/251(46%), Gaps:11/251(4%) Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHL-A 344 + + D + A + A + KP F +P + +HP+ + ++ IAND+ L A Sbjct 567 VAELDVLCAFAERADLFGYTKPVFTD----DPALDIEAGRHPVVENQIEQYIANDIQLGA 622 Query 345 PKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELG 404 +G + +++GPN GGK+ M+ +I L+A G FV A I + IF +G Sbjct 623 VTREGRQ---MLIITGPNMGGKSTYMRQTALIILLAHCGSFVPAGSARIGPIDQIFTRIG 679 Query 405 DRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK 464 + STF + + I A SL+L+DE GT G+A+A + + + Sbjct 680 AADDLAGGRSTFMVEMTEAASILRNATAQSLVLVDEIGRGTSTFDGLALAFAIARHLLTQ 739 Query 465 -KATVIITTHFSNLKTLADNDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIELAER 521 ++ + TH+ L LA+ + N + HK ++ +++ G +SY + +A Sbjct 740 NQSYTLFATHYFELTRLAEEFPQAINVHVTAVEHKRRIVFLHRIEEGSASRSYGLHVAAL 799 Query 522 MGLNNNIIQKA 532 G+ + +I+ A Sbjct 800 AGVPDKVIRNA 810 >RecName: Full=DNA mismatch repair protein MutS [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Sequence ID: Q89AD3.1 Length: 800 Range 1: 582 to 792 Score:84.3 bits(207), Expect:3e-15, Method:Compositional matrix adjust., Identities:61/219(28%), Positives:107/219(48%), Gaps:14/219(6%) Query 321 LINAKHPLFLLEN---KKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIA 377 L +++HP+ +EN + N ++L+ S + +++GPN GGK+ M+ + +I Sbjct 582 LTDSRHPV--VENLLKTPFVKNSINLSKSSN------MLIITGPNMGGKSTYMRQIALIV 633 Query 378 LMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLIL 437 +MA G FV A I + IF +G N STF + ++ I + SL+L Sbjct 634 IMAYIGSFVPAKYARIGLCDKIFTRIGSADNLAYGESTFMMEMIEMSSILRNSTSNSLVL 693 Query 438 LDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEP 496 +DE GT G+++A + +EY + K A + +TH+ L L + S N + Sbjct 694 IDELGRGTSMHDGLSLAWACIEYLAGKINAMTLFSTHYFELTKLKNYYSNIRNMYFDVLE 753 Query 497 H--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 H +++ TY + NG +SY + +A L I+ A+ Sbjct 754 HNNEIVFTYVIKNGFINKSYGLVVAALAKLPKCILLSAK 792 >RecName: Full=DNA mismatch repair protein MutS [Pasteurella multocida subsp. multocida str. Pm70] Sequence ID: P57972.1 Length: 860 Range 1: 544 to 789 Score:84.0 bits(206), Expect:3e-15, Method:Compositional matrix adjust., Identities:64/256(25%), Positives:120/256(46%), Gaps:14/256(5%) Query 282 SSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF-LLENKKCIAND 340 +S L + D + + A ++ + P+F D+ +HP+ + N IAN Sbjct 544 ASLTLAELDVLTNLAERAETLNYVAPQF--SDDIGVHIQ--QGRHPVVEQVLNAPFIANP 599 Query 341 LHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIF 400 + L P+ ++ +++GPN GGK+ M+ +I LMA G FV + A I + IF Sbjct 600 VELHPQR------HLLIITGPNMGGKSTYMRQTALITLMAYMGSFVPAESAVIGPIDRIF 653 Query 401 VELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEY 460 +G + STF + ++ I QA SL+L+DE GT G+++A + E+ Sbjct 654 TRIGASDDLASGRSTFMVEMTEMANILHQATANSLVLIDEIGRGTSTYDGLSLAWACAEW 713 Query 461 FSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIE 517 + K ++ + TH+ L L + + N ++ H + + + G +SY + Sbjct 714 LAKKLRSLTLFATHYFELTVLPEQLAGSANVHLDAIEHNDTIAFMHAVQEGAASKSYGLA 773 Query 518 LAERMGLNNNIIQKAR 533 +A G+ ++I+ A+ Sbjct 774 VAALAGVPQSVIKLAK 789 >RecName: Full=DNA mismatch repair protein MutS [Nitrosococcus oceani ATCC 19707] Sequence ID: Q3JCL5.1 Length: 863 Range 1: 615 to 796 Score:84.0 bits(206), Expect:3e-15, Method:Compositional matrix adjust., Identities:53/182(29%), Positives:90/182(49%), Gaps:3/182(1%) Query 355 VWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLS 414 + +++GPN GGK+ M+ +I L+A G FV +A I + IF +G + S Sbjct 615 MLIITGPNMGGKSTYMRQTALIVLLAHIGSFVPARRAVIGPIDRIFTRIGAADDLAGGRS 674 Query 415 TFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTH 473 TF + + I A E SL+LLDE GT G+++A + + + + K ++ + TH Sbjct 675 TFMVEMTETANILHNATEHSLVLLDEVGRGTSTFDGLSLAWAVVSHLANKVRSLTLFATH 734 Query 474 FSNLKTLADNDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQK 531 + L TL + N + HK ++ + + G QSY +++A G+ II + Sbjct 735 YFELTTLPECLPGVVNLHLTATEHKEHIVFLHAVKEGPASQSYGLQVAALAGVPQEIIAQ 794 Query 532 AR 533 AR Sbjct 795 AR 796 >RecName: Full=DNA mismatch repair protein MutS [Sodalis glossinidius str. 'morsitans'] Sequence ID: Q2NVL9.1 Length: 854 Range 1: 582 to 790 Score:83.6 bits(205), Expect:5e-15, Method:Compositional matrix adjust., Identities:58/215(27%), Positives:103/215(47%), Gaps:10/215(4%) Query 323 NAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAK 381 +HP+ + ++ IAN L L+ + + +++GPN GGK+ M+ +I L+A Sbjct 582 GGRHPVVEHVLSEPFIANPLTLSDARR------MLIITGPNMGGKSTYMRQTALIVLLAY 635 Query 382 AGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEG 441 G FV D+A I + IF +G + STF + + I A SL+L+DE Sbjct 636 IGSFVPADEATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATHQSLVLMDEI 695 Query 442 FVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--K 498 GT G+++A ++ E + + KA + TH+ L TL + N ++ H Sbjct 696 GRGTSTYDGLSLAWASAESLAGRIKAMTLFATHYFELTTLPEKMEGVVNVHLDAVEHGDT 755 Query 499 LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 + + + G +SY + +A G+ +I++AR Sbjct 756 IAFMHSVQEGAASKSYGLSVAALAGVPREVIKRAR 790 >RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS protein homolog 3 [Kluyveromyces lactis NRRL Y-1140] Sequence ID: Q6CSR1.1 Length: 1029 Range 1: 736 to 983 Score:83.6 bits(205), Expect:5e-15, Method:Compositional matrix adjust., Identities:64/259(25%), Positives:123/259(47%), Gaps:23/259(8%) Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAP 345 L +D I++ + ++ +KP K +L+ + + N ++P+ + + ND+ ++ Sbjct 736 LATYDCILSLAATSSNVNYVKP---KLTELHQKVKVKNGRNPIIESLDVNYVPNDVLMSS 792 Query 346 KSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGD 405 S + +++GPN GGK+ ++ V ++ +M + G ++ D AE+ + IF +G Sbjct 793 NSGK-----INIITGPNMGGKSSYIRQVALLVIMTQIGCYIPADSAEMSICDRIFTRIGS 847 Query 406 RQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSV-- 463 + STF ++++ I + SL+LLDE GT G++++ + L YF Sbjct 848 HDDLLNAKSTFQVEMSEVLHILNSSTPRSLLLLDEVGRGTGTHDGLSISFAILNYFVYLA 907 Query 464 -KKATVIITTHFSNLKTLADNDSRFF-NGSMEF-EPHK-------LLPTYKLLNGIPGQS 513 V+ TH+S L DS+ N M + E H+ ++ YKL+ G S Sbjct 908 DNCPLVLFITHYS---ALCQIDSKLIANYHMSYIEKHQPGEKWTNVIFLYKLVLGQAHNS 964 Query 514 YAIELAERMGLNNNIIQKA 532 Y +A+ + II +A Sbjct 965 YGFNVAKLSNIPTEIINRA 983 >RecName: Full=DNA mismatch repair protein MutS [Vibrio cholerae O395] Sequence ID: A5F9C4.1 Length: 862 >RecName: Full=DNA mismatch repair protein MutS [Vibrio cholerae M66-2] Sequence ID: C3LS25.1 Length: 862 >RecName: Full=DNA mismatch repair protein MutS [Vibrio cholerae O1 biovar El Tor str. N16961] Sequence ID: Q9KUI6.1 Length: 862 Range 1: 589 to 798 Score:83.6 bits(205), Expect:5e-15, Method:Compositional matrix adjust., Identities:57/216(26%), Positives:102/216(47%), Gaps:10/216(4%) Query 323 NAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAK 381 +HP+ + N+ IAN + L P+ + + +++GPN GGK+ M+ +IALMA Sbjct 589 GGRHPVVERVMNEPFIANPIELNPQRR------MLIITGPNMGGKSTYMRQTALIALMAH 642 Query 382 AGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEG 441 G +V + A I + IF +G + STF + + I A SL+L+DE Sbjct 643 IGSYVPAESASIGPLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATRNSLVLMDEI 702 Query 442 FVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--K 498 GT G+++A ++ E+ + + A + TH+ L L + N ++ H Sbjct 703 GRGTSTYDGLSLAWASAEWLAKEIGAMTLFATHYFELTELPNVLPHLANVHLDAVEHGDG 762 Query 499 LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKART 534 + + + G +SY + +A G+ +I+ AR Sbjct 763 IAFMHAVQEGAASKSYGLAVAGLAGVPKPVIKNARA 798 >RecName: Full=DNA mismatch repair protein MSH7; Short=AtMSH7; AltName: Full=MutS protein homolog 7 [Arabidopsis thaliana] Sequence ID: Q9SMV7.1 Length: 1109 Range 1: 816 to 1038 Score:83.6 bits(205), Expect:5e-15, Method:Compositional matrix adjust., Identities:57/223(26%), Positives:104/223(46%), Gaps:16/223(7%) Query 326 HPLFLLENKKC-IANDLHL--APKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKA 382 HP + + + + ND+ L A +S G P +L+GPN GGK+ ++ + + A+ Sbjct 816 HPFAVAADGQLPVPNDILLGEARRSSGSIHPRSLLLTGPNMGGKSTLLRATCLAVIFAQL 875 Query 383 GLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGF 442 G +V C+ EI + IF LG STF + + + A + SL++LDE Sbjct 876 GCYVPCESCEISLVDTIFTRLGASDRIMTGESTFLVECTETASVLQNATQDSLVILDELG 935 Query 443 VGTDPAIGVAMARSTLEYFSVK-KATVIITTHF--------SNLKTLADNDSRFFNGSME 493 GT G A+A S + K + ++ TH+ S+ + + + + F + Sbjct 936 RGTSTFDGYAIAYSVFRHLVEKVQCRMLFATHYHPLTKEFASHPRVTSKHMACAFKSRSD 995 Query 494 FEP----HKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKA 532 ++P L+ Y+L G +SY +++A G+ N +++ A Sbjct 996 YQPRGCDQDLVFLYRLTEGACPESYGLQVALMAGIPNQVVETA 1038 >RecName: Full=DNA mismatch repair protein MutS [Hydrogenovibrio crunogenus XCL-2] Sequence ID: Q31F87.1 Length: 871 Range 1: 614 to 801 Score:83.2 bits(204), Expect:6e-15, Method:Compositional matrix adjust., Identities:55/192(29%), Positives:94/192(48%), Gaps:7/192(3%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ +IA+MA G FV + A + + IF +G + STF Sbjct 614 IITGPNMGGKSTFMRQTALIAIMAYMGSFVPAESATLGPIDRIFTRIGASDDLTSGRSTF 673 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFS 475 + + I A+ SLIL+DE GT G+A+A + E + + + TH+ Sbjct 674 MVEMTETANILHHASPESLILMDEVGRGTSTFDGLALAWAIAEQMAQSIQGYCLFATHYF 733 Query 476 NLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 L TL + + N + H K++ +++ G QSY +++A G+ +I KA+ Sbjct 734 ELTTLVEQFNNTVNIHLSAIEHQDKIVFMHQVEEGPASQSYGLQVAALAGVPTAVIDKAK 793 Query 534 TYYGSESERMEN 545 + R+EN Sbjct 794 KHL----HRLEN 801 >RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS protein homolog 3 [Vanderwaltozyma polyspora DSM 70294] Sequence ID: A7TTQ1.1 Length: 1023 Range 1: 655 to 972 Score:83.2 bits(204), Expect:6e-15, Method:Compositional matrix adjust., Identities:78/328(24%), Positives:149/328(45%), Gaps:23/328(7%) Query 218 RKSGIEGIPRGVSQSGSTVFIEPQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVHE 277 R + +G+P T I + +EK Q ++ Q +E + + Sbjct 655 RNTQTKGLPSDWIVVNRTKMISRYHTPTSRKLIEKLQYQKDILYQETQKEYFQFVKRIKN 714 Query 278 DILSSSEILTQ---FDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENK 334 D + ++I+ +D I+A + ++ ++P D + NA++P+ + Sbjct 715 DYFALNKIINHIATYDCILALASTSQNMNYVRPVL---TDESQFIDAKNARNPIIESLDI 771 Query 335 KCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQ 394 + ND++L+ S G+ +++GPN GGK+ ++ V ++ ++A+ G +V D + Sbjct 772 NYVPNDVNLS-HSAGK----FLIITGPNMGGKSSYIRQVALLVILAQVGSYVPADFMKTS 826 Query 395 DYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMA 454 ++ I +G N + STF L +I+ I + E SL+LLDE GT G A++ Sbjct 827 IFDKILTRIGAYDNLLKGQSTFKVELLEIQNIIKNKTENSLLLLDEVGRGTSTEDGKAIS 886 Query 455 RSTLEYFSVKKAT--VIITTHFSNLKTLADNDSRFFNGSMEFEPHK--------LLPTYK 504 S ++YF V+ TTH+ L ++ N + M+F K ++ YK Sbjct 887 YSIVDYFINLPVCPLVLFTTHYPFLGSI--NSKILKSYYMDFVEQKKEGEDWPSIVFLYK 944 Query 505 LLNGIPGQSYAIELAERMGLNNNIIQKA 532 L +GI S+ + +A ++ +II A Sbjct 945 LRSGITDSSFGLNVARLAQIDKDIINHA 972 >RecName: Full=DNA mismatch repair protein MutS [Shewanella halifaxensis HAW-EB4] Sequence ID: B0TK13.1 Length: 859 Range 1: 615 to 794 Score:83.2 bits(204), Expect:7e-15, Method:Compositional matrix adjust., Identities:52/180(29%), Positives:88/180(48%), Gaps:3/180(1%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ V +I LMA G +V + A I + IF +G + STF Sbjct 615 IVTGPNMGGKSTYMRQVALITLMAHIGCYVPAEHAVIGPVDRIFTRIGASDDLASGRSTF 674 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFS 475 + + I A SL+L+DE GT G+++A S EY + +A + TH+ Sbjct 675 MVEMTETANILHNATPNSLVLMDEIGRGTSTYDGLSLAWSAAEYLAKHLQAMTLFATHYF 734 Query 476 NLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 L L + S N ++ H ++ + + G +SY +++A G+ N +I A+ Sbjct 735 ELTQLPELLSNVENVHLDAVEHGDSIVFMHAVQEGAASRSYGLQVAALAGVPNCVISAAK 794 >RecName: Full=DNA mismatch repair protein MutS [Shewanella sediminis HAW-EB3] Sequence ID: A8FST7.1 Length: 859 Range 1: 586 to 794 Score:82.8 bits(203), Expect:7e-15, Method:Compositional matrix adjust., Identities:58/215(27%), Positives:99/215(46%), Gaps:10/215(4%) Query 323 NAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAK 381 +HP+ + IAN + L P + + +++GPN GGK+ M+ V +I LM Sbjct 586 GGRHPVVEQVSQTPFIANPVTLNPARK------MLIVTGPNMGGKSTYMRQVALITLMTH 639 Query 382 AGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEG 441 G +V A I + IF +G + STF + + I A SL+L+DE Sbjct 640 IGCYVPAQSAVIGPVDRIFTRIGAADDLASGRSTFMVEMTETANILHNATTESLVLMDEI 699 Query 442 FVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--K 498 GT G+++A S EY + K +A + TH+ L L + S N ++ H Sbjct 700 GRGTSTYDGLSLAWSAAEYLAQKIEAMTLFATHYFELTQLPELISNVENVHLDAIEHGDT 759 Query 499 LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 ++ + + G +SY +++A G+ +I A+ Sbjct 760 IVFMHAVQEGAASKSYGLQVAALAGVPGKVITAAK 794 >RecName: Full=DNA mismatch repair protein MutS [Shewanella amazonensis SB2B] Sequence ID: A1S4E6.1 Length: 854 Range 1: 615 to 794 Score:82.8 bits(203), Expect:8e-15, Method:Compositional matrix adjust., Identities:53/180(29%), Positives:88/180(48%), Gaps:3/180(1%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ V +I LMA G FV ++A I + IF +G + STF Sbjct 615 IVTGPNMGGKSTYMRQVALITLMAHIGSFVPAERALIGPVDRIFTRIGASDDLASGRSTF 674 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFS 475 + + I A SL+L+DE GT G+++A S EY + K A + TH+ Sbjct 675 MVEMTETANILHNATANSLVLMDEIGRGTSTYDGMSLAWSAAEYLAQKLGAMTLFATHYF 734 Query 476 NLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 L L + N ++ H + + + G +SY +++A G+ N+I+ A+ Sbjct 735 ELTQLPEMLPGVHNVHLDAIEHDDTIAFMHAVQEGAASKSYGLQVAALAGVPANVIKAAK 794 >RecName: Full=DNA mismatch repair protein MutS [Burkholderia pseudomallei 1106a] Sequence ID: A3NWZ4.2 Length: 891 Range 1: 570 to 812 Score:82.8 bits(203), Expect:9e-15, Method:Compositional matrix adjust., Identities:64/253(25%), Positives:114/253(45%), Gaps:13/253(5%) Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAP 345 L + D + A + A + + PEF + + +HP+ + ++ IAND L P Sbjct 570 LAELDLLAAFAERARTLDWVAPEFTDEIGIE----IDQGRHPVVEAQVEQFIANDCALNP 625 Query 346 KSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGD 405 + + + +++GPN GGK+ M+ +IALMA G +V A + IF +G Sbjct 626 ERK------LLLITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGA 679 Query 406 RQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEY-FSVK 464 + STF + + I A SL+L+DE GT G+A+A + + S Sbjct 680 ADDLAGGRSTFMVEMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHN 739 Query 465 KATVIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIELAERM 522 + + TH+ L L + N + H ++ + + G QSY +++A+ Sbjct 740 RCYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHGIVFLHAVEEGPANQSYGLQVAQLA 799 Query 523 GLNNNIIQKARTY 535 G+ +I+ AR + Sbjct 800 GVPAPVIRAARKH 812 >RecName: Full=DNA mismatch repair protein MutS [Burkholderia pseudomallei 668] Sequence ID: A3NB64.1 Length: 891 Range 1: 570 to 812 Score:82.4 bits(202), Expect:9e-15, Method:Compositional matrix adjust., Identities:64/253(25%), Positives:114/253(45%), Gaps:13/253(5%) Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAP 345 L + D + A + A + + PEF + + +HP+ + ++ IAND L P Sbjct 570 LAELDLLAAFAERARTLDWVAPEFTDEIGIE----IDQGRHPVVEAQVEQFIANDCALNP 625 Query 346 KSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGD 405 + + + +++GPN GGK+ M+ +IALMA G +V A + IF +G Sbjct 626 ERK------LLLITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGA 679 Query 406 RQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEY-FSVK 464 + STF + + I A SL+L+DE GT G+A+A + + S Sbjct 680 ADDLAGGRSTFMVEMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHN 739 Query 465 KATVIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIELAERM 522 + + TH+ L L + N + H ++ + + G QSY +++A+ Sbjct 740 RCYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHGIVFLHAVEEGPANQSYGLQVAQLA 799 Query 523 GLNNNIIQKARTY 535 G+ +I+ AR + Sbjct 800 GVPAPVIRAARKH 812 >RecName: Full=DNA mismatch repair protein MutS [Burkholderia mallei SAVP1] Sequence ID: A1V5I2.2 Length: 891 >RecName: Full=DNA mismatch repair protein MutS [Burkholderia mallei NCTC 10229] Sequence ID: A2SAW7.2 Length: 891 >RecName: Full=DNA mismatch repair protein MutS [Burkholderia mallei NCTC 10247] Sequence ID: A3ML57.2 Length: 891 >RecName: Full=DNA mismatch repair protein MutS [Burkholderia mallei ATCC 23344] Sequence ID: Q62J26.1 Length: 891 Range 1: 570 to 812 Score:82.4 bits(202), Expect:9e-15, Method:Compositional matrix adjust., Identities:64/253(25%), Positives:114/253(45%), Gaps:13/253(5%) Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAP 345 L + D + A + A + + PEF + + +HP+ + ++ IAND L P Sbjct 570 LAELDLLAAFAERARTLDWVAPEFTDEIGIE----IDQGRHPVVEAQVEQFIANDCALNP 625 Query 346 KSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGD 405 + + + +++GPN GGK+ M+ +IALMA G +V A + IF +G Sbjct 626 ERK------LLLITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGA 679 Query 406 RQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEY-FSVK 464 + STF + + I A SL+L+DE GT G+A+A + + S Sbjct 680 ADDLAGGRSTFMVEMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHN 739 Query 465 KATVIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIELAERM 522 + + TH+ L L + N + H ++ + + G QSY +++A+ Sbjct 740 RCYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHGIVFLHAVEEGPANQSYGLQVAQLA 799 Query 523 GLNNNIIQKARTY 535 G+ +I+ AR + Sbjct 800 GVPAPVIRAARKH 812 >RecName: Full=DNA mismatch repair protein MutS [Paraburkholderia phytofirmans PsJN] Sequence ID: B2SXQ9.1 Length: 894 Range 1: 603 to 810 Score:82.4 bits(202), Expect:1e-14, Method:Compositional matrix adjust., Identities:56/214(26%), Positives:100/214(46%), Gaps:9/214(4%) Query 325 KHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGL 384 +HP+ + ++ IAND L P+ + + +++GPN GGK+ M+ +IAL+A G Sbjct 603 RHPVVEAQVEQFIANDCSLTPERK------LLLITGPNMGGKSTFMRQTALIALLAYVGS 656 Query 385 FVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVG 444 +V +A + IF +G + STF + + I A SL+L+DE G Sbjct 657 YVPARRAAFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRG 716 Query 445 TDPAIGVAMARSTLEYFSVKKAT-VIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLP 501 T G+A+A + + + TH+ L L + N + H ++ Sbjct 717 TSTFDGLALAWAIARHLLAHNGCHTLFATHYFELTQLPAEFPQAANVHLSAVEHGHGIVF 776 Query 502 TYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY 535 + + G QSY +++A+ G+ N +I+ AR + Sbjct 777 LHAVSEGPANQSYGLQVAQLAGVPNAVIRAARKH 810 >RecName: Full=DNA mismatch repair protein MutS [Burkholderia pseudomallei K96243] Sequence ID: Q63SR9.1 Length: 890 Range 1: 570 to 812 Score:82.4 bits(202), Expect:1e-14, Method:Compositional matrix adjust., Identities:64/253(25%), Positives:114/253(45%), Gaps:13/253(5%) Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAP 345 L + D + A + A + + PEF + + +HP+ + ++ IAND L P Sbjct 570 LAELDLLAAFAERARTLDWVAPEFTDEIGIE----IDQGRHPVVEAQVEQFIANDCALNP 625 Query 346 KSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGD 405 + + + +++GPN GGK+ M+ +IALMA G +V A + IF +G Sbjct 626 ERK------LLLITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGA 679 Query 406 RQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEY-FSVK 464 + STF + + I A SL+L+DE GT G+A+A + + S Sbjct 680 ADDLAGGRSTFMVEMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHN 739 Query 465 KATVIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIELAERM 522 + + TH+ L L + N + H ++ + + G QSY +++A+ Sbjct 740 RCYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHGIVFLHAVEEGPANQSYGLQVAQLA 799 Query 523 GLNNNIIQKARTY 535 G+ +I+ AR + Sbjct 800 GVPAPVIRAARKH 812 >RecName: Full=DNA mismatch repair protein MutS [Paraburkholderia xenovorans LB400] Sequence ID: Q13X51.2 Length: 894 Range 1: 603 to 810 Score:82.4 bits(202), Expect:1e-14, Method:Compositional matrix adjust., Identities:56/214(26%), Positives:100/214(46%), Gaps:9/214(4%) Query 325 KHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGL 384 +HP+ + ++ IAND L P+ + + +++GPN GGK+ M+ +IAL+A G Sbjct 603 RHPVVEAQVEQFIANDCSLTPERK------LLLITGPNMGGKSTFMRQTALIALLAYVGS 656 Query 385 FVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVG 444 +V +A + IF +G + STF + + I A SL+L+DE G Sbjct 657 YVPARRAAFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRG 716 Query 445 TDPAIGVAMARSTLEYFSVKKAT-VIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLP 501 T G+A+A + + + TH+ L L + N + H ++ Sbjct 717 TSTFDGLALAWAIARHLLAHNGCHTLFATHYFELTQLPAEFPQAANVHLSAVEHGHGIVF 776 Query 502 TYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY 535 + + G QSY +++A+ G+ N +I+ AR + Sbjct 777 LHAVSEGPANQSYGLQVAQLAGVPNAVIRAARKH 810 >RecName: Full=DNA mismatch repair protein MutS [Francisella philomiragia subsp. philomiragia ATCC 25017] Sequence ID: B0TX99.1 Length: 848 Range 1: 607 to 785 Score:81.6 bits(200), Expect:2e-14, Method:Compositional matrix adjust., Identities:48/179(27%), Positives:90/179(50%), Gaps:2/179(1%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ V + +A G FV A+I D + I+ +G + STF Sbjct 607 IITGPNMGGKSTYMRQVAQLIFLAYIGSFVPASYADIGDIDTIYTRIGASDDISSGRSTF 666 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVKKATVIITTHFSN 476 + + I A + SL+++DE GT G+++A++ E F+ A + TH+ Sbjct 667 MVEMTETAYILNNATKKSLVIMDEIGRGTSTFDGLSLAKACAEKFAKIGAMTLFATHYFE 726 Query 477 LKTLADNDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 L L + N E + +K + +K + G +SY I++A+ G++ +++ A+ Sbjct 727 LTELVNQYPNTKNIHFEAKEYKDNIYFMHKAVAGAAKKSYGIQVAKLAGISKDVLDSAK 785 >RecName: Full=DNA mismatch repair protein MutS [Burkholderia pseudomallei 1710b] Sequence ID: Q3JQS6.2 Length: 890 Range 1: 570 to 812 Score:82.0 bits(201), Expect:2e-14, Method:Compositional matrix adjust., Identities:64/253(25%), Positives:114/253(45%), Gaps:13/253(5%) Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAP 345 L + D + A + A + + PEF + + +HP+ + ++ IAND L P Sbjct 570 LAELDLLAAFAERARTLDWVAPEFTDEIGIE----IDQGRHPVVEAQVEQFIANDCALNP 625 Query 346 KSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGD 405 + + + +++GPN GGK+ M+ +IALMA G +V A + IF +G Sbjct 626 ERK------LLLITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGA 679 Query 406 RQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEY-FSVK 464 + STF + + I A SL+L+DE GT G+A+A + + S Sbjct 680 ADDLAGGRSTFMVEMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHN 739 Query 465 KATVIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIELAERM 522 + + TH+ L L + N + H ++ + + G QSY +++A+ Sbjct 740 RCYTLFATHYFELTQLPVEFPQAANVHLSAVEHGHGIVFLHAVEEGPANQSYGLQVAQLA 799 Query 523 GLNNNIIQKARTY 535 G+ +I+ AR + Sbjct 800 GVPAPVIRAARKH 812 >RecName: Full=DNA mismatch repair protein MutS [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Sequence ID: A0KPG5.1 Length: 860 Range 1: 527 to 801 Score:81.6 bits(200), Expect:2e-14, Method:Compositional matrix adjust., Identities:76/287(26%), Positives:130/287(45%), Gaps:18/287(6%) Query 253 AQNDVEVEEQRILRELSKDCYLVH-EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLK 311 AQ E+R+ EL D L H D+ S+ L + D + + A + ++ Sbjct 527 AQAQALALEKRLYEEL-LDALLPHLGDLQESAAALAELDVLANLAERAETL-----DYRC 580 Query 312 PRDLNPRFSLINA-KHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVA 369 P ++ LI A +HP+ + IAN ++L + S + +++GPN GGK+ Sbjct 581 PTLIDEDQILIEAGRHPVVEQVMTDPFIANPINL------QRSRRMLIITGPNMGGKSTY 634 Query 370 MKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQ 429 M+ +I L+A G FV D A I + IF +G + STF + + I Sbjct 635 MRQTALIVLLAHIGAFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILNN 694 Query 430 ANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFF 488 A SL+L+DE GT G+++A + E + K A + TH+ L L + Sbjct 695 ATARSLVLMDEIGRGTSTYDGLSLAWACAEQLASKIGAYTLFATHYFELTRLPELMEGLA 754 Query 489 NGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 N ++ H + + + G +SY +++A G+ ++IQ+AR Sbjct 755 NVHLDAVEHGDTIAFMHAVQEGAASRSYGLQVAALAGVPKSVIQQAR 801 >RecName: Full=DNA mismatch repair protein MutS [Paraburkholderia phymatum STM815] Sequence ID: B2JIT0.1 Length: 892 Range 1: 605 to 812 Score:81.6 bits(200), Expect:2e-14, Method:Compositional matrix adjust., Identities:57/214(27%), Positives:99/214(46%), Gaps:9/214(4%) Query 325 KHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGL 384 +HP+ + ++ IAND L P+ + + +++GPN GGK+ M+ +IALMA G Sbjct 605 RHPVVEAQVEQFIANDCMLNPERK------LLLITGPNMGGKSTFMRQTALIALMAYVGS 658 Query 385 FVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVG 444 +V +A + IF +G + STF + + I A SL+L+DE G Sbjct 659 YVPARRASFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRG 718 Query 445 TDPAIGVAMARSTLEYFSVKKAT-VIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLP 501 T G+A+A + + + TH+ L L N + H ++ Sbjct 719 TSTFDGLALAWAIARHLLAHNGCHTLFATHYFELTQLPAEFPHAANVHLSAVEHGHGIVF 778 Query 502 TYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY 535 + + G QSY +++A+ G+ N +I+ AR + Sbjct 779 LHAVNEGPANQSYGLQVAQLAGVPNAVIRAARKH 812 >RecName: Full=DNA mismatch repair protein MutS [[Mannheimia] succiniciproducens MBEL55E] Sequence ID: Q65QA9.1 Length: 861 Range 1: 582 to 790 Score:81.3 bits(199), Expect:2e-14, Method:Compositional matrix adjust., Identities:56/215(26%), Positives:105/215(48%), Gaps:10/215(4%) Query 323 NAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAK 381 N +HP+ + + IAN + L + ++ +++GPN GGK+ M+ +I LMA Sbjct 582 NGRHPVVEQVLKEPFIANPVDLNQQR------HLLIITGPNMGGKSTYMRQTALITLMAY 635 Query 382 AGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEG 441 G FV + A I + IF +G + STF + ++ I QA SL+L+DE Sbjct 636 IGSFVPAESALIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQAGANSLVLIDEI 695 Query 442 FVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--K 498 GT G+++A + E+ + K ++ + TH+ L L + + N ++ H Sbjct 696 GRGTSTYDGLSLAWACAEWLAKKLRSLTLFATHYFELTVLPEQLAGTANVHLDALEHGDS 755 Query 499 LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 + + + +G +SY + +A G+ N+++ A+ Sbjct 756 IAFMHAVQDGAASKSYGLAVAALAGVPKNVVKLAK 790 >RecName: Full=DNA mismatch repair protein MutS [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Sequence ID: Q1LTQ0.1 Length: 855 Range 1: 585 to 792 Score:80.9 bits(198), Expect:3e-14, Method:Compositional matrix adjust., Identities:59/215(27%), Positives:105/215(48%), Gaps:12/215(5%) Query 323 NAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAK 381 + +HP+ L +K IAN L L+ ++ ++ +++GPN GGK+ M+ +I L+A Sbjct 585 DGRHPVVEPLMSKPFIANTLSLSDQN------HMIIITGPNMGGKSTYMRQNALIVLLAY 638 Query 382 AGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEG 441 G FV +A I + IF +G + STF + + I A SL+L+DE Sbjct 639 IGSFVPASQAIIGPIDRIFTRIGAADDLVSGRSTFMVEMTETANILHNATCQSLVLMDEI 698 Query 442 FVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFN---GSMEFEPH 497 GT G+++A + E + + KA + TH+ L TL + N ++E+ Sbjct 699 GRGTSTYDGLSLAWACAESLASRIKAMTLFATHYFELTTLPNKIKGIVNAHFAAIEYN-D 757 Query 498 KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKA 532 + + + NG +SY + +A G+ ++I+ A Sbjct 758 TIAFMHSIQNGAANKSYGLSVASLAGIPRDVIKCA 792 >RecName: Full=DNA mismatch repair protein MutS [Shewanella piezotolerans WP3] Sequence ID: B8CJQ5.1 Length: 860 Range 1: 615 to 794 Score:80.5 bits(197), Expect:4e-14, Method:Compositional matrix adjust., Identities:50/180(28%), Positives:87/180(48%), Gaps:3/180(1%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ + +I LMA G +V + A I + IF +G + STF Sbjct 615 IVTGPNMGGKSTYMRQIALITLMAHIGCYVPAEHAVIGPVDRIFTRIGASDDLASGRSTF 674 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFS 475 + + I A SL+L+DE GT G+++A S EY + A + TH+ Sbjct 675 MVEMTETANILHNATPNSLVLMDEIGRGTSTYDGLSLAWSAAEYLANNLNAMTLFATHYF 734 Query 476 NLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 L L + N ++ H ++ + + G +SY +++A G+ N++I A+ Sbjct 735 ELTQLPEQIKNVENVHLDAVEHGDSIVFMHAVQEGPASRSYGLQVAALAGVPNSVICAAK 794 >RecName: Full=DNA mismatch repair protein MutS [Psychromonas ingrahamii 37] Sequence ID: A1T004.1 Length: 856 Range 1: 586 to 801 Score:80.5 bits(197), Expect:4e-14, Method:Compositional matrix adjust., Identities:59/233(25%), Positives:109/233(46%), Gaps:21/233(9%) Query 324 AKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKA 382 +HP+ + IAN + L K + + +++GPN GGK+ M+ V ++ LMA Sbjct 586 GRHPVVEQVSKTPFIANPVMLNDKRR------MLIITGPNMGGKSTYMRQVALMVLMAHI 639 Query 383 GLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGF 442 G F+ +A+I + IF +G + STF + + I A + SL+L+DE Sbjct 640 GSFIPAQQAKIGPVDRIFTRIGASDDLASGRSTFMVEMTETANILHNATKNSLVLMDEIG 699 Query 443 VGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KL 499 GT G+++A + E + K +A + TH+ L L +N N ++ H + Sbjct 700 RGTSTFDGLSLAWACAEQLAKKIQAYTLFATHYFELTKLPENIPELVNVHLDAVEHGDAI 759 Query 500 LPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQL 552 + + G +SY +++A G+ ++ A+ N+L++L+L Sbjct 760 AFLHAVQEGAANKSYGLQVAALAGVPKEVVSNAK-----------NILRQLEL 801 >RecName: Full=DNA mismatch repair protein MutS [Nitrosomonas europaea ATCC 19718] Sequence ID: Q82U08.1 Length: 873 Range 1: 512 to 803 Score:80.5 bits(197), Expect:4e-14, Method:Compositional matrix adjust., Identities:73/302(24%), Positives:138/302(45%), Gaps:16/302(5%) Query 237 FIEPQALAMQQAQLEKAQNDVEVEE---QRILRELSKDCYLVHEDILSSSEILTQFDNII 293 +I P+ A + L + + E+ +R+L +L+ D + ++I S + + D + Sbjct 512 YIIPELQAFEHKTLSAREQALAREKMLYERLLEQLA-DFIIPLQEIARS---VAELDVLC 567 Query 294 ARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSP 353 A + A + KP F +P + +HP+ + + IAND+ L ++ Sbjct 568 AFAERAALSGYTKPVFTD----DPVLIIEAGRHPVVENQVEHYIANDVQLGAITRENRQ- 622 Query 354 YVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDL 413 + V++GPN GGK+ M+ + L+A G FV A I + IF +G + Sbjct 623 -MLVITGPNMGGKSTYMRQTALTVLLAHCGSFVPAQIARIGPIDQIFTRIGAADDLAGGR 681 Query 414 STFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITT 472 STF + + I A SL+L+DE GT G+A+A + + + ++ + T Sbjct 682 STFMVEMTEAAGILRNATAQSLVLVDEIGRGTSTFDGLALAFAIARHLLTQNQSYTLFAT 741 Query 473 HFSNLKTLADNDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQ 530 H+ L LA+ + N + HK ++ +++ G +SY + +A G+ + +I+ Sbjct 742 HYFELTRLAEEFPQAVNIHVTAVEHKRRIVFLHRIEEGPASRSYGLHVAALAGVPDRVIR 801 Query 531 KA 532 A Sbjct 802 NA 803 >RecName: Full=DNA mismatch repair protein MutS [Aeromonas salmonicida subsp. salmonicida A449] Sequence ID: A4SIL2.1 Length: 851 Range 1: 581 to 792 Score:80.5 bits(197), Expect:5e-14, Method:Compositional matrix adjust., Identities:61/218(28%), Positives:102/218(46%), Gaps:11/218(5%) Query 321 LINA-KHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIAL 378 LI A +HP+ + + IAN + L E + +++GPN GGK+ M+ +I L Sbjct 581 LIEAGRHPVVEQVMSDPFIANPIRL------ERERRMLIITGPNMGGKSTYMRQTALIVL 634 Query 379 MAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILL 438 +A G FV D A I + IF +G + STF + + I A SL+L+ Sbjct 635 LAHIGAFVPADSAHIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILNNATARSLVLM 694 Query 439 DEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH 497 DE GT G+++A + E + K A + TH+ L L + S N ++ H Sbjct 695 DEIGRGTSTYDGLSLAWACAEQLASKIGAYTLFATHYFELTRLPELMSGLANVHLDAVEH 754 Query 498 --KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 + + + G +SY +++A G+ ++I +AR Sbjct 755 GDTIAFMHAVQEGAASRSYGLQVAALAGVPKSVINQAR 792 >RecName: Full=DNA mismatch repair protein MutS [Photobacterium profundum SS9] Sequence ID: Q6LMU0.1 Length: 856 Range 1: 612 to 792 Score:80.1 bits(196), Expect:5e-14, Method:Compositional matrix adjust., Identities:49/181(27%), Positives:87/181(48%), Gaps:3/181(1%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ +IALMA G FV + +I + IF +G + STF Sbjct 612 IITGPNMGGKSTYMRQTALIALMAHVGSFVPAEAVKIGSLDRIFTRIGASDDLASGRSTF 671 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFS 475 + + I A SL+L+DE GT G+++A ++ E+ + K A + TH+ Sbjct 672 MVEMTETANILHNATSKSLVLMDEIGRGTSTYDGLSLAWASAEWLAEKISAMTLFATHYF 731 Query 476 NLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 L L N ++ H ++ + + G +SY + +A G+ +I++A+ Sbjct 732 ELTELPSMMDGLANVHLDAVEHGDEIAFMHAVQEGAASKSYGLAVASLAGVPKAVIKRAK 791 Query 534 T 534 Sbjct 792 A 792 >RecName: Full=DNA mismatch repair protein MutS [Vibrio vulnificus CMCP6] Sequence ID: Q8DC53.2 Length: 853 Range 1: 548 to 789 Score:80.1 bits(196), Expect:5e-14, Method:Compositional matrix adjust., Identities:60/252(24%), Positives:112/252(44%), Gaps:14/252(5%) Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF-LLENKKCIANDLHLA 344 + Q D + + A + +P K +P + +HP+ + + IAN + L Sbjct 548 VAQLDVLQNLAERADTLDYCRPNLTK----DPVVHITAGRHPVVEQVTSDPFIANPIELN 603 Query 345 PKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELG 404 + + + +++GPN GGK+ M+ +IALMA G +V + A I + IF +G Sbjct 604 SQRK------MLIITGPNMGGKSTYMRQTALIALMAHIGSYVPAESATIGSIDRIFTRIG 657 Query 405 DRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK 464 + STF + + I A SL+L+DE GT G+++A ++ + + + Sbjct 658 ASDDLASGRSTFMVEMTETANILHNATANSLVLMDEIGRGTSTYDGLSLAWASAHWLATQ 717 Query 465 -KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAER 521 A + TH+ L L + N ++ H + + + G +SY + +A Sbjct 718 IGAMTLFATHYFELTELPNQLPHLANVHLDAVEHGDSIAFMHAVQEGAASKSYGLAVAGL 777 Query 522 MGLNNNIIQKAR 533 G+ +I+ AR Sbjct 778 AGVPKTVIKNAR 789 >RecName: Full=DNA mismatch repair protein MutS [Burkholderia thailandensis E264] Sequence ID: Q2SXA6.1 Length: 893 Range 1: 573 to 815 Score:80.1 bits(196), Expect:5e-14, Method:Compositional matrix adjust., Identities:63/253(25%), Positives:113/253(44%), Gaps:13/253(5%) Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAP 345 L + D + A + A + + PEF+ + + +HP+ + ++ IAND L Sbjct 573 LAELDLLAAFAERARTLDWVAPEFIDEIGIE----IDQGRHPVVEAQVEQFIANDCAL-- 626 Query 346 KSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGD 405 + + +++GPN GGK+ M+ +IALMA G +V A + IF +G Sbjct 627 ----NSDRKLLLITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGA 682 Query 406 RQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEY-FSVK 464 + STF + + I A SL+L+DE GT G+A+A + + S Sbjct 683 ADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLSHN 742 Query 465 KATVIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIELAERM 522 + + TH+ L L + N + H ++ + + G QSY +++A+ Sbjct 743 RCYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHGIVFLHAVEEGPANQSYGLQVAQLA 802 Query 523 GLNNNIIQKARTY 535 G+ +I+ AR + Sbjct 803 GVPAPVIRAARKH 815 >RecName: Full=DNA mismatch repair protein MutS [Vibrio vulnificus YJ016] Sequence ID: Q7MHR2.2 Length: 853 Range 1: 574 to 789 Score:80.1 bits(196), Expect:5e-14, Method:Compositional matrix adjust., Identities:55/222(25%), Positives:102/222(45%), Gaps:10/222(4%) Query 316 NPRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVG 374 +P + +HP+ + + IAN + L + + + +++GPN GGK+ M+ Sbjct 574 DPVVHITAGRHPVVEQVTSDPFIANPIELNSQRK------MLIITGPNMGGKSTYMRQTA 627 Query 375 IIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELS 434 +IALMA G +V + A I + IF +G + STF + + I A S Sbjct 628 LIALMAHIGSYVPAESATIGSIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATANS 687 Query 435 LILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSME 493 L+L+DE GT G+++A ++ + + + A + TH+ L L + N ++ Sbjct 688 LVLMDEIGRGTSTYDGLSLAWASAHWLATQIGAMTLFATHYFELTELPNQLPHLANVHLD 747 Query 494 FEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 H + + + G +SY + +A G+ +I+ AR Sbjct 748 AVEHGDSIAFMHAVQEGAASKSYGLAVAGLAGVPKTVIKNAR 789 >RecName: Full=DNA mismatch repair protein MutS [Vibrio campbellii ATCC BAA-1116] Sequence ID: A7MTT8.1 Length: 853 Range 1: 577 to 789 Score:80.1 bits(196), Expect:6e-14, Method:Compositional matrix adjust., Identities:56/219(26%), Positives:104/219(47%), Gaps:10/219(4%) Query 319 FSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIA 377 S+ +HP+ + ++ IAN + L+ + + +++GPN GGK+ M+ +IA Sbjct 577 ISIQAGRHPVVEQVTSEPFIANPIELSSNRK------MLIITGPNMGGKSTYMRQTALIA 630 Query 378 LMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLIL 437 LMA G +V + A I + IF +G + STF + + I A + SL+L Sbjct 631 LMAHIGSYVPAESAHIGSLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATKNSLVL 690 Query 438 LDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEP 496 +DE GT G+++A ++ E+ + + A + TH+ L L + N ++ Sbjct 691 MDEIGRGTSTYDGLSLAWASAEWLATQIGAMTLFATHYFELTELPNLLPNLANVHLDAVE 750 Query 497 H--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 H + + + G +SY + +A G+ +I+ AR Sbjct 751 HGDSIAFMHAVQEGAASKSYGLAVAGLAGVPKPVIKNAR 789 >RecName: Full=DNA mismatch repair protein MutS [Xanthomonas campestris pv. campestris str. ATCC 33913] Sequence ID: Q8PBB5.1 Length: 891 Range 1: 569 to 824 Score:80.1 bits(196), Expect:6e-14, Method:Compositional matrix adjust., Identities:65/266(24%), Positives:119/266(44%), Gaps:19/266(7%) Query 277 EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF-LLENKK 335 E + + L++ D + + A + +PE + P + +HP+ + ++ Sbjct 569 EGLKRCASALSELDVLAGFAERAQALDWSQPEL----ESAPCLHIERGRHPVVEAVRDQP 624 Query 336 CIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQD 395 NDL L P + + V++GPN GGK+ M+ +I L+A G +V +A I Sbjct 625 FEPNDLDLHPDRR------MLVITGPNMGGKSTYMRQNALIVLLAHIGSYVPASRAVIGP 678 Query 396 YENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMAR 455 + I +G + STF +A+ I A SL+L+DE GT G+A+A Sbjct 679 IDRILTRIGAGDDLARGQSTFMVEMAETSYILHHATPQSLVLMDEIGRGTSTYDGLALAD 738 Query 456 STLEYFS-VKKATVIITTHFSNLKTLAD-----NDSRFFNGSMEFEPH--KLLPTYKLLN 507 + + + + + TH+ L LAD S N ++ H +L+ + + + Sbjct 739 AVARHLAHTNRCYTLFATHYFELTALADASHAGGGSGIANVHLDAVEHGERLVFMHAVKD 798 Query 508 GIPGQSYAIELAERMGLNNNIIQKAR 533 G +S+ +++A GL +Q+AR Sbjct 799 GPANRSFGLQVAALAGLPKAAVQQAR 824 >RecName: Full=DNA mismatch repair protein MutS [Xanthomonas campestris pv. campestris str. 8004] Sequence ID: Q4US90.2 Length: 873 Range 1: 551 to 806 Score:79.7 bits(195), Expect:6e-14, Method:Compositional matrix adjust., Identities:65/266(24%), Positives:119/266(44%), Gaps:19/266(7%) Query 277 EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF-LLENKK 335 E + + L++ D + + A + +PE + P + +HP+ + ++ Sbjct 551 EGLKRCASALSELDVLAGFAERAQALDWSQPEL----ESAPCLHIERGRHPVVEAVRDQP 606 Query 336 CIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQD 395 NDL L P + + V++GPN GGK+ M+ +I L+A G +V +A I Sbjct 607 FEPNDLDLHPDRR------MLVITGPNMGGKSTYMRQNALIVLLAHIGSYVPASRAVIGP 660 Query 396 YENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMAR 455 + I +G + STF +A+ I A SL+L+DE GT G+A+A Sbjct 661 IDRILTRIGAGDDLARGQSTFMVEMAETSYILHHATPQSLVLMDEIGRGTSTYDGLALAD 720 Query 456 STLEYFS-VKKATVIITTHFSNLKTLAD-----NDSRFFNGSMEFEPH--KLLPTYKLLN 507 + + + + + TH+ L LAD S N ++ H +L+ + + + Sbjct 721 AVARHLAHTNRCYTLFATHYFELTALADASHAGGGSGIANVHLDAVEHGERLVFMHAVKD 780 Query 508 GIPGQSYAIELAERMGLNNNIIQKAR 533 G +S+ +++A GL +Q+AR Sbjct 781 GPANRSFGLQVAALAGLPKAAVQQAR 806 >RecName: Full=DNA mismatch repair protein MutS [Vibrio atlanticus LGP32] Sequence ID: B7VK59.1 Length: 853 Range 1: 610 to 790 Score:79.3 bits(194), Expect:9e-14, Method:Compositional matrix adjust., Identities:49/181(27%), Positives:86/181(47%), Gaps:3/181(1%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ +IALMA G +V + A I + IF +G + STF Sbjct 610 IITGPNMGGKSTYMRQTALIALMAHIGCYVPAESATIGSIDRIFTRIGASDDLASGRSTF 669 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFS 475 + + I A SL+L+DE GT G+++A ++ E+ + + A + TH+ Sbjct 670 MVEMTETANILHNATPNSLVLMDEIGRGTSTYDGLSLAWASAEWLANQINAMTLFATHYF 729 Query 476 NLKTLADNDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 L L + N ++ H + + + G +SY + +A G+ +I+ AR Sbjct 730 ELTELPNQIPTLANVHLDAVEHGDSIAFMHAVQEGAASKSYGLAVAGLAGVPKAVIKNAR 789 Query 534 T 534 Sbjct 790 A 790 >RecName: Full=DNA mismatch repair protein MutS [Burkholderia cenocepacia J2315] Sequence ID: B4ED83.1 Length: 885 Range 1: 597 to 804 Score:79.3 bits(194), Expect:9e-14, Method:Compositional matrix adjust., Identities:56/214(26%), Positives:98/214(45%), Gaps:9/214(4%) Query 325 KHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGL 384 +HP+ + ++ IAND P+ + + +++GPN GGK+ M+ +IALMA G Sbjct 597 RHPVVEAQVEQFIANDCRFGPERK------LLLITGPNMGGKSTFMRQTALIALMAYVGS 650 Query 385 FVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVG 444 +V A + IF +G + STF + + I A SL+L+DE G Sbjct 651 YVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRG 710 Query 445 TDPAIGVAMARSTLEYFSVKKAT-VIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLP 501 T G+A+A + + A + TH+ L L + N + H ++ Sbjct 711 TSTFDGLALAWAIARHLLAHNACYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHGIVF 770 Query 502 TYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY 535 + + G QSY +++A+ G+ +I+ AR + Sbjct 771 LHAVNEGPANQSYGLQVAQLAGVPAPVIRAARKH 804 >RecName: Full=DNA mismatch repair protein MutS [Bordetella bronchiseptica RB50] Sequence ID: Q7WLT5.2 Length: 876 Range 1: 558 to 857 Score:78.6 bits(192), Expect:2e-13, Method:Compositional matrix adjust., Identities:71/316(22%), Positives:140/316(44%), Gaps:22/316(6%) Query 282 SSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDL 341 + L + D + A + A + PE + +++ + +HP+ ++ N Sbjct 558 CASALAELDTLAALAEHARRHDWVAPELIDGAEID----IEAGRHPVVERAIERFTPNGC 613 Query 342 HLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFV 401 L + + + +++GPN GGK+ M+ V +IAL+A+ G FV +A + + IF Sbjct 614 RL------DQTRRMLLITGPNMGGKSTYMRQVALIALLARTGSFVPATRARVGRLDRIFT 667 Query 402 ELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARS-TLEY 460 +G + STF + + I + SL+L+DE GT G+A+A + Sbjct 668 RIGAADDLAGGRSTFMMEMTEAAAILAASTPASLVLMDEIGRGTSTYDGLALAWAIAYRL 727 Query 461 FSVKKATVIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIEL 518 + +A + TH+ L L N + ++ +++ G +SY I++ Sbjct 728 LTHNRALTLFATHYFELTRLPAEQPTAANVHLAAAESAGGIVFLHEVREGPASRSYGIQV 787 Query 519 AERMGLNNNIIQKARTYYGSESERME---NLLKELQLKRIEINEELTKQNLLTQKLDSEF 575 A+R G+ +I++A E ER+E +L L ++ ++ Q + Q D+ Sbjct 788 AQRAGVPAAVIRQA----SRELERLEAQGAPTPQLGLFAAALDADVQSQAMTEQAEDA-- 841 Query 576 KSLKNEKEQLSELRGD 591 +L ++QL+ + D Sbjct 842 AALAQLRDQLAAIDPD 857 >RecName: Full=DNA mismatch repair protein MutS [Bordetella pertussis Tohama I] Sequence ID: Q7VY01.1 Length: 883 Range 1: 565 to 869 Score:78.2 bits(191), Expect:2e-13, Method:Compositional matrix adjust., Identities:74/331(22%), Positives:140/331(42%), Gaps:35/331(10%) Query 282 SSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDL 341 + L + D + A + A + PE + +++ + +HP+ ++ N Sbjct 565 CASALAELDTLAALAEHARRHDWVAPELIDGAEID----IEAGRHPVVERAIERFTPNGC 620 Query 342 HLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFV 401 L + + + +++GPN GGK+ M+ V +IAL+A+ G FV +A + + IF Sbjct 621 RL------DQTRRMLLITGPNMGGKSTYMRQVALIALLARTGSFVPATRARVGRLDRIFT 674 Query 402 ELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARS-TLEY 460 +G + STF + + I + SL+L+DE GT G+A+A + Sbjct 675 RIGAADDLAGGRSTFMMEMTEAAAILAASTPASLVLMDEIGRGTSTYDGLALAWAIAYRL 734 Query 461 FSVKKATVIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIEL 518 + +A + TH+ L L N + ++ +++ G +SY I++ Sbjct 735 LTHNRALTLFATHYFELTRLPAEQPTAANVHLAAAESAGGIVFLHEVREGPASRSYGIQV 794 Query 519 AERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIEINEELTKQ-NLLTQKLDSEFKS 577 A+R G+ +I++A +L+R+E T Q L LD++ +S Sbjct 795 AQRAGVPAAVIRQASR----------------ELERLEAQGAPTPQLGLFAAALDADVQS 838 Query 578 -----LKNEKEQLSELRGDLVENYRNKLQKR 603 + L++LR LV + L R Sbjct 839 QAMTEQAEDAAALAQLRDQLVAIDPDSLTPR 869 >RecName: Full=DNA mismatch repair protein msh2 [Schizosaccharomyces pombe 972h-] Sequence ID: O74773.2 Length: 982 Range 1: 683 to 899 Score:78.6 bits(192), Expect:2e-13, Method:Compositional matrix adjust., Identities:59/224(26%), Positives:104/224(46%), Gaps:16/224(7%) Query 318 RFSLINAKHPLFLLENK-KCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGII 376 R L A+HP ++ K I ND++L S + +++GPN GGK+ ++ VG+I Sbjct 683 RLYLKQARHPCLEAQDDVKFIPNDVNLE-----HGSSELLIITGPNMGGKSTYIRQVGVI 737 Query 377 ALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLI 436 +MA+ G V C+ A++ + I +G ++ + +STF + + I A SLI Sbjct 738 TVMAQIGCPVPCEVADLDIIDAILARVGASDSQLKGISTFMAEMLETATILRAATPRSLI 797 Query 437 LLDEGFVGTDPAIGVAMARSTLEYFSVKKAT-VIITTHFSNLKTLADNDSRFFN------ 489 ++DE GT G +A + E+ + + TH+ + L++ + N Sbjct 798 IIDELGRGTSTTDGFGLAWAITEHIVTQIGCFCLFATHYHEMTKLSEEITTVKNLHVTAY 857 Query 490 -GSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKA 532 G E + LL Y + G +S+ I +A+ II+ A Sbjct 858 VGDSESKDVALL--YNVCEGASDRSFGIHVAKLAHFPPKIIEMA 899 >RecName: Full=DNA mismatch repair protein MutS [Bordetella parapertussis 12822] Sequence ID: Q7W880.2 Length: 883 Range 1: 565 to 864 Score:78.2 bits(191), Expect:2e-13, Method:Compositional matrix adjust., Identities:71/316(22%), Positives:140/316(44%), Gaps:22/316(6%) Query 282 SSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDL 341 + L + D + A + A + PE + +++ + +HP+ ++ N Sbjct 565 CASALAELDTLAALAEHARRHDWVAPELIDGAEID----IEAGRHPVVERAIERFTPNGC 620 Query 342 HLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFV 401 L + + + +++GPN GGK+ M+ V +IAL+A+ G FV +A + + IF Sbjct 621 RL------DQTRRMLLITGPNMGGKSTYMRQVALIALLARTGSFVPATRARVGRLDRIFT 674 Query 402 ELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARS-TLEY 460 +G + STF + + I + SL+L+DE GT G+A+A + Sbjct 675 RIGAADDLAGGRSTFMMEMTEAAAILAASTPASLVLMDEIGRGTSTYDGLALAWAIAYRL 734 Query 461 FSVKKATVIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIEL 518 + +A + TH+ L L N + ++ +++ G +SY I++ Sbjct 735 LTHNRALTLFATHYFELTRLPAEQPTAANVHLAAAESAGGIVFLHEVREGPASRSYGIQV 794 Query 519 AERMGLNNNIIQKARTYYGSESERME---NLLKELQLKRIEINEELTKQNLLTQKLDSEF 575 A+R G+ +I++A E ER+E +L L ++ ++ Q + Q D+ Sbjct 795 AQRAGVPAAVIRQA----SRELERLEAQGAPTPQLGLFAAALDADVQSQAMTEQAEDA-- 848 Query 576 KSLKNEKEQLSELRGD 591 +L ++QL+ + D Sbjct 849 AALAQLRDQLAAIDPD 864 >RecName: Full=DNA mismatch repair protein MutS [Xylella fastidiosa Temecula1] Sequence ID: Q87CI8.1 Length: 868 Range 1: 546 to 801 Score:78.2 bits(191), Expect:2e-13, Method:Compositional matrix adjust., Identities:62/266(23%), Positives:121/266(45%), Gaps:19/266(7%) Query 277 EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF-LLENKK 335 E + + L++ D ++ + A + ++PE L+ + +HP+ + ++ Sbjct 546 EPLKRCAAALSELDVLVCFAERAQTLDWVRPELEHTSCLH----IEGGRHPVVEAVREQR 601 Query 336 CIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQD 395 NDL+L P+ + + V++GPN GGK+ M+ +I L+A G +V +A I Sbjct 602 FEPNDLYLHPERR------MLVITGPNMGGKSTYMRQNALIVLLAYIGSYVPASRALIGP 655 Query 396 YENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMAR 455 + I +G + STF + + I A SL+L+DE GT G+A+A Sbjct 656 IDRIMTRIGAGDDLARGQSTFMLEMTETSYILHHATAQSLVLMDEIGRGTSTYDGLALAD 715 Query 456 STLEYFS-VKKATVIITTHFSNLKTLADND-----SRFFNGSMEFEPH--KLLPTYKLLN 507 + + + + + + TH+ L LA+ S N + H +L+ + + + Sbjct 716 AVARHLAHINRCYTLFATHYFELTALAEETYEGGLSGIANVHFDAVEHSERLVFMHTVKD 775 Query 508 GIPGQSYAIELAERMGLNNNIIQKAR 533 G +S+ +++A GL + +AR Sbjct 776 GPANRSFGLQVAALAGLPAATVAQAR 801 >RecName: Full=DNA mismatch repair protein MutS [Rhodoferax ferrireducens T118] Sequence ID: Q21XE3.1 Length: 882 Range 1: 523 to 829 Score:78.2 bits(191), Expect:2e-13, Method:Compositional matrix adjust., Identities:75/318(24%), Positives:133/318(41%), Gaps:20/318(6%) Query 237 FIEPQALAMQQAQLEKAQNDVEVEEQRILRELSKDCYLVHEDILSSSEILTQFDNIIART 296 FI P+ A + L AQ E+ + ++ + + + L D + A T Sbjct 523 FITPELKAFEDKAL-SAQERALAREKWLYEQVLDQLQVFVPALTRVARALATLDALCALT 581 Query 297 KFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF---LLENKKC--IANDLHLAPKSQGET 351 + + + P+F+K P + +HP+ L E IAND + PK + + Sbjct 582 ERSLTLDWCAPQFVK----EPCLDITQGRHPVVQARLAETSSGAFIANDTRMGPKQRMQ- 636 Query 352 SPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREE 411 +++GPN GGK+ M+ + +I L+A G +V + + I +G + Sbjct 637 -----IITGPNMGGKSTYMRQIAVIVLLASMGSYVPASACRLGPIDAIHTRIGAADDLAN 691 Query 412 DLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVII 470 STF + + +I A SL+L+DE GT G+A+A S K +A + Sbjct 692 AQSTFMLEMLEAAQILIAATPNSLVLMDEIGRGTSTFDGLALASSIATQLHDKTQAYTLF 751 Query 471 TTHFSNLKTLADNDSRFFN--GSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNI 528 TH+ L N S ++ +++ G +SY I++A G+ + Sbjct 752 ATHYFELTEFPAQHHAAINVHVSAAEAGRDIVFLHEIQPGPASKSYGIQVARLAGMPAAV 811 Query 529 IQKAR-TYYGSESERMEN 545 + +AR T ES+ +N Sbjct 812 LNQARQTLAALESQATQN 829 >RecName: Full=DNA mismatch repair protein MutS [Hahella chejuensis KCTC 2396] Sequence ID: Q2SBR5.2 Length: 860 Range 1: 586 to 794 Score:77.8 bits(190), Expect:2e-13, Method:Compositional matrix adjust., Identities:53/215(25%), Positives:99/215(46%), Gaps:10/215(4%) Query 323 NAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAK 381 +HP+ + + NDL+L K + + +++GPN GGK+ M+ I ++A Sbjct 586 GGRHPVVEQVSQDPFVPNDLNLQDKHR------MLIITGPNMGGKSTYMRQTACIVILAY 639 Query 382 AGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEG 441 G FV K I + +F +G + STF + + I A SL+L+DE Sbjct 640 CGSFVPAAKVVIGPIDRVFTRMGSSDDIAGGRSTFMVEMTETANILHYATRQSLVLMDEV 699 Query 442 FVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--K 498 GT G+++A + E+ + + +A + TH+ L L + N + H Sbjct 700 GRGTSTFDGLSLAWACAEHLAREIQAFTLFATHYFELTALPKTHANVANVHLTATEHNDS 759 Query 499 LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 ++ + + G +SY I++A+ G+ +I +A+ Sbjct 760 IVFLHTVHEGPASKSYGIQVAQLAGVPPQVINQAQ 794 >RecName: Full=MutS protein homolog 5 [Caenorhabditis elegans] Sequence ID: Q19272.2 Length: 1369 Range 1: 600 to 845 Score:77.0 bits(188), Expect:5e-13, Method:Compositional matrix adjust., Identities:63/253(25%), Positives:123/253(48%), Gaps:16/253(6%) Query 317 PRFSLINAKHPLFLLENKKC-IANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGI 375 P + HP+ +L KK + N + S G +++GPNA GK+V MK++GI Sbjct 600 PVIEAVELYHPISVLVVKKSFVPNQV-----SSGRDGIKASIITGPNACGKSVYMKSIGI 654 Query 376 IALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSL 435 + ++ G FV A+I + I + + + +STF+ + Q+ +A SL Sbjct 655 MVFLSHIGSFVPARHAKIGIVDRIVTRMFTVDSVLDGMSTFAKDVEQVALALRKATGNSL 714 Query 436 ILLDEGFVGTDPAIGVAMARSTLEYFSVKKAT----VIITTHF---SNLKTLADNDSRFF 488 +++DE GT +G+++ S + Y+ + A + +++HF N L N + F Sbjct 715 VIIDEFGKGTMTEVGLSLLASVMTYWMNRGADRCPHIFLSSHFHALPNYIPLETNIATFL 774 Query 489 NGSMEFEP-HKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLL 547 ++ E K+ +++ G+ S+A+ +A+ G+ +I +A Y ++ + LL Sbjct 775 TFTVLREAGGKIKYLFRMTPGLVDCSFALSVAKEEGIPPPVIGRACRIY--KALKAGTLL 832 Query 548 KELQLKRIEINEE 560 KE++ + NE+ Sbjct 833 KEIKAEVSNDNEK 845 >RecName: Full=DNA mismatch repair protein MutS [Elusimicrobium minutum Pei191] Sequence ID: B2KB17.1 Length: 851 Range 1: 570 to 791 Score:76.6 bits(187), Expect:6e-13, Method:Compositional matrix adjust., Identities:64/235(27%), Positives:103/235(43%), Gaps:23/235(9%) Query 309 FLKPRDLNPRFSLINAKHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTV 368 LK DL R ++ A PL + ND+ L ++Q + V++GPN GGK+V Sbjct 570 ILKAADL--RHPVVEACLPL-----GSFVPNDIDLGGETQ------ISVITGPNMGGKSV 616 Query 369 AMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISE 428 +K ++ ++A+ G FV A + + I +G + STF + + I Sbjct 617 YLKQAAVLVILAQMGSFVPAASAHVGIVDKIMTRIGAQDAIAMGQSTFMVEMKETSHILA 676 Query 429 QANELSLILLDEGFVGTDPAIGVAMARSTLEYF---SVKKATVIITTHFSNLKTLADNDS 485 SLILLDE GT G+++A + E+ A V+ TH+ L L + Sbjct 677 SCTPKSLILLDEVGRGTSTFDGISIAWAITEFLYKPHGGGAKVLFATHYFELTDLENKYK 736 Query 486 RFFNGSMEFEPH-------KLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 N E + + K+ YK+ G +SY I + E GL +I +A+ Sbjct 737 GIKNFHAEVQEYKDADGQSKIAFLYKIKEGAGDKSYGIHVGELAGLPATVIVRAK 791 >RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS protein homolog 3 [Botrytis cinerea B05.10] Sequence ID: A6RPB6.3 Length: 1134 Range 1: 808 to 1016 Score:76.3 bits(186), Expect:9e-13, Method:Compositional matrix adjust., Identities:61/223(27%), Positives:105/223(47%), Gaps:19/223(8%) Query 264 ILRELSKDCYLVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLIN 323 L E+S L+ + I L D +++ A + KP F ++ S+I Sbjct 808 FLSEISTHYALIRDTI----SHLATLDCLLSLATVASLPGYCKPTFTSSTEI----SVIG 859 Query 324 AKHPLF-LLENKKCIANDLHLAPKSQGETSP---YVWVLSGPNAGGKTVAMKTVGIIALM 379 +HP+ L I ND L+ TSP +L+GPN GGK+ ++ V +I+++ Sbjct 860 GRHPMVEQLLPSAYIPNDTSLS------TSPDHTRALLLTGPNMGGKSSYVRQVALISIL 913 Query 380 AKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLD 439 A+ G +V + A + + I+ +G + STF L++ I + A SL++LD Sbjct 914 AQIGSYVPAESARLGLLDGIYTRMGAYDSLFTAQSTFMVELSETASILKSAGPRSLVILD 973 Query 440 EGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLA 481 E GT GVA+A + L++ + K + TH+ L ++A Sbjct 974 ELGRGTSTHDGVAIAEAVLDWVVRETKCLCLFITHYQTLASVA 1016 >RecName: Full=DNA mismatch repair protein MutS [Bordetella avium 197N] Sequence ID: Q2KWZ4.1 Length: 875 Range 1: 623 to 809 Score:75.9 bits(185), Expect:9e-13, Method:Compositional matrix adjust., Identities:52/191(27%), Positives:93/191(48%), Gaps:7/191(3%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ V +IAL+A+ G FV +A + + IF +G + STF Sbjct 623 LITGPNMGGKSTYMRQVALIALLARTGSFVPARRARVGKIDRIFTRIGAADDLAGGRSTF 682 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLE-YFSVKKATVIITTHFS 475 + + I + SL+L+DE GT G+A+A + + + +A + TH+ Sbjct 683 MMEMTEAAAILAASTSNSLVLMDEIGRGTSTYDGLALAWAIAQRLITHNRALTLFATHYF 742 Query 476 NLKTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 L L + N + ++ +++ G +SY I++A+R G+ +I+ A Sbjct 743 ELTRLPSEQATAANVHLAAAESAGGIVFLHEVREGPASRSYGIQVAQRAGIPAAVIRHAT 802 Query 534 TYYGSESERME 544 E ER+E Sbjct 803 ----RELERLE 809 >RecName: Full=DNA mismatch repair protein MutS [Burkholderia vietnamiensis G4] Sequence ID: A4JFW7.1 Length: 886 Range 1: 560 to 805 Score:75.9 bits(185), Expect:1e-12, Method:Compositional matrix adjust., Identities:61/256(24%), Positives:111/256(43%), Gaps:13/256(5%) Query 283 SEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLH 342 + L + D + A + A + + P F D+ + +HP+ + ++ IAND Sbjct 560 ASALAELDVLAAFAERARTLDWVAPTFTD--DIG--IEIEQGRHPVVEAQVEQFIANDCR 615 Query 343 LAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVE 402 + + +++GPN GGK+ M+ +IALMA G +V A + IF Sbjct 616 FGADRK------LLLITGPNMGGKSTFMRQTALIALMAYVGSYVPAKSACFGPIDRIFTR 669 Query 403 LGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFS 462 +G + STF + + I A SL+L+DE GT G+A+A + + Sbjct 670 IGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLL 729 Query 463 VKKAT-VIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIELA 519 + + TH+ L L + N + H ++ + + G QSY +++A Sbjct 730 AQNGCYTLFATHYFELTQLPSEFPQAANVHLSAVEHGHGIVFLHAVNEGPANQSYGLQVA 789 Query 520 ERMGLNNNIIQKARTY 535 + G+ +I+ AR + Sbjct 790 QLAGVPAPVIRAARKH 805 >RecName: Full=DNA mismatch repair protein MutS [Burkholderia lata] Sequence ID: Q39EX8.1 Length: 885 Range 1: 597 to 804 Score:75.5 bits(184), Expect:1e-12, Method:Compositional matrix adjust., Identities:55/214(26%), Positives:97/214(45%), Gaps:9/214(4%) Query 325 KHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGL 384 +HP+ + ++ IAND + + + +++GPN GGK+ M+ +IALMA G Sbjct 597 RHPVVEAQVEQFIANDCRFGTERK------LLLITGPNMGGKSTFMRQTALIALMAYVGS 650 Query 385 FVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVG 444 +V A + IF +G + STF + + I A SL+L+DE G Sbjct 651 YVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRG 710 Query 445 TDPAIGVAMARSTLEYFSVKKAT-VIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLP 501 T G+A+A + + A + TH+ L L + N + H ++ Sbjct 711 TSTFDGLALAWAIARHLLAHNACYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHGIVF 770 Query 502 TYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY 535 + + G QSY +++A+ G+ +I+ AR + Sbjct 771 LHAVNEGPANQSYGLQVAQLAGVPAPVIRAARKH 804 >RecName: Full=DNA mismatch repair protein MutS [Burkholderia cenocepacia HI2424] Sequence ID: A0K8L2.1 Length: 885 Range 1: 597 to 804 Score:75.5 bits(184), Expect:1e-12, Method:Compositional matrix adjust., Identities:55/214(26%), Positives:97/214(45%), Gaps:9/214(4%) Query 325 KHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGL 384 +HP+ + ++ IAND + + + +++GPN GGK+ M+ +IALMA G Sbjct 597 RHPVVEAQVEQFIANDCRFGTERK------LLLITGPNMGGKSTFMRQTALIALMAYVGS 650 Query 385 FVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVG 444 +V A + IF +G + STF + + I A SL+L+DE G Sbjct 651 YVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRG 710 Query 445 TDPAIGVAMARSTLEYFSVKKAT-VIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLP 501 T G+A+A + + A + TH+ L L + N + H ++ Sbjct 711 TSTFDGLALAWAIARHLLAHNACYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHGIVF 770 Query 502 TYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY 535 + + G QSY +++A+ G+ +I+ AR + Sbjct 771 LHAVNEGPANQSYGLQVAQLAGVPAPVIRAARKH 804 >RecName: Full=DNA mismatch repair protein MutS [Burkholderia orbicola MC0-3] Sequence ID: B1JUW8.1 Length: 885 Range 1: 597 to 804 Score:75.5 bits(184), Expect:1e-12, Method:Compositional matrix adjust., Identities:55/214(26%), Positives:97/214(45%), Gaps:9/214(4%) Query 325 KHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGL 384 +HP+ + ++ IAND + + + +++GPN GGK+ M+ +IALMA G Sbjct 597 RHPVVEAQVEQFIANDCRFGTERK------LLLITGPNMGGKSTFMRQTALIALMAYVGS 650 Query 385 FVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVG 444 +V A + IF +G + STF + + I A SL+L+DE G Sbjct 651 YVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRG 710 Query 445 TDPAIGVAMARSTLEYFSVKKAT-VIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLP 501 T G+A+A + + A + TH+ L L + N + H ++ Sbjct 711 TSTFDGLALAWAIARHLLAHNACYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHGIVF 770 Query 502 TYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY 535 + + G QSY +++A+ G+ +I+ AR + Sbjct 771 LHAVNEGPANQSYGLQVAQLAGVPAPVIRAARKH 804 >RecName: Full=DNA mismatch repair protein MutS [Xanthomonas oryzae pv. oryzae KACC 10331] Sequence ID: Q5H2C5.1 Length: 873 Range 1: 560 to 806 Score:75.5 bits(184), Expect:2e-12, Method:Compositional matrix adjust., Identities:63/257(25%), Positives:113/257(43%), Gaps:19/257(7%) Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF-LLENKKCIANDLHLA 344 L++ D + + A + +PE D P + +HP+ + + NDL L Sbjct 560 LSELDVLAGFAERAQALDWSQPEL----DSAPCLRIERGRHPVVEAVRDHPFEPNDLDL- 614 Query 345 PKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELG 404 + + V++GPN GGK+ M+ +I L+A G +V +A I + I +G Sbjct 615 -----HSDRRMLVITGPNMGGKSTYMRQNALIVLLAHIGSYVPASRAVIGPIDRILTRIG 669 Query 405 DRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFS-V 463 + STF +A+ I A SL+L+DE GT G+A+A + + + Sbjct 670 AGDDLARGQSTFMVEMAETSYILHHATPQSLVLMDEIGRGTSTYDGLALADAVARHLAHT 729 Query 464 KKATVIITTHFSNLKTLAD-----NDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAI 516 + + TH+ L LAD S N ++ H +L+ + + +G +S+ + Sbjct 730 NRCYTLFATHYFELTALADESHDGGASGIANVHLDAVEHGERLVFMHAVKDGPANRSFGL 789 Query 517 ELAERMGLNNNIIQKAR 533 ++A GL + +AR Sbjct 790 QVAALAGLPKAAVTQAR 806 >RecName: Full=DNA mismatch repair protein MutS [Xanthomonas euvesicatoria pv. vesicatoria str. 85-10] Sequence ID: Q3BVY0.1 Length: 873 Range 1: 560 to 806 Score:75.1 bits(183), Expect:2e-12, Method:Compositional matrix adjust., Identities:63/257(25%), Positives:114/257(44%), Gaps:19/257(7%) Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF-LLENKKCIANDLHLA 344 L++ D + + A + +PE D P + + +HP+ + + NDL L Sbjct 560 LSELDVLAGFAERAQALDWSQPEL----DHAPCLRIEHGRHPVVEAVREQPFEPNDLDL- 614 Query 345 PKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELG 404 + + V++GPN GGK+ M+ +I L+A G +V +A I + I +G Sbjct 615 -----HSDRRMLVITGPNMGGKSTYMRQNALIVLLAHIGSYVPASRAVIGPIDRILTRIG 669 Query 405 DRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFS-V 463 + STF +A+ I A SL+L+DE GT G+A+A + + + Sbjct 670 AGDDLARGQSTFMVEMAETSYILHHATPQSLVLMDEIGRGTSTYDGLALADAVARHLAHT 729 Query 464 KKATVIITTHFSNLKTLAD-----NDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAI 516 + + TH+ L LAD S N ++ H +L+ + + +G +S+ + Sbjct 730 NRCYTLFATHYFELTALADESHAGGASGIANVHLDAVEHGERLVFMHAVKDGPANRSFGL 789 Query 517 ELAERMGLNNNIIQKAR 533 ++A GL + +AR Sbjct 790 QVAALAGLPKAAVTQAR 806 >RecName: Full=DNA mismatch repair protein MutS [Burkholderia orbicola AU 1054] Sequence ID: Q1BHQ1.1 Length: 885 Range 1: 597 to 804 Score:75.1 bits(183), Expect:2e-12, Method:Compositional matrix adjust., Identities:55/214(26%), Positives:97/214(45%), Gaps:9/214(4%) Query 325 KHPLFLLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGL 384 +HP+ + ++ IAND + + + +++GPN GGK+ M+ +IALMA G Sbjct 597 RHPVVEAQVEQFIANDCRFGTERK------LLLITGPNMGGKSTFMRQTALIALMAYVGS 650 Query 385 FVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVG 444 +V A + IF +G + STF + + I A SL+L+DE G Sbjct 651 YVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRG 710 Query 445 TDPAIGVAMARSTLEYFSVKKAT-VIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLP 501 T G+A+A + + A + TH+ L L + N + H ++ Sbjct 711 TSTFDGLALAWAIARHLLAHNACYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHGIVF 770 Query 502 TYKLLNGIPGQSYAIELAERMGLNNNIIQKARTY 535 + + G QSY +++A+ G+ +I+ AR + Sbjct 771 LHAVNEGPANQSYGLQVAQLAGVPAPVIRAARKH 804 >RecName: Full=DNA mismatch repair protein MutS [Xanthomonas citri subsp. citri 306] Sequence ID: Q8PMX2.1 Length: 902 Range 1: 589 to 835 Score:75.1 bits(183), Expect:2e-12, Method:Compositional matrix adjust., Identities:63/257(25%), Positives:113/257(43%), Gaps:19/257(7%) Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF-LLENKKCIANDLHLA 344 L++ D + + A + +PE D P + +HP+ + + NDL L Sbjct 589 LSELDVLAGFAERAQALDWSQPEL----DSAPCLRIERGRHPVVEAVREQPFEPNDLDL- 643 Query 345 PKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELG 404 + + V++GPN GGK+ M+ +I L+A G +V +A I + I +G Sbjct 644 -----HSDRRMLVITGPNMGGKSTYMRQNALIVLLAHIGSYVPASRAVIGPIDRILTRIG 698 Query 405 DRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFS-V 463 + STF +A+ I A SL+L+DE GT G+A+A + + + Sbjct 699 AGDDLARGQSTFMVEMAETSYILHHATPQSLVLMDEIGRGTSTYDGLALADAVARHLAQT 758 Query 464 KKATVIITTHFSNLKTLAD-----NDSRFFNGSMEFEPH--KLLPTYKLLNGIPGQSYAI 516 + + TH+ L LAD S N ++ H +L+ + + +G +S+ + Sbjct 759 NRCYTLFATHYFELTALADASHAGGASGIANVHLDAVEHGERLVFMHAVKDGPANRSFGL 818 Query 517 ELAERMGLNNNIIQKAR 533 ++A GL + +AR Sbjct 819 QVAALAGLPKAAVTQAR 835 >RecName: Full=DNA mismatch repair protein MutS [Burkholderia ambifaria AMMD] Sequence ID: Q0BDU3.1 Length: 886 Range 1: 559 to 804 Score:74.7 bits(182), Expect:3e-12, Method:Compositional matrix adjust., Identities:60/256(23%), Positives:111/256(43%), Gaps:13/256(5%) Query 283 SEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLH 342 + L + D + A + A + + P F + + +HP+ + ++ IAND Sbjct 559 ASALAELDVLAAFAERARTLDWVAPTFTDEIGIE----IEQGRHPVVEAQVEQFIANDCR 614 Query 343 LAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVE 402 + + + +++GPN GGK+ M+ +IALMA G +V A + IF Sbjct 615 FGAERK------LLLITGPNMGGKSTFMRQTALIALMAYVGSYVPAKSACFGPIDRIFTR 668 Query 403 LGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFS 462 +G + STF + + I A SL+L+DE GT G+A+A + + Sbjct 669 IGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLL 728 Query 463 VKKAT-VIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIELA 519 + + TH+ L L + N + H ++ + + G QSY +++A Sbjct 729 AQNGCYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHGIVFLHAVNEGPANQSYGLQVA 788 Query 520 ERMGLNNNIIQKARTY 535 + G+ +I+ AR + Sbjct 789 QLAGVPAPVIRAARKH 804 >RecName: Full=DNA mismatch repair protein MutS [Burkholderia ambifaria MC40-6] Sequence ID: B1YSP3.1 Length: 885 Range 1: 559 to 804 Score:74.7 bits(182), Expect:3e-12, Method:Compositional matrix adjust., Identities:60/256(23%), Positives:111/256(43%), Gaps:13/256(5%) Query 283 SEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLFLLENKKCIANDLH 342 + L + D + A + A + + P F + + +HP+ + ++ IAND Sbjct 559 ASALAELDVLAAFAERARTLDWVAPTFTDEIGIE----IEQGRHPVVEAQVEQFIANDCR 614 Query 343 LAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVE 402 + + + +++GPN GGK+ M+ +IALMA G +V A + IF Sbjct 615 FGAERK------LLLITGPNMGGKSTFMRQTALIALMAYVGSYVPAKSACFGPIDRIFTR 668 Query 403 LGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFS 462 +G + STF + + I A SL+L+DE GT G+A+A + + Sbjct 669 IGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLL 728 Query 463 VKKAT-VIITTHFSNLKTLADNDSRFFNGSMEF--EPHKLLPTYKLLNGIPGQSYAIELA 519 + + TH+ L L + N + H ++ + + G QSY +++A Sbjct 729 AQNGCYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHGIVFLHAVNEGPANQSYGLQVA 788 Query 520 ERMGLNNNIIQKARTY 535 + G+ +I+ AR + Sbjct 789 QLAGVPAPVIRAARKH 804 >RecName: Full=DNA mismatch repair protein MutS [Xylella fastidiosa 9a5c] Sequence ID: Q9PCR2.2 Length: 868 Range 1: 546 to 743 Score:74.3 bits(181), Expect:3e-12, Method:Compositional matrix adjust., Identities:52/208(25%), Positives:96/208(46%), Gaps:12/208(5%) Query 277 EDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF-LLENKK 335 E + + L++ D ++ + A + ++PE L+ + +HP+ + ++ Sbjct 546 EPLKRCAAALSELDVLVCFAERAQTLDWVRPELEHTSCLH----IEGGRHPVVEAVREQR 601 Query 336 CIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQD 395 NDL L P+ + + V++GPN GGK+ M+ +I L+A G +V +A I Sbjct 602 FEPNDLDLHPERR------MLVITGPNMGGKSTYMRQNALIVLLAYIGSYVPASRALIGP 655 Query 396 YENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMAR 455 + I +G + STF + + I A SL+L+DE GT G+A+A Sbjct 656 IDRIMTRIGAGDDLARGQSTFMLEMTETSYILHHATAQSLVLMDEIGRGTSTYDGLALAD 715 Query 456 STLEYFS-VKKATVIITTHFSNLKTLAD 482 + + + + + + TH+ L LAD Sbjct 716 AVARHLAHINRCYTLFATHYFELTALAD 743 >RecName: Full=DNA mismatch repair protein MutS [Saccharophagus degradans 2-40] Sequence ID: Q21LB1.1 Length: 887 Range 1: 590 to 804 Score:73.9 bits(180), Expect:4e-12, Method:Compositional matrix adjust., Identities:55/225(24%), Positives:106/225(47%), Gaps:14/225(6%) Query 324 AKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKA 382 +HP+ + + + NDL L +T + +++GPN GGK+ M+ +I L+A+ Sbjct 590 GRHPVVEQVLDDPFVPNDLLL------DTDQRMLIITGPNMGGKSTYMRQTALIVLLAQI 643 Query 383 GLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGF 442 G +V ++ + IF +G + STF + + I A SL+L+DE Sbjct 644 GCYVPASACKLGLVDRIFTRIGSSDDLAGGRSTFMVEMTETANILNNATRNSLVLMDEIG 703 Query 443 VGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLADNDSRFFNGSMEFEPH--KL 499 GT G+++A + +E+ + A + TH+ L L + N ++ H + Sbjct 704 RGTSTYDGLSLAWACVEHLANNLHAFTLFATHYFELTGLPKALAGVQNVHLDATEHNDSI 763 Query 500 LPTYKLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERME 544 + +K+ G +S+ +++A+ G+ +N+I A G R+E Sbjct 764 VFLHKIQPGPASKSFGLQVAKLAGIPSNVIADA----GGHLRRLE 804 >RecName: Full=DNA mismatch repair protein MutS [Acinetobacter baumannii AYE] Sequence ID: B0VAU7.1 Length: 881 >RecName: Full=DNA mismatch repair protein MutS [Acinetobacter baumannii ACICU] Sequence ID: B2HX50.1 Length: 881 >RecName: Full=DNA mismatch repair protein MutS [Acinetobacter baumannii AB307-0294] Sequence ID: B7GW85.1 Length: 881 >RecName: Full=DNA mismatch repair protein MutS [Acinetobacter baumannii AB0057] Sequence ID: B7IBV9.1 Length: 881 Range 1: 552 to 831 Score:73.6 bits(179), Expect:5e-12, Method:Compositional matrix adjust., Identities:75/318(24%), Positives:139/318(43%), Gaps:48/318(15%) Query 274 LVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF-LLE 332 + H ++SS+ + Q D I A + + +PEF + + +HP+ L Sbjct 552 IAHLQMMSSA--IAQIDVIANFAHQARLNNWARPEFTPETGIK----IQGGRHPVVEALS 605 Query 333 NKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAE 392 ND L + + +++GPN GGK+ M+ +I+L+A G +V A+ Sbjct 606 KAPFTPNDTFL------DVQHRMAIITGPNMGGKSTFMRQTALISLLAYCGSYVPARAAK 659 Query 393 IQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVA 452 + + IF +G + STF + + +I A SL+L+DE GT G++ Sbjct 660 LGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLVLMDEVGRGTSTYDGLS 719 Query 453 MARSTLEYFSVK-KATVIITTHFSNLKTLA-----DN---DSRFFNGSMEFEPHKLLPTY 503 +A + + + + K + TH+ L L DN ++ NG+ L+ + Sbjct 720 LAWACVVDLTKRVKCLCLFATHYFELTELGSEPGIDNYHVTAQELNGN-------LILLH 772 Query 504 KLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIEINEELTK 563 K+ G QS+ +++A+ G+ N+I++A+ KR+ I E+ + Sbjct 773 KVQQGPASQSHGLQVAKLAGIPANVIKEAQ-------------------KRLRILEKQQQ 813 Query 564 QNLLTQKLDSEFKSLKNE 581 Q+L T F +L +E Sbjct 814 QHLQTSVQSDLFATLDSE 831 >RecName: Full=DNA mismatch repair protein MutS [Acinetobacter baumannii SDF] Sequence ID: B0VUC9.1 Length: 881 Range 1: 552 to 831 Score:73.6 bits(179), Expect:5e-12, Method:Compositional matrix adjust., Identities:75/318(24%), Positives:139/318(43%), Gaps:48/318(15%) Query 274 LVHEDILSSSEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF-LLE 332 + H ++SS+ + Q D I A + + +PEF + + +HP+ L Sbjct 552 IAHLQMMSSA--IAQIDVIANFAHQARLNNWARPEFTPETGIK----IQGGRHPVVEALS 605 Query 333 NKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAE 392 ND L + + +++GPN GGK+ M+ +I+L+A G +V A+ Sbjct 606 KAPFTPNDTFL------DVQHRMAIITGPNMGGKSTFMRQTALISLLAYCGSYVPARAAK 659 Query 393 IQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVA 452 + + IF +G + STF + + +I A SL+L+DE GT G++ Sbjct 660 LGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLVLMDEVGRGTSTYDGLS 719 Query 453 MARSTLEYFSVK-KATVIITTHFSNLKTLA-----DN---DSRFFNGSMEFEPHKLLPTY 503 +A + + + + K + TH+ L L DN ++ NG+ L+ + Sbjct 720 LAWACVVDLTKRVKCLCLFATHYFELTELGSEPGIDNYHVTAQELNGN-------LILLH 772 Query 504 KLLNGIPGQSYAIELAERMGLNNNIIQKARTYYGSESERMENLLKELQLKRIEINEELTK 563 K+ G QS+ +++A+ G+ N+I++A+ KR+ I E+ + Sbjct 773 KVQQGPASQSHGLQVAKLAGIPANVIKEAQ-------------------KRLRILEKQQQ 813 Query 564 QNLLTQKLDSEFKSLKNE 581 Q+L T F +L +E Sbjct 814 QHLQTSVQSDLFATLDSE 831 >RecName: Full=DNA mismatch repair protein MutS [Polaromonas sp. JS666] Sequence ID: Q127P5.1 Length: 864 Range 1: 551 to 799 Score:72.4 bits(176), Expect:1e-11, Method:Compositional matrix adjust., Identities:66/265(25%), Positives:110/265(41%), Gaps:30/265(11%) Query 283 SEILTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF---LLE--NKKCI 337 + L D + A + + ++ P F+K P + +HP+ L E I Sbjct 551 ARALASLDALCALAERSLTLNWAAPVFVK----EPCIDITQGRHPVVEARLAETGGGSFI 606 Query 338 ANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYE 397 AND L+ K + + V++GPN GGK+ M+ V +I L+A G +V + + + Sbjct 607 ANDCSLSGKHRMQ------VITGPNMGGKSTYMRQVALIVLLASVGSYVPAARCRLGPID 660 Query 398 NIFVELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARST 457 I +G + STF + + +I A SL+L+DE GT G+A+A Sbjct 661 AIHTRIGAADDVANAQSTFMLEMTEAAQILHTATPHSLVLMDEIGRGTSTFDGLALAGGI 720 Query 458 LEYFSVK-KATVIITTHFSNLKTLADNDSRFFN--------GSMEFEPHKLLPTYKLLNG 508 Y K +A + TH+ L N G+ H + P G Sbjct 721 AAYLHNKTQAFTLFATHYFELTEFPAQHHGAINVHVSAVESGANIVFLHHIEP------G 774 Query 509 IPGQSYAIELAERMGLNNNIIQKAR 533 +SY I +A+ G+ + ++ AR Sbjct 775 PASKSYGIAVAKLAGVPSAVVTHAR 799 >RecName: Full=DNA mismatch repair protein MutS [Acinetobacter baylyi ADP1] Sequence ID: Q6FC54.1 Length: 881 Range 1: 629 to 807 Score:72.4 bits(176), Expect:1e-11, Method:Compositional matrix adjust., Identities:49/186(26%), Positives:93/186(50%), Gaps:16/186(8%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ +I+L+A G +V A++ + IF +G + STF Sbjct 629 IITGPNMGGKSTFMRQTALISLLAYCGSYVPAKSAKLGPIDRIFTRIGSADDLSTGKSTF 688 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARS-TLEYFSVKKATVIITTHFS 475 + + +I A SL+L+DE GT G+++A + L+ K + TH+ Sbjct 689 MVEMTETSQILHHATHQSLVLMDEVGRGTSTYDGLSLAWACVLDLTKRIKCLCLFATHYF 748 Query 476 NLKTLA-----DN---DSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNN 527 L L DN ++ NG+ L+ +K+ +G QS+ +++A+ G+ + Sbjct 749 ELTELGSESAIDNYHVTAKEMNGN-------LILLHKVQHGPASQSHGLQVAKLAGIPAS 801 Query 528 IIQKAR 533 +I++A+ Sbjct 802 VIKEAQ 807 >RecName: Full=DNA mismatch repair protein MutS [Teredinibacter turnerae T7901] Sequence ID: C5BMR5.1 Length: 864 Range 1: 575 to 797 Score:71.6 bits(174), Expect:2e-11, Method:Compositional matrix adjust., Identities:53/233(23%), Positives:110/233(47%), Gaps:14/233(6%) Query 305 IKPEFLKPRDLNPRFSLINAKHPLF-LLENKKCIANDLHLAPKSQGETSPYVWVLSGPNA 363 +KPEF + + +HP+ + I NDL L + + + +++GPN Sbjct 575 VKPEFRGEAGIE----IEKGRHPVVEQVLTDPFIPNDLTLNAQQR------MLIITGPNM 624 Query 364 GGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQI 423 GGK+ M+ +I L+A+ G +V + + + IF +G + STF + + Sbjct 625 GGKSTYMRQTALIVLLAQVGSYVPAEACRLGLVDRIFTRIGSSDDLAGGRSTFMVEMTET 684 Query 424 KRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTLAD 482 I A SL+L+DE GT G+++A + +E+ + K K+ + TH+ + L Sbjct 685 ANILNNATSDSLVLMDEIGRGTSTYDGLSLAWACVEHLAEKLKSFTLFATHYFEITALPA 744 Query 483 NDSRFFNGSMEFEPHK--LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKAR 533 N ++ ++ ++ + + G +SY +++A+ G+ ++++A+ Sbjct 745 QLPTVKNVHLDATEYQDNIVFLHNIQAGPASKSYGLQVAKLAGIPGAVLRQAK 797 >RecName: Full=DNA mismatch repair protein MSH6; Short=AtMSH6; AltName: Full=MutS protein homolog 6 [Arabidopsis thaliana] Sequence ID: O04716.2 Length: 1324 Range 1: 1038 to 1263 Score:70.9 bits(172), Expect:4e-11, Method:Compositional matrix adjust., Identities:60/232(26%), Positives:104/232(44%), Gaps:19/232(8%) Query 314 DLNPRFSLINAKHPLFL---LENKKCIANDLHLAPKSQGETSPYVWVLSGPNAGGKTVAM 370 D P S HP+ L + N++ + E + ++ +L+GPN GGK+ + Sbjct 1038 DGVPHLSATGLGHPVLRGDSLGRGSFVPNNVKIG---GAEKASFI-LLTGPNMGGKSTLL 1093 Query 371 KTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLAQIKRISEQA 430 + V + ++A+ G V + E+ + I V +G + + STF L++ + A Sbjct 1094 RQVCLAVILAQIGADVPAETFEVSPVDKICVRMGAKDHIMAGQSTFLTELSETAVMLTSA 1153 Query 431 NELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLK---------TL 480 SL++LDE GT + G A+A S LE+F K + +TH+ L +L Sbjct 1154 TRNSLVVLDELGRGTATSDGQAIAESVLEHFIEKVQCRGFFSTHYHRLSVDYQTNPKVSL 1213 Query 481 ADNDSRFFNGSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKA 532 + G E L Y+L G +SY + +A GL + ++Q+A Sbjct 1214 CHMACQIGEGIGGVEEVTFL--YRLTPGACPKSYGVNVARLAGLPDYVLQRA 1263 >RecName: Full=DNA mismatch repair protein MutS [Methylibium petroleiphilum PM1] Sequence ID: A2SJQ7.1 Length: 870 Range 1: 574 to 803 Score:67.4 bits(163), Expect:5e-10, Method:Compositional matrix adjust., Identities:58/240(24%), Positives:104/240(43%), Gaps:22/240(9%) Query 307 PEFLKPRDLNPRFSLINAKHPLF---LLE--NKKCIANDLHLAPKSQGETSPYVWVLSGP 361 PEF+ P + +HP+ L E I ND L + + + V++GP Sbjct 574 PEFVS----QPCIEIEQGRHPVVEARLAETGGGSFIPNDCRL------DANRRMLVITGP 623 Query 362 NAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTFSGHLA 421 N GGK+ M+ V ++ L+A G +V + + I +G + STF + Sbjct 624 NMGGKSTFMRQVALVVLLAAMGSYVPAAACRLGPVDAIHTRIGAADDLANAQSTFMLEMT 683 Query 422 QIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFSNLKTL 480 + I A E SL+L+DE GT G+A+A + + +A + TH+ L Sbjct 684 EAAAIVHGATEHSLVLMDEIGRGTSTFDGLALAGAIASQLHDRNRAFTLFATHYFELTAF 743 Query 481 ADNDSRFFNGSME-FEPHK-----LLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKART 534 + R N + E H ++ +++ G +SY +++A G+ ++++AR Sbjct 744 PEKHPRALNVHVSAAESHTGHGDDIVFLHEIQPGPASRSYGVQVARLAGMPAPLLRQARA 803 >RecName: Full=DNA mismatch repair protein MutS [Paracidovorax citrulli AAC00-1] Sequence ID: A1TNU7.1 Length: 890 Range 1: 646 to 834 Score:65.9 bits(159), Expect:1e-09, Method:Compositional matrix adjust., Identities:49/190(26%), Positives:85/190(44%), Gaps:5/190(2%) Query 357 VLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIFVELGDRQNREEDLSTF 416 +++GPN GGK+ M+ V +I L+A G V + + I +G + STF Sbjct 646 IITGPNMGGKSTYMRQVALIVLLASMGSHVPAAHCRLGPIDAIHTRIGAADDLANAQSTF 705 Query 417 SGHLAQIKRISEQANELSLILLDEGFVGTDPAIGVAMARSTLEYFSVK-KATVIITTHFS 475 + + +I A SL+L+DE GT G+A+A + + +A + TH+ Sbjct 706 MMEMTEAAQILHAATPHSLVLMDEIGRGTSTFDGLALASGIATHLHDRTRAFTLFATHYF 765 Query 476 NLKTLADNDSRFFN---GSMEFEPHKLLPTYKLLNGIPGQSYAIELAERMGLNNNIIQKA 532 L LA + N G+ E ++ +++ G +SY I +A G+ ++ A Sbjct 766 ELTELAARHAHAVNVHVGATE-SGSDIVFLHEIQPGPASRSYGIHVARLAGVPAPVLNHA 824 Query 533 RTYYGSESER 542 R + ER Sbjct 825 RHALSALEER 834 >RecName: Full=DNA mismatch repair protein MutS [Variovorax paradoxus S110] Sequence ID: C5CTL8.1 Length: 885 Range 1: 571 to 816 Score:63.9 bits(154), Expect:5e-09, Method:Compositional matrix adjust., Identities:61/256(24%), Positives:102/256(39%), Gaps:18/256(7%) Query 286 LTQFDNIIARTKFAGVIHGIKPEFLKPRDLNPRFSLINAKHPLF---LLENKKC--IAND 340 + D + A + + +H P F+ +P + +HP+ L E IAND Sbjct 571 IATLDALCALAERSHTLHWRAPSFVS----HPCIEIQQGRHPVVEARLAEKSSGGFIAND 626 Query 341 LHLAPKSQGETSPYVWVLSGPNAGGKTVAMKTVGIIALMAKAGLFVSCDKAEIQDYENIF 400 L P+ + + V++GPN GGK+ M+ V II L+A G V + + I Sbjct 627 TQLGPQQRMQ------VITGPNMGGKSTYMRQVAIIVLLASIGSHVPAAACRLGPIDAIH 680 Query 401 VELGDRQNREEDLSTFSGHLAQIKRISEQANELSLILLDEGFVGTDP-AIGVAMARSTLE 459 +G + STF + + +I A SL+L+DE GT A + Sbjct 681 TRIGAADDLANAQSTFMLEMTEAAQILHSATAQSLVLMDEIGRGTSTFDGLALAAGIAAQ 740 Query 460 YFSVKKATVIITTHFSNLKTLADNDSRFFNG--SMEFEPHKLLPTYKLLNGIPGQSYAIE 517 KA + TH+ L N S ++ +++ G +SY I+ Sbjct 741 LHDRSKAFTLFATHYFELTEFPATHHCAVNMHVSATEAGRDIVFLHEMQPGPASKSYGIQ 800 Query 518 LAERMGLNNNIIQKAR 533 +A G+ ++ AR Sbjct 801 VARLAGMPAAVVNHAR 816