******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.5.1 (Release date: Sun Jan 29 10:33:12 2023 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= train.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ MNBBKBOB_00002 1.0000 100 MNBBKBOB_00030 1.0000 100 MNBBKBOB_00036 1.0000 100 MNBBKBOB_00045 1.0000 100 MNBBKBOB_00049 1.0000 100 MNBBKBOB_00050 1.0000 100 MNBBKBOB_00054 1.0000 100 MNBBKBOB_00059 1.0000 100 MNBBKBOB_00060 1.0000 100 MNBBKBOB_00062 1.0000 100 MNBBKBOB_00063 1.0000 100 MNBBKBOB_00076 1.0000 100 MNBBKBOB_00087 1.0000 100 MNBBKBOB_00092 1.0000 100 MNBBKBOB_00113 1.0000 100 MNBBKBOB_00117 1.0000 100 MNBBKBOB_00130 1.0000 100 MNBBKBOB_00133 1.0000 100 MNBBKBOB_00148 1.0000 100 MNBBKBOB_00157 1.0000 100 MNBBKBOB_00173 1.0000 100 MNBBKBOB_00180 1.0000 100 MNBBKBOB_00197 1.0000 100 MNBBKBOB_00214 1.0000 100 MNBBKBOB_00248 1.0000 100 MNBBKBOB_00251 1.0000 100 MNBBKBOB_00258 1.0000 100 MNBBKBOB_00292 1.0000 100 MNBBKBOB_00294 1.0000 100 MNBBKBOB_00322 1.0000 100 MNBBKBOB_00349 1.0000 100 MNBBKBOB_00351 1.0000 100 MNBBKBOB_00399 1.0000 100 MNBBKBOB_00468 1.0000 100 MNBBKBOB_00489 1.0000 100 MNBBKBOB_00497 1.0000 100 MNBBKBOB_00499 1.0000 100 MNBBKBOB_00510 1.0000 100 MNBBKBOB_00520 1.0000 100 MNBBKBOB_00619 1.0000 100 MNBBKBOB_00671 1.0000 100 MNBBKBOB_00674 1.0000 100 MNBBKBOB_00680 1.0000 100 MNBBKBOB_00681 1.0000 100 MNBBKBOB_00682 1.0000 100 MNBBKBOB_00691 1.0000 100 MNBBKBOB_00692 1.0000 100 MNBBKBOB_00693 1.0000 100 MNBBKBOB_00694 1.0000 100 MNBBKBOB_00698 1.0000 100 MNBBKBOB_00701 1.0000 100 MNBBKBOB_00708 1.0000 100 MNBBKBOB_00709 1.0000 100 MNBBKBOB_00713 1.0000 100 MNBBKBOB_00716 1.0000 100 MNBBKBOB_00724 1.0000 100 MNBBKBOB_00725 1.0000 100 MNBBKBOB_00726 1.0000 100 MNBBKBOB_00727 1.0000 100 MNBBKBOB_00733 1.0000 100 MNBBKBOB_00742 1.0000 100 MNBBKBOB_00743 1.0000 100 MNBBKBOB_00744 1.0000 100 MNBBKBOB_00745 1.0000 100 MNBBKBOB_00746 1.0000 100 MNBBKBOB_00747 1.0000 100 MNBBKBOB_00748 1.0000 100 MNBBKBOB_00749 1.0000 100 MNBBKBOB_00750 1.0000 100 MNBBKBOB_00751 1.0000 100 MNBBKBOB_00752 1.0000 100 MNBBKBOB_00756 1.0000 100 MNBBKBOB_00757 1.0000 100 MNBBKBOB_00758 1.0000 100 MNBBKBOB_00759 1.0000 100 MNBBKBOB_00760 1.0000 100 MNBBKBOB_00761 1.0000 100 MNBBKBOB_00762 1.0000 100 MNBBKBOB_00763 1.0000 100 MNBBKBOB_00764 1.0000 100 MNBBKBOB_00765 1.0000 100 MNBBKBOB_00772 1.0000 100 MNBBKBOB_00777 1.0000 100 MNBBKBOB_00778 1.0000 100 MNBBKBOB_00779 1.0000 100 MNBBKBOB_00812 1.0000 100 MNBBKBOB_00839 1.0000 100 MNBBKBOB_00849 1.0000 100 MNBBKBOB_00870 1.0000 100 MNBBKBOB_00875 1.0000 100 MNBBKBOB_00931 1.0000 100 MNBBKBOB_01050 1.0000 100 MNBBKBOB_01071 1.0000 100 MNBBKBOB_01076 1.0000 100 MNBBKBOB_01077 1.0000 100 MNBBKBOB_01105 1.0000 100 MNBBKBOB_01110 1.0000 100 MNBBKBOB_01144 1.0000 100 MNBBKBOB_01176 1.0000 100 MNBBKBOB_01195 1.0000 100 MNBBKBOB_01220 1.0000 100 MNBBKBOB_01238 1.0000 100 MNBBKBOB_01248 1.0000 100 MNBBKBOB_01261 1.0000 100 MNBBKBOB_01292 1.0000 100 MNBBKBOB_01294 1.0000 100 MNBBKBOB_01319 1.0000 100 MNBBKBOB_01328 1.0000 100 MNBBKBOB_01340 1.0000 100 MNBBKBOB_01360 1.0000 100 MNBBKBOB_01373 1.0000 100 MNBBKBOB_01374 1.0000 100 MNBBKBOB_01377 1.0000 100 MNBBKBOB_01380 1.0000 100 MNBBKBOB_01381 1.0000 100 MNBBKBOB_01382 1.0000 100 MNBBKBOB_01383 1.0000 100 MNBBKBOB_01384 1.0000 100 MNBBKBOB_01385 1.0000 100 MNBBKBOB_01386 1.0000 100 MNBBKBOB_01387 1.0000 100 MNBBKBOB_01470 1.0000 100 MNBBKBOB_01484 1.0000 100 MNBBKBOB_01543 1.0000 100 MNBBKBOB_01558 1.0000 100 MNBBKBOB_01590 1.0000 100 MNBBKBOB_01621 1.0000 100 MNBBKBOB_01624 1.0000 100 MNBBKBOB_01634 1.0000 100 MNBBKBOB_01644 1.0000 100 MNBBKBOB_01648 1.0000 100 MNBBKBOB_01665 1.0000 100 MNBBKBOB_01717 1.0000 100 MNBBKBOB_01718 1.0000 100 MNBBKBOB_01731 1.0000 100 MNBBKBOB_01732 1.0000 100 MNBBKBOB_01733 1.0000 100 MNBBKBOB_01775 1.0000 100 MNBBKBOB_01803 1.0000 100 MNBBKBOB_01812 1.0000 100 MNBBKBOB_01820 1.0000 100 MNBBKBOB_01872 1.0000 100 MNBBKBOB_01926 1.0000 100 MNBBKBOB_01944 1.0000 100 MNBBKBOB_02031 1.0000 100 MNBBKBOB_02032 1.0000 100 MNBBKBOB_02033 1.0000 100 MNBBKBOB_02063 1.0000 100 MNBBKBOB_02068 1.0000 100 MNBBKBOB_02094 1.0000 100 MNBBKBOB_02106 1.0000 100 MNBBKBOB_02122 1.0000 100 MNBBKBOB_02134 1.0000 100 MNBBKBOB_02147 1.0000 100 MNBBKBOB_02168 1.0000 100 MNBBKBOB_02169 1.0000 100 MNBBKBOB_02170 1.0000 100 MNBBKBOB_02171 1.0000 100 MNBBKBOB_02182 1.0000 100 MNBBKBOB_02208 1.0000 100 MNBBKBOB_02209 1.0000 100 MNBBKBOB_02247 1.0000 100 MNBBKBOB_02311 1.0000 100 MNBBKBOB_02374 1.0000 100 MNBBKBOB_02380 1.0000 100 MNBBKBOB_02405 1.0000 100 MNBBKBOB_02453 1.0000 100 MNBBKBOB_02456 1.0000 100 MNBBKBOB_02490 1.0000 100 MNBBKBOB_02506 1.0000 100 MNBBKBOB_02507 1.0000 100 MNBBKBOB_02511 1.0000 100 MNBBKBOB_02512 1.0000 100 MNBBKBOB_02515 1.0000 100 MNBBKBOB_02544 1.0000 100 MNBBKBOB_02545 1.0000 100 MNBBKBOB_02575 1.0000 100 MNBBKBOB_02576 1.0000 100 MNBBKBOB_02639 1.0000 100 MNBBKBOB_02662 1.0000 100 MNBBKBOB_02669 1.0000 100 MNBBKBOB_02670 1.0000 100 MNBBKBOB_02681 1.0000 100 MNBBKBOB_02728 1.0000 100 MNBBKBOB_02757 1.0000 100 MNBBKBOB_02760 1.0000 100 MNBBKBOB_02779 1.0000 100 MNBBKBOB_02781 1.0000 100 MNBBKBOB_02843 1.0000 100 MNBBKBOB_02844 1.0000 100 MNBBKBOB_02845 1.0000 100 MNBBKBOB_02851 1.0000 100 MNBBKBOB_02852 1.0000 100 MNBBKBOB_02859 1.0000 100 MNBBKBOB_02861 1.0000 100 MNBBKBOB_02884 1.0000 100 MNBBKBOB_02896 1.0000 100 MNBBKBOB_02917 1.0000 100 MNBBKBOB_02923 1.0000 100 MNBBKBOB_02926 1.0000 100 MNBBKBOB_02979 1.0000 100 MNBBKBOB_02980 1.0000 100 MNBBKBOB_03007 1.0000 100 MNBBKBOB_03028 1.0000 100 MNBBKBOB_03030 1.0000 100 MNBBKBOB_03031 1.0000 100 MNBBKBOB_03046 1.0000 100 MNBBKBOB_03051 1.0000 100 MNBBKBOB_03054 1.0000 100 MNBBKBOB_03071 1.0000 100 MNBBKBOB_03119 1.0000 100 MNBBKBOB_03133 1.0000 100 MNBBKBOB_03201 1.0000 100 MNBBKBOB_03206 1.0000 100 MNBBKBOB_03207 1.0000 100 MNBBKBOB_03209 1.0000 100 MNBBKBOB_03211 1.0000 100 MNBBKBOB_03232 1.0000 100 MNBBKBOB_03248 1.0000 100 MNBBKBOB_03279 1.0000 100 MNBBKBOB_03316 1.0000 100 MNBBKBOB_03323 1.0000 100 MNBBKBOB_03329 1.0000 100 MNBBKBOB_03339 1.0000 100 MNBBKBOB_03373 1.0000 100 MNBBKBOB_03392 1.0000 100 MNBBKBOB_03419 1.0000 100 MNBBKBOB_03435 1.0000 100 MNBBKBOB_03438 1.0000 100 MNBBKBOB_03457 1.0000 100 MNBBKBOB_03462 1.0000 100 MNBBKBOB_03466 1.0000 100 MNBBKBOB_03469 1.0000 100 MNBBKBOB_03502 1.0000 100 MNBBKBOB_03509 1.0000 100 MNBBKBOB_03546 1.0000 100 MNBBKBOB_03570 1.0000 100 MNBBKBOB_03573 1.0000 100 MNBBKBOB_03586 1.0000 100 MNBBKBOB_03595 1.0000 100 MNBBKBOB_03627 1.0000 100 MNBBKBOB_03628 1.0000 100 MNBBKBOB_03641 1.0000 100 MNBBKBOB_03642 1.0000 100 MNBBKBOB_03643 1.0000 100 MNBBKBOB_03644 1.0000 100 MNBBKBOB_03645 1.0000 100 MNBBKBOB_03646 1.0000 100 MNBBKBOB_03667 1.0000 100 MNBBKBOB_03671 1.0000 100 MNBBKBOB_03742 1.0000 100 MNBBKBOB_03759 1.0000 100 MNBBKBOB_03760 1.0000 100 MNBBKBOB_03768 1.0000 100 MNBBKBOB_03784 1.0000 100 MNBBKBOB_03826 1.0000 100 MNBBKBOB_03859 1.0000 100 MNBBKBOB_03896 1.0000 100 MNBBKBOB_03906 1.0000 100 MNBBKBOB_03907 1.0000 100 MNBBKBOB_03932 1.0000 100 MNBBKBOB_03982 1.0000 100 MNBBKBOB_04025 1.0000 100 MNBBKBOB_04028 1.0000 100 MNBBKBOB_04036 1.0000 100 MNBBKBOB_04055 1.0000 100 MNBBKBOB_04110 1.0000 100 MNBBKBOB_04114 1.0000 100 MNBBKBOB_04120 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme train.fasta -dna -nmotifs 3 -minw 6 model: mod= zoops nmotifs= 3 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 6 maxw= 50 nsites: minsites= 2 maxsites= 269 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 26900 N= 269 sample: seed= 0 hsfrac= 0 searchsize= 26900 norand= no csites= 1000 Letter frequencies in dataset: A 0.201 C 0.304 G 0.304 T 0.191 Background letter frequencies (from file dataset with add-one prior applied): A 0.201 C 0.304 G 0.304 T 0.191 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CRRCGACGAKGBVGWGSSMAGCGATGAGGAGVAGMDSSGC MEME-1 width = 40 sites = 7 llr = 217 E-value = 2.5e-009 ******************************************************************************** -------------------------------------------------------------------------------- Motif CRRCGACGAKGBVGWGSSMAGCGATGAGGAGVAGMDSSGC MEME-1 Description -------------------------------------------------------------------------------- Simplified A :43::711a:::4:6:::471::9::9:19:39:34:::: pos.-specific C 9:17::91:1:43:116361:a::1::1:1:3::6:363a probability G :661a3:7:3a33a:936::7:a:1a199:94:a:3647: matrix T 1::1:::::6:3::3:11:11::17:::::1:1:131::: bits 2.4 * 2.2 * 1.9 * 1.7 * * * * *** ** * ** * Relative 1.4 * * * * *** ** * ** * Entropy 1.2 * *** * * * * * *** ****** ** * (44.7 bits) 1.0 ** *** * * *** ** ********** ** ** 0.7 ** ******** *** ************* **** *** 0.5 *********** ******************* ******** 0.2 **************************************** 0.0 ---------------------------------------- Multilevel CGGCGACGATGCAGAGCGCAGCGATGAGGAGGAGCAGCGC consensus AA G G GC T GCA A AGCGC sequence TG C T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CRRCGACGAKGBVGWGSSMAGCGATGAGGAGVAGMDSSGC MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ---------------------------------------- MNBBKBOB_00746 11 2.74e-22 CGGCCTAGCC CGGCGACGATGCAGAGCGAAGCGATGAGGAGGAGCAGGGC AATGCGGCCT MNBBKBOB_01377 59 1.36e-21 TGACCCGCGC CAGCGACGATGCAGAGCGAAGCGATGAGGAGAAGCGGCGC CA MNBBKBOB_01803 59 2.17e-18 TTTCGTGGAC CGGTGACGATGCAGAGCGCAGCGATGAGAAGGAGCGGCGC TT MNBBKBOB_00760 4 6.85e-15 GCG CAGCGGCGAGGGGGCCGCAAGCGATGAGGAGGAGTAGCGC TCGATGACCG MNBBKBOB_01385 7 3.85e-13 GGTGCC CGACGAACATGTCGAGGCCCTCGACGAGGATAAGCTCGCC AAGGAAGCCG MNBBKBOB_00745 17 1.21e-12 ACGTGCTGCG TGCCGACGACGTGGTGTTCAGCGTTGAGGCGCTGAATGCC TATATCGCGG MNBBKBOB_00762 32 3.05e-12 CCGATCCGTA CAAGGGCAAGGGCGTGCGCTACGAGGGCGAGCAGATCCGC CGCAAGGTCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CRRCGACGAKGBVGWGSSMAGCGATGAGGAGVAGMDSSGC MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- MNBBKBOB_00746 2.7e-22 10_[+1]_50 MNBBKBOB_01377 1.4e-21 58_[+1]_2 MNBBKBOB_01803 2.2e-18 58_[+1]_2 MNBBKBOB_00760 6.8e-15 3_[+1]_57 MNBBKBOB_01385 3.8e-13 6_[+1]_54 MNBBKBOB_00745 1.2e-12 16_[+1]_44 MNBBKBOB_00762 3e-12 31_[+1]_29 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CRRCGACGAKGBVGWGSSMAGCGATGAGGAGVAGMDSSGC MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CRRCGACGAKGBVGWGSSMAGCGATGAGGAGVAGMDSSGC width=40 seqs=7 MNBBKBOB_00746 ( 11) CGGCGACGATGCAGAGCGAAGCGATGAGGAGGAGCAGGGC 1 MNBBKBOB_01377 ( 59) CAGCGACGATGCAGAGCGAAGCGATGAGGAGAAGCGGCGC 1 MNBBKBOB_01803 ( 59) CGGTGACGATGCAGAGCGCAGCGATGAGAAGGAGCGGCGC 1 MNBBKBOB_00760 ( 4) CAGCGGCGAGGGGGCCGCAAGCGATGAGGAGGAGTAGCGC 1 MNBBKBOB_01385 ( 7) CGACGAACATGTCGAGGCCCTCGACGAGGATAAGCTCGCC 1 MNBBKBOB_00745 ( 17) TGCCGACGACGTGGTGTTCAGCGTTGAGGCGCTGAATGCC 1 MNBBKBOB_00762 ( 32) CAAGGGCAAGGGCGTGCGCTACGAGGGCGAGCAGATCCGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CRRCGACGAKGBVGWGSSMAGCGATGAGGAGVAGMDSSGC MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 40 n= 16409 bayes= 11.038 E= 2.5e-009 -945 149 -945 -41 109 -945 91 -945 50 -109 91 -945 -945 123 -109 -41 -945 -945 172 -945 183 -945 -9 -945 -49 149 -945 -945 -49 -109 123 -945 231 -945 -945 -945 -945 -109 -9 158 -945 -945 172 -945 -945 49 -9 58 109 -9 -9 -945 -945 -945 172 -945 150 -109 -945 58 -945 -109 149 -945 -945 91 -9 -41 -945 -9 91 -41 109 91 -945 -945 183 -109 -945 -41 -49 -945 123 -41 -945 172 -945 -945 -945 -945 172 -945 209 -945 -945 -41 -945 -109 -109 190 -945 -945 172 -945 209 -945 -109 -945 -945 -109 149 -945 -49 -945 149 -945 209 -109 -945 -945 -945 -945 149 -41 50 -9 49 -945 209 -945 -945 -41 -945 -945 172 -945 50 91 -945 -41 109 -945 -9 58 -945 -9 91 -41 -945 91 49 -945 -945 -9 123 -945 -945 172 -945 -945 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CRRCGACGAKGBVGWGSSMAGCGATGAGGAGVAGMDSSGC MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 40 nsites= 7 E= 2.5e-009 0.000000 0.857143 0.000000 0.142857 0.428571 0.000000 0.571429 0.000000 0.285714 0.142857 0.571429 0.000000 0.000000 0.714286 0.142857 0.142857 0.000000 0.000000 1.000000 0.000000 0.714286 0.000000 0.285714 0.000000 0.142857 0.857143 0.000000 0.000000 0.142857 0.142857 0.714286 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.142857 0.285714 0.571429 0.000000 0.000000 1.000000 0.000000 0.000000 0.428571 0.285714 0.285714 0.428571 0.285714 0.285714 0.000000 0.000000 0.000000 1.000000 0.000000 0.571429 0.142857 0.000000 0.285714 0.000000 0.142857 0.857143 0.000000 0.000000 0.571429 0.285714 0.142857 0.000000 0.285714 0.571429 0.142857 0.428571 0.571429 0.000000 0.000000 0.714286 0.142857 0.000000 0.142857 0.142857 0.000000 0.714286 0.142857 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.857143 0.000000 0.000000 0.142857 0.000000 0.142857 0.142857 0.714286 0.000000 0.000000 1.000000 0.000000 0.857143 0.000000 0.142857 0.000000 0.000000 0.142857 0.857143 0.000000 0.142857 0.000000 0.857143 0.000000 0.857143 0.142857 0.000000 0.000000 0.000000 0.000000 0.857143 0.142857 0.285714 0.285714 0.428571 0.000000 0.857143 0.000000 0.000000 0.142857 0.000000 0.000000 1.000000 0.000000 0.285714 0.571429 0.000000 0.142857 0.428571 0.000000 0.285714 0.285714 0.000000 0.285714 0.571429 0.142857 0.000000 0.571429 0.428571 0.000000 0.000000 0.285714 0.714286 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CRRCGACGAKGBVGWGSSMAGCGATGAGGAGVAGMDSSGC MEME-1 regular expression -------------------------------------------------------------------------------- C[GA][GA]CG[AG]CGA[TG]G[CGT][ACG]G[AT]G[CG][GC][CA]AGCGATGAGGAG[GAC]AG[CA][AGT][GC][CG][GC]C -------------------------------------------------------------------------------- Time 33.36 secs. ******************************************************************************** ******************************************************************************** MOTIF TWCTNAYARDYWAADWYKWSAWSKWMACDWMYKHYWTWMASSAYARGCT MEME-2 width = 49 sites = 7 llr = 204 E-value = 6.0e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif TWCTNAYARDYWAADWYKWSAWSKWMACDWMYKHYWTWMASSAYARGCT MEME-2 Description -------------------------------------------------------------------------------- Simplified A 141:37:76316a6341:6194::4471364114141636:17193:31 pos.-specific C 1:731:6:::4::1::31:3::4113:6::43:33:::4143:311:7: probability G ::::3:1:33:::13113:41:43:1:14::14::11:1164:1:49:: matrix T 761733331444:1444641:6164131341443647411:134:11:9 bits 2.4 * 2.2 * 1.9 * 1.7 * * * * Relative 1.4 * * * * ** * ** * * * * * * Entropy 1.2 ** * * * ** * ** * * ** * * * * (42.1 bits) 1.0 ** * * * ** * ** * * ** * * *** 0.7 **** * ****** ** ** ** ** * ** ****** * * * *** 0.5 **** *********** ** ***** * *** ****** ** * * *** 0.2 ******************* ********************* ******* 0.0 ------------------------------------------------- Multilevel TTCTAACAATCAAATATTAGATCTAAACGAATGATATACAGGATAGGCT consensus A CGTTTGATT ATCGTC AGGTCT ATCCTCCT TA CCTC A A sequence T G G T T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWCTNAYARDYWAADWYKWSAWSKWMACDWMYKHYWTWMASSAYARGCT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------------------------------------------- MNBBKBOB_00349 46 2.77e-20 GGCGGCTCCC TTCTGATAATCAAATGTTTGATGTAAACGAATGCTTATCACGATAGGAT GCAGCT MNBBKBOB_02917 46 3.83e-15 GAAGTCATAC TTCTTTCAAGCTAATTAGACGTTCTAACGACTACTATTAAGAAAAAGCT CCGGTA MNBBKBOB_02094 26 1.97e-14 TACCCAGTCA TATCGATTATTAAGAAGTAAATGTAATCGTAATAATTACACGTCACGCT GCGAGGCGTC MNBBKBOB_02106 44 1.69e-13 GTATAGACGA TACCTACATGTTAAGTCGAGAACGACAATATGGTCATATACCACATGAT AAACTAGA MNBBKBOB_03932 44 2.10e-13 CCCGGCCAAC ATATCAGAATATATGATCATATGTTCATTTATTTCTTTGGGGATAGGCT GCCTAACC MNBBKBOB_02757 20 4.81e-13 GCCTCCCGAC TTCTAACAGACAACAATTTGAACGTTAGATCCTATAGACTGTATCGTCA AGTGTTTTGT MNBBKBOB_00092 39 5.49e-13 CACGCATCCG CACTATCTGATAAATTCTTCAACTCGTCAACCGATGTAACGCTGAAGCT CTCAGGAGAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWCTNAYARDYWAADWYKWSAWSKWMACDWMYKHYWTWMASSAYARGCT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- MNBBKBOB_00349 2.8e-20 45_[+2]_6 MNBBKBOB_02917 3.8e-15 45_[+2]_6 MNBBKBOB_02094 2e-14 25_[+2]_26 MNBBKBOB_02106 1.7e-13 43_[+2]_8 MNBBKBOB_03932 2.1e-13 43_[+2]_8 MNBBKBOB_02757 4.8e-13 19_[+2]_32 MNBBKBOB_00092 5.5e-13 38_[+2]_13 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWCTNAYARDYWAADWYKWSAWSKWMACDWMYKHYWTWMASSAYARGCT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TWCTNAYARDYWAADWYKWSAWSKWMACDWMYKHYWTWMASSAYARGCT width=49 seqs=7 MNBBKBOB_00349 ( 46) TTCTGATAATCAAATGTTTGATGTAAACGAATGCTTATCACGATAGGAT 1 MNBBKBOB_02917 ( 46) TTCTTTCAAGCTAATTAGACGTTCTAACGACTACTATTAAGAAAAAGCT 1 MNBBKBOB_02094 ( 26) TATCGATTATTAAGAAGTAAATGTAATCGTAATAATTACACGTCACGCT 1 MNBBKBOB_02106 ( 44) TACCTACATGTTAAGTCGAGAACGACAATATGGTCATATACCACATGAT 1 MNBBKBOB_03932 ( 44) ATATCAGAATATATGATCATATGTTCATTTATTTCTTTGGGGATAGGCT 1 MNBBKBOB_02757 ( 20) TTCTAACAGACAACAATTTGAACGTTAGATCCTATAGACTGTATCGTCA 1 MNBBKBOB_00092 ( 39) CACTATCTGATAAATTCTTCAACTCGTCAACCGATGTAACGCTGAAGCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWCTNAYARDYWAADWYKWSAWSKWMACDWMYKHYWTWMASSAYARGCT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 49 n= 13988 bayes= 11.5698 E= 6.0e+000 -49 -109 -945 190 109 -945 -945 158 -49 123 -945 -41 -945 -9 -945 190 50 -109 -9 58 183 -945 -945 58 -945 91 -109 58 183 -945 -945 58 150 -945 -9 -41 50 -945 -9 117 -49 49 -945 117 150 -945 -945 117 231 -945 -945 -945 150 -109 -109 -41 50 -945 -9 117 109 -945 -109 117 -49 -9 -109 117 -945 -109 -9 158 150 -945 -945 117 -49 -9 49 -41 209 -945 -109 -945 109 -945 -945 158 -945 49 49 -41 -945 -109 -9 158 109 -109 -945 117 109 -9 -109 -41 183 -945 -945 58 -49 91 -109 -41 50 -945 49 58 150 -945 -945 117 109 49 -945 -41 -49 -9 -109 117 -49 -945 49 117 109 -9 -945 58 -49 -9 -945 158 109 -945 -109 117 -49 -945 -109 190 150 -945 -945 117 50 49 -109 -41 150 -109 -109 -41 -945 49 91 -945 -49 -9 49 -41 183 -945 -945 58 -49 -9 -109 117 209 -109 -945 -945 50 -109 49 -41 -945 -945 149 -41 50 123 -945 -945 -49 -945 -945 217 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWCTNAYARDYWAADWYKWSAWSKWMACDWMYKHYWTWMASSAYARGCT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 49 nsites= 7 E= 6.0e+000 0.142857 0.142857 0.000000 0.714286 0.428571 0.000000 0.000000 0.571429 0.142857 0.714286 0.000000 0.142857 0.000000 0.285714 0.000000 0.714286 0.285714 0.142857 0.285714 0.285714 0.714286 0.000000 0.000000 0.285714 0.000000 0.571429 0.142857 0.285714 0.714286 0.000000 0.000000 0.285714 0.571429 0.000000 0.285714 0.142857 0.285714 0.000000 0.285714 0.428571 0.142857 0.428571 0.000000 0.428571 0.571429 0.000000 0.000000 0.428571 1.000000 0.000000 0.000000 0.000000 0.571429 0.142857 0.142857 0.142857 0.285714 0.000000 0.285714 0.428571 0.428571 0.000000 0.142857 0.428571 0.142857 0.285714 0.142857 0.428571 0.000000 0.142857 0.285714 0.571429 0.571429 0.000000 0.000000 0.428571 0.142857 0.285714 0.428571 0.142857 0.857143 0.000000 0.142857 0.000000 0.428571 0.000000 0.000000 0.571429 0.000000 0.428571 0.428571 0.142857 0.000000 0.142857 0.285714 0.571429 0.428571 0.142857 0.000000 0.428571 0.428571 0.285714 0.142857 0.142857 0.714286 0.000000 0.000000 0.285714 0.142857 0.571429 0.142857 0.142857 0.285714 0.000000 0.428571 0.285714 0.571429 0.000000 0.000000 0.428571 0.428571 0.428571 0.000000 0.142857 0.142857 0.285714 0.142857 0.428571 0.142857 0.000000 0.428571 0.428571 0.428571 0.285714 0.000000 0.285714 0.142857 0.285714 0.000000 0.571429 0.428571 0.000000 0.142857 0.428571 0.142857 0.000000 0.142857 0.714286 0.571429 0.000000 0.000000 0.428571 0.285714 0.428571 0.142857 0.142857 0.571429 0.142857 0.142857 0.142857 0.000000 0.428571 0.571429 0.000000 0.142857 0.285714 0.428571 0.142857 0.714286 0.000000 0.000000 0.285714 0.142857 0.285714 0.142857 0.428571 0.857143 0.142857 0.000000 0.000000 0.285714 0.142857 0.428571 0.142857 0.000000 0.000000 0.857143 0.142857 0.285714 0.714286 0.000000 0.000000 0.142857 0.000000 0.000000 0.857143 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWCTNAYARDYWAADWYKWSAWSKWMACDWMYKHYWTWMASSAYARGCT MEME-2 regular expression -------------------------------------------------------------------------------- T[TA]C[TC][AGT][AT][CT][AT][AG][TAG][CT][AT]AA[TAG][AT][TC][TG][AT][GC]A[TA][CG][TG][AT][AC][AT]C[GAT][AT][AC][TC][GT][ACT][TC][AT]T[AT][CA]A[GC][GC][AT][TC]A[GA]G[CA]T -------------------------------------------------------------------------------- Time 64.88 secs. ******************************************************************************** ******************************************************************************** MOTIF TRWCWSWAGRCAKMAAGACHMGTTWTAWA MEME-3 width = 29 sites = 7 llr = 160 E-value = 3.7e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif TRWCWSWAGRCAKMAAGACHMGTTWTAWA MEME-3 Description -------------------------------------------------------------------------------- Simplified A :6414:4936:a1379:9143:::61a37 pos.-specific C ::19:611::7::6::117343::1::1: probability G :41:13::74::41:17:::17:3:1:1: matrix T a:3:414:::3:4:3:1:131:a737:43 bits 2.4 * * * * 2.2 * * * * 1.9 * * * * 1.7 * * * * * * * Relative 1.4 * * * ** * ** * * Entropy 1.2 * * * * ** * ** ** * (32.9 bits) 1.0 ** * ***** ** * ****** * 0.7 ** ** ******* ****** ****** * 0.5 ** ***************** ****** * 0.2 ***************************** 0.0 ----------------------------- Multilevel TAACACAAGACAGCAAGACACGTTATATA consensus GT TGT AGT TAT CAC GT AT sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRWCWSWAGRCAKMAAGACHMGTTWTAWA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ----------------------------- MNBBKBOB_01872 14 1.99e-13 TAAAGCTTAG TAACACTAGGCATAAAGCCAAGTGATATA ACGTCAACAC MNBBKBOB_00727 43 1.17e-12 GACCGCGGCA TAACTGAAAACATCAACACTGCTTTTATA AGCACTAACA MNBBKBOB_00351 5 7.24e-12 AGCG TAGCTCAAGGTATATAGAAACCTTATAAT CTAAGGCGGC MNBBKBOB_00733 39 2.01e-11 CGTCCAGAGC TGTCGCTAGGCAGCTAGACCTGTGTTATA CCGTAGCTCA MNBBKBOB_03209 13 3.93e-11 CCACCGACAT TGACTTTAGATAGGAAGACCAGTTAAACT GCCGATGGCT MNBBKBOB_00674 64 1.39e-10 CGGCCATCGC TACAACACAACAGCAAGACTCGTTAGAGA GAACGGAT MNBBKBOB_01484 20 3.18e-10 TACCGAATTG TGTCAGCAGACAACAGTATACGTTCTAAA TAATCAATGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRWCWSWAGRCAKMAAGACHMGTTWTAWA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- MNBBKBOB_01872 2e-13 13_[+3]_58 MNBBKBOB_00727 1.2e-12 42_[+3]_29 MNBBKBOB_00351 7.2e-12 4_[+3]_67 MNBBKBOB_00733 2e-11 38_[+3]_33 MNBBKBOB_03209 3.9e-11 12_[+3]_59 MNBBKBOB_00674 1.4e-10 63_[+3]_8 MNBBKBOB_01484 3.2e-10 19_[+3]_52 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRWCWSWAGRCAKMAAGACHMGTTWTAWA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TRWCWSWAGRCAKMAAGACHMGTTWTAWA width=29 seqs=7 MNBBKBOB_01872 ( 14) TAACACTAGGCATAAAGCCAAGTGATATA 1 MNBBKBOB_00727 ( 43) TAACTGAAAACATCAACACTGCTTTTATA 1 MNBBKBOB_00351 ( 5) TAGCTCAAGGTATATAGAAACCTTATAAT 1 MNBBKBOB_00733 ( 39) TGTCGCTAGGCAGCTAGACCTGTGTTATA 1 MNBBKBOB_03209 ( 13) TGACTTTAGATAGGAAGACCAGTTAAACT 1 MNBBKBOB_00674 ( 64) TACAACACAACAGCAAGACTCGTTAGAGA 1 MNBBKBOB_01484 ( 20) TGTCAGCAGACAACAGTATACGTTCTAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRWCWSWAGRCAKMAAGACHMGTTWTAWA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 19368 bayes= 12.0394 E= 3.7e-001 -945 -945 -945 239 150 -945 49 -945 109 -109 -109 58 -49 149 -945 -945 109 -945 -109 117 -945 91 -9 -41 109 -109 -945 117 209 -109 -945 -945 50 -945 123 -945 150 -945 49 -945 -945 123 -945 58 231 -945 -945 -945 -49 -945 49 117 50 91 -109 -945 183 -945 -945 58 209 -945 -109 -945 -945 -109 123 -41 209 -109 -945 -945 -49 123 -945 -41 109 -9 -945 58 50 49 -109 -41 -945 -9 123 -945 -945 -945 -945 239 -945 -945 -9 190 150 -109 -945 58 -49 -945 -109 190 231 -945 -945 -945 50 -109 -109 117 183 -945 -945 58 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRWCWSWAGRCAKMAAGACHMGTTWTAWA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 7 E= 3.7e-001 0.000000 0.000000 0.000000 1.000000 0.571429 0.000000 0.428571 0.000000 0.428571 0.142857 0.142857 0.285714 0.142857 0.857143 0.000000 0.000000 0.428571 0.000000 0.142857 0.428571 0.000000 0.571429 0.285714 0.142857 0.428571 0.142857 0.000000 0.428571 0.857143 0.142857 0.000000 0.000000 0.285714 0.000000 0.714286 0.000000 0.571429 0.000000 0.428571 0.000000 0.000000 0.714286 0.000000 0.285714 1.000000 0.000000 0.000000 0.000000 0.142857 0.000000 0.428571 0.428571 0.285714 0.571429 0.142857 0.000000 0.714286 0.000000 0.000000 0.285714 0.857143 0.000000 0.142857 0.000000 0.000000 0.142857 0.714286 0.142857 0.857143 0.142857 0.000000 0.000000 0.142857 0.714286 0.000000 0.142857 0.428571 0.285714 0.000000 0.285714 0.285714 0.428571 0.142857 0.142857 0.000000 0.285714 0.714286 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.285714 0.714286 0.571429 0.142857 0.000000 0.285714 0.142857 0.000000 0.142857 0.714286 1.000000 0.000000 0.000000 0.000000 0.285714 0.142857 0.142857 0.428571 0.714286 0.000000 0.000000 0.285714 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRWCWSWAGRCAKMAAGACHMGTTWTAWA MEME-3 regular expression -------------------------------------------------------------------------------- T[AG][AT]C[AT][CG][AT]A[GA][AG][CT]A[GT][CA][AT]AGAC[ACT][CA][GC]T[TG][AT]TA[TA][AT] -------------------------------------------------------------------------------- Time 96.00 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- MNBBKBOB_00002 5.36e-01 100 MNBBKBOB_00030 5.49e-01 100 MNBBKBOB_00036 9.83e-01 100 MNBBKBOB_00045 9.96e-01 100 MNBBKBOB_00049 1.95e-01 100 MNBBKBOB_00050 6.89e-01 100 MNBBKBOB_00054 4.80e-01 100 MNBBKBOB_00059 9.83e-01 100 MNBBKBOB_00060 9.79e-01 100 MNBBKBOB_00062 3.91e-01 100 MNBBKBOB_00063 6.22e-01 100 MNBBKBOB_00076 5.54e-01 100 MNBBKBOB_00087 7.41e-02 100 MNBBKBOB_00092 1.43e-09 38_[+2(5.49e-13)]_13 MNBBKBOB_00113 8.39e-01 100 MNBBKBOB_00117 4.12e-01 100 MNBBKBOB_00130 9.19e-01 100 MNBBKBOB_00133 5.13e-01 100 MNBBKBOB_00148 2.46e-02 100 MNBBKBOB_00157 6.43e-01 100 MNBBKBOB_00173 2.99e-01 100 MNBBKBOB_00180 2.94e-01 100 MNBBKBOB_00197 2.05e-01 100 MNBBKBOB_00214 5.50e-02 100 MNBBKBOB_00248 3.17e-01 100 MNBBKBOB_00251 7.73e-02 100 MNBBKBOB_00258 4.15e-01 100 MNBBKBOB_00292 6.41e-02 100 MNBBKBOB_00294 1.13e-01 100 MNBBKBOB_00322 3.80e-01 100 MNBBKBOB_00349 2.95e-16 45_[+2(2.77e-20)]_6 MNBBKBOB_00351 8.44e-09 4_[+3(7.24e-12)]_67 MNBBKBOB_00399 1.92e-01 100 MNBBKBOB_00468 6.50e-01 100 MNBBKBOB_00489 7.32e-01 100 MNBBKBOB_00497 4.63e-02 100 MNBBKBOB_00499 3.24e-01 100 MNBBKBOB_00510 8.72e-01 100 MNBBKBOB_00520 1.91e-01 100 MNBBKBOB_00619 1.76e-01 100 MNBBKBOB_00671 7.89e-01 100 MNBBKBOB_00674 5.77e-07 63_[+3(1.39e-10)]_8 MNBBKBOB_00680 8.81e-01 100 MNBBKBOB_00681 4.86e-01 100 MNBBKBOB_00682 5.88e-01 100 MNBBKBOB_00691 3.21e-01 100 MNBBKBOB_00692 6.36e-01 100 MNBBKBOB_00693 8.53e-01 100 MNBBKBOB_00694 1.44e-01 100 MNBBKBOB_00698 1.11e-01 100 MNBBKBOB_00701 2.53e-01 100 MNBBKBOB_00708 9.07e-01 100 MNBBKBOB_00709 2.44e-02 59_[+3(5.51e-05)]_12 MNBBKBOB_00713 6.91e-01 100 MNBBKBOB_00716 8.17e-02 28_[+1(8.90e-05)]_32 MNBBKBOB_00724 3.06e-01 100 MNBBKBOB_00725 2.18e-01 100 MNBBKBOB_00726 9.31e-02 100 MNBBKBOB_00727 3.11e-09 42_[+3(1.17e-12)]_29 MNBBKBOB_00733 2.95e-09 38_[+3(2.01e-11)]_33 MNBBKBOB_00742 1.69e-02 23_[+1(4.80e-05)]_37 MNBBKBOB_00743 7.41e-02 100 MNBBKBOB_00744 2.62e-01 100 MNBBKBOB_00745 5.57e-09 16_[+1(1.21e-12)]_44 MNBBKBOB_00746 8.17e-18 10_[+1(2.74e-22)]_50 MNBBKBOB_00747 8.66e-01 100 MNBBKBOB_00748 2.13e-01 100 MNBBKBOB_00749 6.86e-01 100 MNBBKBOB_00750 4.57e-01 100 MNBBKBOB_00751 6.17e-01 100 MNBBKBOB_00752 8.51e-01 100 MNBBKBOB_00756 8.91e-01 100 MNBBKBOB_00757 7.65e-01 100 MNBBKBOB_00758 1.81e-01 100 MNBBKBOB_00759 8.79e-01 100 MNBBKBOB_00760 6.74e-11 3_[+1(6.85e-15)]_57 MNBBKBOB_00761 2.29e-01 100 MNBBKBOB_00762 8.49e-10 31_[+1(3.05e-12)]_29 MNBBKBOB_00763 9.58e-01 100 MNBBKBOB_00764 7.29e-01 100 MNBBKBOB_00765 6.40e-01 100 MNBBKBOB_00772 6.65e-01 100 MNBBKBOB_00777 4.37e-01 100 MNBBKBOB_00778 5.62e-01 100 MNBBKBOB_00779 2.08e-01 100 MNBBKBOB_00812 3.41e-01 100 MNBBKBOB_00839 1.74e-01 100 MNBBKBOB_00849 7.88e-01 100 MNBBKBOB_00870 8.87e-01 100 MNBBKBOB_00875 1.26e-01 100 MNBBKBOB_00931 5.62e-01 100 MNBBKBOB_01050 9.39e-01 100 MNBBKBOB_01071 2.95e-01 100 MNBBKBOB_01076 5.11e-01 100 MNBBKBOB_01077 2.63e-01 100 MNBBKBOB_01105 2.28e-01 100 MNBBKBOB_01110 8.14e-01 100 MNBBKBOB_01144 3.28e-01 100 MNBBKBOB_01176 2.43e-01 100 MNBBKBOB_01195 5.34e-01 100 MNBBKBOB_01220 1.99e-01 100 MNBBKBOB_01238 9.63e-01 100 MNBBKBOB_01248 2.87e-01 100 MNBBKBOB_01261 6.89e-01 100 MNBBKBOB_01292 7.30e-01 100 MNBBKBOB_01294 1.90e-01 100 MNBBKBOB_01319 5.96e-01 100 MNBBKBOB_01328 8.37e-01 100 MNBBKBOB_01340 8.41e-01 100 MNBBKBOB_01360 5.02e-01 100 MNBBKBOB_01373 1.61e-01 100 MNBBKBOB_01374 9.75e-01 100 MNBBKBOB_01377 2.52e-17 58_[+1(1.36e-21)]_2 MNBBKBOB_01380 7.60e-01 100 MNBBKBOB_01381 5.91e-01 100 MNBBKBOB_01382 3.08e-01 100 MNBBKBOB_01383 8.92e-01 100 MNBBKBOB_01384 5.07e-01 100 MNBBKBOB_01385 2.31e-09 6_[+1(3.85e-13)]_54 MNBBKBOB_01386 8.46e-01 100 MNBBKBOB_01387 2.61e-02 100 MNBBKBOB_01470 2.33e-01 100 MNBBKBOB_01484 4.51e-09 19_[+3(3.18e-10)]_52 MNBBKBOB_01543 6.75e-01 100 MNBBKBOB_01558 7.76e-01 100 MNBBKBOB_01590 5.90e-01 100 MNBBKBOB_01621 9.77e-02 100 MNBBKBOB_01624 1.94e-01 100 MNBBKBOB_01634 4.34e-01 100 MNBBKBOB_01644 9.05e-01 100 MNBBKBOB_01648 9.36e-01 100 MNBBKBOB_01665 9.63e-01 100 MNBBKBOB_01717 8.04e-01 100 MNBBKBOB_01718 9.15e-01 100 MNBBKBOB_01731 6.95e-01 100 MNBBKBOB_01732 1.40e-01 100 MNBBKBOB_01733 9.58e-01 100 MNBBKBOB_01775 7.22e-01 100 MNBBKBOB_01803 8.04e-14 58_[+1(2.17e-18)]_2 MNBBKBOB_01812 9.77e-01 100 MNBBKBOB_01820 1.41e-01 100 MNBBKBOB_01872 6.56e-11 13_[+3(1.99e-13)]_58 MNBBKBOB_01926 7.76e-01 100 MNBBKBOB_01944 1.96e-01 100 MNBBKBOB_02031 6.83e-01 100 MNBBKBOB_02032 7.68e-01 100 MNBBKBOB_02033 6.37e-01 100 MNBBKBOB_02063 8.83e-01 100 MNBBKBOB_02068 6.24e-01 100 MNBBKBOB_02094 1.71e-12 25_[+2(1.97e-14)]_26 MNBBKBOB_02106 9.77e-10 43_[+2(1.69e-13)]_8 MNBBKBOB_02122 3.32e-02 100 MNBBKBOB_02134 8.67e-01 100 MNBBKBOB_02147 7.73e-01 100 MNBBKBOB_02168 7.98e-01 100 MNBBKBOB_02169 7.56e-01 100 MNBBKBOB_02170 6.10e-01 100 MNBBKBOB_02171 1.39e-01 100 MNBBKBOB_02182 9.70e-01 100 MNBBKBOB_02208 2.63e-01 100 MNBBKBOB_02209 9.64e-01 100 MNBBKBOB_02247 3.58e-01 100 MNBBKBOB_02311 7.48e-01 100 MNBBKBOB_02374 2.60e-01 100 MNBBKBOB_02380 8.07e-01 100 MNBBKBOB_02405 9.61e-01 100 MNBBKBOB_02453 3.64e-01 100 MNBBKBOB_02456 8.73e-01 100 MNBBKBOB_02490 2.33e-01 100 MNBBKBOB_02506 9.13e-01 100 MNBBKBOB_02507 9.02e-01 100 MNBBKBOB_02511 9.64e-01 100 MNBBKBOB_02512 9.43e-01 100 MNBBKBOB_02515 1.31e-01 100 MNBBKBOB_02544 1.04e-01 100 MNBBKBOB_02545 2.95e-01 100 MNBBKBOB_02575 5.89e-01 100 MNBBKBOB_02576 7.76e-01 100 MNBBKBOB_02639 1.55e-01 100 MNBBKBOB_02662 2.94e-01 100 MNBBKBOB_02669 2.08e-01 100 MNBBKBOB_02670 7.63e-01 100 MNBBKBOB_02681 5.92e-01 100 MNBBKBOB_02728 1.47e-02 [+2(7.35e-05)]_51 MNBBKBOB_02757 7.50e-10 19_[+2(4.81e-13)]_32 MNBBKBOB_02760 2.48e-01 100 MNBBKBOB_02779 2.18e-02 100 MNBBKBOB_02781 9.79e-01 100 MNBBKBOB_02843 7.94e-01 100 MNBBKBOB_02844 5.14e-01 100 MNBBKBOB_02845 9.36e-01 100 MNBBKBOB_02851 7.25e-01 100 MNBBKBOB_02852 6.04e-01 100 MNBBKBOB_02859 9.25e-01 100 MNBBKBOB_02861 1.27e-01 100 MNBBKBOB_02884 3.17e-01 100 MNBBKBOB_02896 7.25e-01 100 MNBBKBOB_02917 2.48e-11 45_[+2(3.83e-15)]_6 MNBBKBOB_02923 3.53e-01 100 MNBBKBOB_02926 8.33e-01 100 MNBBKBOB_02979 8.72e-01 100 MNBBKBOB_02980 6.80e-01 100 MNBBKBOB_03007 5.93e-01 100 MNBBKBOB_03028 8.66e-01 100 MNBBKBOB_03030 6.82e-01 100 MNBBKBOB_03031 9.60e-01 100 MNBBKBOB_03046 6.99e-01 100 MNBBKBOB_03051 8.34e-01 100 MNBBKBOB_03054 9.45e-01 100 MNBBKBOB_03071 2.27e-01 100 MNBBKBOB_03119 5.87e-02 100 MNBBKBOB_03133 4.73e-01 100 MNBBKBOB_03201 9.69e-01 100 MNBBKBOB_03206 9.55e-01 100 MNBBKBOB_03207 7.17e-01 100 MNBBKBOB_03209 3.20e-09 12_[+3(3.93e-11)]_59 MNBBKBOB_03211 9.68e-01 100 MNBBKBOB_03232 9.08e-01 100 MNBBKBOB_03248 5.68e-01 100 MNBBKBOB_03279 8.54e-01 100 MNBBKBOB_03316 9.07e-01 100 MNBBKBOB_03323 9.61e-01 100 MNBBKBOB_03329 3.93e-01 100 MNBBKBOB_03339 1.65e-01 100 MNBBKBOB_03373 4.94e-01 100 MNBBKBOB_03392 9.61e-01 100 MNBBKBOB_03419 8.49e-01 100 MNBBKBOB_03435 3.74e-01 100 MNBBKBOB_03438 9.97e-01 100 MNBBKBOB_03457 4.68e-01 100 MNBBKBOB_03462 9.92e-01 100 MNBBKBOB_03466 3.71e-01 100 MNBBKBOB_03469 9.55e-01 100 MNBBKBOB_03502 8.48e-01 100 MNBBKBOB_03509 4.34e-02 100 MNBBKBOB_03546 2.07e-01 100 MNBBKBOB_03570 7.89e-01 100 MNBBKBOB_03573 9.56e-01 100 MNBBKBOB_03586 1.01e-01 100 MNBBKBOB_03595 8.99e-01 100 MNBBKBOB_03627 7.89e-01 100 MNBBKBOB_03628 2.09e-01 100 MNBBKBOB_03641 8.61e-01 100 MNBBKBOB_03642 6.56e-01 100 MNBBKBOB_03643 5.22e-01 100 MNBBKBOB_03644 9.80e-01 100 MNBBKBOB_03645 9.81e-01 100 MNBBKBOB_03646 2.91e-01 100 MNBBKBOB_03667 6.27e-01 100 MNBBKBOB_03671 9.78e-02 100 MNBBKBOB_03742 9.67e-01 100 MNBBKBOB_03759 5.22e-01 100 MNBBKBOB_03760 2.73e-01 100 MNBBKBOB_03768 5.46e-01 100 MNBBKBOB_03784 7.71e-01 100 MNBBKBOB_03826 1.89e-01 100 MNBBKBOB_03859 3.15e-01 100 MNBBKBOB_03896 6.03e-01 100 MNBBKBOB_03906 3.63e-01 100 MNBBKBOB_03907 8.43e-01 100 MNBBKBOB_03932 1.72e-12 43_[+2(2.10e-13)]_8 MNBBKBOB_03982 5.54e-01 100 MNBBKBOB_04025 2.90e-01 100 MNBBKBOB_04028 1.43e-01 100 MNBBKBOB_04036 7.80e-01 100 MNBBKBOB_04055 2.11e-01 100 MNBBKBOB_04110 3.67e-01 100 MNBBKBOB_04114 7.75e-01 100 MNBBKBOB_04120 1.22e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kodomo ********************************************************************************