MAST - Motif Alignment and Search Tool
MAST version 4.3.0 (Release date: Sat Sep 26 01:51:56 PDT 2009)
For further information on how to interpret these results or to get
a copy of the MAST software please access http://meme.nbcr.net.
REFERENCE
If you use this program in your research, please cite:
Timothy L. Bailey and Michael Gribskov,
"Combining evidence using p-values: application to sequence homology
searches", Bioinformatics, 14(48-54), 1998.
DATABASE AND MOTIFS
DATABASE ./find2.fasta (nucleotide)
Last updated on Fri May 29 11:04:37 2015
Database contains 3944 sequences, 141984 residues
Scores for positive and reverse complement strands are combined.
MOTIFS ./meme.txt (nucleotide)
MOTIF WIDTH BEST POSSIBLE MATCH
----- ----- -------------------
1 7 AAAGGAG
Random model letter frequencies (from non-redundant database):
A 0.274 C 0.225 G 0.225 T 0.274
SECTION I: HIGH-SCORING SEQUENCES
- Each of the following 85 sequences has E-value less than 30.
- The E-value of a sequence is the expected number of sequences
in a random database of the same size that would match the motifs as
well as the sequence does and is equal to the combined p-value of the
sequence times the number of sequences in the database.
- The combined p-value of a sequence measures the strength of the
match of the sequence to all the motifs and is calculated by
- finding the score of the single best match of each motif
to the sequence (best matches may overlap),
- calculating the sequence p-value of each score,
- forming the product of the p-values,
- taking the p-value of the product.
- The sequence p-value of a score is defined as the
probability of a random sequence of the same length containing
some match with as good or better a score.
- The score for the match of a position in a sequence to a motif
is computed by by summing the appropriate entry from each column of
the position-dependent scoring matrix that represents the motif.
- Sequences shorter than one or more of the motifs are skipped.
- The table is sorted by increasing E-value.
| Links | Sequence Name | Description | E-value | Length
|
|---|
|
| 3915
|
| 15
| 36
|
|
| 3910
|
| 15
| 36
|
|
| 3784
|
| 15
| 36
|
|
| 3687
|
| 15
| 36
|
|
| 3617
|
| 15
| 36
|
|
| 3599
|
| 15
| 36
|
|
| 3544
|
| 15
| 36
|
|
| 3541
|
| 15
| 36
|
|
| 3535
|
| 15
| 36
|
|
| 3497
|
| 15
| 36
|
|
| 3478
|
| 15
| 36
|
|
| 3436
|
| 15
| 36
|
|
| 3411
|
| 15
| 36
|
|
| 3410
|
| 15
| 36
|
|
| 3391
|
| 15
| 36
|
|
| 3267
|
| 15
| 36
|
|
| 3188
|
| 15
| 36
|
|
| 3115
|
| 15
| 36
|
|
| 3104
|
| 15
| 36
|
|
| 3071
|
| 15
| 36
|
|
| 3055
|
| 15
| 36
|
|
| 3004
|
| 15
| 36
|
|
| 2994
|
| 15
| 36
|
|
| 2992
|
| 15
| 36
|
|
| 2972
|
| 15
| 36
|
|
| 2848
|
| 15
| 36
|
|
| 2806
|
| 15
| 36
|
|
| 2787
|
| 15
| 36
|
|
| 2777
|
| 15
| 36
|
|
| 2727
|
| 15
| 36
|
|
| 2710
|
| 15
| 36
|
|
| 2634
|
| 15
| 36
|
|
| 2526
|
| 15
| 36
|
|
| 2509
|
| 15
| 36
|
|
| 2498
|
| 15
| 36
|
|
| 2493
|
| 15
| 36
|
|
| 2484
|
| 15
| 36
|
|
| 2431
|
| 15
| 36
|
|
| 2347
|
| 15
| 36
|
|
| 2246
|
| 15
| 36
|
|
| 2097
|
| 15
| 36
|
|
| 1937
|
| 15
| 36
|
|
| 1888
|
| 15
| 36
|
|
| 1821
|
| 15
| 36
|
|
| 1775
|
| 15
| 36
|
|
| 1710
|
| 15
| 36
|
|
| 1581
|
| 15
| 36
|
|
| 1559
|
| 15
| 36
|
|
| 1419
|
| 15
| 36
|
|
| 1397
|
| 15
| 36
|
|
| 1395
|
| 15
| 36
|
|
| 1372
|
| 15
| 36
|
|
| 1368
|
| 15
| 36
|
|
| 1351
|
| 15
| 36
|
|
| 1300
|
| 15
| 36
|
|
| 1297
|
| 15
| 36
|
|
| 1245
|
| 15
| 36
|
|
| 1179
|
| 15
| 36
|
|
| 1123
|
| 15
| 36
|
|
| 1111
|
| 15
| 36
|
|
| 1059
|
| 15
| 36
|
|
| 1046
|
| 15
| 36
|
|
| 1016
|
| 15
| 36
|
|
| 976
|
| 15
| 36
|
|
| 961
|
| 15
| 36
|
|
| 920
|
| 15
| 36
|
|
| 826
|
| 15
| 36
|
|
| 805
|
| 15
| 36
|
|
| 746
|
| 15
| 36
|
|
| 714
|
| 15
| 36
|
|
| 683
|
| 15
| 36
|
|
| 643
|
| 15
| 36
|
|
| 632
|
| 15
| 36
|
|
| 460
|
| 15
| 36
|
|
| 445
|
| 15
| 36
|
|
| 362
|
| 15
| 36
|
|
| 347
|
| 15
| 36
|
|
| 335
|
| 15
| 36
|
|
| 325
|
| 15
| 36
|
|
| 220
|
| 15
| 36
|
|
| 160
|
| 15
| 36
|
|
| 148
|
| 15
| 36
|
|
| 105
|
| 15
| 36
|
|
| 103
|
| 15
| 36
|
|
| 8
|
| 15
| 36
|
SECTION II: MOTIF DIAGRAMS
- The ordering and spacing of all non-overlapping motif occurrences
are shown for each high-scoring sequence listed in Section I.
- A motif occurrence is defined as a position in the sequence whose
match to the motif has POSITION p-value less than 0.0001.
- The POSITION p-value of a match is the probability of
a single random subsequence of the length of the motif
scoring at least as well as the observed match.
- For each sequence, all motif occurrences are shown unless there
are overlaps. In that case, a motif occurrence is shown only if its
p-value is less than the product of the p-values of the other
(lower-numbered) motif occurrences that it overlaps.
- The table also shows the E-value of each sequence.
- Spacers and motif occurences are indicated by
- Spacers and motif occurences are indicated by
- Spacers and motif occurences are indicated by
- occurrence of motif `n' with p-value less than 0.0001.
A minus sign indicates that the occurrence is on the
reverse complement strand.
- Sequences longer than 1000 are not shown to scale and are indicated by thicker lines.
| Links | Name | Expect | Motifs
|
|---|
|
| 3915
| 15
|
|
|
| 3910
| 15
|
|
|
| 3784
| 15
|
|
|
| 3687
| 15
|
|
|
| 3617
| 15
|
|
|
| 3599
| 15
|
|
|
| 3544
| 15
|
|
|
| 3541
| 15
|
|
|
| 3535
| 15
|
|
|
| 3497
| 15
|
|
|
| 3478
| 15
|
|
|
| 3436
| 15
|
|
|
| 3411
| 15
|
|
|
| 3410
| 15
|
|
|
| 3391
| 15
|
|
|
| 3267
| 15
|
|
|
| 3188
| 15
|
|
|
| 3115
| 15
|
|
|
| 3104
| 15
|
|
|
| 3071
| 15
|
|
|
| 3055
| 15
|
|
|
| 3004
| 15
|
|
|
| 2994
| 15
|
|
|
| 2992
| 15
|
|
|
| 2972
| 15
|
|
|
| 2848
| 15
|
|
|
| 2806
| 15
|
|
|
| 2787
| 15
|
|
|
| 2777
| 15
|
|
|
| 2727
| 15
|
|
|
| 2710
| 15
|
|
|
| 2634
| 15
|
|
|
| 2526
| 15
|
|
|
| 2509
| 15
|
|
|
| 2498
| 15
|
|
|
| 2493
| 15
|
|
|
| 2484
| 15
|
|
|
| 2431
| 15
|
|
|
| 2347
| 15
|
|
|
| 2246
| 15
|
|
|
| 2097
| 15
|
|
|
| 1937
| 15
|
|
|
| 1888
| 15
|
|
|
| 1821
| 15
|
|
|
| 1775
| 15
|
|
|
| 1710
| 15
|
|
|
| 1581
| 15
|
|
|
| 1559
| 15
|
|
|
| 1419
| 15
|
|
|
| 1397
| 15
|
|
|
| 1395
| 15
|
|
|
| 1372
| 15
|
|
|
| 1368
| 15
|
|
|
| 1351
| 15
|
|
|
| 1300
| 15
|
|
|
| 1297
| 15
|
|
|
| 1245
| 15
|
|
|
| 1179
| 15
|
|
|
| 1123
| 15
|
|
|
| 1111
| 15
|
|
|
| 1059
| 15
|
|
|
| 1046
| 15
|
|
|
| 1016
| 15
|
|
|
| 976
| 15
|
|
|
| 961
| 15
|
|
|
| 920
| 15
|
|
|
| 826
| 15
|
|
|
| 805
| 15
|
|
|
| 746
| 15
|
|
|
| 714
| 15
|
|
|
| 683
| 15
|
|
|
| 643
| 15
|
|
|
| 632
| 15
|
|
|
| 460
| 15
|
|
|
| 445
| 15
|
|
|
| 362
| 15
|
|
|
| 347
| 15
|
|
|
| 335
| 15
|
|
|
| 325
| 15
|
|
|
| 220
| 15
|
|
|
| 160
| 15
|
|
|
| 148
| 15
|
|
|
| 105
| 15
|
|
|
| 103
| 15
|
|
|
| 8
| 15
|
|
| SCALE
|
|
|---|
SECTION III: ANNOTATED SEQUENCES
- The positions and p-values of the non-overlapping motif occurrences
are shown above the actual sequence for each of the high-scoring
sequences from Section I.
- A motif occurrence is defined as a position in the sequence whose
match to the motif has POSITION p-value less than 0.0001 as
defined in Section II.
- For each sequence, the first line specifies the name of the sequence.
- The second (and possibly more) lines give a description of the
sequence.
- Following the description line(s) is a line giving the length,
combined p-value, and E-value of the sequence as defined in Section I.
- The next line reproduces the motif diagram from Section II.
- The entire sequence is printed on the following lines.
- Motif occurrences are indicated directly above their positions in the
sequence on lines showing
- the motif number of the occurrence (a minus sign indicates that
the occurrence is on the reverse complement strand),
- the position p-value of the occurrence,
- the best possible match to the motif (or its reverse complement), and
- columns whose match to the motif has a positive score (indicated
by a plus sign).
3915
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 18-[+1]-11
[+1]
6.5e-05
AAAGGAG
+++++++
1 TCCAACCATCGATCTGGTAAAGGAGTGGATGGACAA
3910
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 22_[+1]_7
[+1]
6.5e-05
AAAGGAG
+++++++
1 GATCAAACGCCACGAATGAGCGAAAGGAGTCAGTGA
3784
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 21_[+1]_8
[+1]
6.5e-05
AAAGGAG
+++++++
1 TAGTATACACATGACGTTAGCAAAGGAGTGACGGTA
3687
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 20_[+1]_9
[+1]
6.5e-05
AAAGGAG
+++++++
1 ATAATGCAGATGTCTGTGACAAAGGAGAGCGACCGA
3617
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 18_[+1]_11
[+1]
6.5e-05
AAAGGAG
+++++++
1 GAGGTGGTTTTAGCCAGAAAAGGAGCAAAACAGGTA
3599
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 22_[+1]_7
[+1]
6.5e-05
AAAGGAG
+++++++
1 GTATCAGGTGATTTAAGCGCGGAAAGGAGCAGATCA
3544
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 21_[+1]_8
[+1]
6.5e-05
AAAGGAG
+++++++
1 CGTACAGTAGAGCACACGCGGAAAGGAGGCCAACGA
3541
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 21_[+1]_8
[+1]
6.5e-05
AAAGGAG
+++++++
1 TGCGTCTCTTTATCTATGTGCAAAGGAGTCTTGCAA
3535
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 21_[+1]_8
[+1]
6.5e-05
AAAGGAG
+++++++
1 ATATGTAGTCAGATACCTGGAAAAGGAGTAGCACCG
3497
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 21_[+1]_8
[+1]
6.5e-05
AAAGGAG
+++++++
1 GGCGAGGCGTCTCGCCTCACAAAAGGAGTCAGGAAA
3478
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 21_[+1]_8
[+1]
6.5e-05
AAAGGAG
+++++++
1 TCTGGCAAGCAGATCACAGGCAAAGGAGTAGTACGG
3436
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 22_[+1]_7
[+1]
6.5e-05
AAAGGAG
+++++++
1 CATAACACATAGATCGCGTTGGAAAGGAGCCGGGCA
3411
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 20_[+1]_9
[+1]
6.5e-05
AAAGGAG
+++++++
1 ATCACGTGCTGCCTTATTCCAAAGGAGAATATCTCA
3410
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 20_[+1]_9
[+1]
6.5e-05
AAAGGAG
+++++++
1 AGTTGTGGCAGCAAATACACAAAGGAGTGACCATCA
3391
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 21_[+1]_8
[+1]
6.5e-05
AAAGGAG
+++++++
1 AGTTGGTTCGTCTGGTGAGCAAAAGGAGAGGTTGTA
3267
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 2_[-1]_27
[-1]
6.5e-05
CTCCTTT
+++++++
1 CGCTCCTTTCGCCGCTATAACAGCCACTCCAGTACT
3188
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 17_[-1]_12
[-1]
6.5e-05
CTCCTTT
+++++++
1 ATGCTTTTCACGCGAAACTCCTTTGCTGCAAGCAAT
3115
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 21_[+1]_8
[+1]
6.5e-05
AAAGGAG
+++++++
1 CTTATCACAAGCTTGGGATAGAAAGGAGCAGGACTA
3104
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 23_[-1]_6
[-1]
6.5e-05
CTCCTTT
+++++++
1 AGCGCCAGGATCGACCATAGACTCTCCTTTGAGATT
3071
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 27_[-1]_2
[-1]
6.5e-05
CTCCTTT
+++++++
1 GTAGCTTACGGTCATAGCTGGTAGACTCTCCTTTAC
3055
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 21_[+1]_8
[+1]
6.5e-05
AAAGGAG
+++++++
1 GGTAACCCGACGTGAGCCTGCAAAGGAGAGAGTATA
3004
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 6_[-1]_23
[-1]
6.5e-05
CTCCTTT
+++++++
1 TGTAACCTCCTTTGGTTATGACATAGCGAATATAGC
2994
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 18_[+1]_11
[+1]
6.5e-05
AAAGGAG
+++++++
1 AGCGAATAATTAATGGAGAAAGGAGAGGAACAACCA
2992
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 21_[+1]_8
[+1]
6.5e-05
AAAGGAG
+++++++
1 GCATCCACCCTCTTCACCTGCAAAGGAGCGTGTGTA
2972
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 20_[+1]_9
[+1]
6.5e-05
AAAGGAG
+++++++
1 GTTACGACACTGCCGACATCAAAGGAGGGCGGGCCA
2848
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 22_[+1]_7
[+1]
6.5e-05
AAAGGAG
+++++++
1 AGTGGGCAGTTGCCCGTTGAGCAAAGGAGCGCATCA
2806
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 20_[+1]_9
[+1]
6.5e-05
AAAGGAG
+++++++
1 ACGTGTCCACCAAACGGCTCAAAGGAGAAAGGTGCA
2787
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 17_[+1]_12
[+1]
6.5e-05
AAAGGAG
+++++++
1 TGGTGTTCGGTCAATGAAAAGGAGGCCACGTTCGCA
2777
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: [-1]_29
[-1]
6.5e-05
CTCCTTT
+++++++
1 CTCCTTTCCGCGAAGAGTAACGTTACGAACAACAAC
2727
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 24_[+1]_5
[+1]
6.5e-05
AAAGGAG
+++++++
1 TAGGCTAACCGATATTGAATTACCAAAGGAGTAGTA
2710
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 20_[+1]_9
[+1]
6.5e-05
AAAGGAG
+++++++
1 GGCTGTCGTTCACCTGTTGGAAAGGAGGGGCGTGTA
2634
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 21_[+1]_8
[+1]
6.5e-05
AAAGGAG
+++++++
1 CGTCAGGAATTGCCAGATCGCAAAGGAGCGCTGAAA
2526
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 21_[+1]_8
[+1]
6.5e-05
AAAGGAG
+++++++
1 TTTTGTTGTCAGACGTTGCGCAAAGGAGGAATATCG
2509
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 22_[+1]_7
[+1]
6.5e-05
AAAGGAG
+++++++
1 GGTCTATGCCCGCTACTTCCAGAAAGGAGCAGCCTA
2498
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 19_[+1]_10
[+1]
6.5e-05
AAAGGAG
+++++++
1 GAGGAAAGCTGAGGGTATGAAAGGAGTGCGCGGGTA
2493
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 21_[+1]_8
[+1]
6.5e-05
AAAGGAG
+++++++
1 ACACATCTTTTAACAAGTAGAAAAGGAGAATTCACA
2484
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 21_[+1]_8
[+1]
6.5e-05
AAAGGAG
+++++++
1 ACACATCTTTTAACAAGTAGAAAAGGAGAATTCACA
2431
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 22_[+1]_7
[+1]
6.5e-05
AAAGGAG
+++++++
1 GCACGGCGGCGTCCGCCGCCGCAAAGGAGGCAACAA
2347
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 20_[+1]_9
[+1]
6.5e-05
AAAGGAG
+++++++
1 GTCTGTTTCATGTCGCAACCAAAGGAGGAGCGTCCA
2246
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 13_[+1]_16
[+1]
6.5e-05
AAAGGAG
+++++++
1 CAAATCCTGTGCAAAAGGAGAACATCAATAATCTTA
2097
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 22_[+1]_7
[+1]
6.5e-05
AAAGGAG
+++++++
1 ATAATAAGGCTACGACAACACCAAAGGAGGTGCCTA
1937
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 21_[+1]_8
[+1]
6.5e-05
AAAGGAG
+++++++
1 ATGGCGCTCAGATATGTCACAAAAGGAGAACTGTTA
1888
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 18_[+1]_11
[+1]
6.5e-05
AAAGGAG
+++++++
1 GCACGTTTCATTCCAACTAAAGGAGTCTGCCAACCA
1821
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 2_[-1]_27
[-1]
6.5e-05
CTCCTTT
+++++++
1 TTCTCCTTTCTATTGACAAGTCAATCTTTGCTATAA
1775
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 22_[+1]_7
[+1]
6.5e-05
AAAGGAG
+++++++
1 AACGCAGTGCGCATGACGAGCCAAAGGAGCTGATGA
1710
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 22_[+1]_7
[+1]
6.5e-05
AAAGGAG
+++++++
1 CGCTGCCGTACAACTGATGTGTAAAGGAGGGCCGTA
1581
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 22_[+1]_7
[+1]
6.5e-05
AAAGGAG
+++++++
1 ACCATAGTCCACCGCATAAGATAAAGGAGTCGATGA
1559
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 22_[+1]_7
[+1]
6.5e-05
AAAGGAG
+++++++
1 TCAGGCAAACCAAAACGACAGCAAAGGAGTGCACCG
1419
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 9_[-1]_20
[-1]
6.5e-05
CTCCTTT
+++++++
1 CATAGGATTCTCCTTTACCCAGGGGAGGGTTGCTCT
1397
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 23_[+1]_6
[+1]
6.5e-05
AAAGGAG
+++++++
1 CACGCAAACCTTGCCTCTGTTGAAAAGGAGCATCTA
1395
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 22_[+1]_7
[+1]
6.5e-05
AAAGGAG
+++++++
1 GTTCGCCGAAGGTGCCGTTGAGAAAGGAGTGAGCGA
1372
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 20_[+1]_9
[+1]
6.5e-05
AAAGGAG
+++++++
1 CGGCATCAATCAAGTGCGCGAAAGGAGTCTCGCCCG
1368
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 22_[+1]_7
[+1]
6.5e-05
AAAGGAG
+++++++
1 TGGGTCAGCATTAGTTAAGCACAAAGGAGGGATGTA
1351
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 24_[-1]_5
[-1]
6.5e-05
CTCCTTT
+++++++
1 GCGCACACTTTCGACTTGTATGACCTCCTTTCAGCT
1300
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 1_[-1]_28
[-1]
6.5e-05
CTCCTTT
+++++++
1 GCTCCTTTAGCGTCGTCTGCTGTTTAACAACAACAT
1297
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 18_[-1]_11
[-1]
6.5e-05
CTCCTTT
+++++++
1 CGACACATCCACCGCAGTCTCCTTTCCGGTCGGCTT
1245
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 1_[-1]_28
[-1]
6.5e-05
CTCCTTT
+++++++
1 CCTCCTTTCCGGCGATAGATTGCCTGCACCGCTCGC
1179
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 22_[+1]_7
[+1]
6.5e-05
AAAGGAG
+++++++
1 TACCATCGGCTTGAAGCACCATAAAGGAGGCTGCAA
1123
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 21_[+1]_8
[+1]
6.5e-05
AAAGGAG
+++++++
1 GCAACATTTAGTCTTCAGTGCAAAGGAGAAGTCTTA
1111
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 23_[+1]_6
[+1]
6.5e-05
AAAGGAG
+++++++
1 TGGTATAATGCGCCGCGACAGAAAAAGGAGGTTGCT
1059
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 18_[+1]_11
[+1]
6.5e-05
AAAGGAG
+++++++
1 AGTATAACCTTCTACATCAAAGGAGGCTGGATCGTA
1046
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 21_[+1]_8
[+1]
6.5e-05
AAAGGAG
+++++++
1 TAGTCACAACGACGGCCTGACAAAGGAGTTTGGCCA
1016
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 20_[+1]_9
[+1]
6.5e-05
AAAGGAG
+++++++
1 CAATCGCTTAGGTATAGGTTAAAGGAGCAGTTCTCA
976
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 22_[+1]_7
[+1]
6.5e-05
AAAGGAG
+++++++
1 TGCTATCATACCCTATATCGCGAAAGGAGATGCTCA
961
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 7_[+1]_22
[+1]
6.5e-05
AAAGGAG
+++++++
1 TACAGGTAAAGGAGAGCGCCGTGAGCGCAAAGAAAA
920
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 18_[-1]_11
[-1]
6.5e-05
CTCCTTT
+++++++
1 ATTGCAGACATGCGAGTGCTCCTTTCATTGCAAGGT
826
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 20_[+1]_9
[+1]
6.5e-05
AAAGGAG
+++++++
1 GTTTTTCTATGCCCGCCGCGAAAGGAGTTGGAACGA
805
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 14_[-1]_15
[-1]
6.5e-05
CTCCTTT
+++++++
1 GTCTTCACCGGTCACTCCTTTCTCGTGATTCATCAT
746
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 22_[+1]_7
[+1]
6.5e-05
AAAGGAG
+++++++
1 GTATCAAGACAGCGTAGTCTGCAAAGGAGGTTCGCA
714
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 10_[+1]_19
[+1]
6.5e-05
AAAGGAG
+++++++
1 CTATTCGTGCAAAGGAGCTTTGTGTAAGACCGCGCA
683
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 21_[+1]_8
[+1]
6.5e-05
AAAGGAG
+++++++
1 GAGACCGAACAGCGCAGCGAGAAAGGAGAACCGCGG
643
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 23_[+1]_6
[+1]
6.5e-05
AAAGGAG
+++++++
1 GATGCCTGTGTCCTGTCGAATACAAAGGAGGAACTA
632
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 21_[+1]_8
[+1]
6.5e-05
AAAGGAG
+++++++
1 TGGTGCAGCGACAGCAGACTAAAAGGAGTGAGGCGA
460
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 13_[-1]_16
[-1]
6.5e-05
CTCCTTT
+++++++
1 TGCACCGTTGGACCTCCTTTCATTCATGTATAGGGT
445
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 10_[-1]_19
[-1]
6.5e-05
CTCCTTT
+++++++
1 CAACAGGTATCTCCTTTAAGCTGATGCCAGCCCCCT
362
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 22_[+1]_7
[+1]
6.5e-05
AAAGGAG
+++++++
1 ATCTACCAGGCTCGCGCCGCGCAAAGGAGAACACCG
347
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 21_[+1]_8
[+1]
6.5e-05
AAAGGAG
+++++++
1 TGGAGCGAGGCCGTCCAGCCAAAAGGAGTGTGACAA
335
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 20_[+1]_9
[+1]
6.5e-05
AAAGGAG
+++++++
1 CAGTTATCTGCTCAGATGTGAAAGGAGAATCAGCCA
325
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 23_[+1]_6
[+1]
6.5e-05
AAAGGAG
+++++++
1 AATATTGCAAAAGATTTGCAATGAAAGGAGTGGATA
220
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 17_[+1]_12
[+1]
6.5e-05
AAAGGAG
+++++++
1 TGATCATTGTCGATCACAAAGGAGGGAGCAGCACTA
160
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 22_[+1]_7
[+1]
6.5e-05
AAAGGAG
+++++++
1 GCGAAGACCTCGCGCTCTGTGCAAAGGAGACACGTA
148
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 21_[+1]_8
[+1]
6.5e-05
AAAGGAG
+++++++
1 TAGTAAGTGTACAGGTACTGGAAAGGAGGCAAACTG
105
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 14_[+1]_15
[+1]
6.5e-05
AAAGGAG
+++++++
1 CATTGACCAGCACAAAAGGAGGTCTCATGGCTTCAG
103
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 22_[+1]_7
[+1]
6.5e-05
AAAGGAG
+++++++
1 TTGGGTAACAACGCAATGCTCCAAAGGAGACGATCA
8
LENGTH = 36 COMBINED P-VALUE = 3.87e-03 E-VALUE = 15
DIAGRAM: 25_[-1]_4
[-1]
6.5e-05
CTCCTTT
+++++++
1 AGGCCGTTGAGAAACGACACAGGCACTCCTTTCGTC
Debugging Information
CPU: kodomo.fbb.msu.ru
Time 0.008000 secs.
mast ./meme.txt -d ./find2.fasta -ev 30.000000 -mt 0.000100
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Links to Entrez database at NCBI
Links to sequence scores (section I)
Links to motif diagrams (section II)
Links to sequence/motif annotated alignments (section III)
This information