load H:\Term3\Credit\1efw.pdb1
restrict RNA
define   helix1   1-7C, 66-72Ñ
define   helix2   10-14C, 21-25C
define   helix3   26-32C, 38-44C
define   helix4   50-53C, 61-64Ñ 
define helixes  helix1,helix2,helix3, helix4
echo  tRNA helixes are defined as helix1, helix2, helix3, helix4   
echo helixes is for joint of helix1, helix2, helix3, helix4 
define loop1   8-9Ñ
define loop2   15-20C
define loop3   33-37C
define loop4   45-49C
define loop5   54-60C
define loop6   65C
define loops  loop1, loop2, loop3, loop4, loop5, loop 6
echo  tRNA loops are defined as loop1, loop2, loop3, loop4, loop5, loop6 
echo loops is for joint of loop1, loop2, loop3, loop4, loop5, loop6
define knot1     4C, 69C
define knot2    10C, 25C
define knot3    14C, 21C
define knot4    26C, 44C
define knots  knot1, knot2, knot3, knot4
echo  tRNA knots are defined as knot1, knot2, knot3, knot4
echo knots is for joint of knot1, knot2, knot3, knot4
define anticodon   28-30C
echo  tRNA anticodon is defined as anticodon
echo Helixes will be in yellow
select helixes
color yellow
pause           
# This command forces Rasmol to stop and wait for Enter
echo Loops will be in green
select loops
color green
pause    
echo knots will be in blue       
select knots
color blue
pause           
echo anticodon will be in red
select anticodon
color red
pause           
echo  CUG anticodon is in red!
pause
echo   Thank you
====