FastQCFastQC Report
Вт 21 ноя 2017
chr4.2.fastq

Summary

[OK]Basic Statistics

MeasureValue
Filenamechr4.2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2270
Sequences flagged as poor quality0
Sequence length39-51
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGAACATCAAAGCATGATGGTGAAACGGTGACCAGGACACCTCGGTCTGG391.7180616740088104No Hit
CTCCGAGTAGCCGTCAGCAACGCTGAACACTGTGACCACCTTGCTGGCGTC271.1894273127753305No Hit
CTGTAATCTCGCCCACAGAAGAGCCACTATCCCAGAGGAAGACTGCTCCAA261.145374449339207No Hit
GTGGCCTTTCCCAGCGAAGGAGTCGTTCTCCCCCGTCTCTGAATCCCAGTA210.9251101321585903No Hit
GCTCGCTTTATTTTTCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAG200.881057268722467No Hit
GGCCTTTCCCAGCGAAGGAGTCGTTCTCCCCCGTCTCTGAATCCCAGTAAT180.7929515418502203No Hit
CTCAAAGAATGCCGCGCAGTTATCATCGCTTCCCGTGGCCAGCCGGTATGG170.7488986784140969No Hit
GGGGAACATCAAAGCATGATGGTGAAACGGTGACCAGGACACCTCGGTCTG160.7048458149779736No Hit
GTCCAGTTTCACAACTCCTTGTCCGCTGTAGTCCCGCAGCATGAGGCTGG140.6167400881057269No Hit
CTCGCTTTATTTTTCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGAAGA130.5726872246696035No Hit
CAGGGGAACATCAAAGCATGATGGTGAAACGGTGACCAGGACACCTCGGTC130.5726872246696035No Hit
GGACACGGTGCCGTCAACGCACTAGTTTGTAAACACTGACAGGCAACAGTT120.5286343612334802No Hit
CTAAAAACTTGGACACGGTGCCGTCAACGCACTAGTTTGTAAACACTGACA110.4845814977973568No Hit
CTGGGGACCAGGCCAGGCAGACGATTTTTGCATGGTGTCCATAAAAAACAT110.4845814977973568No Hit
CTTAGGGTCGCCGCCGATGATCTTGGAGACGCCCCTCTCCACCTGCGGGAG110.4845814977973568No Hit
GTGGGTTTTAGTTATGCTCCACACATTGTTTAGGTGCTCGCTTTATTTTTC100.4405286343612335No Hit
GTCCAGTTTCACAACTCCTTGTCCGCTGTAGTCCCGCAGCATGAGGCTGGT100.4405286343612335No Hit
CGCATTCTCAAGGTTTGGTTGGGCTGTGGGTTTTAGTTATGCTCCACACAT100.4405286343612335No Hit
GTGCTCGCTTTATTTTTCATGTGCAAACTGTTACTGTCTAAAGCTTTCAGA90.39647577092511016No Hit
GGAACATCAAAGCATGATGGTGAAACGGTGACCAGGACACCTCGGTCTGGC90.39647577092511016No Hit
GTGCTTTATACTTACTTTTAATTTCTGCACTGAAAAAGAAAAGGAAGGTAA90.39647577092511016No Hit
CACAGAAGAGCCACTATCCCAGAGGAAGACTGCTCCAAACTTCTCCCTTCC90.39647577092511016No Hit
CTTAAATTAACCTTTGCTCTTGAGAGCAGAAGAGGGAAAGACAGGGGAACA90.39647577092511016No Hit
CCCCAGTCTTCCCGTCATAGATGTATATCTGGCCGTCAGCACTGGCTGTGG80.3524229074889868No Hit
CCTCTTCTCACTAGTACAGAAATGTTCTGCAGGCAGGAACATGAGCCCCCC80.3524229074889868No Hit
CTTTATACTTACTTTTAATTTCTGCACTGAAAAAGAAAAGGAAGGTAAAAA70.30837004405286345No Hit
GGGGTCCCTCAAAGAATGCCGCGCAGTTATCATCGCTTCCCGTGGCCAGCC70.30837004405286345No Hit
GCCTTTCCCAGCGAAGGAGTCGTTCTCCCCCGTCTCTGAATCCCAGTAATT70.30837004405286345No Hit
GTCGATGTTCCTTAGGATGACGCACTTTCCATTGGTGTACAGAAAATTGTT70.30837004405286345No Hit
CCACGCTGTTGATGACTTTGTTGTGTCCTGTAATCTCGCCCACAGAAGAGC70.30837004405286345No Hit
CGGTGCTTTATACTTACTTTTAATTTCTGCACTGAAAAAGAAAAGGAAGGT70.30837004405286345No Hit
GGTCCCTCAAAGAATGCCGCGCAGTTATCATCGCTTCCCGTGGCCAGCCGG70.30837004405286345No Hit
GCTCCTTCTGCGTGGTATCCCAGATCCTCAGCTTCCCAGACACATCTCCGG70.30837004405286345No Hit
CTTCTCACTAGTACAGAAATGTTCTGCAGGCAGGAACATGAGCCCCCCGGC70.30837004405286345No Hit
CTCTTCTCACTAGTACAGAAATGTTCTGCAGGCAGGAACATGAGCCCCCCG70.30837004405286345No Hit
CAAAGAATGCCGCGCAGTTATCATCGCTTCCCGTGGCCAGCCGGTATGGCC60.2643171806167401No Hit
GTCGTGACCAGCGTGTGCTCGTCCAGCCAGGCCAGGCTGCTGACATGGTGC60.2643171806167401No Hit
CCCAGTCTTCCCGTCATAGATGTATATCTGGCCGTCAGCACTGGCTGTGGC60.2643171806167401No Hit
GTGGGGTGGGGGCATGGGGGCGCGTCACAGAAATAGAGAAATGACATGTTC60.2643171806167401No Hit
CTTTGATCTTCCCAGCGAAAGGCTGGTACTCATACTTCAACAGGTGCTCCT60.2643171806167401No Hit
GTCCTGTAATCTCGCCCACAGAAGAGCCACTATCCCAGAGGAAGACTGCTC60.2643171806167401No Hit
GTTGGGCTGTGGGTTTTAGTTATGCTCCACACATTGTTTAGGTGCTCGCTT60.2643171806167401No Hit
CGTGGCTCCCAGAGTAAATGTAGGACTTGCCGCCGTTTTTATGCACCGTCA60.2643171806167401No Hit
GGGGGTCCCTCAAAGAATGCCGCGCAGTTATCATCGCTTCCCGTGGCCAGC60.2643171806167401No Hit
GTCCGTCGTGGCTCCCAGAGTAAATGTAGGACTTGCCGCCGTTTTTATGCA60.2643171806167401No Hit
CACAATTCCATTCTTAAAATCAAGCACAAAATCTGACAATGAAACATATCC60.2643171806167401No Hit
GTCCACGCTGTTGATGACTTTGTTGTGTCCTGTAATCTCGCCCACAGAAGA50.22026431718061676No Hit
GTCCATGCCACCGGAGGCAAAGTGTTCATTGTCTGGGGACCAGGCCAGGCA50.22026431718061676No Hit
CACGGTGCTTTATACTTACTTTTAATTTCTGCACTGAAAAAGAAAAGGAAG50.22026431718061676No Hit
GTTCCGCTGCAGTTAAACTCTAGTCCCTGATTCGGTCCATCCAGAGGCGGG50.22026431718061676No Hit
AAAAAACATTGTTCTCCGAGTAGCCGTCAGCAACGCTGAACACTGTGACCA50.22026431718061676No Hit
GTGTAGATGTCAGCAAGGGCTGGGTTGTCGATGTTCCTTAGGATGACGCAC50.22026431718061676No Hit
GAGGGATTGTTCTCAGCCAACATTTACCAGTGATTCCGACACACGCAAAAA50.22026431718061676No Hit
AGGGGAACATCAAAGCATGATGGTGAAACGGTGACCAGGACACCTCGGTCT50.22026431718061676No Hit
CTCTGGTTTCCGGGTCACTCAGGGTCCAAACATACACCATCATGTCCATGC50.22026431718061676No Hit
CCCTCTTCTCACTAGTACAGAAATGTTCTGCAGGCAGGAACATGAGCCCCC40.1762114537444934No Hit
CCTTGATGACGTGCAGGGGCTTGCTGGGGTTGTTTCTGTCCAGATAGTTGA40.1762114537444934No Hit
GTGAACATCAAAGCATGATGGTGAAACGGTGACCAGGACACCTCGGTCTGG40.1762114537444934No Hit
GGGAGGGATTGTTCTCAGCCAACATTTACCAGTGATTCCGACACACGCAAA40.1762114537444934No Hit
CAGGGGTTGTGTGTCCCCATCTGATCTGGAGGTGGCGCTCTGAAGGCAGCC40.1762114537444934No Hit
TGTAGATGTCAGCAAGGGCTGGGTTGTCGATGTTCCTTAGGATGACGCACT40.1762114537444934No Hit
GATTGTTCTCAGCCAACATTTACCAGTGATTCCGACACACGCAAAAACACT40.1762114537444934No Hit
CAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGAGG40.1762114537444934No Hit
CCCTCAAAGAATGCCGCGCAGTTATCATCGCTTCCCGTGGCCAGCCGGTAT40.1762114537444934No Hit
CTCCCTTCCTTCCCCGACCACGGCGATCCTCTTACTGTCTTCAGTCCAAGC40.1762114537444934No Hit
GTGTGGCCTTTCCCAGCGAAGGAGTCGTTCTCCCCCGTCTCTGAATCCCAG40.1762114537444934No Hit
CACGGTGCCGTCAACGCACTAGTTTGTAAACACTGACAGGCAACAGTTAAG40.1762114537444934No Hit
CAGTTTCACAACTCCTTGTCCGCTGTAGTCCCGCAGCATGAGGCTGGTGTA40.1762114537444934No Hit
CTTCATCTTTGTCCTTAAATTAACCTTTGCTCTTGAGAGCAGAAGAGGGAA40.1762114537444934No Hit
ATAAAAAACATTGTTCTCCGAGTAGCCGTCAGCAACGCTGAACACTGTGAC40.1762114537444934No Hit
GGGGTATGTATGTTGAGTCTGAGATGTCAATGAGACATGTTAGATCTTCCA40.1762114537444934No Hit
CTGGCTAACAAGGGTTCTAAAAACTTGGACACGGTGCCGTCAACGCACTAG40.1762114537444934No Hit
CCCACATATAGTTTTAAAATCTTTTACTATAAAAGGCTCAATTAATTCCTG40.1762114537444934No Hit
CCTTAGGGTCGCCGCCGATGATCTTGGAGACGCCCCTCTCCACCTGCGGG40.1762114537444934No Hit
AGGGATTGTTCTCAGCCAACATTTACCAGTGATTCCGACACACGCAAAAAC40.1762114537444934No Hit
CCGACCACGGCGATCCTCTTACTGTCTTCAGTCCAAGCAATGTCTTTGATC40.1762114537444934No Hit
GCCGTCAGCACTGGCTGTGGCAAATCTGTTCCCATCAGGAGAGAATCGCAC40.1762114537444934No Hit
CACGACAAGAAGGGACTGATCAGGTCGGAGCCGCCCATGGCTTTTCCTCAG40.1762114537444934No Hit
CTCAGCCAACATTTACCAGTGATTCCGACACACGCAAAAACACTCCCAATC40.1762114537444934No Hit
GTGCTCCTTCTGCGTGGTATCCCAGATCCTCAGCTTCCCAGACACATCTCC40.1762114537444934No Hit
CCACAATTCCATTCTTAAAATCAAGCACAAAATCTGACAATGAAACATATC40.1762114537444934No Hit
GTGACTTCATCTTTGTCCTTAAATTAACCTTTGCTCTTGAGAGCAGAAGAG40.1762114537444934No Hit
GGGGTTGTTTCTGTCCAGATAGTTGATGTACCCGGACAGGGAGACACTGAG40.1762114537444934No Hit
CCCAGAGTAAATGTAGGACTTGCCGCCGTTTTTATGCACCGTCAGACACTG40.1762114537444934No Hit
GTCATAGATGTATATCTGGCCGTCAGCACTGGCTGTGGCAAATCTGTTCCC40.1762114537444934No Hit
GCCGGGGATGGAAAATTCTATTCCGGGGACACCCCTCTACTAAGGTGACTA40.1762114537444934No Hit
GGGGTATCTGAAGTGTGGGTGCACCACACAGGGATTGGGATGAGGCAGAAA40.1762114537444934No Hit
CCCATCTGATCTGGAGGTGGCGCTCTGAAGGCAGCCACAAGGTGTGAGTCA30.13215859030837004No Hit
CTTCCTTCCCCGACCACGGCGATCCTCTTACTGTCTTCAGTCCAAGCAATG30.13215859030837004No Hit
GGTGGGGCTCCTCAGTAGGTGATTGTCCACTCCTTGACAGAGGCATCATGG30.13215859030837004No Hit
CTCCAGCCAACAACCCAAACTTGCTTGCCTCAGGTAAGCCCTCCTCAGGGT30.13215859030837004No Hit
CTCGCCCACAGAAGAGCCACTATCCCAGAGGAAGACTGCTCCAAACTTCTC30.13215859030837004No Hit
CCCGTCTCTGAATCCCAGTAATTAATGTGTCCGTCGTGGCTCCCAGAGTAA30.13215859030837004No Hit
CCGGCTTTGCTGAACTGCAATGCATATTCCCTCTTCTCACTAGTACAGAAA30.13215859030837004No Hit
GGCAGGAACATGAGCCCCCCGGCTCATTCACCTGTACAACCTCCCCTGACA30.13215859030837004No Hit
GGGGCTTGCTGGGGTTGTTTCTGTCCAGATAGTTGATGTACCCGGACAGGG30.13215859030837004No Hit
GTCCCTCAAAGAATGCCGCGCAGTTATCATCGCTTCCCGTGGCCAGCCGG30.13215859030837004No Hit
GTCAGCAAGGGCTGGGTTGTCGATGTTCCTTAGGATGACGCACTTTCCATT30.13215859030837004No Hit
CCCAATTGCCACCGTGTCCCCGCCGGGGTGCACTGCCACAACTTCGGGCTC30.13215859030837004No Hit
GACCAGGACACCTCGGTCTGGCTAACAAGGGTTCTAAAAACTTGGACACGG30.13215859030837004No Hit
GCCAAATCAGAACGTGCACTCGGCAAGAGGCCAAGAGACTTGTGTGCAGGC30.13215859030837004No Hit
GGCTCTCCTACTTCAAATTCATAGTCAAAACCCTCAGATGCTGCTGGCCCC30.13215859030837004No Hit
GTTTGGTTGGGCTGTGGGTTTTAGTTATGCTCCACACATTGTTTAGGTGCT30.13215859030837004No Hit
CCCTTGTATGCCTATGGCATCAATCAAAACATACATCTTTGTGCCAGCCGC30.13215859030837004No Hit
CCAACATTTACCAGTGATTCCGACACACGCAAAAACACTCCCAATCACGGT30.13215859030837004No Hit
CCAGTTTCACAACTCCTTGTCCGCTGTAGTCCCGCAGCATGAGGCTGGTGT30.13215859030837004No Hit
CGGGGATGGAAAATTCTATTCCGGGGACACCCCTCTACTAAGGTGACTACA30.13215859030837004No Hit
CCGGAATGAACAGAAGGAATGGAGAAGCAGTCAAGCTTCCAGCTCTCCACA30.13215859030837004No Hit
GTAGATGTCAGCAAGGGCTGGGTTGTCGATGTTCCTTAGGATGACGCACTT30.13215859030837004No Hit
CAGCAAGGGCTGGGTTGTCGATGTTCCTTAGGATGACGCACTTTCCATTGG30.13215859030837004No Hit
GTGGAACATCAAAGCATGATGGTGAAACGGTGACCAGGACACCTCGGTCTG30.13215859030837004No Hit
GTGCTTTGGAGGCTACTGCCTCTGGAATGTTTCGCATTCTCAAGGTTTGGT30.13215859030837004No Hit
GGTTGTTTCTGTCCAGATAGTTGATGTACCCGGACAGGGAGACACTGAGCA30.13215859030837004No Hit
CGCTGCAGTTAAACTCTAGTCCCTGATTCGGTCCATCCAGAGGCGGGGGGG30.13215859030837004No Hit
TGTCGATGTTCCTTAGGATGACGCACTTTCCATTGGTGTACAGAAAATTGT30.13215859030837004No Hit
GCATTCTCAAGGTTTGGTTGGGCTGTGGGTTTTAGTTATGCTCCACACATT30.13215859030837004No Hit
GGCTAACAAGGGTTCTAAAAACTTGGACACGGTGCCGTCAACGCACTAGTT30.13215859030837004No Hit
GTTCGTGTGGCCTTTCCCAGCGAAGGAGTCGTTCTCCCCCGTCTCTGAATC30.13215859030837004No Hit
GCCAAATCTTGGGGCTTTAAATGAAGAGACTTTTGCTGGCAAGCAGGGCTT30.13215859030837004No Hit
CCTTCCTTCCCCGACCACGGCGATCCTCTTACTGTCTTCAGTCCAAGCAAT30.13215859030837004No Hit
GCTCTGTGTAGATGTCAGCAAGGGCTGGGTTGTCGATGTTCCTTAGGATGA30.13215859030837004No Hit
CCCCAATTGCCACCGTGTCCCCGCCGGGGTGCACTGCCACAACTTCGGGCT30.13215859030837004No Hit
CCACGGTCATCCTGGACACCTGGTTCGTGTGGCCTTTCCCAGCGAAGGAGT30.13215859030837004No Hit
CTGACAGATAGTGAGAGCCGCGGCGGGGCCAGGGGCTCTGTGTGCTTTGG30.13215859030837004No Hit
CTCAGGCTAATCTCTTAAAGCGCTCAAAGTGTTTTCACAAGTGCAAGGGGA30.13215859030837004No Hit
GTTGTGTGTCCCCATCTGATCTGGAGGTGGCGCTCTGAAGGCAGCCACAAG30.13215859030837004No Hit
CTTGGATCTTGACTCTGGTTTCCGGGTCACTCAGGGTCCAAACATACACCA30.13215859030837004No Hit
CCTCATCCTTCAGCGTGGTGCCCAGGATGGAATACAGGCGGACGTTGCCG30.13215859030837004No Hit
CTTCCTTACGGTTGGTCTCAATGTTAGTGTGATTCTTTAATACAGAGAATA30.13215859030837004No Hit
CTAACAAGGGTTCTAAAAACTTGGACACGGTGCCGTCAACGCACTAGTTTG30.13215859030837004No Hit
CGGCAATCTACACTGAGCTGAGCTTTCCTTGTTCTCATGCAGTAAGACCTC30.13215859030837004No Hit
CTTTGGCTGAACGTCCAGTTTCACAACTCCTTGTCCGCTGTAGTCCCGCAG30.13215859030837004No Hit
CTGGCCGTCAGCACTGGCTGTGGCAAATCTGTTCCCATCAGGAGAGAATCG30.13215859030837004No Hit
GGCGGGCACATCAGCTCTCTGGGCTCTGGTTTTCCTATTTTTAAAACAAGG30.13215859030837004No Hit
AGCAAGGGCTGGGTTGTCGATGTTCCTTAGGATGACGCACTTTCCATTGGT30.13215859030837004No Hit
GTTCCTTAGGATGACGCACTTTCCATTGGTGTACAGAAAATTGTTGCCCTT30.13215859030837004No Hit
GTTTCGCATTCTCAAGGTTTGGTTGGGCTGTGGGTTTTAGTTATGCTCCAC30.13215859030837004No Hit
CCGGACAGGGAGACACTGAGCAGGTGGTCCTTCTGCCATAGGCAGCCCAGC30.13215859030837004No Hit
GGGCTCCTCAGTAGGTGATTGTCCACTCCTTGACAGAGGCATCATGGGAGG30.13215859030837004No Hit
GTTCTAAAAACTTGGACACGGTGCCGTCAACGCACTAGTTTGTAAACACTG30.13215859030837004No Hit
GCTGAACGTCCAGTTTCACAACTCCTTGTCCGCTGTAGTCCCGCAGCATGA30.13215859030837004No Hit
TCCAGTTTCACAACTCCTTGTCCGCTGTAGTCCCGCAGCATGAGGCTGGTG30.13215859030837004No Hit
CTCACTAGTACAGAAATGTTCTGCAGGCAGGAACATGAGCCCCCCGGCTCA30.13215859030837004No Hit
GTTGTTTCTGTCCAGATAGTTGATGTACCCGGACAGGGAGACACTGAGCAG30.13215859030837004No Hit
CTCAAGGTTTGGTTGGGCTGTGGGTTTTAGTTATGCTCCACACATTGTTTA30.13215859030837004No Hit
CAGGAGAGAATCGCACACAGTTGACAAAGCGGCTGTGGTCGCCAACTGTGA30.13215859030837004No Hit
CTGCACTGAAAAAGAAAAGGAAGGTAAAAACAATGACAGATTAGTTTACAG30.13215859030837004No Hit
GTCCCGCAGCATGAGGCTGGTGTACCGCACGGTGTCGTCCATGCTGCAGCT30.13215859030837004No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers