MAST - Motif Alignment and Search Tool
MAST version 4.3.0 (Release date: Sat Sep 26 01:51:56 PDT 2009)
For further information on how to interpret these results or to get
a copy of the MAST software please access http://meme.nbcr.net.
REFERENCE
If you use this program in your research, please cite:
Timothy L. Bailey and Michael Gribskov,
"Combining evidence using p-values: application to sequence homology
searches", Bioinformatics, 14(48-54), 1998.
DATABASE AND MOTIFS
DATABASE ./seed.fasta (peptide)
Last updated on Sun Apr 29 19:58:54 2012
Database contains 32 sequences, 4297 residues
MOTIFS ./log_meme.txt (peptide)
MOTIF WIDTH BEST POSSIBLE MATCH
----- ----- -------------------
1 50 MHQRKAMMANLSDAFIAMPGGYGTLEELFECWTWSQLGIHNKPCGLLNVN
2 50 KSICVFCGSSPGRKTSYQDAAVELGRYLHERNWDLVYGGGRVGLMGTIAD
3 45 GFYDPLLSFIDHSVQERFINEDHRHIIQSAPTPQELVDKLQNYVP
PAIRWISE MOTIF CORRELATIONS:
MOTIF 1 2
----- ----- -----
2 0.10
3 0.09 0.11
No overly similar pairs (correlation > 0.60) found.
Random model letter frequencies (from non-redundant database):
A 0.073 C 0.018 D 0.052 E 0.062 F 0.040 G 0.069 H 0.022 I 0.056 K 0.058
L 0.092 M 0.023 N 0.046 P 0.051 Q 0.041 R 0.052 S 0.074 T 0.059 V 0.064
W 0.013 Y 0.033
SECTION I: HIGH-SCORING SEQUENCES
- Each of the following 32 sequences has E-value less than 10.
- The E-value of a sequence is the expected number of sequences
in a random database of the same size that would match the motifs as
well as the sequence does and is equal to the combined p-value of the
sequence times the number of sequences in the database.
- The combined p-value of a sequence measures the strength of the
match of the sequence to all the motifs and is calculated by
- finding the score of the single best match of each motif
to the sequence (best matches may overlap),
- calculating the sequence p-value of each score,
- forming the product of the p-values,
- taking the p-value of the product.
- The sequence p-value of a score is defined as the
probability of a random sequence of the same length containing
some match with as good or better a score.
- The score for the match of a position in a sequence to a motif
is computed by by summing the appropriate entry from each column of
the position-dependent scoring matrix that represents the motif.
- Sequences shorter than one or more of the motifs are skipped.
- The table is sorted by increasing E-value.
| Links | Sequence Name | Description | E-value | Length
|
|---|
|
| YJF5_YEAST/63-219
|
| 1.4e-47
| 157
|
|
| YVDD_BACSU/46-176
|
| 5.2e-47
| 131
|
|
| Y4923_PSEAE/48-178
|
| 8.1e-47
| 131
|
|
| FAS6_RHOFA/64-195
|
| 1.4e-46
| 132
|
|
| LOG6_ARATH/63-193
|
| 4.1e-44
| 131
|
|
| LOGLA_ORYSJ/51-181
|
| 2e-43
| 131
|
|
| LOG5_ARATH/53-183
|
| 2.1e-43
| 131
|
|
| LOG2_ARATH/53-183
|
| 1e-41
| 131
|
|
| Q9K8C2_BACHD/45-175
|
| 1.4e-38
| 131
|
|
| Q9KWD2_AGRRH/18-148
|
| 2.6e-38
| 131
|
|
| LOG8_ARATH/54-184
|
| 9.4e-33
| 131
|
|
| Q9K9A3_BACHD/45-174
|
| 5.1e-26
| 130
|
|
| Q99VU1_STAAM/46-176
|
| 1.6e-25
| 131
|
|
| Q984W8_RHILO/49-182
|
| 8e-24
| 134
|
|
| Q9A8P0_CAUCR/286-415
|
| 1.8e-19
| 130
|
|
| Q49952_MYCLE/54-184
|
| 1.3e-16
| 131
|
|
| O05306_MYCTU/54-184
|
| 2.9e-15
| 131
|
|
| Q9Z588_STRCO/47-175
|
| 1.3e-10
| 129
|
|
| Q9RX44_DEIRA/97-227
|
| 7.8e-10
| 131
|
|
| Q9CI72_LACLA/1-131
|
| 7.6e-08
| 131
|
|
| Q9HY11_PSEAE/129-263
|
| 3.5e-07
| 135
|
|
| Q9FBL8_STRCO/116-246
|
| 6.6e-07
| 131
|
|
| O67726_AQUAE/84-214
|
| 8.4e-07
| 131
|
|
| Q9AA01_CAUCR/119-249
|
| 5.7e-06
| 131
|
|
| Q98D62_RHILO/98-228
|
| 0.002
| 131
|
|
| YGDH_SHIFL/190-329
|
| 0.0036
| 140
|
|
| Q9C6Q0_ARATH/133-276
|
| 0.0036
| 144
|
|
| Q9HWR5_PSEAE/192-331
|
| 0.0073
| 140
|
|
| Q9CNF7_PASMU/190-329
|
| 0.052
| 140
|
|
| Q9X0E5_THEMA/48-167
|
| 0.067
| 120
|
|
| Q9PG30_XYLFA/186-325
|
| 0.093
| 140
|
|
| Q9KTK3_VIBCH/164-331
|
| 0.66
| 168
|
SECTION II: MOTIF DIAGRAMS
- The ordering and spacing of all non-overlapping motif occurrences
are shown for each high-scoring sequence listed in Section I.
- A motif occurrence is defined as a position in the sequence whose
match to the motif has POSITION p-value less than 0.0001.
- The POSITION p-value of a match is the probability of
a single random subsequence of the length of the motif
scoring at least as well as the observed match.
- For each sequence, all motif occurrences are shown unless there
are overlaps. In that case, a motif occurrence is shown only if its
p-value is less than the product of the p-values of the other
(lower-numbered) motif occurrences that it overlaps.
- The table also shows the E-value of each sequence.
- Spacers and motif occurences are indicated by
- Spacers and motif occurences are indicated by
- Spacers and motif occurences are indicated by
- occurrence of motif `n' with p-value less than 0.0001.
- Sequences longer than 1000 are not shown to scale and are indicated by thicker lines.
| Links | Name | Expect | Motifs
|
|---|
|
| YJF5_YEAST/63-219
| 1.4e-47
|
|
|
| YVDD_BACSU/46-176
| 5.2e-47
|
|
|
| Y4923_PSEAE/48-178
| 8.1e-47
|
|
|
| FAS6_RHOFA/64-195
| 1.4e-46
|
|
|
| LOG6_ARATH/63-193
| 4.1e-44
|
|
|
| LOGLA_ORYSJ/51-181
| 2e-43
|
|
|
| LOG5_ARATH/53-183
| 2.1e-43
|
|
|
| LOG2_ARATH/53-183
| 1e-41
|
|
|
| Q9K8C2_BACHD/45-175
| 1.4e-38
|
|
|
| Q9KWD2_AGRRH/18-148
| 2.6e-38
|
|
|
| LOG8_ARATH/54-184
| 9.4e-33
|
|
|
| Q9K9A3_BACHD/45-174
| 5.1e-26
|
|
|
| Q99VU1_STAAM/46-176
| 1.6e-25
|
|
|
| Q984W8_RHILO/49-182
| 8e-24
|
|
|
| Q9A8P0_CAUCR/286-415
| 1.8e-19
|
|
|
| Q49952_MYCLE/54-184
| 1.3e-16
|
|
|
| O05306_MYCTU/54-184
| 2.9e-15
|
|
|
| Q9Z588_STRCO/47-175
| 1.3e-10
|
|
|
| Q9RX44_DEIRA/97-227
| 7.8e-10
|
|
|
| Q9CI72_LACLA/1-131
| 7.6e-08
|
|
|
| Q9HY11_PSEAE/129-263
| 3.5e-07
|
|
|
| Q9FBL8_STRCO/116-246
| 6.6e-07
|
|
|
| O67726_AQUAE/84-214
| 8.4e-07
|
|
|
| Q9AA01_CAUCR/119-249
| 5.7e-06
|
|
|
| Q98D62_RHILO/98-228
| 0.002
|
|
|
| YGDH_SHIFL/190-329
| 0.0036
|
|
|
| Q9C6Q0_ARATH/133-276
| 0.0036
|
|
|
| Q9HWR5_PSEAE/192-331
| 0.0073
|
|
|
| Q9CNF7_PASMU/190-329
| 0.052
|
|
|
| Q9X0E5_THEMA/48-167
| 0.067
|
|
|
| Q9PG30_XYLFA/186-325
| 0.093
|
|
|
| Q9KTK3_VIBCH/164-331
| 0.66
|
|
| SCALE
|
| | |
| |
| |
| |
| |
| |
| |
| 1 |
25 |
50 |
75 |
100 |
125 |
150 |
|
|---|
SECTION III: ANNOTATED SEQUENCES
- The positions and p-values of the non-overlapping motif occurrences
are shown above the actual sequence for each of the high-scoring
sequences from Section I.
- A motif occurrence is defined as a position in the sequence whose
match to the motif has POSITION p-value less than 0.0001 as
defined in Section II.
- For each sequence, the first line specifies the name of the sequence.
- The second (and possibly more) lines give a description of the
sequence.
- Following the description line(s) is a line giving the length,
combined p-value, and E-value of the sequence as defined in Section I.
- The next line reproduces the motif diagram from Section II.
- The entire sequence is printed on the following lines.
- Motif occurrences are indicated directly above their positions in the
sequence on lines showing
- the motif number of the occurrence,
- the position p-value of the occurrence,
- the best possible match to the motif, and
- columns whose match to the motif has a positive score (indicated
by a plus sign).
YJF5_YEAST/63-219
LENGTH = 157 COMBINED P-VALUE = 4.25e-49 E-VALUE = 1.4e-47
DIAGRAM: 67-[1]-40
[1]
3.3e-54
MHQRKAMM
++++++++
1 MGKIARSTMGPDLSGQVHGIIPNALVSKERTDEDKEDVNKALLESVENHKGATPISEEYGETTIVPDMHTRKRMM
ANLSDAFIAMPGGYGTLEELFECWTWSQLGIHNKPCGLLNVN
++++++++++++++++++++++++++++++++++++++++++
76 ANLSDAFVAMPGGYGTFEEIMECITWSQLGIHNKPIILFNIDGFYDKLLEFLKHSIQERFISVKNGEIIQVASTP
YVDD_BACSU/46-176
LENGTH = 131 COMBINED P-VALUE = 1.62e-48 E-VALUE = 5.2e-47
DIAGRAM: 41-[1]-40
[1]
1.2e-53
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWTW
++++++++++++++++++++++++++++++++++
1 MGTIADAIMENGGTAIGVMPSGLFSGEVVHQNLTELIEVNGMHERKAKMSELADGFISMPGGFGTYEELFEVLCW
SQLGIHNKPCGLLNVN
++++++++++++++++
76 AQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEGFSNESHLKLIHSSSRPDELIEQM
Y4923_PSEAE/48-178
LENGTH = 131 COMBINED P-VALUE = 2.53e-48 E-VALUE = 8.1e-47
DIAGRAM: 41-[1]-40
[1]
3.4e-53
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWTW
++++++++++++++++++++++++++++++++++
1 MGTVADAALAAGGEVIGIIPQSLQEAEIGHKGLTRLEVVDGMHARKARMAELADAFIALPGGLGTLEELFEVWTW
SQLGIHNKPCGLLNVN
++++++++++++++++
76 GQLGYHAKPLGLLEVNGFYDPLLTFLDHLVDERFVRAEHRGMLQRGASPEALLDAL
FAS6_RHOFA/64-195
LENGTH = 132 COMBINED P-VALUE = 4.24e-48 E-VALUE = 1.4e-46
DIAGRAM: 42-[1]-40
[1]
2.0e-53
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWT
+++++++++++++++++++++++++++++++++
1 MGTLANAALDSGGTVVGVIPESFTAIPEAAHHGLTELHVVHDMHQRKALMAELGDAFIALPGGVGTAEEFFEVLT
WSQLGIHNKPCGLLNVN
+++++++++++++++++
76 WSHLGLHNKPCVLLNDNEYYRPLLSYIEHAAVEGFITPATRSRVIVCKDIEGAIAAI
LOG6_ARATH/63-193
LENGTH = 131 COMBINED P-VALUE = 1.29e-45 E-VALUE = 4.1e-44
DIAGRAM: 41-[1]-40
[1]
2.0e-50
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWTW
++++++ +++++++++ +++++++++++++++++
1 MGLVSQAVHDGGRHVIGVIPKLLMLQELTGETVGEVKEVADMHQRKAVMAKHSDAFITLPGGYGTLEELLEVITW
SQLGIHNKPCGLLNVN
++++++++++++++++
76 AQLGIHDKPVGLLNVDGYYDALLLFIDKAVEEGFILPTARHIIVSAPTARELFIKL
LOGLA_ORYSJ/51-181
LENGTH = 131 COMBINED P-VALUE = 6.36e-45 E-VALUE = 2e-43
DIAGRAM: 41-[1]-40
[1]
1.5e-50
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWTW
++++++++++ +++++++++++++++++++++++
1 MGLVSQAVFDGGRHVIGVIPKTLMTPEISGETVGEVRPVADMHQRKAEMARQSDAFIALPGGYGTLEELLEVITW
SQLGIHNKPCGLLNVN
++++++ +++++++++
76 AQLGIHHKPVGLLNVDGYYNSLLTFIDKAVEEGFINTSARRIIVMAPTAEELMDKL
LOG5_ARATH/53-183
LENGTH = 131 COMBINED P-VALUE = 6.56e-45 E-VALUE = 2.1e-43
DIAGRAM: 41-[1]-40
[1]
1.1e-49
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWTW
+++++++++++++ ++++++++++++++++++ +
1 MGLVSQAVHEAGGHVLGIIPRTLMDKEITGETYGEVIAVADMHERKAEMARHSDCFIALPGGYGTLEELLEVIAW
SQLGIHNKPCGLLNVN
++++++++++++++++
76 AQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIFVSAPNAKELVQKL
LOG2_ARATH/53-183
LENGTH = 131 COMBINED P-VALUE = 3.28e-43 E-VALUE = 1e-41
DIAGRAM: 41-[1]-40
[1]
3.8e-48
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWTW
++++++++ + +++++++++++++++++++++++
1 MGLISQAVHDGGRHVLGIIPKSLAPREITGESIGEVITVSTMHQRKAEMGRQADAFIALPGGYGTFEELLEVITW
SQLGIHNKPCGLLNVN
++++++ +++++++++
76 SQLGIHTKPVGLLNVDGFYDSLLTFIDKAVDEGFVSSTARRIIVSAPNAPQLLQLL
Q9K8C2_BACHD/45-175
LENGTH = 131 COMBINED P-VALUE = 4.44e-40 E-VALUE = 1.4e-38
DIAGRAM: 41-[1]-40
[1]
1.6e-44
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWTW
+++++++++++++++ +++++ ++++++++ ++
1 MGAVADSVLEAGGEVIGVMPRFLEEPEISHPHLTKLIVVETMHERKAKMAELADGFLALPGGPGTLEEFFEIFTW
SQLGIHNKPCGLLNVN
++++++++++++++++
76 AQIGLHQKPCGLLNINHYFDPLVTLLHHMSNEQFLHEKYRSMALVHTDPILLLDQF
Q9KWD2_AGRRH/18-148
LENGTH = 131 COMBINED P-VALUE = 8.04e-40 E-VALUE = 2.6e-38
DIAGRAM: 41-[1]-40
[1]
7.7e-45
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWTW
+++++++++ ++++++++++++++++++++++++
1 MGAIADAARSDGGEVIGVIPRALAEKEIAHTDLADLRVVETMHERKALMAALSDGFIALPGGLGTLEELFEVWTW
SQLGIHNKPCGLLNVN
++++++++++ ++ +
76 AQLGYHNKPCALLDIAGFYKRLDSFLDHVVGEAFLTASHRNILLVEEDAEVLISAM
LOG8_ARATH/54-184
LENGTH = 131 COMBINED P-VALUE = 2.95e-34 E-VALUE = 9.4e-33
DIAGRAM: 41-[1]-40
[1]
1.9e-39
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWTW
++++++ ++ + +++++++++++ +++++ +++
1 MGLISRRVYEGGLHVLGIIPKALMPIEISGETVGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITW
SQLGIHNKPCGLLNVN
++++++++ +++++++
76 SQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKELMEKM
Q9K9A3_BACHD/45-174
LENGTH = 130 COMBINED P-VALUE = 1.59e-27 E-VALUE = 5.1e-26
DIAGRAM: 40-[1]-40
[1]
3.9e-32
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWTWS
+++++ ++ + +++++ ++++ ++++++++ ++
1 MGVLAQSVLDNGGRVTGIIPKKIAENVPSIELSELLIVETMHERKQLMYERSDAFVTLPGGIGTLEELFEIFTWQ
QLGIHNKPCGLLNVN
+++++ +++ ++++
76 QIGYHEKPVAVFNINRFFQPLLQMLDHTVNEGFLSSTCLEQLIVEEDMNTLFDRL
Q99VU1_STAAM/46-176
LENGTH = 131 COMBINED P-VALUE = 4.88e-27 E-VALUE = 1.6e-25
DIAGRAM: 41-[1]-40
[1]
7.0e-32
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWTW
+++++ ++++++++++ +++ + ++++++ +
1 MGAIQDGVLNHGGKAIGVMPKMLDEHEITSQRLTELILVDSMHERKNKMAELADAFVMAPGGAGSLEEFFEMYSW
SQLGIHNKPCGLLNVN
++++++ +++ ++++
76 AQIGIHEKPIAIYNINGFFNPLQTMIDHMIEEGFIDPKYRALAPLCDTKESLIESI
Q984W8_RHILO/49-182
LENGTH = 134 COMBINED P-VALUE = 2.50e-25 E-VALUE = 8e-24
DIAGRAM: 44-[1]-40
[1]
1.5e-30
MHQRKAMMANLSDAFIAMPGGYGTLEELFEC
+++++ ++ + ++++++++++ ++ +++ +
1 MGAVAEGALKAGGKVTGIIPRFLINREATETALDRLDELLITDNMHERKHKMFEKSDAFVALPGGIGTVEEIVEI
WTWSQLGIHNKPCGLLNVN
++++++ + ++++ +++
76 MTWAQLGHHRKPIVFANINGFWDPMTALLDHMTAEGFIHTAQRVKPLVVNDPEAIVAAI
Q9A8P0_CAUCR/286-415
LENGTH = 130 COMBINED P-VALUE = 5.64e-21 E-VALUE = 1.8e-19
DIAGRAM: 40-[1]-40
[1]
1.7e-25
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWTWS
+++++ ++ + +++++ ++++ ++++++ + + +
1 MGATARGAHTAGGAVLGIIPSFLRGREQPFDDVETVVVDNMHERKMMMFERSDAFVVLPGGIGTLEEIVELLSWR
QLGIHNKPCGLLNVN
+ +++++++ +
76 RLDLHQKPIVFHNPGGFWDPLFVLIRHTIDQGLTPPDLANAWRAVERAEDVTPAL
Q49952_MYCLE/54-184
LENGTH = 131 COMBINED P-VALUE = 3.94e-18 E-VALUE = 1.3e-16
DIAGRAM: 41-[1]-40
[1]
1.7e-22
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWTW
+ +++ ++++++ ++++++++ ++++ ++
1 MGAVASAAWTRGGRIVGVIPEMLQRREIADTYVGELIVTETMAERKQVLDDHADAFIVLPGGLGTLDELFEAWTA
SQLGIHNKPCGLLNVN
+ ++ + ++++ +
76 GYLGMHRKPIVMLDPWGHYEGLWAWLHGLIDSGYVSPVAMERLVVVDQVDAALEAC
O05306_MYCTU/54-184
LENGTH = 131 COMBINED P-VALUE = 8.92e-17 E-VALUE = 2.9e-15
DIAGRAM: 41-[1]-40
[1]
2.2e-21
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWTW
+ +++ + +++++ ++++++++ +++ ++
1 MGAVASAARACGGWTVGVIPKMLVYRELADHDADELIVTDTMWERKQIMEDRSDAFIVLPGGVGTLDELFDAWTD
SQLGIHNKPCGLLNVN
+ ++ ++++++
76 GYLGTHDKPIVMVDPWGHFDGLRAWLNGLLDTGYVSPTAMERLVVVDNVKDALRAC
Q9Z588_STRCO/47-175
LENGTH = 129 COMBINED P-VALUE = 4.11e-12 E-VALUE = 1.3e-10
DIAGRAM: 39-[1]-40
[1]
1.4e-15
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWTWSQ
+++++ + +++ + + ++ +++ + + +
1 MKVVADGVQESGGKLLGVSVDFLAAKAREGADEMVIAKDLAERKRLLLEKADAVVIMVGGTGTLDEATEILELKK
LGIHNKPCGLLNVN
+ ++++++++
76 HGHTDKPVVLLNTAGFYDGLKEQFRRMEDEGFLPRPLTELVFFAEEPVGALAYL
Q9RX44_DEIRA/97-227
LENGTH = 131 COMBINED P-VALUE = 2.45e-11 E-VALUE = 7.8e-10
DIAGRAM: 40-[1]-41
[1]
1.4e-15
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWTWS
++++ + ++ + ++++ +++++++ + ++ ++
1 MQAANQGAYEAGGVSVGLNIVLPHEQRHNPYQTLSLEFEYFHARKVMLARYAHAFVAFPGGFGTLDEMMEILTLV
QLGIHNKPCGLLNVN
+ + + +
76 QTRKMRPVPIYFVGEAHWRGLVEWFRTSLVENGAIAADDLKLFKLVDDVSQIPADV
Q9CI72_LACLA/1-131
LENGTH = 131 COMBINED P-VALUE = 2.38e-09 E-VALUE = 7.6e-08
DIAGRAM: 41-[1]-40
[1]
4.7e-13
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWTW
+ +++++ ++ +++ + +++++ ++ + ++
1 MGMVSDAVIRHQGKVIAVYPDGILPLEPPRQNASQLYLTSGMDERKRKLIDLGEAFVILAGGFGTMEESFQLLTE
SQLGIHNKPCGLLNVN
+ + + +
76 MSINQTAVRPVIFVGRKFYQPLFDLLRLQLKEGMISKEVIDAISLVDTAEETIELL
Q9HY11_PSEAE/129-263
LENGTH = 135 COMBINED P-VALUE = 1.09e-08 E-VALUE = 3.5e-07
DIAGRAM: 41-[1]-44
[1]
9.6e-13
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWTW
++ + +++ + +++++++ + +++++
1 MAAAHEGAGLENSLGFNITLPFEQHANHTVDGSGNLLSFHFFFLRKLFFVKEADALVLCPGGFGTLDEALEVLTL
SQLGIHNKPCGLLNVN
+ + + + +
76 VQTGKSPLVPIVLLDQPGGRYWEHALEFMQEQLLENHYILPADMRLMRLVHSAEDAVKEI
Q9FBL8_STRCO/116-246
LENGTH = 131 COMBINED P-VALUE = 2.06e-08 E-VALUE = 6.6e-07
DIAGRAM: 40-[1]-41
[1]
1.6e-12
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWTWS
++ + + + +++ ++++++++ ++++ ++
1 MEAANKGALEAKGTSVGLGIELPFEQGLNPYVDIGLNFRYFFVRKMMFVKYAQGFVVLPGGLGTLDELFEALTLV
QLGIHNKPCGLLNVN
+ + +
76 QTQKVTRFPIVLFGSEYWGGLVDWLRGTLVAQGKAAEKDLMLFHVTDDVDEAVALV
O67726_AQUAE/84-214
LENGTH = 131 COMBINED P-VALUE = 2.63e-08 E-VALUE = 8.4e-07
DIAGRAM: 40-[1]-41
[1]
5.6e-12
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWTWS
++ + + + + + +++++++ ++++ ++
1 MEAANRGAYDSGTESIGLNIDIPREQFPNKYQTKNLKFKYFFVRKVMLLKYAMAYVIFPGGFGTFDELFEALTLI
QLGIHNKPCGLLNVN
+ + + +
76 QTGKSHKFPLILFGSEYYSHLLKFMEEVMVKFGTIDKEDINLMVLVDDPRDVVKHI
Q9AA01_CAUCR/119-249
LENGTH = 131 COMBINED P-VALUE = 1.78e-07 E-VALUE = 5.7e-06
DIAGRAM: 42-[1]-39
[1]
1.1e-11
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWT
++ + + + + +++++++ ++++ ++
1 MEAANRGAFEVGAPSIGFNITLPHEQVPNPYCTPELTFRFHYFAMRKMHLAMRANALVVFPGGFGTFDELFEILT
WSQLGIHNKPCGLLNVN
+ + + ++
76 LRQTDKAPPIPIVLFDEAYWRSIINFEALVEHGMIAASDLELVHFADDAEAVWDKL
Q98D62_RHILO/98-228
LENGTH = 131 COMBINED P-VALUE = 6.24e-05 E-VALUE = 0.002
DIAGRAM: 42-[1]-39
[1]
1.6e-08
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWT
++ + + ++++++ ++++ ++
1 MEAGNRGADDVGAPSIGLNIVLPHEQAPNAYVTPELCFNFHYFAIRKMHFVMRAKAVAVFPGGFGTMDEFFETLT
WSQLGIHNKPCGLLNVN
+ + + +
76 LIQTGRMERVPVILFGKSFWKRAINLDFLAEQGTISPGDQDIIDFVDTADEAWGIV
YGDH_SHIFL/190-329
LENGTH = 140 COMBINED P-VALUE = 1.11e-04 E-VALUE = 0.0036
DIAGRAM: 48-[1]-42
[1]
1.1e-07
MHQRKAMMANLSDAFIAMPGGYGTLEE
+ + + + + +++++++++
1 MEAPMKGAAVGHAQQRYKDSRFIGMTEPSIIAAEPPNPLVNELIIMPDIEKRLEAFVRIAHGIIIFPGGVGTAEE
LFECWTWSQLGIHNKPCGLLNVN
++ + + + +
76 LLYLLGILMNPANKDQVLPLILTGPKESADYFRVLDEFVVHTLGENARRHYRIIIDDAAEVARQM
Q9C6Q0_ARATH/133-276
LENGTH = 144 COMBINED P-VALUE = 1.13e-04 E-VALUE = 0.0036
DIAGRAM: 49-[1]-45
[1]
4.2e-08
MHQRKAMMANLSDAFIAMPGGYGTLE
+ + + ++++++ +++
1 MDAVTEGALEAEKPVGGIKIEKEAGEWTASKFHPYLPPQNYHTCRKHGLVDAVIRNNVSEKTAIIALPGGIGTLD
ELFECWTWSQLGIHNKPCGLLNVN
+ ++ + ++ + +
76 EMFEILALIQLERIGSALPVPFIVMNYDAFYSKLLEFIETCENLGTVSKGEVSALWKVCNNNFEALTYL
Q9HWR5_PSEAE/192-331
LENGTH = 140 COMBINED P-VALUE = 2.27e-04 E-VALUE = 0.0073
DIAGRAM: 48-[1]-42
[1]
1.3e-05
MHQRKAMMANLSDAFIAMPGGYGTLEE
+ + + + + +++ +++++
1 MKGPMKGATISHAKQRIVGGRYLGLTEPGIIAAEAPNPIVNELVILPDIEKRLEAFVRVGHGVIIFPGGAGTAEE
LFECWTWSQLGIHNKPCGLLNVN
++ + +
76 FLYLLGILMHPDNQDLPFPVILTGPRSAEAYLQQLHEFVGATLGHAAQRHYRIVIDDPAEVAKQM
Q9CNF7_PASMU/190-329
LENGTH = 140 COMBINED P-VALUE = 1.64e-03 E-VALUE = 0.052
DIAGRAM: 48-[1]-42
[1]
3.3e-06
MHQRKAMMANLSDAFIAMPGGYGTLEE
+ + + + + +++ +++++
1 MEAPMKGAAIGHANQRYKHSRFIGITEPSIIASEPPNPIVNELIIMPDIEKRLEAFVRMGHGIVIFPGGPGTFEE
LFECWTWSQLGIHNKPCGLLNVN
++ + + +
76 LLYILGIKLAEENKGKTLPLILTGPKESADYFATIDRFIGDTLGKEAQALYDIIIDDPVKVARKM
Q9X0E5_THEMA/48-167
LENGTH = 120 COMBINED P-VALUE = 2.08e-03 E-VALUE = 0.067
DIAGRAM: 38-[1]-32
[1]
1.9e-05
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWTWSQL
+ + ++ ++ + +++ +++ +
1 MELVSQGVREAGGTVVGILPDEEAGNPYLSVAVKTGLDFQMRSFVLLRNADVVVSIGGEIGTAIEILGAYALGKP
GIHNKPCGLLNVN
+ + +
76 VILLRGTGGWTDRISQVLIDGKYLDNRRIVEIHQAWTVEEAVQII
Q9PG30_XYLFA/186-325
LENGTH = 140 COMBINED P-VALUE = 2.92e-03 E-VALUE = 0.093
DIAGRAM: 48-[1]-42
[1]
2.2e-06
MHQRKAMMANLSDAFIAMPGGYGTLEE
+ +++ + + ++++++ ++
1 MKGPMKGATIAHAKQRRHDKRYIGISEPGIIAAESPNPIVNHLVIMPDIEKRLEAFVRLAHGIIVFPGGVGTTEE
LFECWTWSQLGIHNKPCGLLNVN
++ + +
76 ILYLLGLLLREENHGLPFPLILTGPASAAPYFEQIDHFIRLTLGNQAASCYEIVIGDPVAVARKI
Q9KTK3_VIBCH/164-331
LENGTH = 168 COMBINED P-VALUE = 2.05e-02 E-VALUE = 0.66
DIAGRAM: 76-[1]-42
[1]
1.2e-05
MHQRKAMMANLSDAFIAMPGGYGTLEELFECWTWSQLGIHNKPCGLLNVN
+ + + + + +++ +++++++ + +
76 DIEKRLEAFVRMAHGIIIFPGGPGTAEELLYILGIMMHPENADQPMPIVLTGPKQSEAYFRSLDKFITDTLGEAA
Debugging Information
CPU: kodomo.fbb.msu.ru
Time 0.028001 secs.
mast ./log_meme.txt -d ./seed.fasta -ev 10.000000 -mt 0.000100
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Links to Entrez database at NCBI
Links to sequence scores (section I)
Links to motif diagrams (section II)
Links to sequence/motif annotated alignments (section III)
This information