******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.10.1 (Release date: Wed Mar 25 11:40:43 2015 +1000) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= NC_014222.fasta ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ complement(48123..48503) 1.0000 35 complement(542844..54314 1.0000 35 complement(50587..51882) 1.0000 35 complement(543168..54415 1.0000 35 complement(594626..59488 1.0000 35 complement(594910..59587 1.0000 35 complement(603659..60441 1.0000 35 complement(612544..61335 1.0000 35 complement(613448..61464 1.0000 35 complement(614717..61538 1.0000 35 complement(617463..61855 1.0000 35 complement(623175..62459 1.0000 35 complement(630578..63141 1.0000 35 complement(631504..63251 1.0000 35 complement(632526..63344 1.0000 35 complement(652738..65441 1.0000 35 complement(664881..66595 1.0000 35 complement(739495..73981 1.0000 35 complement(771128..77196 1.0000 35 complement(785737..78626 1.0000 35 complement(802151..80290 1.0000 35 complement(824994..82579 1.0000 35 complement(834881..83625 1.0000 35 complement(837376..83817 1.0000 35 complement(848240..84881 1.0000 35 complement(852252..85380 1.0000 35 complement(854109..85568 1.0000 35 complement(897258..89824 1.0000 35 complement(901996..90402 1.0000 35 complement(938169..93878 1.0000 35 complement(939104..93991 1.0000 35 complement(944817..94579 1.0000 35 complement(954449..95659 1.0000 35 complement(959095..96006 1.0000 35 complement(965100..96629 1.0000 35 complement(78958..79794) 1.0000 35 complement(79988..81145) 1.0000 35 complement(997843..99809 1.0000 35 complement(998200..99893 1.0000 35 complement(1005172..1006 1.0000 35 complement(1013027..1014 1.0000 35 complement(1019608..1020 1.0000 35 complement(1035848..1036 1.0000 35 complement(1037557..1038 1.0000 35 complement(1045281..1046 1.0000 35 complement(1047242..1047 1.0000 35 complement(1048908..1049 1.0000 35 complement(1052902..1055 1.0000 35 complement(1055927..1057 1.0000 35 complement(1062092..1063 1.0000 35 complement(1070462..1071 1.0000 35 complement(1071545..1072 1.0000 35 complement(1083764..1084 1.0000 35 complement(92406..94217) 1.0000 35 complement(1096067..1099 1.0000 35 complement(1116222..1117 1.0000 35 complement(1121859..1122 1.0000 35 complement(1126314..1127 1.0000 35 complement(1137201..1138 1.0000 35 complement(102359..10329 1.0000 35 complement(1165492..1165 1.0000 35 complement(1165895..1167 1.0000 35 complement(1167558..1169 1.0000 35 complement(1169951..1170 1.0000 35 complement(1170689..1171 1.0000 35 complement(1171284..1171 1.0000 35 complement(103567..10518 1.0000 35 complement(1171869..1172 1.0000 35 complement(1172599..1173 1.0000 35 complement(1173860..1176 1.0000 35 complement(1176739..1178 1.0000 35 complement(1178765..1180 1.0000 35 complement(1180999..1181 1.0000 35 complement(1185467..1186 1.0000 35 complement(1187140..1187 1.0000 35 complement(1187886..1188 1.0000 35 complement(1193130..1194 1.0000 35 complement(1195040..1195 1.0000 35 complement(1195519..1195 1.0000 35 complement(1196144..1196 1.0000 35 complement(1196819..1197 1.0000 35 complement(1197598..1198 1.0000 35 complement(1198206..1198 1.0000 35 complement(1198619..1199 1.0000 35 complement(1199255..1199 1.0000 35 complement(1199685..1199 1.0000 35 complement(1199858..1200 1.0000 35 complement(1200596..1201 1.0000 35 complement(1201342..1201 1.0000 35 complement(1201732..1202 1.0000 35 complement(1202153..1202 1.0000 35 complement(1202929..1203 1.0000 35 complement(1203457..1203 1.0000 35 complement(1203978..1204 1.0000 35 complement(1204223..1204 1.0000 35 complement(1204984..1205 1.0000 35 complement(1206124..1206 1.0000 35 complement(1211586..1212 1.0000 35 complement(1220533..1221 1.0000 35 complement(1237650..1238 1.0000 35 complement(1239037..1239 1.0000 35 complement(1241640..1242 1.0000 35 complement(1246772..1248 1.0000 35 complement(112379..11275 1.0000 35 complement(1264728..1266 1.0000 35 complement(114843..11613 1.0000 35 complement(1298841..1300 1.0000 35 complement(1303384..1304 1.0000 35 complement(1319680..1320 1.0000 35 complement(1324433..1325 1.0000 35 complement(1332908..1333 1.0000 35 complement(1333982..1334 1.0000 35 complement(1345376..1347 1.0000 35 complement(1351930..1352 1.0000 35 complement(1355495..1355 1.0000 35 complement(1357187..1357 1.0000 35 complement(1357918..1358 1.0000 35 complement(1358965..1359 1.0000 35 complement(1360769..1361 1.0000 35 complement(1382288..1383 1.0000 35 complement(1383519..1384 1.0000 35 complement(1386628..1387 1.0000 35 complement(1390681..1391 1.0000 35 complement(1391922..1392 1.0000 35 complement(1413068..1413 1.0000 35 complement(1427328..1428 1.0000 35 complement(1432118..1432 1.0000 35 complement(1434134..1434 1.0000 35 complement(1449335..1450 1.0000 35 complement(1450080..1450 1.0000 35 complement(1450821..1451 1.0000 35 complement(1451599..1452 1.0000 35 complement(1452900..1453 1.0000 35 complement(1483215..1484 1.0000 35 complement(1492959..1494 1.0000 35 complement(1496000..1496 1.0000 35 complement(1503584..1503 1.0000 35 complement(1509644..1510 1.0000 35 complement(1515298..1517 1.0000 35 complement(1517804..1518 1.0000 35 complement(1522841..1523 1.0000 35 complement(1528842..1529 1.0000 35 complement(1536529..1537 1.0000 35 complement(141962..14282 1.0000 35 complement(1539705..1540 1.0000 35 complement(142841..14303 1.0000 35 complement(1545745..1546 1.0000 35 complement(1546236..1546 1.0000 35 complement(1549566..1550 1.0000 35 complement(1550718..1552 1.0000 35 complement(1552231..1553 1.0000 35 complement(1559357..1559 1.0000 35 complement(1561189..1562 1.0000 35 complement(1566199..1568 1.0000 35 complement(144841..14564 1.0000 35 complement(1583576..1584 1.0000 35 complement(1593054..1594 1.0000 35 complement(1594978..1596 1.0000 35 complement(1596893..1598 1.0000 35 complement(1601836..1602 1.0000 35 complement(1608352..1609 1.0000 35 complement(1611425..1612 1.0000 35 complement(1613728..1614 1.0000 35 complement(1619439..1620 1.0000 35 complement(1625580..1625 1.0000 35 complement(1626220..1627 1.0000 35 complement(1640126..1640 1.0000 35 complement(1650808..1651 1.0000 35 complement(1655929..1658 1.0000 35 complement(1658686..1659 1.0000 35 complement(1659277..1659 1.0000 35 complement(1660129..1660 1.0000 35 complement(1664880..1665 1.0000 35 complement(1665641..1666 1.0000 35 complement(1671177..1672 1.0000 35 complement(1672641..1673 1.0000 35 complement(1673282..1673 1.0000 35 complement(1673579..1674 1.0000 35 complement(1695120..1695 1.0000 35 complement(1697464..1698 1.0000 35 complement(155337..15613 1.0000 35 complement(1699438..1700 1.0000 35 complement(1705648..1706 1.0000 35 complement(158087..15840 1.0000 35 complement(1744787..1746 1.0000 35 complement(1756649..1757 1.0000 35 complement(163200..16395 1.0000 35 complement(164129..16540 1.0000 35 complement(1811068..1812 1.0000 35 complement(1813286..1814 1.0000 35 complement(1815469..1815 1.0000 35 complement(1816848..1818 1.0000 35 complement(1819575..1820 1.0000 35 complement(1823172..1823 1.0000 35 complement(1828730..1830 1.0000 35 complement(1834997..1836 1.0000 35 complement(1839217..1840 1.0000 35 complement(1841424..1842 1.0000 35 complement(1848811..1849 1.0000 35 complement(1849907..1850 1.0000 35 complement(1856429..1857 1.0000 35 complement(1857517..1858 1.0000 35 complement(1858715..1861 1.0000 35 complement(1861801..1863 1.0000 35 complement(1867055..1868 1.0000 35 complement(1875820..1878 1.0000 35 complement(169787..17059 1.0000 35 complement(1881389..1882 1.0000 35 complement(1883870..1884 1.0000 35 complement(1895487..1896 1.0000 35 complement(1897899..1899 1.0000 35 complement(1899889..1900 1.0000 35 complement(1902159..1902 1.0000 35 complement(1903061..1903 1.0000 35 complement(1903948..1904 1.0000 35 complement(1904485..1905 1.0000 35 complement(1905509..1906 1.0000 35 complement(1912354..1913 1.0000 35 complement(1919186..1920 1.0000 35 complement(1920554..1922 1.0000 35 complement(1922351..1923 1.0000 35 complement(1929466..1931 1.0000 35 complement(174196..17507 1.0000 35 complement(175123..17653 1.0000 35 complement(202482..20427 1.0000 35 complement(212655..21348 1.0000 35 complement(217500..21978 1.0000 35 complement(226853..22847 1.0000 35 complement(237779..23913 1.0000 35 complement(242189..24482 1.0000 35 complement(14702..15538) 1.0000 35 complement(15732..16889) 1.0000 35 complement(286984..28866 1.0000 35 complement(289325..29041 1.0000 35 complement(293566..29550 1.0000 35 complement(295646..29699 1.0000 35 complement(308047..30922 1.0000 35 complement(309389..31043 1.0000 35 complement(313781..31445 1.0000 35 complement(315081..31579 1.0000 35 complement(357702..35918 1.0000 35 complement(374033..37443 1.0000 35 complement(28150..29961) 1.0000 35 complement(390526..39136 1.0000 35 complement(401649..40214 1.0000 35 complement(405002..40545 1.0000 35 complement(410230..41120 1.0000 35 complement(418553..41914 1.0000 35 complement(430373..43129 1.0000 35 complement(38103..39035) 1.0000 35 complement(39311..40924) 1.0000 35 complement(451802..45217 1.0000 35 complement(457001..45789 1.0000 35 complement(465334..46611 1.0000 35 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme NC_014222.fasta -dna -oc . -nostatus -time 18000 -maxsize 60000 -mod oops -nmotifs 1 -minw 4 -maxw 50 model: mod= oops nmotifs= 1 evt= inf object function= E-value of product of p-values width: minw= 4 maxw= 35 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 254 maxsites= 254 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 8890 N= 254 strands: + sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.425 C 0.070 G 0.154 T 0.351 Background letter frequencies (from dataset with add-one prior applied): A 0.425 C 0.070 G 0.154 T 0.351 ******************************************************************************** ******************************************************************************** MOTIF 1 MEME width = 21 sites = 254 llr = 1238 E-value = 1.0e-159 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A 5544654444452:2:64644 pos.-specific C :111111:1:11:::::1:11 probability G 111111111111791921:1: matrix T 4444334544431:7125355 bits 3.8 3.5 3.1 2.7 Relative 2.3 * * Entropy 1.9 * * (7.0 bits) 1.5 * * 1.2 ** * 0.8 ** * 0.4 **** 0.0 --------------------- Multilevel AAAAAATTAAAAGGTGATATT consensus TTTTTTAATTTT GATAA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------------- complement(158087..15840 14 5.20e-09 AGATTATATG AAATACCTTTTAGGTGGTATT C complement(309389..31043 14 1.63e-07 AAATTAAAAA ACCTACCTATTAGGTGAAAAT A complement(390526..39136 15 2.85e-07 TAAACAACCA ATACACTTATAAGGTGAAAAT complement(1193130..1194 15 4.82e-07 TGAAACACAA AATTAATTTATCGGTGGTTTT complement(1176739..1178 13 4.82e-07 TAATTAAAAA ATTTACCTCATAGGTGAAAAT TT complement(1360769..1361 15 1.24e-06 AGTTTCAATA TTTTAATTATTAGGTGATAAT complement(1816848..1818 15 2.83e-06 TTAAAAACGT AAAAAATAATGAGGTGATATC complement(1559357..1559 13 2.83e-06 AATTATGGGT TAATAATATATAGGTGGTAAT AG complement(1047242..1047 15 2.83e-06 TTTATGTTTA TATTAATTTTAAGGTGATTTT complement(1211586..1212 15 4.11e-06 ATATCAATAA AACGATTTAATCGGTGATAAC complement(410230..41120 15 5.82e-06 AAATAGTAAA ATAAAATTTAACGGTGAAATA complement(1895487..1896 15 5.82e-06 TAAATAACGT AATAACAAAACTGGTGATATT complement(1640126..1640 15 5.82e-06 ATACAATTTA AAACCAGATTATGGTGATATT complement(1699438..1700 15 8.08e-06 AAAAATCGAT AATTATCAATAAGGTGAAAAT complement(1298841..1300 15 8.08e-06 TATTTATATG TAATAATTAATTGGTGAAATT complement(954449..95659 15 8.08e-06 AAGTTAATAT AATAATTAATTCGGTGATTTT complement(614717..61538 15 1.10e-05 AAATTTATAA AATTAATCTATTGGTGAAATT complement(418553..41914 15 1.47e-05 CCATATCGAT ATTAACCACAAAGGTGAAAAA complement(1744787..1746 15 1.47e-05 TTTACTAAAT AAATACGATAATGGTGATATT complement(1673282..1673 15 1.47e-05 AATAATAATT TATAATTATTTTGGTGGAATT complement(163200..16395 14 1.94e-05 TTGTTGAACT TAAAAATTTAAAGGTGAGATT A complement(1608352..1609 15 1.94e-05 AATCAAAGAT ATAATATATTTTGGTGATAAT complement(144841..14564 15 1.94e-05 ATAAATTTAT TCCGAATACACAGGTGATAAC complement(1246772..1248 15 1.94e-05 TATGTATAAA AAACAACTTATTGGTGTTAAA complement(1178765..1180 14 1.94e-05 AAAAGTTAAT TTGAACTTTAAAGGTGAAAAC C complement(998200..99893 15 1.94e-05 TAATAGTAAT ACTAATAATAAAGGTGATAAT complement(1856429..1857 15 2.52e-05 TACTAAATGT ATATCATAAAAAGGTGAATTT complement(1811068..1812 15 2.52e-05 AACATTTTAG TTAAAATAAAATGGTGAAATT complement(1658686..1659 14 2.52e-05 AACTAAAACT TTTAAAGTATGAGGTGATATC T complement(1566199..1568 15 2.52e-05 TTAACCAATA TTTTATTTAGTCGGTGATTAT complement(112379..11275 15 2.52e-05 GTTATGATAA AAATAATTATTTGGTGAAAAA complement(48123..48503) 15 2.52e-05 GTTATGATAA AAATAATTATTTGGTGAAAAA complement(405002..40545 15 3.22e-05 ATAAAAATAT AAAAATATATATGGTGAAATT complement(1815469..1815 15 3.22e-05 AATTAGAATT TATAATAATTGCGGTGATATA complement(1549566..1550 15 3.22e-05 TCAATATCTT ATAAAATTTTAAGGTGGTATG complement(1237650..1238 15 3.22e-05 TTATATGTGG TATTAATTAAAAGGTGATTTA complement(1083764..1084 14 3.22e-05 CACAATGATA ATTTATAATTTTGGTGGAACC T complement(997843..99809 14 3.22e-05 AATATTTTAT ATAATCCATTTTGGTGAAATA A complement(1449335..1450 15 4.08e-05 ATAAAGTAAG TTTATTATTATCGGTGAAATT complement(1005172..1006 15 4.08e-05 CATATGAATA TATCATAATACTGGTGATAAA complement(802151..80290 15 4.08e-05 TTTAAAATAT AATCATAATGCTGGTGATTAT complement(465334..46611 15 5.11e-05 TAACCAAAAA ATTAATTTTAAAGGTGTAATT complement(785737..78626 15 5.11e-05 ATTTTAAAAT TATCAAATCTAAGGTGTAAAT complement(630578..63141 15 5.11e-05 ATTACTATGG ATTATCATATATGGTGATATA complement(1126314..1127 15 6.33e-05 AAATTTTATA ATCAATATATTAGGTGTAATT complement(1045281..1046 11 6.33e-05 AAAGTCAAGA AACCACTATTTTGGAGGAAAA AAAC complement(1037557..1038 15 6.33e-05 CAAAAATAGG AATTCATATTGAGGTGTAACC complement(1660129..1660 15 7.76e-05 AGATAACTAA AAATAAAAATATGGTGTTATT complement(1861801..1863 15 9.44e-05 TCATAAAAAT TATTTATCAATCGGTGAAACT complement(1841424..1842 15 9.44e-05 AATACATTTT ATTTTAAATATTGGTGATAAA complement(1665641..1666 15 9.44e-05 TCTATTTTAA AGATAACTAATAGGTGTAATT complement(1332908..1333 15 9.44e-05 ATTAATTTAC AAATGCTATTTAGGGGATAAT complement(1173860..1176 15 9.44e-05 TATAATTTAA ATTCATATTCTGGGTGAAAAA complement(1167558..1169 15 9.44e-05 ATCAAAAACA TATATAAATACAGGTGACAAT complement(174196..17507 15 1.14e-04 AATAAAAAAT AAATTAAATATTGGTGGTAAA complement(1883870..1884 15 1.14e-04 ATATAAAACT AAATAATTCTTTGGTGTATTT complement(1858715..1861 15 1.14e-04 TATAGTTGAC AGTTCTTTTTTAGGTGTCATT complement(1204223..1204 15 1.14e-04 ATAAACACCA AATACATAAAAAGGTGGTAAG complement(295646..29699 15 1.36e-04 TTTGTTTATT AATTTGATTATTGGTGATATT complement(1171284..1171 15 1.36e-04 ATTATGAATA TTCTAAGTCATAGGTGATTAA complement(1819575..1820 15 1.62e-04 CTTTGAAAAA CGTATACATTTTGGTGAAATT complement(1319680..1320 15 1.62e-04 TAATATAATG TTAGGATTATTTGGTGAAATT complement(1202153..1202 14 1.62e-04 ACAAGAATAA TTCCTTTAAATGGGTGAATAT C complement(1062092..1063 15 1.62e-04 TCAAATATAA TACCATTATTGAGGCGGTATT complement(357702..35918 15 1.92e-04 CGTATAATAA ATTGTTAATATTGGTGAAATC complement(1922351..1923 15 1.92e-04 AAATAAAATA TTCTAAATAATTGGTGTAATA complement(1619439..1620 15 1.92e-04 AACATATATA TTATTAGATATCGGTGATTAT complement(965100..96629 15 1.92e-04 ATATATTACA AGTTAATAATAAGGTGAGTTT complement(543168..54415 12 1.92e-04 TATTTAAAAT TATCAACAATACGGGGGTGCT AAA complement(1867055..1868 15 2.25e-04 TACGCATTTA AATTTAAAAATAGGTGAACTT complement(1601836..1602 15 2.25e-04 ATATTATAAT TATTATGTATAAGGTGAAAAA complement(1593054..1594 15 2.25e-04 TAAAATTAAA AACCTCTGTTGAGGTGTATTT complement(1515298..1517 15 2.25e-04 TTATATTAGA GAAACCTTTAGAGGTGTAATT complement(1198206..1198 15 2.25e-04 TACGTCTGAA AATGTAAAGACAGGTGATATT complement(1195519..1195 14 2.25e-04 TATAGTTAGA TTTGTAATTTAAGGTGGTCTT A complement(313781..31445 15 2.63e-04 AAAAATCTAA AAATACTATGATGGTGAGTAA complement(1546236..1546 15 2.63e-04 TTATTTTTAA ACACATAAACTTGGTGTAATT complement(1201732..1202 15 2.63e-04 ATCGAGTCAC AAAAATAAGTAAGGTGGAATA complement(226853..22847 15 3.06e-04 AATTATCATA TATTTATACTACGGTGAAAGA complement(1813286..1814 15 3.06e-04 TAATTATGTT GATGATTATAAAGGTGATTTT complement(1561189..1562 14 3.06e-04 ATTTCGGATG AATTTATTAAGAGGTGTATTT A complement(1357187..1357 6 3.06e-04 ACTAA AAATTATTTAATGGTGTATTT ATGAGTAAT complement(1035848..1036 15 3.06e-04 GATATTAACC AAGTAATTTGACGGTGATTAG complement(631504..63251 15 3.06e-04 GTAAAAATAA AAATTTTATTTTGGTGTAAAT complement(1857517..1858 15 3.55e-04 AAAATTTAAA TAATATGTATAAGGTGTAATT complement(1351930..1352 15 3.55e-04 AATTACTTAA TCATATATATAAGGTGGTCAA complement(1198619..1199 15 3.55e-04 AAAAAGCAGG TAAGGTATTATAGGTGGTTTC complement(1196819..1197 15 3.55e-04 AGAAAAAATC CTTAGCTTGTAAGGTGATAAA complement(1187886..1188 15 3.55e-04 TTATAAAAAT TTGGGCTAATTTGGTGAAATT complement(374033..37443 15 4.09e-04 AAATCTATAT TTTACCGTTTGAGGTGTTTTA complement(1839217..1840 15 4.09e-04 CTTAAATACT ATATTATTGTGAGGAGATATT complement(1509644..1510 15 4.09e-04 GGAATTTCTA TAACTTATAAGAGGTGTTTTT complement(1199858..1200 13 4.09e-04 TATGGAAGTA CTTGAAGAATAAGGTGATTAT TT complement(1171869..1172 13 4.09e-04 AACTTAAACA AAGAATAATTCAGGTGATGTT TT complement(28150..29961) 15 4.70e-04 ATCCATATTT TTTTATTTTAGAGGAGATTTA complement(315081..31579 15 4.70e-04 TGTACAAAAT TACAGAAATCACGGTGTAATT complement(1848811..1849 15 4.70e-04 AGATTAAAAG TAATTCAATTATGGTGATGAT complement(164129..16540 15 4.70e-04 AATTAAATTA AAATAAATTAAAAGTGAAAAT complement(1427328..1428 15 4.70e-04 AAAGTTTAAT TTTATTTAATTTGGTGAGATA complement(92406..94217) 15 4.70e-04 ATCCATATTT TTTTATTTTAGAGGAGATTTA complement(837376..83817 15 4.70e-04 GCTACATTAA ACTACAATAATCGGTGTTCAA complement(1929466..1931 14 5.38e-04 CAATAACTCA ATAAAACAAATATGTGATAAT T complement(1697464..1698 8 5.38e-04 CACTTAT TGTCAATCAATGGGTGTAAAC TTTATTT complement(1496000..1496 15 5.38e-04 CAATATATGA AAAAGGATATATGGTGATAAT complement(1452900..1453 13 5.38e-04 AGTAGACTTA CTAAAATACCTCGGAGGTATA GT complement(1202929..1203 12 5.38e-04 TATACAAATA CACTCTATATCTGGAGGTATA ATA complement(1196144..1196 15 5.38e-04 TAATGCCTAT AAAAAGGTCAATGGTGAAAAC complement(1169951..1170 15 5.38e-04 AATTAAATCA CTTATTTGATTCGGTGAAATA complement(623175..62459 15 5.38e-04 GAATTTGTTA AAAGCTTTGTAAGGGGAAAAT complement(212655..21348 15 6.15e-04 AAATTAATTT TAGTGATGTTTTGGTGATATA complement(897258..89824 15 6.15e-04 ATTATGAATA CGAACATTAAACGGTGAAGTT complement(308047..30922 12 7.00e-04 GAATTATACG ACTAATAAAATAGGTGTTTAA ATT complement(1902159..1902 12 7.00e-04 GAATAAATTA TAAAATAAAATAGGGGAATAC TGT complement(1655929..1658 15 7.00e-04 ATAATTATTT ATTCAAAATAAAAGGGATAAT complement(1650808..1651 15 7.00e-04 GATTTGGATG TTTAAGGACTATGGTGGAAAT complement(1137201..1138 14 7.00e-04 GTTATATGTA GATTACCCCGGAGGTGACCAT T complement(594626..59488 15 7.00e-04 AGATATAATA AAAACTTATAAAAGTGATTTT complement(1912354..1913 12 7.94e-04 GAAAAGTCAT ATGACAATTACAGGAGGCTAC ACA complement(1345376..1347 15 7.94e-04 GAATAATAGA ACTTCCATTGTTTGTGATACT complement(854109..85568 15 7.94e-04 AAATAAGGGA TACCGACTAATTCGTGGTAAA complement(293566..29550 15 9.00e-04 AGGATAAAAA ATTCTTGCTTATGGTGGTAGA complement(237779..23913 13 9.00e-04 ACGTCTAAAT TTAATATTTTATGGAGGAAAA AC complement(1919186..1920 15 9.00e-04 ATTGTCAAAT GTCTAATTACAAGGTGTTTTA complement(1386628..1387 15 9.00e-04 TAATCCAGTA TAAATTCTTAAAAGTGAAATC complement(1355495..1355 15 9.00e-04 AAGATTTTTG TAATTGTAATTTGGTGAATAT complement(771128..77196 15 9.00e-04 AATATTTAAC TGCATATTTAATGGTGATTTG complement(1903948..1904 14 1.02e-03 AACTTATATT ATACGTAATATAGGTGAGAGA T complement(1875820..1878 15 1.02e-03 AGTTATTCTA AGAATTAAAAAAGGTGATTTA complement(1264728..1266 12 1.02e-03 TGAAAAGGTA ATAAATTGATTTGGTGACGAT AAT complement(1201342..1201 15 1.02e-03 TTAAAAACGC TAATAAATAAGAGGTGTGAGC complement(1121859..1122 14 1.02e-03 TTAACTGTAA AAAACTACAATTGGTGAGTTA A complement(1849907..1850 14 1.15e-03 CATAAATACA TAATCTCAGGAAGGAGATAAA A complement(1823172..1823 15 1.15e-03 TTGAAAATAA TATCAAAAGTTGCGTGAAATT complement(1187140..1187 13 1.15e-03 AAATCACAAA GTAAAATTAAAAGGTGTTTAA AT complement(1904485..1905 14 1.29e-03 GAAGTAAATT ATTAGTATTTGAGGTGTACTT T complement(1492959..1494 15 1.29e-03 ATTTGACTTC AATATGAATTATGGAGATATT complement(938169..93878 15 1.29e-03 ATGCAGTAAT GCAAGCAAAAACGGTGAAACA complement(39311..40924) 11 1.45e-03 AATTAATTCA ATTTTTTATATTGGAGGATTA AAAT complement(15732..16889) 15 1.45e-03 ATGGAAAAAC ACAGAATTAGAGAGTGAAATC complement(1881389..1882 15 1.45e-03 TTATTCATAT GTTATAGAATTTGGTGAATTT complement(103567..10518 11 1.45e-03 AATTAATTCA ATTTTTTATATTGGAGGATTA AAAT complement(79988..81145) 15 1.45e-03 ATGGAAAAAC ACAGAATTAGAGAGTGAAATC complement(959095..96006 12 1.45e-03 TAATTTAAAA ACATCTCATTGTAGGGATAAT AAT complement(457001..45789 15 1.63e-03 ATTAAAAATA ATTAAAAATGAGCGTGATAAA complement(1626220..1627 15 1.63e-03 TAAGCTTATA ATGAAACAGCGAGGAGAAACT complement(1613728..1614 15 1.63e-03 TTATATTTTT AAAAATTTTGTGGGCGATACA complement(1203978..1204 15 1.63e-03 AGAACGTTGT ATCAAAACGAGAGGTGCATTA complement(1116222..1117 15 1.63e-03 TCTTATTATT AAGTATTAGTATGGTGTCTAT complement(739495..73981 13 1.63e-03 GTACTTTTGA AAAGGCTTAGAAGGTGGGGTT AA complement(1899889..1900 12 1.83e-03 AAATATGTCC AGTAAATGCTTTGGAGGAATA ATA complement(1672641..1673 15 1.83e-03 TAAAATCAAA AAATAATTATGCGGGTGAATT complement(1539705..1540 9 1.83e-03 AGACAATA TTTAAATATTTTGGTGAGTGG ATTAAA complement(1522841..1523 6 1.83e-03 ATTTG AAATAATAATTTGGAGCATTA AGGGATACT complement(1450080..1450 12 1.83e-03 CTTAATTTAT TTTTTATATTGAGGTGGATGG CAC complement(613448..61464 12 1.83e-03 ATATAAAAAT ATAAAAATTATAAGAGGAATT TGA complement(1673579..1674 15 2.04e-03 ATAAAAATGT GATAAATAAAAATGTGATATT complement(1450821..1451 14 2.04e-03 CCTCATTTTA AAAAATTTGAGAGGTTATATT T complement(1333982..1334 15 2.04e-03 ATTTATATTT AAGGTAAAATTTGGTGTAATA complement(1483215..1484 13 2.28e-03 TTAATTATAG TATTAGTTTGGCGGAGGGAAA TC complement(1451599..1452 14 2.28e-03 ACAACCTCAA AAAAAACCGAGAGGTTATATT T complement(1695120..1695 12 2.54e-03 TTATGGAAAA GGGCATATATGAGGAGGTAAT ACC complement(1611425..1612 13 2.54e-03 AATTAAAAAT AAAAAATTTAAGGGAGTGAAA CA complement(1545745..1546 15 2.54e-03 ATATTAAAAC TACGAATAGGAAGGTGTCAGA complement(1528842..1529 12 2.54e-03 TATGTTTATA ATTCAACATACGAGGGATTGT AGA complement(1434134..1434 15 2.54e-03 GTCATTGTTA TTATGGATTGTTGGTGTTTTT complement(1204984..1205 15 2.54e-03 TAATGGTGAA TCGTTGAATATTGGTGAAACA complement(1185467..1186 12 2.54e-03 TTTATATTTA TTTTAAACTAAAGGAGGCCAA ATT complement(1172599..1173 13 2.83e-03 CCCCTCTGGA GAAAACTGAGAAGGAGGTAAA TT complement(1165492..1165 15 2.83e-03 TAATAACTAT GTACAATTATTGAGGGAAATT complement(901996..90402 15 2.83e-03 ACTGTAAATA AATGTAAATGCGAGTGATAAT complement(612544..61335 12 2.83e-03 TTAGCTTATT AAATGATTTTAAAGAGGTAAT CCT complement(1920554..1922 15 3.14e-03 AGTATGATAA AATTTAAAATTATGGGATATT complement(1897899..1899 12 3.14e-03 AAAATACATA AATAACGTTAAAAGAGGTTTT GAA complement(1391922..1392 15 3.14e-03 TTATCTTTAT TGACGATTAGAGGGAGTTATT complement(1756649..1757 15 3.49e-03 TCATAATTTA CTAAAATTAAAGAGAGATATT complement(1671177..1672 15 3.49e-03 ATATAATAAT TTAAAAATAATAAGGGATAGT complement(1383519..1384 15 3.49e-03 TAATAATAAT AATAATTTATATGGGTGAATT complement(1241640..1242 12 3.49e-03 CTTATCAGAA TTTTTAAAATTCGGAGGGTGC ATT complement(834881..83625 15 3.49e-03 GACACAATAG TACTATAAAAGAGGCGCAAAT complement(175123..17653 15 3.86e-03 ATATACAATA TGAATAATATGATGTGATATT complement(1199685..1199 12 3.86e-03 ATGAAAGGAT TAGAAAGGACAAGGAGGTAAC AGT complement(1903061..1903 15 4.27e-03 ATCAAACATT ATACATAGAGCGTGTGAAATT complement(155337..15613 14 4.27e-03 AGGATTATTA AAAATACAGAAAGGGGTTTGC A complement(1594978..1596 6 4.27e-03 TATAT TAGTAGATTATTAGTGATATA TAATTATTA complement(142841..14303 15 4.27e-03 AATGCAAGCA AAAGCATAAGGATGTGATTTA complement(1382288..1383 13 4.27e-03 AAAATAAAAT ATTGCGTATACAGGAGGAAGA TT complement(1239037..1239 15 4.27e-03 TTAAGTTTAG TTAATTTAATTGAGGGATATT complement(1197598..1198 12 4.27e-03 TGATTTATAA CTAAAGTTATAAGGAGGAATG GTT complement(1552231..1553 15 4.71e-03 TTATTCAAGA TGTCTTAAAGGATGTGATATT complement(1055927..1057 15 4.71e-03 ATTATCAAAA ATTAATATTTTGAGGGCTAAT complement(944817..94579 6 4.71e-03 ATAAA TAACGAATAAAACGGGATAAA AGGGATATT complement(939104..93991 15 4.71e-03 TTGAATATTA ATAAAATAACTATGTGCAACT complement(652738..65441 3 4.71e-03 GT TATTACATTTTCAGTTGAATT ATGGTGAAGC complement(603659..60441 15 4.71e-03 ATTAAGGATA ATAAACTAAAAGAGGGGACTT complement(38103..39035) 13 5.19e-03 ATTATGAACT ATGAAACTTATAAGAGGATTA TT complement(401649..40214 15 5.19e-03 ACAATAAATA TAATTTAAAGATAGTGGTTAT complement(1432118..1432 3 5.19e-03 TA GTTTAAATTACTGGTTATTAT TTTTGGTGAA complement(114843..11613 13 5.19e-03 TAAAATATGA ATTTTTAGATAGGGTGTGAAA AT complement(102359..10329 13 5.19e-03 ATTATGAACT ATGAAACTTATAAGAGGATTA TT complement(664881..66595 9 5.19e-03 TGCAGTAA ATCAAAAAAGCACGAGGTAGC GATACT complement(50587..51882) 13 5.19e-03 TAAAATATGA ATTTTTAGATAGGGTGTGAAA AT complement(1596893..1598 15 5.71e-03 AAAGCTAAAA AGTAAAATAACAAGTGATTTG complement(1199255..1199 12 5.71e-03 GTATTTTCAT ACGATAAGACGAGGAGGTATA GTT complement(1834997..1836 5 6.27e-03 TATA AATTTAATTTTACCTGATAAT GAGGGAAAAA complement(617463..61855 15 6.27e-03 TTTATAAAAA TTTATAAAAATTTGTGAAAAA complement(202482..20427 9 6.87e-03 AAGATTGA TTGGTAATAAATGGAGATTGT AAACAC complement(1165895..1167 12 6.87e-03 TAAATTCATT ACATATCATAAATGAGGCAAA ATT complement(1019608..1020 15 6.87e-03 AGAGTGATTC AGAATTATATAGAGTGATTAT complement(852252..85380 15 6.87e-03 TATTTATTCA ATTTAGGTATTGCGTGAAAAA complement(848240..84881 15 6.87e-03 AAGGACAGGA TAAAAAGGATAAAGGGATAAT complement(141962..14282 5 7.52e-03 CTTA ATTTATTTTAAATGTGCCTGC GAGGTAAATT complement(1303384..1304 5 7.52e-03 TATT AAATTATTTATGCGAGTTAAT TATATTGGTG complement(78958..79794) 5 7.52e-03 CTTA ATTTATTTTAAATGTGCCTGC GAGGTAAATT complement(242189..24482 14 8.21e-03 ATAATATTAA TAATAAAAATAAGGGTAATAC A complement(1413068..1413 15 8.21e-03 AAACAAAATA TTGACTACAGTGAGTGATAAA complement(451802..45217 14 8.95e-03 AAATTTATTT GAAAATAGGAAAGGTGAGTAA T complement(1203457..1203 14 8.95e-03 ACCCTCAAGC CTTTATTTGGGTAGGGACACC C complement(1200596..1201 12 8.95e-03 AACAAGAACC CTAAAAAGATTAGGAGGGCAA AAT complement(1180999..1181 14 8.95e-03 ATAATTCTAT TAAACAAAAATGAGGGAGATA T complement(632526..63344 12 8.95e-03 AATATAATTT GAACAATTAAAAGAAGGTATT TTT complement(1358965..1359 14 9.74e-03 AATGGAATAT ATAACTTAAGTAGGTTAGTAA T complement(824994..82579 14 9.74e-03 AAATTTTGAA AGTAGTGTATTGGGAGATTAA C complement(430373..43129 9 1.06e-02 ATGGATAT TACGACTATATTAGGGCTTGT GATACT complement(542844..54314 12 1.06e-02 TAAAGTTTAT AGTAAAAATAACGGATGTAAA AAT complement(1625580..1625 6 1.15e-02 ATAAA AAATAATACTAAGGATAATAA TCAAAATTA complement(1550718..1552 13 1.24e-02 TTAATAAGAT ACTCTTCTTATTAGAGGTGCA AT complement(1324433..1325 13 1.34e-02 AACAAAACTT CTATAAAAATTAGGTTGATAG AT complement(1052902..1055 14 1.56e-02 CTTAAAAATT ATTTATAAGCGTAGTGATTAG A complement(1013027..1014 15 1.56e-02 ATTTATATTT AAGCGACGAAAGAGGGAAAAA complement(169787..17059 13 1.81e-02 TCTTGGAAAA TAAGAAAGTAATTGAGGTATA TC complement(1206124..1206 2 1.94e-02 T ATACAATATGAAGCTTTAACC TATTGAGGTG complement(594910..59587 10 1.94e-02 GTAATTTGG TGGTAATAGGGAGGGTGTAAT GTAAA complement(1357918..1358 8 2.23e-02 ACCTAAT AACAGAAATTTAAGAGAGGAT TGATAAT complement(286984..28866 15 2.39e-02 AGATATAATT TTAGCAATTGGAAATGATAAT complement(1905509..1906 12 2.39e-02 TCAGCACCGA TAGAAAAGTAGAGGGGTTGAG ATT complement(1583576..1584 12 2.39e-02 CATTTATGAA ATAAAATTTATTTATGAAATA AAT complement(1096067..1099 12 2.39e-02 AAATAATAAT AAAATAATAAAAAGAGTTGTT AAT complement(1390681..1391 15 2.56e-02 TTATAATTTT AAATTATTCATCTGGTGAATT complement(1536529..1537 2 2.92e-02 T AATTATTTTTAAAAGGAATTT GTAAGTTCCT complement(1503584..1503 11 2.92e-02 CTGTAATTGG TATTTTAATAATGGAGTAGAG CATT complement(1828730..1830 14 4.26e-02 TTATTATGTA TAAAAATTCAAAAAGGACAAA T complement(1220533..1221 15 4.52e-02 TGTTAATCGA TTTATTCAATTATCGGATTTA complement(1517804..1518 14 4.80e-02 AATTTTAAAT TTTTAACTTTTTTAAGCTATC G complement(1664880..1665 2 6.40e-02 A AAAATTATTTATTGATATTTT AAAATATCAT complement(1071545..1072 3 7.14e-02 AT ATTTTGGAAGATACTGAAACA AGAAATAGGA complement(14702..15538) 14 7.53e-02 ATCGACAGTC TACTAATTTTAATCTTTAAAT T complement(1195040..1195 13 1.07e-01 TTTAAATCTC ACAAATTTACAATATGTATCA TA complement(1070462..1071 14 1.12e-01 TTAATAAACA ATCTTAAATAATAATTACAAT T complement(1659277..1659 2 1.17e-01 A TATATATTATTCAATTAATAT TCATAATTTT complement(289325..29041 14 1.40e-01 AGTAATATTT TAAAATAATATAAATTATTTA A complement(1048908..1049 4 1.46e-01 TAA TTAACATACTTAACATACTTA ACATACTTAA complement(1705648..1706 15 1.71e-01 TGTAATTAAA AAAAATCCAAAATCTTGGTAA complement(1170689..1171 8 1.71e-01 TCGGAAA AACAAAATCACAAATCACAAA AACAACA complement(217500..21978 8 2.36e-01 ATAACTA AACTAATACTAAAATAATAAA ATAATTA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- complement(158087..15840 5.2e-09 13_[+1]_1 complement(309389..31043 1.6e-07 13_[+1]_1 complement(390526..39136 2.8e-07 14_[+1] complement(1193130..1194 4.8e-07 14_[+1] complement(1176739..1178 4.8e-07 12_[+1]_2 complement(1360769..1361 1.2e-06 14_[+1] complement(1816848..1818 2.8e-06 14_[+1] complement(1559357..1559 2.8e-06 12_[+1]_2 complement(1047242..1047 2.8e-06 14_[+1] complement(1211586..1212 4.1e-06 14_[+1] complement(410230..41120 5.8e-06 14_[+1] complement(1895487..1896 5.8e-06 14_[+1] complement(1640126..1640 5.8e-06 14_[+1] complement(1699438..1700 8.1e-06 14_[+1] complement(1298841..1300 8.1e-06 14_[+1] complement(954449..95659 8.1e-06 14_[+1] complement(614717..61538 1.1e-05 14_[+1] complement(418553..41914 1.5e-05 14_[+1] complement(1744787..1746 1.5e-05 14_[+1] complement(1673282..1673 1.5e-05 14_[+1] complement(163200..16395 1.9e-05 13_[+1]_1 complement(1608352..1609 1.9e-05 14_[+1] complement(144841..14564 1.9e-05 14_[+1] complement(1246772..1248 1.9e-05 14_[+1] complement(1178765..1180 1.9e-05 13_[+1]_1 complement(998200..99893 1.9e-05 14_[+1] complement(1856429..1857 2.5e-05 14_[+1] complement(1811068..1812 2.5e-05 14_[+1] complement(1658686..1659 2.5e-05 13_[+1]_1 complement(1566199..1568 2.5e-05 14_[+1] complement(112379..11275 2.5e-05 14_[+1] complement(48123..48503) 2.5e-05 14_[+1] complement(405002..40545 3.2e-05 14_[+1] complement(1815469..1815 3.2e-05 14_[+1] complement(1549566..1550 3.2e-05 14_[+1] complement(1237650..1238 3.2e-05 14_[+1] complement(1083764..1084 3.2e-05 13_[+1]_1 complement(997843..99809 3.2e-05 13_[+1]_1 complement(1449335..1450 4.1e-05 14_[+1] complement(1005172..1006 4.1e-05 14_[+1] complement(802151..80290 4.1e-05 14_[+1] complement(465334..46611 5.1e-05 14_[+1] complement(785737..78626 5.1e-05 14_[+1] complement(630578..63141 5.1e-05 14_[+1] complement(1126314..1127 6.3e-05 14_[+1] complement(1045281..1046 6.3e-05 10_[+1]_4 complement(1037557..1038 6.3e-05 14_[+1] complement(1660129..1660 7.8e-05 14_[+1] complement(1861801..1863 9.4e-05 14_[+1] complement(1841424..1842 9.4e-05 14_[+1] complement(1665641..1666 9.4e-05 14_[+1] complement(1332908..1333 9.4e-05 14_[+1] complement(1173860..1176 9.4e-05 14_[+1] complement(1167558..1169 9.4e-05 14_[+1] complement(174196..17507 0.00011 14_[+1] complement(1883870..1884 0.00011 14_[+1] complement(1858715..1861 0.00011 14_[+1] complement(1204223..1204 0.00011 14_[+1] complement(295646..29699 0.00014 14_[+1] complement(1171284..1171 0.00014 14_[+1] complement(1819575..1820 0.00016 14_[+1] complement(1319680..1320 0.00016 14_[+1] complement(1202153..1202 0.00016 13_[+1]_1 complement(1062092..1063 0.00016 14_[+1] complement(357702..35918 0.00019 14_[+1] complement(1922351..1923 0.00019 14_[+1] complement(1619439..1620 0.00019 14_[+1] complement(965100..96629 0.00019 14_[+1] complement(543168..54415 0.00019 11_[+1]_3 complement(1867055..1868 0.00023 14_[+1] complement(1601836..1602 0.00023 14_[+1] complement(1593054..1594 0.00023 14_[+1] complement(1515298..1517 0.00023 14_[+1] complement(1198206..1198 0.00023 14_[+1] complement(1195519..1195 0.00023 13_[+1]_1 complement(313781..31445 0.00026 14_[+1] complement(1546236..1546 0.00026 14_[+1] complement(1201732..1202 0.00026 14_[+1] complement(226853..22847 0.00031 14_[+1] complement(1813286..1814 0.00031 14_[+1] complement(1561189..1562 0.00031 13_[+1]_1 complement(1357187..1357 0.00031 5_[+1]_9 complement(1035848..1036 0.00031 14_[+1] complement(631504..63251 0.00031 14_[+1] complement(1857517..1858 0.00035 14_[+1] complement(1351930..1352 0.00035 14_[+1] complement(1198619..1199 0.00035 14_[+1] complement(1196819..1197 0.00035 14_[+1] complement(1187886..1188 0.00035 14_[+1] complement(374033..37443 0.00041 14_[+1] complement(1839217..1840 0.00041 14_[+1] complement(1509644..1510 0.00041 14_[+1] complement(1199858..1200 0.00041 12_[+1]_2 complement(1171869..1172 0.00041 12_[+1]_2 complement(28150..29961) 0.00047 14_[+1] complement(315081..31579 0.00047 14_[+1] complement(1848811..1849 0.00047 14_[+1] complement(164129..16540 0.00047 14_[+1] complement(1427328..1428 0.00047 14_[+1] complement(92406..94217) 0.00047 14_[+1] complement(837376..83817 0.00047 14_[+1] complement(1929466..1931 0.00054 13_[+1]_1 complement(1697464..1698 0.00054 7_[+1]_7 complement(1496000..1496 0.00054 14_[+1] complement(1452900..1453 0.00054 12_[+1]_2 complement(1202929..1203 0.00054 11_[+1]_3 complement(1196144..1196 0.00054 14_[+1] complement(1169951..1170 0.00054 14_[+1] complement(623175..62459 0.00054 14_[+1] complement(212655..21348 0.00061 14_[+1] complement(897258..89824 0.00061 14_[+1] complement(308047..30922 0.0007 11_[+1]_3 complement(1902159..1902 0.0007 11_[+1]_3 complement(1655929..1658 0.0007 14_[+1] complement(1650808..1651 0.0007 14_[+1] complement(1137201..1138 0.0007 13_[+1]_1 complement(594626..59488 0.0007 14_[+1] complement(1912354..1913 0.00079 11_[+1]_3 complement(1345376..1347 0.00079 14_[+1] complement(854109..85568 0.00079 14_[+1] complement(293566..29550 0.0009 14_[+1] complement(237779..23913 0.0009 12_[+1]_2 complement(1919186..1920 0.0009 14_[+1] complement(1386628..1387 0.0009 14_[+1] complement(1355495..1355 0.0009 14_[+1] complement(771128..77196 0.0009 14_[+1] complement(1903948..1904 0.001 13_[+1]_1 complement(1875820..1878 0.001 14_[+1] complement(1264728..1266 0.001 11_[+1]_3 complement(1201342..1201 0.001 14_[+1] complement(1121859..1122 0.001 13_[+1]_1 complement(1849907..1850 0.0011 13_[+1]_1 complement(1823172..1823 0.0011 14_[+1] complement(1187140..1187 0.0011 12_[+1]_2 complement(1904485..1905 0.0013 13_[+1]_1 complement(1492959..1494 0.0013 14_[+1] complement(938169..93878 0.0013 14_[+1] complement(39311..40924) 0.0015 10_[+1]_4 complement(15732..16889) 0.0015 14_[+1] complement(1881389..1882 0.0015 14_[+1] complement(103567..10518 0.0015 10_[+1]_4 complement(79988..81145) 0.0015 14_[+1] complement(959095..96006 0.0015 11_[+1]_3 complement(457001..45789 0.0016 14_[+1] complement(1626220..1627 0.0016 14_[+1] complement(1613728..1614 0.0016 14_[+1] complement(1203978..1204 0.0016 14_[+1] complement(1116222..1117 0.0016 14_[+1] complement(739495..73981 0.0016 12_[+1]_2 complement(1899889..1900 0.0018 11_[+1]_3 complement(1672641..1673 0.0018 14_[+1] complement(1539705..1540 0.0018 8_[+1]_6 complement(1522841..1523 0.0018 5_[+1]_9 complement(1450080..1450 0.0018 11_[+1]_3 complement(613448..61464 0.0018 11_[+1]_3 complement(1673579..1674 0.002 14_[+1] complement(1450821..1451 0.002 13_[+1]_1 complement(1333982..1334 0.002 14_[+1] complement(1483215..1484 0.0023 12_[+1]_2 complement(1451599..1452 0.0023 13_[+1]_1 complement(1695120..1695 0.0025 11_[+1]_3 complement(1611425..1612 0.0025 12_[+1]_2 complement(1545745..1546 0.0025 14_[+1] complement(1528842..1529 0.0025 11_[+1]_3 complement(1434134..1434 0.0025 14_[+1] complement(1204984..1205 0.0025 14_[+1] complement(1185467..1186 0.0025 11_[+1]_3 complement(1172599..1173 0.0028 12_[+1]_2 complement(1165492..1165 0.0028 14_[+1] complement(901996..90402 0.0028 14_[+1] complement(612544..61335 0.0028 11_[+1]_3 complement(1920554..1922 0.0031 14_[+1] complement(1897899..1899 0.0031 11_[+1]_3 complement(1391922..1392 0.0031 14_[+1] complement(1756649..1757 0.0035 14_[+1] complement(1671177..1672 0.0035 14_[+1] complement(1383519..1384 0.0035 14_[+1] complement(1241640..1242 0.0035 11_[+1]_3 complement(834881..83625 0.0035 14_[+1] complement(175123..17653 0.0039 14_[+1] complement(1199685..1199 0.0039 11_[+1]_3 complement(1903061..1903 0.0043 14_[+1] complement(155337..15613 0.0043 13_[+1]_1 complement(1594978..1596 0.0043 5_[+1]_9 complement(142841..14303 0.0043 14_[+1] complement(1382288..1383 0.0043 12_[+1]_2 complement(1239037..1239 0.0043 14_[+1] complement(1197598..1198 0.0043 11_[+1]_3 complement(1552231..1553 0.0047 14_[+1] complement(1055927..1057 0.0047 14_[+1] complement(944817..94579 0.0047 5_[+1]_9 complement(939104..93991 0.0047 14_[+1] complement(652738..65441 0.0047 2_[+1]_12 complement(603659..60441 0.0047 14_[+1] complement(38103..39035) 0.0052 12_[+1]_2 complement(401649..40214 0.0052 14_[+1] complement(1432118..1432 0.0052 2_[+1]_12 complement(114843..11613 0.0052 12_[+1]_2 complement(102359..10329 0.0052 12_[+1]_2 complement(664881..66595 0.0052 8_[+1]_6 complement(50587..51882) 0.0052 12_[+1]_2 complement(1596893..1598 0.0057 14_[+1] complement(1199255..1199 0.0057 11_[+1]_3 complement(1834997..1836 0.0063 4_[+1]_10 complement(617463..61855 0.0063 14_[+1] complement(202482..20427 0.0069 8_[+1]_6 complement(1165895..1167 0.0069 11_[+1]_3 complement(1019608..1020 0.0069 14_[+1] complement(852252..85380 0.0069 14_[+1] complement(848240..84881 0.0069 14_[+1] complement(141962..14282 0.0075 4_[+1]_10 complement(1303384..1304 0.0075 4_[+1]_10 complement(78958..79794) 0.0075 4_[+1]_10 complement(242189..24482 0.0082 13_[+1]_1 complement(1413068..1413 0.0082 14_[+1] complement(451802..45217 0.0089 13_[+1]_1 complement(1203457..1203 0.0089 13_[+1]_1 complement(1200596..1201 0.0089 11_[+1]_3 complement(1180999..1181 0.0089 13_[+1]_1 complement(632526..63344 0.0089 11_[+1]_3 complement(1358965..1359 0.0097 13_[+1]_1 complement(824994..82579 0.0097 13_[+1]_1 complement(430373..43129 0.011 8_[+1]_6 complement(542844..54314 0.011 11_[+1]_3 complement(1625580..1625 0.011 5_[+1]_9 complement(1550718..1552 0.012 12_[+1]_2 complement(1324433..1325 0.013 12_[+1]_2 complement(1052902..1055 0.016 13_[+1]_1 complement(1013027..1014 0.016 14_[+1] complement(169787..17059 0.018 12_[+1]_2 complement(1206124..1206 0.019 1_[+1]_13 complement(594910..59587 0.019 9_[+1]_5 complement(1357918..1358 0.022 7_[+1]_7 complement(286984..28866 0.024 14_[+1] complement(1905509..1906 0.024 11_[+1]_3 complement(1583576..1584 0.024 11_[+1]_3 complement(1096067..1099 0.024 11_[+1]_3 complement(1390681..1391 0.026 14_[+1] complement(1536529..1537 0.029 1_[+1]_13 complement(1503584..1503 0.029 10_[+1]_4 complement(1828730..1830 0.043 13_[+1]_1 complement(1220533..1221 0.045 14_[+1] complement(1517804..1518 0.048 13_[+1]_1 complement(1664880..1665 0.064 1_[+1]_13 complement(1071545..1072 0.071 2_[+1]_12 complement(14702..15538) 0.075 13_[+1]_1 complement(1195040..1195 0.11 12_[+1]_2 complement(1070462..1071 0.11 13_[+1]_1 complement(1659277..1659 0.12 1_[+1]_13 complement(289325..29041 0.14 13_[+1]_1 complement(1048908..1049 0.15 3_[+1]_11 complement(1705648..1706 0.17 14_[+1] complement(1170689..1171 0.17 7_[+1]_7 complement(217500..21978 0.24 7_[+1]_7 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=21 seqs=254 complement(158087..15840 ( 14) AAATACCTTTTAGGTGGTATT 1 complement(309389..31043 ( 14) ACCTACCTATTAGGTGAAAAT 1 complement(390526..39136 ( 15) ATACACTTATAAGGTGAAAAT 1 complement(1193130..1194 ( 15) AATTAATTTATCGGTGGTTTT 1 complement(1176739..1178 ( 13) ATTTACCTCATAGGTGAAAAT 1 complement(1360769..1361 ( 15) TTTTAATTATTAGGTGATAAT 1 complement(1816848..1818 ( 15) AAAAAATAATGAGGTGATATC 1 complement(1559357..1559 ( 13) TAATAATATATAGGTGGTAAT 1 complement(1047242..1047 ( 15) TATTAATTTTAAGGTGATTTT 1 complement(1211586..1212 ( 15) AACGATTTAATCGGTGATAAC 1 complement(410230..41120 ( 15) ATAAAATTTAACGGTGAAATA 1 complement(1895487..1896 ( 15) AATAACAAAACTGGTGATATT 1 complement(1640126..1640 ( 15) AAACCAGATTATGGTGATATT 1 complement(1699438..1700 ( 15) AATTATCAATAAGGTGAAAAT 1 complement(1298841..1300 ( 15) TAATAATTAATTGGTGAAATT 1 complement(954449..95659 ( 15) AATAATTAATTCGGTGATTTT 1 complement(614717..61538 ( 15) AATTAATCTATTGGTGAAATT 1 complement(418553..41914 ( 15) ATTAACCACAAAGGTGAAAAA 1 complement(1744787..1746 ( 15) AAATACGATAATGGTGATATT 1 complement(1673282..1673 ( 15) TATAATTATTTTGGTGGAATT 1 complement(163200..16395 ( 14) TAAAAATTTAAAGGTGAGATT 1 complement(1608352..1609 ( 15) ATAATATATTTTGGTGATAAT 1 complement(144841..14564 ( 15) TCCGAATACACAGGTGATAAC 1 complement(1246772..1248 ( 15) AAACAACTTATTGGTGTTAAA 1 complement(1178765..1180 ( 14) TTGAACTTTAAAGGTGAAAAC 1 complement(998200..99893 ( 15) ACTAATAATAAAGGTGATAAT 1 complement(1856429..1857 ( 15) ATATCATAAAAAGGTGAATTT 1 complement(1811068..1812 ( 15) TTAAAATAAAATGGTGAAATT 1 complement(1658686..1659 ( 14) TTTAAAGTATGAGGTGATATC 1 complement(1566199..1568 ( 15) TTTTATTTAGTCGGTGATTAT 1 complement(112379..11275 ( 15) AAATAATTATTTGGTGAAAAA 1 complement(48123..48503) ( 15) AAATAATTATTTGGTGAAAAA 1 complement(405002..40545 ( 15) AAAAATATATATGGTGAAATT 1 complement(1815469..1815 ( 15) TATAATAATTGCGGTGATATA 1 complement(1549566..1550 ( 15) ATAAAATTTTAAGGTGGTATG 1 complement(1237650..1238 ( 15) TATTAATTAAAAGGTGATTTA 1 complement(1083764..1084 ( 14) ATTTATAATTTTGGTGGAACC 1 complement(997843..99809 ( 14) ATAATCCATTTTGGTGAAATA 1 complement(1449335..1450 ( 15) TTTATTATTATCGGTGAAATT 1 complement(1005172..1006 ( 15) TATCATAATACTGGTGATAAA 1 complement(802151..80290 ( 15) AATCATAATGCTGGTGATTAT 1 complement(465334..46611 ( 15) ATTAATTTTAAAGGTGTAATT 1 complement(785737..78626 ( 15) TATCAAATCTAAGGTGTAAAT 1 complement(630578..63141 ( 15) ATTATCATATATGGTGATATA 1 complement(1126314..1127 ( 15) ATCAATATATTAGGTGTAATT 1 complement(1045281..1046 ( 11) AACCACTATTTTGGAGGAAAA 1 complement(1037557..1038 ( 15) AATTCATATTGAGGTGTAACC 1 complement(1660129..1660 ( 15) AAATAAAAATATGGTGTTATT 1 complement(1861801..1863 ( 15) TATTTATCAATCGGTGAAACT 1 complement(1841424..1842 ( 15) ATTTTAAATATTGGTGATAAA 1 complement(1665641..1666 ( 15) AGATAACTAATAGGTGTAATT 1 complement(1332908..1333 ( 15) AAATGCTATTTAGGGGATAAT 1 complement(1173860..1176 ( 15) ATTCATATTCTGGGTGAAAAA 1 complement(1167558..1169 ( 15) TATATAAATACAGGTGACAAT 1 complement(174196..17507 ( 15) AAATTAAATATTGGTGGTAAA 1 complement(1883870..1884 ( 15) AAATAATTCTTTGGTGTATTT 1 complement(1858715..1861 ( 15) AGTTCTTTTTTAGGTGTCATT 1 complement(1204223..1204 ( 15) AATACATAAAAAGGTGGTAAG 1 complement(295646..29699 ( 15) AATTTGATTATTGGTGATATT 1 complement(1171284..1171 ( 15) TTCTAAGTCATAGGTGATTAA 1 complement(1819575..1820 ( 15) CGTATACATTTTGGTGAAATT 1 complement(1319680..1320 ( 15) TTAGGATTATTTGGTGAAATT 1 complement(1202153..1202 ( 14) TTCCTTTAAATGGGTGAATAT 1 complement(1062092..1063 ( 15) TACCATTATTGAGGCGGTATT 1 complement(357702..35918 ( 15) ATTGTTAATATTGGTGAAATC 1 complement(1922351..1923 ( 15) TTCTAAATAATTGGTGTAATA 1 complement(1619439..1620 ( 15) TTATTAGATATCGGTGATTAT 1 complement(965100..96629 ( 15) AGTTAATAATAAGGTGAGTTT 1 complement(543168..54415 ( 12) TATCAACAATACGGGGGTGCT 1 complement(1867055..1868 ( 15) AATTTAAAAATAGGTGAACTT 1 complement(1601836..1602 ( 15) TATTATGTATAAGGTGAAAAA 1 complement(1593054..1594 ( 15) AACCTCTGTTGAGGTGTATTT 1 complement(1515298..1517 ( 15) GAAACCTTTAGAGGTGTAATT 1 complement(1198206..1198 ( 15) AATGTAAAGACAGGTGATATT 1 complement(1195519..1195 ( 14) TTTGTAATTTAAGGTGGTCTT 1 complement(313781..31445 ( 15) AAATACTATGATGGTGAGTAA 1 complement(1546236..1546 ( 15) ACACATAAACTTGGTGTAATT 1 complement(1201732..1202 ( 15) AAAAATAAGTAAGGTGGAATA 1 complement(226853..22847 ( 15) TATTTATACTACGGTGAAAGA 1 complement(1813286..1814 ( 15) GATGATTATAAAGGTGATTTT 1 complement(1561189..1562 ( 14) AATTTATTAAGAGGTGTATTT 1 complement(1357187..1357 ( 6) AAATTATTTAATGGTGTATTT 1 complement(1035848..1036 ( 15) AAGTAATTTGACGGTGATTAG 1 complement(631504..63251 ( 15) AAATTTTATTTTGGTGTAAAT 1 complement(1857517..1858 ( 15) TAATATGTATAAGGTGTAATT 1 complement(1351930..1352 ( 15) TCATATATATAAGGTGGTCAA 1 complement(1198619..1199 ( 15) TAAGGTATTATAGGTGGTTTC 1 complement(1196819..1197 ( 15) CTTAGCTTGTAAGGTGATAAA 1 complement(1187886..1188 ( 15) TTGGGCTAATTTGGTGAAATT 1 complement(374033..37443 ( 15) TTTACCGTTTGAGGTGTTTTA 1 complement(1839217..1840 ( 15) ATATTATTGTGAGGAGATATT 1 complement(1509644..1510 ( 15) TAACTTATAAGAGGTGTTTTT 1 complement(1199858..1200 ( 13) CTTGAAGAATAAGGTGATTAT 1 complement(1171869..1172 ( 13) AAGAATAATTCAGGTGATGTT 1 complement(28150..29961) ( 15) TTTTATTTTAGAGGAGATTTA 1 complement(315081..31579 ( 15) TACAGAAATCACGGTGTAATT 1 complement(1848811..1849 ( 15) TAATTCAATTATGGTGATGAT 1 complement(164129..16540 ( 15) AAATAAATTAAAAGTGAAAAT 1 complement(1427328..1428 ( 15) TTTATTTAATTTGGTGAGATA 1 complement(92406..94217) ( 15) TTTTATTTTAGAGGAGATTTA 1 complement(837376..83817 ( 15) ACTACAATAATCGGTGTTCAA 1 complement(1929466..1931 ( 14) ATAAAACAAATATGTGATAAT 1 complement(1697464..1698 ( 8) TGTCAATCAATGGGTGTAAAC 1 complement(1496000..1496 ( 15) AAAAGGATATATGGTGATAAT 1 complement(1452900..1453 ( 13) CTAAAATACCTCGGAGGTATA 1 complement(1202929..1203 ( 12) CACTCTATATCTGGAGGTATA 1 complement(1196144..1196 ( 15) AAAAAGGTCAATGGTGAAAAC 1 complement(1169951..1170 ( 15) CTTATTTGATTCGGTGAAATA 1 complement(623175..62459 ( 15) AAAGCTTTGTAAGGGGAAAAT 1 complement(212655..21348 ( 15) TAGTGATGTTTTGGTGATATA 1 complement(897258..89824 ( 15) CGAACATTAAACGGTGAAGTT 1 complement(308047..30922 ( 12) ACTAATAAAATAGGTGTTTAA 1 complement(1902159..1902 ( 12) TAAAATAAAATAGGGGAATAC 1 complement(1655929..1658 ( 15) ATTCAAAATAAAAGGGATAAT 1 complement(1650808..1651 ( 15) TTTAAGGACTATGGTGGAAAT 1 complement(1137201..1138 ( 14) GATTACCCCGGAGGTGACCAT 1 complement(594626..59488 ( 15) AAAACTTATAAAAGTGATTTT 1 complement(1912354..1913 ( 12) ATGACAATTACAGGAGGCTAC 1 complement(1345376..1347 ( 15) ACTTCCATTGTTTGTGATACT 1 complement(854109..85568 ( 15) TACCGACTAATTCGTGGTAAA 1 complement(293566..29550 ( 15) ATTCTTGCTTATGGTGGTAGA 1 complement(237779..23913 ( 13) TTAATATTTTATGGAGGAAAA 1 complement(1919186..1920 ( 15) GTCTAATTACAAGGTGTTTTA 1 complement(1386628..1387 ( 15) TAAATTCTTAAAAGTGAAATC 1 complement(1355495..1355 ( 15) TAATTGTAATTTGGTGAATAT 1 complement(771128..77196 ( 15) TGCATATTTAATGGTGATTTG 1 complement(1903948..1904 ( 14) ATACGTAATATAGGTGAGAGA 1 complement(1875820..1878 ( 15) AGAATTAAAAAAGGTGATTTA 1 complement(1264728..1266 ( 12) ATAAATTGATTTGGTGACGAT 1 complement(1201342..1201 ( 15) TAATAAATAAGAGGTGTGAGC 1 complement(1121859..1122 ( 14) AAAACTACAATTGGTGAGTTA 1 complement(1849907..1850 ( 14) TAATCTCAGGAAGGAGATAAA 1 complement(1823172..1823 ( 15) TATCAAAAGTTGCGTGAAATT 1 complement(1187140..1187 ( 13) GTAAAATTAAAAGGTGTTTAA 1 complement(1904485..1905 ( 14) ATTAGTATTTGAGGTGTACTT 1 complement(1492959..1494 ( 15) AATATGAATTATGGAGATATT 1 complement(938169..93878 ( 15) GCAAGCAAAAACGGTGAAACA 1 complement(39311..40924) ( 11) ATTTTTTATATTGGAGGATTA 1 complement(15732..16889) ( 15) ACAGAATTAGAGAGTGAAATC 1 complement(1881389..1882 ( 15) GTTATAGAATTTGGTGAATTT 1 complement(103567..10518 ( 11) ATTTTTTATATTGGAGGATTA 1 complement(79988..81145) ( 15) ACAGAATTAGAGAGTGAAATC 1 complement(959095..96006 ( 12) ACATCTCATTGTAGGGATAAT 1 complement(457001..45789 ( 15) ATTAAAAATGAGCGTGATAAA 1 complement(1626220..1627 ( 15) ATGAAACAGCGAGGAGAAACT 1 complement(1613728..1614 ( 15) AAAAATTTTGTGGGCGATACA 1 complement(1203978..1204 ( 15) ATCAAAACGAGAGGTGCATTA 1 complement(1116222..1117 ( 15) AAGTATTAGTATGGTGTCTAT 1 complement(739495..73981 ( 13) AAAGGCTTAGAAGGTGGGGTT 1 complement(1899889..1900 ( 12) AGTAAATGCTTTGGAGGAATA 1 complement(1672641..1673 ( 15) AAATAATTATGCGGGTGAATT 1 complement(1539705..1540 ( 9) TTTAAATATTTTGGTGAGTGG 1 complement(1522841..1523 ( 6) AAATAATAATTTGGAGCATTA 1 complement(1450080..1450 ( 12) TTTTTATATTGAGGTGGATGG 1 complement(613448..61464 ( 12) ATAAAAATTATAAGAGGAATT 1 complement(1673579..1674 ( 15) GATAAATAAAAATGTGATATT 1 complement(1450821..1451 ( 14) AAAAATTTGAGAGGTTATATT 1 complement(1333982..1334 ( 15) AAGGTAAAATTTGGTGTAATA 1 complement(1483215..1484 ( 13) TATTAGTTTGGCGGAGGGAAA 1 complement(1451599..1452 ( 14) AAAAAACCGAGAGGTTATATT 1 complement(1695120..1695 ( 12) GGGCATATATGAGGAGGTAAT 1 complement(1611425..1612 ( 13) AAAAAATTTAAGGGAGTGAAA 1 complement(1545745..1546 ( 15) TACGAATAGGAAGGTGTCAGA 1 complement(1528842..1529 ( 12) ATTCAACATACGAGGGATTGT 1 complement(1434134..1434 ( 15) TTATGGATTGTTGGTGTTTTT 1 complement(1204984..1205 ( 15) TCGTTGAATATTGGTGAAACA 1 complement(1185467..1186 ( 12) TTTTAAACTAAAGGAGGCCAA 1 complement(1172599..1173 ( 13) GAAAACTGAGAAGGAGGTAAA 1 complement(1165492..1165 ( 15) GTACAATTATTGAGGGAAATT 1 complement(901996..90402 ( 15) AATGTAAATGCGAGTGATAAT 1 complement(612544..61335 ( 12) AAATGATTTTAAAGAGGTAAT 1 complement(1920554..1922 ( 15) AATTTAAAATTATGGGATATT 1 complement(1897899..1899 ( 12) AATAACGTTAAAAGAGGTTTT 1 complement(1391922..1392 ( 15) TGACGATTAGAGGGAGTTATT 1 complement(1756649..1757 ( 15) CTAAAATTAAAGAGAGATATT 1 complement(1671177..1672 ( 15) TTAAAAATAATAAGGGATAGT 1 complement(1383519..1384 ( 15) AATAATTTATATGGGTGAATT 1 complement(1241640..1242 ( 12) TTTTTAAAATTCGGAGGGTGC 1 complement(834881..83625 ( 15) TACTATAAAAGAGGCGCAAAT 1 complement(175123..17653 ( 15) TGAATAATATGATGTGATATT 1 complement(1199685..1199 ( 12) TAGAAAGGACAAGGAGGTAAC 1 complement(1903061..1903 ( 15) ATACATAGAGCGTGTGAAATT 1 complement(155337..15613 ( 14) AAAATACAGAAAGGGGTTTGC 1 complement(1594978..1596 ( 6) TAGTAGATTATTAGTGATATA 1 complement(142841..14303 ( 15) AAAGCATAAGGATGTGATTTA 1 complement(1382288..1383 ( 13) ATTGCGTATACAGGAGGAAGA 1 complement(1239037..1239 ( 15) TTAATTTAATTGAGGGATATT 1 complement(1197598..1198 ( 12) CTAAAGTTATAAGGAGGAATG 1 complement(1552231..1553 ( 15) TGTCTTAAAGGATGTGATATT 1 complement(1055927..1057 ( 15) ATTAATATTTTGAGGGCTAAT 1 complement(944817..94579 ( 6) TAACGAATAAAACGGGATAAA 1 complement(939104..93991 ( 15) ATAAAATAACTATGTGCAACT 1 complement(652738..65441 ( 3) TATTACATTTTCAGTTGAATT 1 complement(603659..60441 ( 15) ATAAACTAAAAGAGGGGACTT 1 complement(38103..39035) ( 13) ATGAAACTTATAAGAGGATTA 1 complement(401649..40214 ( 15) TAATTTAAAGATAGTGGTTAT 1 complement(1432118..1432 ( 3) GTTTAAATTACTGGTTATTAT 1 complement(114843..11613 ( 13) ATTTTTAGATAGGGTGTGAAA 1 complement(102359..10329 ( 13) ATGAAACTTATAAGAGGATTA 1 complement(664881..66595 ( 9) ATCAAAAAAGCACGAGGTAGC 1 complement(50587..51882) ( 13) ATTTTTAGATAGGGTGTGAAA 1 complement(1596893..1598 ( 15) AGTAAAATAACAAGTGATTTG 1 complement(1199255..1199 ( 12) ACGATAAGACGAGGAGGTATA 1 complement(1834997..1836 ( 5) AATTTAATTTTACCTGATAAT 1 complement(617463..61855 ( 15) TTTATAAAAATTTGTGAAAAA 1 complement(202482..20427 ( 9) TTGGTAATAAATGGAGATTGT 1 complement(1165895..1167 ( 12) ACATATCATAAATGAGGCAAA 1 complement(1019608..1020 ( 15) AGAATTATATAGAGTGATTAT 1 complement(852252..85380 ( 15) ATTTAGGTATTGCGTGAAAAA 1 complement(848240..84881 ( 15) TAAAAAGGATAAAGGGATAAT 1 complement(141962..14282 ( 5) ATTTATTTTAAATGTGCCTGC 1 complement(1303384..1304 ( 5) AAATTATTTATGCGAGTTAAT 1 complement(78958..79794) ( 5) ATTTATTTTAAATGTGCCTGC 1 complement(242189..24482 ( 14) TAATAAAAATAAGGGTAATAC 1 complement(1413068..1413 ( 15) TTGACTACAGTGAGTGATAAA 1 complement(451802..45217 ( 14) GAAAATAGGAAAGGTGAGTAA 1 complement(1203457..1203 ( 14) CTTTATTTGGGTAGGGACACC 1 complement(1200596..1201 ( 12) CTAAAAAGATTAGGAGGGCAA 1 complement(1180999..1181 ( 14) TAAACAAAAATGAGGGAGATA 1 complement(632526..63344 ( 12) GAACAATTAAAAGAAGGTATT 1 complement(1358965..1359 ( 14) ATAACTTAAGTAGGTTAGTAA 1 complement(824994..82579 ( 14) AGTAGTGTATTGGGAGATTAA 1 complement(430373..43129 ( 9) TACGACTATATTAGGGCTTGT 1 complement(542844..54314 ( 12) AGTAAAAATAACGGATGTAAA 1 complement(1625580..1625 ( 6) AAATAATACTAAGGATAATAA 1 complement(1550718..1552 ( 13) ACTCTTCTTATTAGAGGTGCA 1 complement(1324433..1325 ( 13) CTATAAAAATTAGGTTGATAG 1 complement(1052902..1055 ( 14) ATTTATAAGCGTAGTGATTAG 1 complement(1013027..1014 ( 15) AAGCGACGAAAGAGGGAAAAA 1 complement(169787..17059 ( 13) TAAGAAAGTAATTGAGGTATA 1 complement(1206124..1206 ( 2) ATACAATATGAAGCTTTAACC 1 complement(594910..59587 ( 10) TGGTAATAGGGAGGGTGTAAT 1 complement(1357918..1358 ( 8) AACAGAAATTTAAGAGAGGAT 1 complement(286984..28866 ( 15) TTAGCAATTGGAAATGATAAT 1 complement(1905509..1906 ( 12) TAGAAAAGTAGAGGGGTTGAG 1 complement(1583576..1584 ( 12) ATAAAATTTATTTATGAAATA 1 complement(1096067..1099 ( 12) AAAATAATAAAAAGAGTTGTT 1 complement(1390681..1391 ( 15) AAATTATTCATCTGGTGAATT 1 complement(1536529..1537 ( 2) AATTATTTTTAAAAGGAATTT 1 complement(1503584..1503 ( 11) TATTTTAATAATGGAGTAGAG 1 complement(1828730..1830 ( 14) TAAAAATTCAAAAAGGACAAA 1 complement(1220533..1221 ( 15) TTTATTCAATTATCGGATTTA 1 complement(1517804..1518 ( 14) TTTTAACTTTTTTAAGCTATC 1 complement(1664880..1665 ( 2) AAAATTATTTATTGATATTTT 1 complement(1071545..1072 ( 3) ATTTTGGAAGATACTGAAACA 1 complement(14702..15538) ( 14) TACTAATTTTAATCTTTAAAT 1 complement(1195040..1195 ( 13) ACAAATTTACAATATGTATCA 1 complement(1070462..1071 ( 14) ATCTTAAATAATAATTACAAT 1 complement(1659277..1659 ( 2) TATATATTATTCAATTAATAT 1 complement(289325..29041 ( 14) TAAAATAATATAAATTATTTA 1 complement(1048908..1049 ( 4) TTAACATACTTAACATACTTA 1 complement(1705648..1706 ( 15) AAAAATCCAAAATCTTGGTAA 1 complement(1170689..1171 ( 8) AACAAAATCACAAATCACAAA 1 complement(217500..21978 ( 8) AACTAATACTAAAATAATAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 3810 bayes= 3.80735 E= 1.0e-159 37 -57 -149 0 19 -6 -112 11 1 49 -90 15 -4 80 -77 9 44 43 -97 -48 29 66 -149 -16 -17 66 -105 32 3 -69 -121 38 3 2 -112 28 4 -69 -39 20 -8 -6 -16 17 22 49 -54 -23 -126 -115 219 -202 -317 -134 258 -1463 -114 -257 -44 96 -675 -415 256 -208 43 -98 54 -105 -12 -15 -97 42 58 -98 -183 -29 -5 -24 -121 41 -28 60 -171 50 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 254 E= 1.0e-159 0.547244 0.047244 0.055118 0.350394 0.484252 0.066929 0.070866 0.377953 0.429134 0.098425 0.082677 0.389764 0.413386 0.122047 0.090551 0.374016 0.574803 0.094488 0.078740 0.251969 0.519685 0.110236 0.055118 0.314961 0.377953 0.110236 0.074803 0.437008 0.433071 0.043307 0.066929 0.456693 0.433071 0.070866 0.070866 0.425197 0.437008 0.043307 0.118110 0.401575 0.401575 0.066929 0.137795 0.393701 0.496063 0.098425 0.106299 0.299213 0.177165 0.031496 0.704724 0.086614 0.047244 0.027559 0.925197 0.000000 0.192913 0.011811 0.114173 0.681102 0.003937 0.003937 0.909449 0.082677 0.570866 0.035433 0.224409 0.169291 0.389764 0.062992 0.078740 0.468504 0.633858 0.035433 0.043307 0.287402 0.409449 0.059055 0.066929 0.464567 0.350394 0.106299 0.047244 0.496063 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 regular expression -------------------------------------------------------------------------------- [AT][AT][AT][AT][AT][AT][TA][TA][AT][AT][AT][AT]GGTG[AG][TA][AT][TA][TA] -------------------------------------------------------------------------------- Time 8.08 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- complement(48123..48503) 3.77e-04 14_[+1(2.52e-05)] complement(542844..54314 1.47e-01 35 complement(50587..51882) 7.51e-02 35 complement(543168..54415 2.87e-03 35 complement(594626..59488 1.04e-02 35 complement(594910..59587 2.55e-01 35 complement(603659..60441 6.84e-02 35 complement(612544..61335 4.16e-02 35 complement(613448..61464 2.70e-02 35 complement(614717..61538 1.65e-04 14_[+1(1.10e-05)] complement(617463..61855 9.01e-02 35 complement(623175..62459 8.04e-03 35 complement(630578..63141 7.66e-04 14_[+1(5.11e-05)] complement(631504..63251 4.59e-03 35 complement(632526..63344 1.26e-01 35 complement(652738..65441 6.84e-02 35 complement(664881..66595 7.51e-02 35 complement(739495..73981 2.42e-02 35 complement(771128..77196 1.34e-02 35 complement(785737..78626 7.66e-04 14_[+1(5.11e-05)] complement(802151..80290 6.12e-04 14_[+1(4.08e-05)] complement(824994..82579 1.37e-01 35 complement(834881..83625 5.11e-02 35 complement(837376..83817 7.03e-03 35 complement(848240..84881 9.83e-02 35 complement(852252..85380 9.83e-02 35 complement(854109..85568 1.19e-02 35 complement(897258..89824 9.18e-03 35 complement(901996..90402 4.16e-02 35 complement(938169..93878 1.92e-02 35 complement(939104..93991 6.84e-02 35 complement(944817..94579 6.84e-02 35 complement(954449..95659 1.21e-04 14_[+1(8.08e-06)] complement(959095..96006 2.16e-02 35 complement(965100..96629 2.87e-03 35 complement(78958..79794) 1.07e-01 35 complement(79988..81145) 2.16e-02 35 complement(997843..99809 4.84e-04 13_[+1(3.22e-05)]_1 complement(998200..99893 2.91e-04 14_[+1(1.94e-05)] complement(1005172..1006 6.12e-04 14_[+1(4.08e-05)] complement(1013027..1014 2.11e-01 35 complement(1019608..1020 9.83e-02 35 complement(1035848..1036 4.59e-03 35 complement(1037557..1038 9.49e-04 14_[+1(6.33e-05)] complement(1045281..1046 9.49e-04 10_[+1(6.33e-05)]_4 complement(1047242..1047 4.24e-05 14_[+1(2.83e-06)] complement(1048908..1049 9.06e-01 35 complement(1052902..1055 2.11e-01 35 complement(1055927..1057 6.84e-02 35 complement(1062092..1063 2.43e-03 35 complement(1070462..1071 8.32e-01 35 complement(1071545..1072 6.71e-01 35 complement(1083764..1084 4.84e-04 13_[+1(3.22e-05)]_1 complement(92406..94217) 7.03e-03 35 complement(1096067..1099 3.05e-01 35 complement(1116222..1117 2.42e-02 35 complement(1121859..1122 1.52e-02 35 complement(1126314..1127 9.49e-04 14_[+1(6.33e-05)] complement(1137201..1138 1.04e-02 35 complement(102359..10329 7.51e-02 35 complement(1165492..1165 4.16e-02 35 complement(1165895..1167 9.83e-02 35 complement(1167558..1169 1.42e-03 14_[+1(9.44e-05)] complement(1169951..1170 8.04e-03 35 complement(1170689..1171 9.40e-01 35 complement(1171284..1171 2.04e-03 35 complement(103567..10518 2.16e-02 35 complement(1171869..1172 6.12e-03 35 complement(1172599..1173 4.16e-02 35 complement(1173860..1176 1.42e-03 14_[+1(9.44e-05)] complement(1176739..1178 7.23e-06 12_[+1(4.82e-07)]_2 complement(1178765..1180 2.91e-04 13_[+1(1.94e-05)]_1 complement(1180999..1181 1.26e-01 35 complement(1185467..1186 3.75e-02 35 complement(1187140..1187 1.71e-02 35 complement(1187886..1188 5.31e-03 35 complement(1193130..1194 7.23e-06 14_[+1(4.82e-07)] complement(1195040..1195 8.17e-01 35 complement(1195519..1195 3.38e-03 35 complement(1196144..1196 8.04e-03 35 complement(1196819..1197 5.31e-03 35 complement(1197598..1198 6.22e-02 35 complement(1198206..1198 3.38e-03 35 complement(1198619..1199 5.31e-03 35 complement(1199255..1199 8.23e-02 35 complement(1199685..1199 5.64e-02 35 complement(1199858..1200 6.12e-03 35 complement(1200596..1201 1.26e-01 35 complement(1201342..1201 1.52e-02 35 complement(1201732..1202 3.94e-03 35 complement(1202153..1202 2.43e-03 35 complement(1202929..1203 8.04e-03 35 complement(1203457..1203 1.26e-01 35 complement(1203978..1204 2.42e-02 35 complement(1204223..1204 1.71e-03 35 complement(1204984..1205 3.75e-02 35 complement(1206124..1206 2.55e-01 35 complement(1211586..1212 6.16e-05 14_[+1(4.11e-06)] complement(1220533..1221 5.00e-01 35 complement(1237650..1238 4.84e-04 14_[+1(3.22e-05)] complement(1239037..1239 6.22e-02 35 complement(1241640..1242 5.11e-02 35 complement(1246772..1248 2.91e-04 14_[+1(1.94e-05)] complement(112379..11275 3.77e-04 14_[+1(2.52e-05)] complement(1264728..1266 1.52e-02 35 complement(114843..11613 7.51e-02 35 complement(1298841..1300 1.21e-04 14_[+1(8.08e-06)] complement(1303384..1304 1.07e-01 35 complement(1319680..1320 2.43e-03 35 complement(1324433..1325 1.84e-01 35 complement(1332908..1333 1.42e-03 14_[+1(9.44e-05)] complement(1333982..1334 3.02e-02 35 complement(1345376..1347 1.19e-02 35 complement(1351930..1352 5.31e-03 35 complement(1355495..1355 1.34e-02 35 complement(1357187..1357 4.59e-03 35 complement(1357918..1358 2.88e-01 35 complement(1358965..1359 1.37e-01 35 complement(1360769..1361 1.86e-05 14_[+1(1.24e-06)] complement(1382288..1383 6.22e-02 35 complement(1383519..1384 5.11e-02 35 complement(1386628..1387 1.34e-02 35 complement(1390681..1391 3.22e-01 35 complement(1391922..1392 4.61e-02 35 complement(1413068..1413 1.16e-01 35 complement(1427328..1428 7.03e-03 35 complement(1432118..1432 7.51e-02 35 complement(1434134..1434 3.75e-02 35 complement(1449335..1450 6.12e-04 14_[+1(4.08e-05)] complement(1450080..1450 2.70e-02 35 complement(1450821..1451 3.02e-02 35 complement(1451599..1452 3.37e-02 35 complement(1452900..1453 8.04e-03 35 complement(1483215..1484 3.37e-02 35 complement(1492959..1494 1.92e-02 35 complement(1496000..1496 8.04e-03 35 complement(1503584..1503 3.59e-01 35 complement(1509644..1510 6.12e-03 35 complement(1515298..1517 3.38e-03 35 complement(1517804..1518 5.22e-01 35 complement(1522841..1523 2.70e-02 35 complement(1528842..1529 3.75e-02 35 complement(1536529..1537 3.59e-01 35 complement(141962..14282 1.07e-01 35 complement(1539705..1540 2.70e-02 35 complement(142841..14303 6.22e-02 35 complement(1545745..1546 3.75e-02 35 complement(1546236..1546 3.94e-03 35 complement(1549566..1550 4.84e-04 14_[+1(3.22e-05)] complement(1550718..1552 1.71e-01 35 complement(1552231..1553 6.84e-02 35 complement(1559357..1559 4.24e-05 12_[+1(2.83e-06)]_2 complement(1561189..1562 4.59e-03 35 complement(1566199..1568 3.77e-04 14_[+1(2.52e-05)] complement(144841..14564 2.91e-04 14_[+1(1.94e-05)] complement(1583576..1584 3.05e-01 35 complement(1593054..1594 3.38e-03 35 complement(1594978..1596 6.22e-02 35 complement(1596893..1598 8.23e-02 35 complement(1601836..1602 3.38e-03 35 complement(1608352..1609 2.91e-04 14_[+1(1.94e-05)] complement(1611425..1612 3.75e-02 35 complement(1613728..1614 2.42e-02 35 complement(1619439..1620 2.87e-03 35 complement(1625580..1625 1.59e-01 35 complement(1626220..1627 2.42e-02 35 complement(1640126..1640 8.73e-05 14_[+1(5.82e-06)] complement(1650808..1651 1.04e-02 35 complement(1655929..1658 1.04e-02 35 complement(1658686..1659 3.77e-04 13_[+1(2.52e-05)]_1 complement(1659277..1659 8.46e-01 35 complement(1660129..1660 1.16e-03 14_[+1(7.76e-05)] complement(1664880..1665 6.29e-01 35 complement(1665641..1666 1.42e-03 14_[+1(9.44e-05)] complement(1671177..1672 5.11e-02 35 complement(1672641..1673 2.70e-02 35 complement(1673282..1673 2.21e-04 14_[+1(1.47e-05)] complement(1673579..1674 3.02e-02 35 complement(1695120..1695 3.75e-02 35 complement(1697464..1698 8.04e-03 35 complement(155337..15613 6.22e-02 35 complement(1699438..1700 1.21e-04 14_[+1(8.08e-06)] complement(1705648..1706 9.40e-01 35 complement(158087..15840 7.80e-08 13_[+1(5.20e-09)]_1 complement(1744787..1746 2.21e-04 14_[+1(1.47e-05)] complement(1756649..1757 5.11e-02 35 complement(163200..16395 2.91e-04 13_[+1(1.94e-05)]_1 complement(164129..16540 7.03e-03 35 complement(1811068..1812 3.77e-04 14_[+1(2.52e-05)] complement(1813286..1814 4.59e-03 35 complement(1815469..1815 4.84e-04 14_[+1(3.22e-05)] complement(1816848..1818 4.24e-05 14_[+1(2.83e-06)] complement(1819575..1820 2.43e-03 35 complement(1823172..1823 1.71e-02 35 complement(1828730..1830 4.79e-01 35 complement(1834997..1836 9.01e-02 35 complement(1839217..1840 6.12e-03 35 complement(1841424..1842 1.42e-03 14_[+1(9.44e-05)] complement(1848811..1849 7.03e-03 35 complement(1849907..1850 1.71e-02 35 complement(1856429..1857 3.77e-04 14_[+1(2.52e-05)] complement(1857517..1858 5.31e-03 35 complement(1858715..1861 1.71e-03 35 complement(1861801..1863 1.42e-03 14_[+1(9.44e-05)] complement(1867055..1868 3.38e-03 35 complement(1875820..1878 1.52e-02 35 complement(169787..17059 2.40e-01 35 complement(1881389..1882 2.16e-02 35 complement(1883870..1884 1.71e-03 35 complement(1895487..1896 8.73e-05 14_[+1(5.82e-06)] complement(1897899..1899 4.61e-02 35 complement(1899889..1900 2.70e-02 35 complement(1902159..1902 1.04e-02 35 complement(1903061..1903 6.22e-02 35 complement(1903948..1904 1.52e-02 35 complement(1904485..1905 1.92e-02 35 complement(1905509..1906 3.05e-01 35 complement(1912354..1913 1.19e-02 35 complement(1919186..1920 1.34e-02 35 complement(1920554..1922 4.61e-02 35 complement(1922351..1923 2.87e-03 35 complement(1929466..1931 8.04e-03 35 complement(174196..17507 1.71e-03 35 complement(175123..17653 5.64e-02 35 complement(202482..20427 9.83e-02 35 complement(212655..21348 9.18e-03 35 complement(217500..21978 9.72e-01 35 complement(226853..22847 4.59e-03 35 complement(237779..23913 1.34e-02 35 complement(242189..24482 1.16e-01 35 complement(14702..15538) 6.91e-01 35 complement(15732..16889) 2.16e-02 35 complement(286984..28866 3.05e-01 35 complement(289325..29041 8.95e-01 35 complement(293566..29550 1.34e-02 35 complement(295646..29699 2.04e-03 35 complement(308047..30922 1.04e-02 35 complement(309389..31043 2.44e-06 13_[+1(1.63e-07)]_1 complement(313781..31445 3.94e-03 35 complement(315081..31579 7.03e-03 35 complement(357702..35918 2.87e-03 35 complement(374033..37443 6.12e-03 35 complement(28150..29961) 7.03e-03 35 complement(390526..39136 4.27e-06 14_[+1(2.85e-07)] complement(401649..40214 7.51e-02 35 complement(405002..40545 4.84e-04 14_[+1(3.22e-05)] complement(410230..41120 8.73e-05 14_[+1(5.82e-06)] complement(418553..41914 2.21e-04 14_[+1(1.47e-05)] complement(430373..43129 1.47e-01 35 complement(38103..39035) 7.51e-02 35 complement(39311..40924) 2.16e-02 35 complement(451802..45217 1.26e-01 35 complement(457001..45789 2.42e-02 35 complement(465334..46611 7.66e-04 14_[+1(5.11e-05)] -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because nmotifs = 1 reached. ******************************************************************************** CPU: meme-worker-0 ********************************************************************************