# This output was generated with AUGUSTUS (version 3.1.0). # AUGUSTUS is a gene prediction tool written by Mario Stanke (mario.stanke@uni-greifswald.de), # Oliver Keller, Stefanie König and Lizzy Gerischer. # Please cite: Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler (2008), # Using native and syntenically mapped cDNA alignments to improve de novo gene finding # Bioinformatics 24: 637-644, doi 10.1093/bioinformatics/btn013 # No extrinsic information on sequences given. # arabidopsis version. Using default transition matrix. # We have hints for 0 sequences and for 0 of the sequences in the input set. # # ----- prediction on sequence number 1 (length = 324868, name = NW_003724208.1) ----- # # Constraints/Hints: # (none) # Predicted genes for sequence number 1 on both strands # start gene g1 NW_003724208.1 AUGUSTUS gene 901 1461 0.1 - . g1 NW_003724208.1 AUGUSTUS transcript 901 1461 0.1 - . g1.t1 NW_003724208.1 AUGUSTUS tts 901 901 . - . transcript_id "g1.t1"; gene_id "g1"; NW_003724208.1 AUGUSTUS exon 901 1461 . - . transcript_id "g1.t1"; gene_id "g1"; NW_003724208.1 AUGUSTUS stop_codon 1198 1200 . - 0 transcript_id "g1.t1"; gene_id "g1"; NW_003724208.1 AUGUSTUS single 1198 1443 0.79 - 0 transcript_id "g1.t1"; gene_id "g1"; NW_003724208.1 AUGUSTUS CDS 1198 1443 0.79 - 0 transcript_id "g1.t1"; gene_id "g1"; NW_003724208.1 AUGUSTUS start_codon 1441 1443 . - 0 transcript_id "g1.t1"; gene_id "g1"; NW_003724208.1 AUGUSTUS tss 1461 1461 . - . transcript_id "g1.t1"; gene_id "g1"; # coding sequence = [atgtacatggttagagcagtccctgcaaatgctacagacaacttgtattgtacacttctggcacactcggccattcatg # gagtcatggcagggtacacagggtttgtttctggcccaatcaatggaaactatgcatatattccgatagcagaagtggccaatgccaagaaccctgta # aacacaatggaccacaaatgggcttgggtcagatctgtcaacaatcagccagattttataaagaggtag] # protein sequence = [MYMVRAVPANATDNLYCTLLAHSAIHGVMAGYTGFVSGPINGNYAYIPIAEVANAKNPVNTMDHKWAWVRSVNNQPDF # IKR] # end gene g1 ### # start gene g2 NW_003724208.1 AUGUSTUS gene 13546 14493 0.3 + . g2 NW_003724208.1 AUGUSTUS transcript 13546 14493 0.3 + . g2.t1 NW_003724208.1 AUGUSTUS tss 13546 13546 . + . transcript_id "g2.t1"; gene_id "g2"; NW_003724208.1 AUGUSTUS exon 13546 13572 . + . transcript_id "g2.t1"; gene_id "g2"; NW_003724208.1 AUGUSTUS start_codon 13567 13569 . + 0 transcript_id "g2.t1"; gene_id "g2"; NW_003724208.1 AUGUSTUS initial 13567 13572 0.99 + 0 transcript_id "g2.t1"; gene_id "g2"; NW_003724208.1 AUGUSTUS internal 13673 13784 0.95 + 0 transcript_id "g2.t1"; gene_id "g2"; NW_003724208.1 AUGUSTUS terminal 14059 14321 1 + 2 transcript_id "g2.t1"; gene_id "g2"; NW_003724208.1 AUGUSTUS intron 13573 13672 0.95 + . transcript_id "g2.t1"; gene_id "g2"; NW_003724208.1 AUGUSTUS intron 13785 14058 0.98 + . transcript_id "g2.t1"; gene_id "g2"; NW_003724208.1 AUGUSTUS CDS 13567 13572 0.99 + 0 transcript_id "g2.t1"; gene_id "g2"; NW_003724208.1 AUGUSTUS CDS 13673 13784 0.95 + 0 transcript_id "g2.t1"; gene_id "g2"; NW_003724208.1 AUGUSTUS exon 13673 13784 . + . transcript_id "g2.t1"; gene_id "g2"; NW_003724208.1 AUGUSTUS CDS 14059 14321 1 + 2 transcript_id "g2.t1"; gene_id "g2"; NW_003724208.1 AUGUSTUS exon 14059 14493 . + . transcript_id "g2.t1"; gene_id "g2"; NW_003724208.1 AUGUSTUS stop_codon 14319 14321 . + 0 transcript_id "g2.t1"; gene_id "g2"; NW_003724208.1 AUGUSTUS tts 14493 14493 . + . transcript_id "g2.t1"; gene_id "g2"; # coding sequence = [atgaagcaaaaggtggtactcggtgtctcccttagttacaagaagtcgtggccttgttttcttttcggcgagctcactt # gcccttccaaagctatgaagattgtatccggtttccatggtgttgaatctgtaacatggaaagatgacaagagtaaacttgaggttactggtgagatt # gatccggtttgcctgacaaggaagctgaggaagaaaattggacctataacaataataagcgtggaagaaaagaaagaagaaaagaaggaagaaaagaa # agaagaaaagaaggaagaaaagaagattgaatacattggcactcaatgggttccatgtccgctggtctatgacaattacaaccctgacccctgcacca # tcttataa] # protein sequence = [MKQKVVLGVSLSYKKSWPCFLFGELTCPSKAMKIVSGFHGVESVTWKDDKSKLEVTGEIDPVCLTRKLRKKIGPITII # SVEEKKEEKKEEKKEEKKEEKKIEYIGTQWVPCPLVYDNYNPDPCTIL] # end gene g2 ### # start gene g3 NW_003724208.1 AUGUSTUS gene 17166 18069 0.11 + . g3 NW_003724208.1 AUGUSTUS transcript 17166 18069 0.11 + . g3.t1 NW_003724208.1 AUGUSTUS tss 17166 17166 . + . transcript_id "g3.t1"; gene_id "g3"; NW_003724208.1 AUGUSTUS exon 17166 17252 . + . transcript_id "g3.t1"; gene_id "g3"; NW_003724208.1 AUGUSTUS start_codon 17247 17249 . + 0 transcript_id "g3.t1"; gene_id "g3"; NW_003724208.1 AUGUSTUS initial 17247 17252 0.66 + 0 transcript_id "g3.t1"; gene_id "g3"; NW_003724208.1 AUGUSTUS internal 17483 17594 0.93 + 0 transcript_id "g3.t1"; gene_id "g3"; NW_003724208.1 AUGUSTUS terminal 17699 17961 0.94 + 2 transcript_id "g3.t1"; gene_id "g3"; NW_003724208.1 AUGUSTUS intron 17253 17482 0.65 + . transcript_id "g3.t1"; gene_id "g3"; NW_003724208.1 AUGUSTUS intron 17595 17698 0.93 + . transcript_id "g3.t1"; gene_id "g3"; NW_003724208.1 AUGUSTUS CDS 17247 17252 0.66 + 0 transcript_id "g3.t1"; gene_id "g3"; NW_003724208.1 AUGUSTUS CDS 17483 17594 0.93 + 0 transcript_id "g3.t1"; gene_id "g3"; NW_003724208.1 AUGUSTUS exon 17483 17594 . + . transcript_id "g3.t1"; gene_id "g3"; NW_003724208.1 AUGUSTUS CDS 17699 17961 0.94 + 2 transcript_id "g3.t1"; gene_id "g3"; NW_003724208.1 AUGUSTUS exon 17699 18069 . + . transcript_id "g3.t1"; gene_id "g3"; NW_003724208.1 AUGUSTUS stop_codon 17959 17961 . + 0 transcript_id "g3.t1"; gene_id "g3"; NW_003724208.1 AUGUSTUS tts 18069 18069 . + . transcript_id "g3.t1"; gene_id "g3"; # coding sequence = [atgaagcaaaaggtggtactgagcgtctcccttaattacaagaagaagtgcccatgctttatttttggcaagctcacca # gccattccaaagccttgcagattgcagctggttcatctggagttgaatctgcagcatggaaaggcgaggacaagagtaaactcgaagttagtggtgac # agcatcgatctgattgcactgacaaagaagctgaagaagaaaattggatacacgagtatagtaaccgttgaggaaaagaaagaagagaagaaggaaga # aaagaaggaagaagttccagctctagtataccatccaatggggttcccacagtatcagtattatgagctcccgcccagcaaccatggcttctgcacta # tcttctaa] # protein sequence = [MKQKVVLSVSLNYKKKCPCFIFGKLTSHSKALQIAAGSSGVESAAWKGEDKSKLEVSGDSIDLIALTKKLKKKIGYTS # IVTVEEKKEEKKEEKKEEVPALVYHPMGFPQYQYYELPPSNHGFCTIF] # end gene g3 ### # start gene g4 NW_003724208.1 AUGUSTUS gene 22115 27121 0.03 - . g4 NW_003724208.1 AUGUSTUS transcript 22115 27121 0.03 - . g4.t1 NW_003724208.1 AUGUSTUS tts 22115 22115 . - . transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS exon 22115 22317 . - . transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS stop_codon 22192 22194 . - 0 transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS terminal 22192 22317 1 - 0 transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS internal 22615 22650 1 - 0 transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS internal 22759 22833 0.99 - 0 transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS internal 22927 22980 0.99 - 0 transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS internal 23076 23142 1 - 1 transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS internal 23413 23526 0.98 - 1 transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS internal 23605 23706 1 - 1 transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS internal 23824 23939 0.61 - 0 transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS internal 24011 24021 0.51 - 2 transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS initial 24150 24234 0.46 - 0 transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS intron 22318 22614 1 - . transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS intron 22651 22758 0.99 - . transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS intron 22834 22926 0.98 - . transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS intron 22981 23075 1 - . transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS intron 23143 23412 0.83 - . transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS intron 23527 23604 1 - . transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS intron 23707 23823 0.62 - . transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS intron 23940 24010 0.8 - . transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS intron 24022 24149 0.49 - . transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS CDS 22192 22317 1 - 0 transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS CDS 22615 22650 1 - 0 transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS exon 22615 22650 . - . transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS CDS 22759 22833 0.99 - 0 transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS exon 22759 22833 . - . transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS CDS 22927 22980 0.99 - 0 transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS exon 22927 22980 . - . transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS CDS 23076 23142 1 - 1 transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS exon 23076 23142 . - . transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS CDS 23413 23526 0.98 - 1 transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS exon 23413 23526 . - . transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS CDS 23605 23706 1 - 1 transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS exon 23605 23706 . - . transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS CDS 23824 23939 0.61 - 0 transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS exon 23824 23939 . - . transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS CDS 24011 24021 0.51 - 2 transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS exon 24011 24021 . - . transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS CDS 24150 24234 0.46 - 0 transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS exon 24150 24279 . - . transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS start_codon 24232 24234 . - 0 transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS exon 26947 27121 . - . transcript_id "g4.t1"; gene_id "g4"; NW_003724208.1 AUGUSTUS tss 27121 27121 . - . transcript_id "g4.t1"; gene_id "g4"; # coding sequence = [atggttgatcttttggggcatttgggtggagatctctttctttgtggatggatatatagtaggatagtctcctgcttca # tgcgaacagttaaaaagttctctgaggactttaccatccttctatttcattatgatggtcaaacaactgaatgggatgaatttgagtggtcaaagagg # gccattcatgtgagcgttcggagacaaacaaaatggtggtatgccaaaagatttctgcatcctgacattgtggcgccatatgactatatatttatctg # ggatgaagatctaggagttgagcattttaatgcagaagaatatataagactagtgaggaaatatggcttggagatttcacaacctggtttagaaccta # ataaagggttaacatggcagatgacaaaaagaagaggtgatcgagaagtccacaagtttgttgagatcatggctcctgtattttctagagatgcatgg # cggtgtgtgtggcatatgcttcagaatgacctggcacatggttggggtcttgactttgctcttagaagatgtgtagagcctgcccatgagaaaattgg # agttgtagattctcaatggatcattcatcaaacttttccctcgcttgggaaccaggggcaagcggagaatgggaaggcaccatggcaaggggtgaggg # agaagtgtaaaaaagagtggaccatgtttcgagttcgcatgaccaatgccaaaaaagcatattacaaggagatgggaattaatcctaccaattccaca # gctgaccctcacagaagctga] # protein sequence = [MVDLLGHLGGDLFLCGWIYSRIVSCFMRTVKKFSEDFTILLFHYDGQTTEWDEFEWSKRAIHVSVRRQTKWWYAKRFL # HPDIVAPYDYIFIWDEDLGVEHFNAEEYIRLVRKYGLEISQPGLEPNKGLTWQMTKRRGDREVHKFVEIMAPVFSRDAWRCVWHMLQNDLAHGWGLDF # ALRRCVEPAHEKIGVVDSQWIIHQTFPSLGNQGQAENGKAPWQGVREKCKKEWTMFRVRMTNAKKAYYKEMGINPTNSTADPHRS] # end gene g4 ### # start gene g5 NW_003724208.1 AUGUSTUS gene 27439 27991 0.63 - . g5 NW_003724208.1 AUGUSTUS transcript 27439 27991 0.63 - . g5.t1 NW_003724208.1 AUGUSTUS tts 27439 27439 . - . transcript_id "g5.t1"; gene_id "g5"; NW_003724208.1 AUGUSTUS exon 27439 27991 . - . transcript_id "g5.t1"; gene_id "g5"; NW_003724208.1 AUGUSTUS stop_codon 27579 27581 . - 0 transcript_id "g5.t1"; gene_id "g5"; NW_003724208.1 AUGUSTUS single 27579 27935 1 - 0 transcript_id "g5.t1"; gene_id "g5"; NW_003724208.1 AUGUSTUS CDS 27579 27935 1 - 0 transcript_id "g5.t1"; gene_id "g5"; NW_003724208.1 AUGUSTUS start_codon 27933 27935 . - 0 transcript_id "g5.t1"; gene_id "g5"; NW_003724208.1 AUGUSTUS tss 27991 27991 . - . transcript_id "g5.t1"; gene_id "g5"; # coding sequence = [atggcgtgggggcaaaaccctcttttcctattcctgaccgccgctctccttctcctcaatggaggcttcgccgcccgga # cagaggctctcgccggtggctggcgtccgatcaagaacattagcgacccacgcgtgcaagagatcggagaattcgccgtgacggagcacaacaagcag # gcgacggagagtctgaagttccagagcgtggtctccggcgagactcaggtggtgtcaggcaccaattaccggcttgtggtcgtggcggaggacggcgg # cgtttcgaacaagtatgaagcagttgtttgggagaaaccttggatgggtttcagaaacctcacttcctttacgcgcgtgtag] # protein sequence = [MAWGQNPLFLFLTAALLLLNGGFAARTEALAGGWRPIKNISDPRVQEIGEFAVTEHNKQATESLKFQSVVSGETQVVS # GTNYRLVVVAEDGGVSNKYEAVVWEKPWMGFRNLTSFTRV] # end gene g5 ### # start gene g6 NW_003724208.1 AUGUSTUS gene 30596 34788 0.01 + . g6 NW_003724208.1 AUGUSTUS transcript 30596 34788 0.01 + . g6.t1 NW_003724208.1 AUGUSTUS tss 30596 30596 . + . transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS exon 30596 30643 . + . transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS start_codon 30630 30632 . + 0 transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS initial 30630 30643 0.68 + 0 transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS internal 30733 30879 0.71 + 1 transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS internal 31207 31643 0.39 + 1 transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS internal 31747 31891 0.31 + 2 transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS internal 32107 32235 0.84 + 1 transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS internal 33311 33817 0.2 + 1 transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS terminal 34133 34370 0.19 + 1 transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS intron 30644 30732 0.68 + . transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS intron 30880 31206 0.63 + . transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS intron 31644 31746 0.35 + . transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS intron 31892 32106 0.83 + . transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS intron 32236 33310 0.54 + . transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS intron 33818 34132 0.28 + . transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS CDS 30630 30643 0.68 + 0 transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS CDS 30733 30879 0.71 + 1 transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS exon 30733 30879 . + . transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS CDS 31207 31643 0.39 + 1 transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS exon 31207 31643 . + . transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS CDS 31747 31891 0.31 + 2 transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS exon 31747 31891 . + . transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS CDS 32107 32235 0.84 + 1 transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS exon 32107 32235 . + . transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS CDS 33311 33817 0.2 + 1 transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS exon 33311 33817 . + . transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS CDS 34133 34370 0.19 + 1 transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS exon 34133 34788 . + . transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS stop_codon 34368 34370 . + 0 transcript_id "g6.t1"; gene_id "g6"; NW_003724208.1 AUGUSTUS tts 34788 34788 . + . transcript_id "g6.t1"; gene_id "g6"; # coding sequence = [atggtatcagagcgtttgctgaaaattttagagactaaaaatgcatcatttactctgaaatttggagtcttgatccgta # aatgccttcgattgaggctccgattcaaaccattgcttaagattcatcaatggcaccttaagaacagtcaagatttttacctggttaaaatcggacag # tttaaggatcagcttaggactacaaaaaaaggatctttgaatgttgttgaatatctgtccaaaatcaagagctatgttgattctttagcttcggtcgg # tcacattctcacagataaggaccatattgatgatattctagatgacctcactgatgagtatgatgctttcatcacctccatccttactagatctcaat # ctgatacagtagaagaagttgaattttttattatgacacaagaagctagaattgaaaagaacgcaaaatctcttgattctgcaccaagtgccaatttt # gccttgtcttctactaataatggttttggagatcgtgctagaagcaatttctccaccaattttggtcaaggaagaggtcaaggtattagtcaaggtaa # tggaggtcatttcaatgctggaaactttggtttagacatgaagttgaaaggtgttactacaggtttgatccaagttttgttagtccaacctcctcttc # tcaaaatagtggtggtcatcgtgcttatttcagctaagcctctcctcattcctcaactttgtttacaacacctgaggtctgaaacagtttatactgct # cctctacaactgattcattctgatttatggggtccagctcctatcccttcaagtggtggttatagatactatgttcattttgtggatgcctattctaa # attcacctgatgggtctatagggttaaagaaaatcctaatggtggtgttgaaaaatacaaagccaggttggtagccaagggctttcatcaacaagctg # gatttgattttaatgagacttttagcccaattgtgaaaccaacaactatcaggattgtactcaccattgccttatctagaggttggagtgttaggcaa # ttagatataaatgatgcctttttgaatggtattttacaagaggaagtgtttatgtcacaacctcaaggctttgttgatgagaaacaccctaaatatgt # ttgtagattgcataaagctctctatggactcaagcaggcaccacgagcttggtttgagagacttcacaaagcacttctacagtttggatttgtctctt # ccaaggcagatcaatctctttttttcaggattacatcaacccataccacctacattcttgtctttgtagatgatattttgataactggaagtaatgca # gatgtagtaactactcttattaaactgcctaccaatgagcattggaaggctgtaaaacgcattctaaggtacttaagagcaaccatggattatgaaat # tcatttaaagaaagctgctaagttgagttcagttggattttctgatgctgattggggtttagaccctgatgatagacaatcggtttcaggtcactgta # tcttatttggcataatattgtgtcttggcattctagaaaacaacaagcagtttcccgttccagcatag] # protein sequence = [MVSERLLKILETKNASFTLKFGVLIRKCLRLRLRFKPLLKIHQWHLKNSQDFYLVKIGQFKDQLRTTKKGSLNVVEYL # SKIKSYVDSLASVGHILTDKDHIDDILDDLTDEYDAFITSILTRSQSDTVEEVEFFIMTQEARIEKNAKSLDSAPSANFALSSTNNGFGDRARSNFST # NFGQGRGQGISQGNGGHFNAGNFGLDMKLKGVTTGLIQVLLVQPPLLKIVVVIVLISAKPLLIPQLCLQHLRSETVYTAPLQLIHSDLWGPAPIPSSG # GYRYYVHFVDAYSKFTXWVYRVKENPNGGVEKYKARLVAKGFHQQAGFDFNETFSPIVKPTTIRIVLTIALSRGWSVRQLDINDAFLNGILQEEVFMS # QPQGFVDEKHPKYVCRLHKALYGLKQAPRAWFERLHKALLQFGFVSSKADQSLFFRITSTHTTYILVFVDDILITGSNADVVTTLIKLPTNEHWKAVK # RILRYLRATMDYEIHLKKAAKLSSVGFSDADWGLDPDDRQSVSGHCILFGIILCLGILENNKQFPVPA] # end gene g6 ### # start gene g7 NW_003724208.1 AUGUSTUS gene 36009 36411 0.49 - . g7 NW_003724208.1 AUGUSTUS transcript 36009 36411 0.49 - . g7.t1 NW_003724208.1 AUGUSTUS tts 36009 36009 . - . transcript_id "g7.t1"; gene_id "g7"; NW_003724208.1 AUGUSTUS exon 36009 36411 . - . transcript_id "g7.t1"; gene_id "g7"; NW_003724208.1 AUGUSTUS stop_codon 36054 36056 . - 0 transcript_id "g7.t1"; gene_id "g7"; NW_003724208.1 AUGUSTUS single 36054 36356 0.99 - 0 transcript_id "g7.t1"; gene_id "g7"; NW_003724208.1 AUGUSTUS CDS 36054 36356 0.99 - 0 transcript_id "g7.t1"; gene_id "g7"; NW_003724208.1 AUGUSTUS start_codon 36354 36356 . - 0 transcript_id "g7.t1"; gene_id "g7"; NW_003724208.1 AUGUSTUS tss 36411 36411 . - . transcript_id "g7.t1"; gene_id "g7"; # coding sequence = [atggctcaagtggctcaaggggttcaactgcaatcccaagaatgggttatggtcgagaacaaagattacgatcgagtct # caaagtacgccgtggcggaggaaaatagaaggaaaggagggcacttgaaattcaagtgcgtgattaagggatcgaagatcaatcagtggggtatcaca # ctgtacaacctcattattgaagccacaaatgacaaccagtaccaagcatttgtttgggagacgcagtctgataaggggctcatatccttcctacagtt # gccagggaatgatggtggccgagcttag] # protein sequence = [MAQVAQGVQLQSQEWVMVENKDYDRVSKYAVAEENRRKGGHLKFKCVIKGSKINQWGITLYNLIIEATNDNQYQAFVW # ETQSDKGLISFLQLPGNDGGRA] # end gene g7 ### # start gene g8 NW_003724208.1 AUGUSTUS gene 40106 43076 0.2 + . g8 NW_003724208.1 AUGUSTUS transcript 40106 43076 0.2 + . g8.t1 NW_003724208.1 AUGUSTUS tss 40106 40106 . + . transcript_id "g8.t1"; gene_id "g8"; NW_003724208.1 AUGUSTUS exon 40106 40255 . + . transcript_id "g8.t1"; gene_id "g8"; NW_003724208.1 AUGUSTUS exon 40535 41033 . + . transcript_id "g8.t1"; gene_id "g8"; NW_003724208.1 AUGUSTUS start_codon 40558 40560 . + 0 transcript_id "g8.t1"; gene_id "g8"; NW_003724208.1 AUGUSTUS initial 40558 41033 0.79 + 0 transcript_id "g8.t1"; gene_id "g8"; NW_003724208.1 AUGUSTUS internal 41173 41917 0.42 + 1 transcript_id "g8.t1"; gene_id "g8"; NW_003724208.1 AUGUSTUS internal 41978 42164 0.87 + 0 transcript_id "g8.t1"; gene_id "g8"; NW_003724208.1 AUGUSTUS terminal 42776 42951 0.93 + 2 transcript_id "g8.t1"; gene_id "g8"; NW_003724208.1 AUGUSTUS intron 41034 41172 0.42 + . transcript_id "g8.t1"; gene_id "g8"; NW_003724208.1 AUGUSTUS intron 41918 41977 1 + . transcript_id "g8.t1"; gene_id "g8"; NW_003724208.1 AUGUSTUS intron 42165 42775 0.87 + . transcript_id "g8.t1"; gene_id "g8"; NW_003724208.1 AUGUSTUS CDS 40558 41033 0.79 + 0 transcript_id "g8.t1"; gene_id "g8"; NW_003724208.1 AUGUSTUS CDS 41173 41917 0.42 + 1 transcript_id "g8.t1"; gene_id "g8"; NW_003724208.1 AUGUSTUS exon 41173 41917 . + . transcript_id "g8.t1"; gene_id "g8"; NW_003724208.1 AUGUSTUS CDS 41978 42164 0.87 + 0 transcript_id "g8.t1"; gene_id "g8"; NW_003724208.1 AUGUSTUS exon 41978 42164 . + . transcript_id "g8.t1"; gene_id "g8"; NW_003724208.1 AUGUSTUS CDS 42776 42951 0.93 + 2 transcript_id "g8.t1"; gene_id "g8"; NW_003724208.1 AUGUSTUS exon 42776 43076 . + . transcript_id "g8.t1"; gene_id "g8"; NW_003724208.1 AUGUSTUS stop_codon 42949 42951 . + 0 transcript_id "g8.t1"; gene_id "g8"; NW_003724208.1 AUGUSTUS tts 43076 43076 . + . transcript_id "g8.t1"; gene_id "g8"; # coding sequence = [atgtctgcgacccaagaagtgacctcatctggcccggccggtgatgcttttgaaaaatctgtagataaactgagtgtaa # aggagttccgagaacgtttctgtatcccaaatggcgtgcttgtggattttatggacgatgaagaggtcgtgtctactgagaaagccgaaggccgtgcc # atcaccttctcaaatgagcaatttaacgctgggctccgattccctctcccggcgctgttcaaggaattcctccattttactcagatcccaccagcctt # catccacctcaatacagtccgggtgctgatgggatgcagcattctaaacatgctgttcaaccttgacctttcgctgttggaggttctttttgtttact # ccctgaagaagggaaaaaatgatatcttcagtatggccgcccatctgccctctcttcaattggtgactgagttgccagattcgacgaaaggaggggcg # aagggttttgtcggaacttatctttggtttgttgataatgcaggctcggacaggaggggtcacatagttgagtgggtagagaaagcgtcttttgttcg # attgaataagttgttcgaaattactgccgccgagaggcagtatgcaacgctgctcactgcgcggaacctgatggctgttgtctgggagtcccgtgagt # atgtcatcaatattctccccaggaagctgccaaagaaggtagtgcctggggagcattacattctgaaagaccttcctttctacaaggaggtgcaacag # gcggacgctgagaaacgtcgagcgctccttgacgatcgggagaggagaaaaaaggagggaaccttacggaaggctccggggcaaaaacggtccgcgtc # ctcccctcctgctggcgctccagcgaagaagaaaaagaagacttctgagaagggaaaggaagtggaaatcccccctcctccaaaggaggttgtaattc # ctccttcaacctatgtgaaagaggtaacaataaaggagccggaaaatcctgtcccagtttctgtttcaagcggacccggacatcttgcgggtctgaac # cactccggtctctcaatgtcggcggctggccgtttggccctagtggtagaagaagctacgtcaataaaccaacctagctctcctcatccagatgcaga # tgcagcggaggcttcttgtgcggccgtatcgcctcctatggcaaccccaatggaggaaatgagggggccagcctcaaggagaccgagttcggcgcgga # acctaaagtccggcctcctcgggcagcttcaagatcgattccaggagaccatcgaagtcagttgctcatccgttcaggatgaccatactgaggggagc # gagacggagatggcaactgagaccccagccgtctcgatggtggtcccggatgaggcgcaaaaagaagagctggagggcgagtttgctgcggagagaga # ggaacttgaagcggactaccaaaatcaagtggatgatatgttcttcttcggctatcgctacagtatgaagaaaaatggcattaaacgtgatgtccctt # caattcctccgggtgaagagaaagaagctacttga] # protein sequence = [MSATQEVTSSGPAGDAFEKSVDKLSVKEFRERFCIPNGVLVDFMDDEEVVSTEKAEGRAITFSNEQFNAGLRFPLPAL # FKEFLHFTQIPPAFIHLNTVRVLMGCSILNMLFNLDLSLLEVLFVYSLKKGKNDIFSMAAHLPSLQLVTELPDSTKGGAKGFVGTYLWFVDNAGSDRR # GHIVEWVEKASFVRLNKLFEITAAERQYATLLTARNLMAVVWESREYVINILPRKLPKKVVPGEHYILKDLPFYKEVQQADAEKRRALLDDRERRKKE # GTLRKAPGQKRSASSPPAGAPAKKKKKTSEKGKEVEIPPPPKEVVIPPSTYVKEVTIKEPENPVPVSVSSGPGHLAGLNHSGLSMSAAGRLALVVEEA # TSINQPSSPHPDADAAEASCAAVSPPMATPMEEMRGPASRRPSSARNLKSGLLGQLQDRFQETIEVSCSSVQDDHTEGSETEMATETPAVSMVVPDEA # QKEELEGEFAAEREELEADYQNQVDDMFFFGYRYSMKKNGIKRDVPSIPPGEEKEAT] # end gene g8 ### # start gene g9 NW_003724208.1 AUGUSTUS gene 43086 49561 0.05 - . g9 NW_003724208.1 AUGUSTUS transcript 43086 49561 0.02 - . g9.t1 NW_003724208.1 AUGUSTUS tts 43086 43086 . - . transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 43086 43240 . - . transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS stop_codon 43205 43207 . - 0 transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS terminal 43205 43240 0.79 - 0 transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS internal 43317 43946 0.74 - 0 transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS internal 44161 44642 0.49 - 2 transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS internal 44727 45109 0.62 - 1 transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS internal 45200 45872 0.26 - 2 transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS internal 45934 46261 0.2 - 0 transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS internal 46724 47474 0.28 - 1 transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS internal 47553 48489 0.49 - 2 transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS internal 48586 48797 0.68 - 1 transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS initial 49361 49500 0.95 - 0 transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS intron 43241 43316 0.79 - . transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS intron 43947 44160 0.59 - . transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS intron 44643 44726 0.83 - . transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS intron 45110 45199 0.67 - . transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS intron 45873 45933 0.36 - . transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS intron 46262 46723 0.11 - . transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS intron 47475 47552 0.78 - . transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS intron 48490 48585 0.64 - . transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS intron 48798 49360 0.71 - . transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 43205 43240 0.79 - 0 transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 43317 43946 0.74 - 0 transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 43317 43946 . - . transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 44161 44642 0.49 - 2 transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 44161 44642 . - . transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 44727 45109 0.62 - 1 transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 44727 45109 . - . transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 45200 45872 0.26 - 2 transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 45200 45872 . - . transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 45934 46261 0.2 - 0 transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 45934 46261 . - . transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 46724 47474 0.28 - 1 transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 46724 47474 . - . transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 47553 48489 0.49 - 2 transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 47553 48489 . - . transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 48586 48797 0.68 - 1 transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 48586 48797 . - . transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 49361 49500 0.95 - 0 transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 49361 49561 . - . transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS start_codon 49498 49500 . - 0 transcript_id "g9.t1"; gene_id "g9"; NW_003724208.1 AUGUSTUS tss 49561 49561 . - . transcript_id "g9.t1"; gene_id "g9"; # coding sequence = [atggctcaagtgctagtcggcagctttgtttggatcgaggacgtggaggatccgaaggtgcaagaagttgcaaagttca # ccgtgatggagaaaaatgggcaggcttcatggcacctgaaatataagagcgtggttatgggggtgcgtccggacaccccgtccgaacgccttttgcaa # gtggagcaactgaatcaagaacctatattggttgagatcgtgcgttcatccatttggcaactacgtggatcactagcgacgcgaggcctcaacattgg # cgtcgtctgtgggaaaaattttcatttgattcagtcactagcaaagatggccacaccttcccgaagccgttcatctgaaagattaagagaggaaaacg # ctgtattacgcatccaagcttcaacatcagggcctcctcgtcgtcagcgttcaagaggccaagtagcaaactcaaggccagagccagagtctatatat # cctggaacagcaggagctatcccaggggcatgcaacgtgaggcctcatgagccacacatgcctatgcctcgagctcctcgtgaggaaagctcaaactc # tactcatttctcagcaaaaagccaacgtgacagaaaatctcagttgtcaaattcaatgcgcgcaagactaggcccacaagagcctgggagatcaatgc # taccagtagccacaacctgggcaccacgccctgaccctatggtcacccccatggtgcaaaacatgcacccgcatcgtgaccccatggtcacccccatg # atgcggaacgttcactcgcacctagcggtacaacaagctgggggaaacctctcaagccagccaccaattggttccatcagcaaaaggctagacgacat # gctctccatgcctttctgctctcatatcattcattacgagcctccaaagggattcctcgtaccaaaattttccacatacgatgggtccaacgacccct # tcgatcatatcgtgcattatcgacagctcatgacgctcgatattggcaacgacgcactactgtgtaaagtgtttcccgccagcctacaaggacagacc # ctctcatggtttcatcgcctacctcccaactctgttggcaatttcagggacctatccgaagcttttgtgggacaatacttatgctccgctcgacacaa # gcagaacatcagcactctgcaaaacataaaaatgcaagataacgaatccttaagggagtttgtgaagcgatttggtcaggccgtactccaggtagagg # cttgcagcatggatgctgtcctacagatcttcaaacgtgccaacaaatattcaatgctcgaagatgacgtgcgtgcagccacccagcaagttttggtt # gccggacggccatctagaggtgatgcggaaagaaatgctaaacctccggaccggccaaggccgtccgatcgaaggcaggagggaccgagtcgcccgga # taggccgcccctcacgcctctttccatatcatatgaaaaacttctccctatgatccaaggcctgtctgacttcaggtggcccaaaccccaaggaacgg # acccatccacaagggatcatagcaagagatgtgccttccacaaggaacacgatcacacgacagaaacatgcagaagcctccagtatctggtcgagagg # ctcatcatggcaggacatctaaagcaatacctccgctcaaatgctggaggaaaagtcacttcccaacatcacaaccctggagcccccagggccccagc # cgcccccaaggccgttataaactatattaacggaggtccatctgacgaggagtacgactctaggcgaaaaaggcagaagttgttgcgggccgcatcaa # tacgcgaacacatcaattccatccggcctgggctaactggagggggccctcgccccatagatgggacaatcattttcccaccagttgaccccacccgg # acactacagccacatcgcgacaccctcattttgtccctagagataggagacttcgatgtgagacgcatcttggttgacccagacagcttgaccaatct # tgaaagtactcacctcacaaacatcagctccctcatgacaccagaagagacccagagcatacaaaacgcccttagacgtaacatcttcgcatgggcac # atgctgatatgaagggaattcatccctctattacatctcacaagcttaacgtctttccaactgccagacccgtccggcagaagattaggcgctttcac # ccggatagacaaaaaatcatccggattgagattgacaaattgctagaagccggattcatcagagaagtagaatatccgaactggctggcaaacgtagt # ggtggtacccaagaaagaaggaaaatggcgggtgtatcaaatcgtggattctactgctgggcaagggatgctctctttcttggatgccttctccggat # atcatcagatccccatgtccccgtctgacgaggaaaaaatagcattcataacgccacacgacctttattgctacaaagttatgtcattcgggctcaaa # aacgttggcgccacttatcaaagactaatgacaaaaatcttcaaacctctgataggtcacatagtagaggtatatattgatgatatcgtgattaaaag # caaaacccgagaggagcatgttcttcatttacaagaggtttttcaccttttgaagaaatatggcatgaagctgaattcttccaaatgcgcctttggcg # taagtgctgacaaatttctgggttttatggtcagccaaagagggatagaggtcagcccggatcaagtcaaggcagtcatggaaacacctcaccccagg # agtaagaaggaattacagcgcctcacgggcaaactcgtcgcatcagggcgtattatagcccgcttcactgatgaattgcgacccttcttcttggcaat # acgtaaagctggagcaagcggatggacagacagctgtcaaaacgcttttgaaaagattaaacactgtcttatgcagccgcccatcctaagcaacccca # tcccaaaagaaaaattatacatagcattggcagacgtagaaacccggtactcaaaaatggagctaacagccttagcccttcgtagcgctgcccagaag # ctccgcccctatttccaagcccactcggtggtcgtgctgaccgatcaaccccttcgcaacattctgcacaagccagacttaaccggaagaatgctgca # atgggctatcgaattgagcgagtttggaatcgaattccaacccagattgtccatgaaaggccaagtaatggctgacttcgtgctagaatatgcccgaa # ggcctaaccaacaccaggaatcaaatgaaaaagaatggtggactttgctagttgatggagcctcacgatcatcagggtccggagtcgggcttttgcta # cagtccccaaccgacctcgctctggccctatccgtttccaagctccgggtctatagcgattcgcaactcgtagtaagacaagtccagaaagaatacga # agccaatgacgcacgcatgacgcgatatctgactaaagtaagggacaccttacagcgattcaccgaatggacaatcgaaaagatcagacgaaccgaaa # atgggcgcgcagaagccttggctggcatagctgcctccctccccatcaaagaagctattctattgcctgtacatgtgcaaaccaacccttctgtcaca # gaaacctctacttgcaacaccattgaggcaaaccaagcaaacggccaagaatggacgaacagcattacagaatacctccggacagacacacaaggtcc # gggtgcaagctgcccgtttcaccataatcgggggacacttgtacaagcgatccttcacaggaccctaccttcggtgcctaagtcactcagagacccag # tatcttggggcatggatatagtaggacctctcccagccgcacccgcccagaagaaattcctacttgttgccacaaattacttcagtaagtgggtggaa # gctgaagcatatgcaagcatcaaagacaaagatgtcaccaagttcgtatggaaaaatatcgtctgccgttttaaaattccacacaccattatagccga # caatggtccacagtttgatagtattgcgttccggaatttctattcggaactgaacatccggaattcatactctacaccccgttatcctcaaagtaacg # ggcaagcagaagccacaaacaaaactctgatcactgctttaaagaaaatactcgaacaagccaaaggaaagtgggtggaagagttgcccggcgtcctg # tgggcttatcaaaccacacccggacgaccaacaggaaacactccattcgccctcgcatacggaatggatgcagtcatccctaccgaaatagggttacc # cactatccggactgaggcagcaaaacaggatgatgcaagtgaggagttaagaagaaacttggattgggcagatgaagtaagagaaagcgcagccatcc # ggatggcagattatcagcaaagggcatccgcccattacaatcgcaaaggaaattccaagccaactggaaaggaccctatataa] # protein sequence = [MAQVLVGSFVWIEDVEDPKVQEVAKFTVMEKNGQASWHLKYKSVVMGVRPDTPSERLLQVEQLNQEPILVEIVRSSIW # QLRGSLATRGLNIGVVCGKNFHLIQSLAKMATPSRSRSSERLREENAVLRIQASTSGPPRRQRSRGQVANSRPEPESIYPGTAGAIPGACNVRPHEPH # MPMPRAPREESSNSTHFSAKSQRDRKSQLSNSMRARLGPQEPGRSMLPVATTWAPRPDPMVTPMVQNMHPHRDPMVTPMMRNVHSHLAVQQAGGNLSS # QPPIGSISKRLDDMLSMPFCSHIIHYEPPKGFLVPKFSTYDGSNDPFDHIVHYRQLMTLDIGNDALLCKVFPASLQGQTLSWFHRLPPNSVGNFRDLS # EAFVGQYLCSARHKQNISTLQNIKMQDNESLREFVKRFGQAVLQVEACSMDAVLQIFKRANKYSMLEDDVRAATQQVLVAGRPSRGDAERNAKPPDRP # RPSDRRQEGPSRPDRPPLTPLSISYEKLLPMIQGLSDFRWPKPQGTDPSTRDHSKRCAFHKEHDHTTETCRSLQYLVERLIMAGHLKQYLRSNAGGKV # TSQHHNPGAPRAPAAPKAVINYINGGPSDEEYDSRRKRQKLLRAASIREHINSIRPGLTGGGPRPIDGTIIFPPVDPTRTLQPHRDTLILSLEIGDFD # VRRILVDPDSLTNLESTHLTNISSLMTPEETQSIQNALRRNIFAWAHADMKGIHPSITSHKLNVFPTARPVRQKIRRFHPDRQKIIRIEIDKLLEAGF # IREVEYPNWLANVVVVPKKEGKWRVYQIVDSTAGQGMLSFLDAFSGYHQIPMSPSDEEKIAFITPHDLYCYKVMSFGLKNVGATYQRLMTKIFKPLIG # HIVEVYIDDIVIKSKTREEHVLHLQEVFHLLKKYGMKLNSSKCAFGVSADKFLGFMVSQRGIEVSPDQVKAVMETPHPRSKKELQRLTGKLVASGRII # ARFTDELRPFFLAIRKAGASGWTDSCQNAFEKIKHCLMQPPILSNPIPKEKLYIALADVETRYSKMELTALALRSAAQKLRPYFQAHSVVVLTDQPLR # NILHKPDLTGRMLQWAIELSEFGIEFQPRLSMKGQVMADFVLEYARRPNQHQESNEKEWWTLLVDGASRSSGSGVGLLLQSPTDLALALSVSKLRVYS # DSQLVVRQVQKEYEANDARMTRYLTKVRDTLQRFTEWTIEKIRRTENGRAEALAGIAASLPIKEAILLPVHVQTNPSVTETSTCNTIEANQANGQEWT # NSITEYLRTDTQGPGASCPFHHNRGTLVQAILHRTLPSVPKSLRDPVSWGMDIVGPLPAAPAQKKFLLVATNYFSKWVEAEAYASIKDKDVTKFVWKN # IVCRFKIPHTIIADNGPQFDSIAFRNFYSELNIRNSYSTPRYPQSNGQAEATNKTLITALKKILEQAKGKWVEELPGVLWAYQTTPGRPTGNTPFALA # YGMDAVIPTEIGLPTIRTEAAKQDDASEELRRNLDWADEVRESAAIRMADYQQRASAHYNRKGNSKPTGKDPI] NW_003724208.1 AUGUSTUS transcript 46647 49561 0.01 - . g9.t2 NW_003724208.1 AUGUSTUS tts 46647 46647 . - . transcript_id "g9.t2"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 46647 47474 . - . transcript_id "g9.t2"; gene_id "g9"; NW_003724208.1 AUGUSTUS stop_codon 46718 46720 . - 0 transcript_id "g9.t2"; gene_id "g9"; NW_003724208.1 AUGUSTUS terminal 46718 47474 0.3 - 1 transcript_id "g9.t2"; gene_id "g9"; NW_003724208.1 AUGUSTUS internal 47553 48489 0.49 - 2 transcript_id "g9.t2"; gene_id "g9"; NW_003724208.1 AUGUSTUS internal 48586 48797 0.68 - 1 transcript_id "g9.t2"; gene_id "g9"; NW_003724208.1 AUGUSTUS initial 49361 49500 0.95 - 0 transcript_id "g9.t2"; gene_id "g9"; NW_003724208.1 AUGUSTUS intron 47475 47552 0.78 - . transcript_id "g9.t2"; gene_id "g9"; NW_003724208.1 AUGUSTUS intron 48490 48585 0.64 - . transcript_id "g9.t2"; gene_id "g9"; NW_003724208.1 AUGUSTUS intron 48798 49360 0.71 - . transcript_id "g9.t2"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 46718 47474 0.3 - 1 transcript_id "g9.t2"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 47553 48489 0.49 - 2 transcript_id "g9.t2"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 47553 48489 . - . transcript_id "g9.t2"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 48586 48797 0.68 - 1 transcript_id "g9.t2"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 48586 48797 . - . transcript_id "g9.t2"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 49361 49500 0.95 - 0 transcript_id "g9.t2"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 49361 49561 . - . transcript_id "g9.t2"; gene_id "g9"; NW_003724208.1 AUGUSTUS start_codon 49498 49500 . - 0 transcript_id "g9.t2"; gene_id "g9"; NW_003724208.1 AUGUSTUS tss 49561 49561 . - . transcript_id "g9.t2"; gene_id "g9"; # coding sequence = [atggctcaagtgctagtcggcagctttgtttggatcgaggacgtggaggatccgaaggtgcaagaagttgcaaagttca # ccgtgatggagaaaaatgggcaggcttcatggcacctgaaatataagagcgtggttatgggggtgcgtccggacaccccgtccgaacgccttttgcaa # gtggagcaactgaatcaagaacctatattggttgagatcgtgcgttcatccatttggcaactacgtggatcactagcgacgcgaggcctcaacattgg # cgtcgtctgtgggaaaaattttcatttgattcagtcactagcaaagatggccacaccttcccgaagccgttcatctgaaagattaagagaggaaaacg # ctgtattacgcatccaagcttcaacatcagggcctcctcgtcgtcagcgttcaagaggccaagtagcaaactcaaggccagagccagagtctatatat # cctggaacagcaggagctatcccaggggcatgcaacgtgaggcctcatgagccacacatgcctatgcctcgagctcctcgtgaggaaagctcaaactc # tactcatttctcagcaaaaagccaacgtgacagaaaatctcagttgtcaaattcaatgcgcgcaagactaggcccacaagagcctgggagatcaatgc # taccagtagccacaacctgggcaccacgccctgaccctatggtcacccccatggtgcaaaacatgcacccgcatcgtgaccccatggtcacccccatg # atgcggaacgttcactcgcacctagcggtacaacaagctgggggaaacctctcaagccagccaccaattggttccatcagcaaaaggctagacgacat # gctctccatgcctttctgctctcatatcattcattacgagcctccaaagggattcctcgtaccaaaattttccacatacgatgggtccaacgacccct # tcgatcatatcgtgcattatcgacagctcatgacgctcgatattggcaacgacgcactactgtgtaaagtgtttcccgccagcctacaaggacagacc # ctctcatggtttcatcgcctacctcccaactctgttggcaatttcagggacctatccgaagcttttgtgggacaatacttatgctccgctcgacacaa # gcagaacatcagcactctgcaaaacataaaaatgcaagataacgaatccttaagggagtttgtgaagcgatttggtcaggccgtactccaggtagagg # cttgcagcatggatgctgtcctacagatcttcaaacgtgccaacaaatattcaatgctcgaagatgacgtgcgtgcagccacccagcaagttttggtt # gccggacggccatctagaggtgatgcggaaagaaatgctaaacctccggaccggccaaggccgtccgatcgaaggcaggagggaccgagtcgcccgga # taggccgcccctcacgcctctttccatatcatatgaaaaacttctccctatgatccaaggcctgtctgacttcaggtggcccaaaccccaaggaacgg # acccatccacaagggatcatagcaagagatgtgccttccacaaggaacacgatcacacgacagaaacatgcagaagcctccagtatctggtcgagagg # ctcatcatggcaggacatctaaagcaatacctccgctcaaatgctggaggaaaagtcacttcccaacatcacaaccctggagcccccagggccccagc # cgcccccaaggccgttataaactatattaacggaggtccatctgacgaggagtacgactctaggcgaaaaaggcagaagttgttgcgggccgcatcaa # tacgcgaacacatcaattccatccggcctgggctaactggagggggccctcgccccatagatgggacaatcattttcccaccagttgaccccacccgg # acactacagccacatcgcgacaccctcattttgtccctagagataggagacttcgatgtgagacgcatcttggttgacccagacagcttgaccaatct # tgtataa] # protein sequence = [MAQVLVGSFVWIEDVEDPKVQEVAKFTVMEKNGQASWHLKYKSVVMGVRPDTPSERLLQVEQLNQEPILVEIVRSSIW # QLRGSLATRGLNIGVVCGKNFHLIQSLAKMATPSRSRSSERLREENAVLRIQASTSGPPRRQRSRGQVANSRPEPESIYPGTAGAIPGACNVRPHEPH # MPMPRAPREESSNSTHFSAKSQRDRKSQLSNSMRARLGPQEPGRSMLPVATTWAPRPDPMVTPMVQNMHPHRDPMVTPMMRNVHSHLAVQQAGGNLSS # QPPIGSISKRLDDMLSMPFCSHIIHYEPPKGFLVPKFSTYDGSNDPFDHIVHYRQLMTLDIGNDALLCKVFPASLQGQTLSWFHRLPPNSVGNFRDLS # EAFVGQYLCSARHKQNISTLQNIKMQDNESLREFVKRFGQAVLQVEACSMDAVLQIFKRANKYSMLEDDVRAATQQVLVAGRPSRGDAERNAKPPDRP # RPSDRRQEGPSRPDRPPLTPLSISYEKLLPMIQGLSDFRWPKPQGTDPSTRDHSKRCAFHKEHDHTTETCRSLQYLVERLIMAGHLKQYLRSNAGGKV # TSQHHNPGAPRAPAAPKAVINYINGGPSDEEYDSRRKRQKLLRAASIREHINSIRPGLTGGGPRPIDGTIIFPPVDPTRTLQPHRDTLILSLEIGDFD # VRRILVDPDSLTNLV] NW_003724208.1 AUGUSTUS transcript 43086 46321 0.01 - . g9.t3 NW_003724208.1 AUGUSTUS tts 43086 43086 . - . transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 43086 43240 . - . transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS stop_codon 43205 43207 . - 0 transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS terminal 43205 43240 0.79 - 0 transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS internal 43317 43946 0.74 - 0 transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS internal 44161 44642 0.49 - 2 transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS internal 44727 45109 0.62 - 1 transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS internal 45200 45872 0.26 - 2 transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS initial 45934 46228 0.24 - 0 transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS intron 43241 43316 0.79 - . transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS intron 43947 44160 0.59 - . transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS intron 44643 44726 0.83 - . transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS intron 45110 45199 0.67 - . transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS intron 45873 45933 0.36 - . transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 43205 43240 0.79 - 0 transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 43317 43946 0.74 - 0 transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 43317 43946 . - . transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 44161 44642 0.49 - 2 transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 44161 44642 . - . transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 44727 45109 0.62 - 1 transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 44727 45109 . - . transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 45200 45872 0.26 - 2 transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 45200 45872 . - . transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 45934 46228 0.24 - 0 transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 45934 46321 . - . transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS start_codon 46226 46228 . - 0 transcript_id "g9.t3"; gene_id "g9"; NW_003724208.1 AUGUSTUS tss 46321 46321 . - . transcript_id "g9.t3"; gene_id "g9"; # coding sequence = [atgacaccagaagagacccagagcatacaaaacgcccttagacgtaacatcttcgcatgggcacatgctgatatgaagg # gaattcatccctctattacatctcacaagcttaacgtctttccaactgccagacccgtccggcagaagattaggcgctttcacccggatagacaaaaa # atcatccggattgagattgacaaattgctagaagccggattcatcagagaagtagaatatccgaactggctggcaaacgtagtggtggtacccaagaa # agaaggaaaatggcgggtgtatcaaatcgtggattctactgctgggcaagggatgctctctttcttggatgccttctccggatatcatcagatcccca # tgtccccgtctgacgaggaaaaaatagcattcataacgccacacgacctttattgctacaaagttatgtcattcgggctcaaaaacgttggcgccact # tatcaaagactaatgacaaaaatcttcaaacctctgataggtcacatagtagaggtatatattgatgatatcgtgattaaaagcaaaacccgagagga # gcatgttcttcatttacaagaggtttttcaccttttgaagaaatatggcatgaagctgaattcttccaaatgcgcctttggcgtaagtgctgacaaat # ttctgggttttatggtcagccaaagagggatagaggtcagcccggatcaagtcaaggcagtcatggaaacacctcaccccaggagtaagaaggaatta # cagcgcctcacgggcaaactcgtcgcatcagggcgtattatagcccgcttcactgatgaattgcgacccttcttcttggcaatacgtaaagctggagc # aagcggatggacagacagctgtcaaaacgcttttgaaaagattaaacactgtcttatgcagccgcccatcctaagcaaccccatcccaaaagaaaaat # tatacatagcattggcagacgtagaaacccggtactcaaaaatggagctaacagccttagcccttcgtagcgctgcccagaagctccgcccctatttc # caagcccactcggtggtcgtgctgaccgatcaaccccttcgcaacattctgcacaagccagacttaaccggaagaatgctgcaatgggctatcgaatt # gagcgagtttggaatcgaattccaacccagattgtccatgaaaggccaagtaatggctgacttcgtgctagaatatgcccgaaggcctaaccaacacc # aggaatcaaatgaaaaagaatggtggactttgctagttgatggagcctcacgatcatcagggtccggagtcgggcttttgctacagtccccaaccgac # ctcgctctggccctatccgtttccaagctccgggtctatagcgattcgcaactcgtagtaagacaagtccagaaagaatacgaagccaatgacgcacg # catgacgcgatatctgactaaagtaagggacaccttacagcgattcaccgaatggacaatcgaaaagatcagacgaaccgaaaatgggcgcgcagaag # ccttggctggcatagctgcctccctccccatcaaagaagctattctattgcctgtacatgtgcaaaccaacccttctgtcacagaaacctctacttgc # aacaccattgaggcaaaccaagcaaacggccaagaatggacgaacagcattacagaatacctccggacagacacacaaggtccgggtgcaagctgccc # gtttcaccataatcgggggacacttgtacaagcgatccttcacaggaccctaccttcggtgcctaagtcactcagagacccagtatcttggggcatgg # atatagtaggacctctcccagccgcacccgcccagaagaaattcctacttgttgccacaaattacttcagtaagtgggtggaagctgaagcatatgca # agcatcaaagacaaagatgtcaccaagttcgtatggaaaaatatcgtctgccgttttaaaattccacacaccattatagccgacaatggtccacagtt # tgatagtattgcgttccggaatttctattcggaactgaacatccggaattcatactctacaccccgttatcctcaaagtaacgggcaagcagaagcca # caaacaaaactctgatcactgctttaaagaaaatactcgaacaagccaaaggaaagtgggtggaagagttgcccggcgtcctgtgggcttatcaaacc # acacccggacgaccaacaggaaacactccattcgccctcgcatacggaatggatgcagtcatccctaccgaaatagggttacccactatccggactga # ggcagcaaaacaggatgatgcaagtgaggagttaagaagaaacttggattgggcagatgaagtaagagaaagcgcagccatccggatggcagattatc # agcaaagggcatccgcccattacaatcgcaaaggaaattccaagccaactggaaaggaccctatataa] # protein sequence = [MTPEETQSIQNALRRNIFAWAHADMKGIHPSITSHKLNVFPTARPVRQKIRRFHPDRQKIIRIEIDKLLEAGFIREVE # YPNWLANVVVVPKKEGKWRVYQIVDSTAGQGMLSFLDAFSGYHQIPMSPSDEEKIAFITPHDLYCYKVMSFGLKNVGATYQRLMTKIFKPLIGHIVEV # YIDDIVIKSKTREEHVLHLQEVFHLLKKYGMKLNSSKCAFGVSADKFLGFMVSQRGIEVSPDQVKAVMETPHPRSKKELQRLTGKLVASGRIIARFTD # ELRPFFLAIRKAGASGWTDSCQNAFEKIKHCLMQPPILSNPIPKEKLYIALADVETRYSKMELTALALRSAAQKLRPYFQAHSVVVLTDQPLRNILHK # PDLTGRMLQWAIELSEFGIEFQPRLSMKGQVMADFVLEYARRPNQHQESNEKEWWTLLVDGASRSSGSGVGLLLQSPTDLALALSVSKLRVYSDSQLV # VRQVQKEYEANDARMTRYLTKVRDTLQRFTEWTIEKIRRTENGRAEALAGIAASLPIKEAILLPVHVQTNPSVTETSTCNTIEANQANGQEWTNSITE # YLRTDTQGPGASCPFHHNRGTLVQAILHRTLPSVPKSLRDPVSWGMDIVGPLPAAPAQKKFLLVATNYFSKWVEAEAYASIKDKDVTKFVWKNIVCRF # KIPHTIIADNGPQFDSIAFRNFYSELNIRNSYSTPRYPQSNGQAEATNKTLITALKKILEQAKGKWVEELPGVLWAYQTTPGRPTGNTPFALAYGMDA # VIPTEIGLPTIRTEAAKQDDASEELRRNLDWADEVRESAAIRMADYQQRASAHYNRKGNSKPTGKDPI] NW_003724208.1 AUGUSTUS transcript 43086 46341 0.01 - . g9.t4 NW_003724208.1 AUGUSTUS tts 43086 43086 . - . transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 43086 43240 . - . transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS stop_codon 43205 43207 . - 0 transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS terminal 43205 43240 0.79 - 0 transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS internal 43317 43946 0.74 - 0 transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS internal 44161 44642 0.49 - 2 transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS internal 44727 45109 0.62 - 1 transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS internal 45200 45842 0.21 - 2 transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS initial 45934 46228 0.24 - 0 transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS intron 43241 43316 0.79 - . transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS intron 43947 44160 0.59 - . transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS intron 44643 44726 0.83 - . transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS intron 45110 45199 0.67 - . transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS intron 45843 45933 0.24 - . transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 43205 43240 0.79 - 0 transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 43317 43946 0.74 - 0 transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 43317 43946 . - . transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 44161 44642 0.49 - 2 transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 44161 44642 . - . transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 44727 45109 0.62 - 1 transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 44727 45109 . - . transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 45200 45842 0.21 - 2 transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 45200 45842 . - . transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS CDS 45934 46228 0.24 - 0 transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS exon 45934 46341 . - . transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS start_codon 46226 46228 . - 0 transcript_id "g9.t4"; gene_id "g9"; NW_003724208.1 AUGUSTUS tss 46341 46341 . - . transcript_id "g9.t4"; gene_id "g9"; # coding sequence = [atgacaccagaagagacccagagcatacaaaacgcccttagacgtaacatcttcgcatgggcacatgctgatatgaagg # gaattcatccctctattacatctcacaagcttaacgtctttccaactgccagacccgtccggcagaagattaggcgctttcacccggatagacaaaaa # atcatccggattgagattgacaaattgctagaagccggattcatcagagaagtagaatatccgaactggctggcaaacgtagtggtggtacccaagaa # agaaggaaaatggcgggtgtggatgctctctttcttggatgccttctccggatatcatcagatccccatgtccccgtctgacgaggaaaaaatagcat # tcataacgccacacgacctttattgctacaaagttatgtcattcgggctcaaaaacgttggcgccacttatcaaagactaatgacaaaaatcttcaaa # cctctgataggtcacatagtagaggtatatattgatgatatcgtgattaaaagcaaaacccgagaggagcatgttcttcatttacaagaggtttttca # ccttttgaagaaatatggcatgaagctgaattcttccaaatgcgcctttggcgtaagtgctgacaaatttctgggttttatggtcagccaaagaggga # tagaggtcagcccggatcaagtcaaggcagtcatggaaacacctcaccccaggagtaagaaggaattacagcgcctcacgggcaaactcgtcgcatca # gggcgtattatagcccgcttcactgatgaattgcgacccttcttcttggcaatacgtaaagctggagcaagcggatggacagacagctgtcaaaacgc # ttttgaaaagattaaacactgtcttatgcagccgcccatcctaagcaaccccatcccaaaagaaaaattatacatagcattggcagacgtagaaaccc # ggtactcaaaaatggagctaacagccttagcccttcgtagcgctgcccagaagctccgcccctatttccaagcccactcggtggtcgtgctgaccgat # caaccccttcgcaacattctgcacaagccagacttaaccggaagaatgctgcaatgggctatcgaattgagcgagtttggaatcgaattccaacccag # attgtccatgaaaggccaagtaatggctgacttcgtgctagaatatgcccgaaggcctaaccaacaccaggaatcaaatgaaaaagaatggtggactt # tgctagttgatggagcctcacgatcatcagggtccggagtcgggcttttgctacagtccccaaccgacctcgctctggccctatccgtttccaagctc # cgggtctatagcgattcgcaactcgtagtaagacaagtccagaaagaatacgaagccaatgacgcacgcatgacgcgatatctgactaaagtaaggga # caccttacagcgattcaccgaatggacaatcgaaaagatcagacgaaccgaaaatgggcgcgcagaagccttggctggcatagctgcctccctcccca # tcaaagaagctattctattgcctgtacatgtgcaaaccaacccttctgtcacagaaacctctacttgcaacaccattgaggcaaaccaagcaaacggc # caagaatggacgaacagcattacagaatacctccggacagacacacaaggtccgggtgcaagctgcccgtttcaccataatcgggggacacttgtaca # agcgatccttcacaggaccctaccttcggtgcctaagtcactcagagacccagtatcttggggcatggatatagtaggacctctcccagccgcacccg # cccagaagaaattcctacttgttgccacaaattacttcagtaagtgggtggaagctgaagcatatgcaagcatcaaagacaaagatgtcaccaagttc # gtatggaaaaatatcgtctgccgttttaaaattccacacaccattatagccgacaatggtccacagtttgatagtattgcgttccggaatttctattc # ggaactgaacatccggaattcatactctacaccccgttatcctcaaagtaacgggcaagcagaagccacaaacaaaactctgatcactgctttaaaga # aaatactcgaacaagccaaaggaaagtgggtggaagagttgcccggcgtcctgtgggcttatcaaaccacacccggacgaccaacaggaaacactcca # ttcgccctcgcatacggaatggatgcagtcatccctaccgaaatagggttacccactatccggactgaggcagcaaaacaggatgatgcaagtgagga # gttaagaagaaacttggattgggcagatgaagtaagagaaagcgcagccatccggatggcagattatcagcaaagggcatccgcccattacaatcgca # aaggaaattccaagccaactggaaaggaccctatataa] # protein sequence = [MTPEETQSIQNALRRNIFAWAHADMKGIHPSITSHKLNVFPTARPVRQKIRRFHPDRQKIIRIEIDKLLEAGFIREVE # YPNWLANVVVVPKKEGKWRVWMLSFLDAFSGYHQIPMSPSDEEKIAFITPHDLYCYKVMSFGLKNVGATYQRLMTKIFKPLIGHIVEVYIDDIVIKSK # TREEHVLHLQEVFHLLKKYGMKLNSSKCAFGVSADKFLGFMVSQRGIEVSPDQVKAVMETPHPRSKKELQRLTGKLVASGRIIARFTDELRPFFLAIR # KAGASGWTDSCQNAFEKIKHCLMQPPILSNPIPKEKLYIALADVETRYSKMELTALALRSAAQKLRPYFQAHSVVVLTDQPLRNILHKPDLTGRMLQW # AIELSEFGIEFQPRLSMKGQVMADFVLEYARRPNQHQESNEKEWWTLLVDGASRSSGSGVGLLLQSPTDLALALSVSKLRVYSDSQLVVRQVQKEYEA # NDARMTRYLTKVRDTLQRFTEWTIEKIRRTENGRAEALAGIAASLPIKEAILLPVHVQTNPSVTETSTCNTIEANQANGQEWTNSITEYLRTDTQGPG # ASCPFHHNRGTLVQAILHRTLPSVPKSLRDPVSWGMDIVGPLPAAPAQKKFLLVATNYFSKWVEAEAYASIKDKDVTKFVWKNIVCRFKIPHTIIADN # GPQFDSIAFRNFYSELNIRNSYSTPRYPQSNGQAEATNKTLITALKKILEQAKGKWVEELPGVLWAYQTTPGRPTGNTPFALAYGMDAVIPTEIGLPT # IRTEAAKQDDASEELRRNLDWADEVRESAAIRMADYQQRASAHYNRKGNSKPTGKDPI] # end gene g9 ### # start gene g10 NW_003724208.1 AUGUSTUS gene 52640 56141 0.33 - . g10 NW_003724208.1 AUGUSTUS transcript 52640 56141 0.33 - . g10.t1 NW_003724208.1 AUGUSTUS tts 52640 52640 . - . transcript_id "g10.t1"; gene_id "g10"; NW_003724208.1 AUGUSTUS exon 52640 52926 . - . transcript_id "g10.t1"; gene_id "g10"; NW_003724208.1 AUGUSTUS exon 55638 56141 . - . transcript_id "g10.t1"; gene_id "g10"; NW_003724208.1 AUGUSTUS stop_codon 55639 55641 . - 0 transcript_id "g10.t1"; gene_id "g10"; NW_003724208.1 AUGUSTUS single 55639 56079 0.98 - 0 transcript_id "g10.t1"; gene_id "g10"; NW_003724208.1 AUGUSTUS CDS 55639 56079 0.98 - 0 transcript_id "g10.t1"; gene_id "g10"; NW_003724208.1 AUGUSTUS start_codon 56077 56079 . - 0 transcript_id "g10.t1"; gene_id "g10"; NW_003724208.1 AUGUSTUS tss 56141 56141 . - . transcript_id "g10.t1"; gene_id "g10"; # coding sequence = [atggctcaggttcagctccaccgccacacggctcccctgaaactcgacggagcaatgactcacatggatctgggcggaa # tcataactcaactggaaggtgacaaatggattcggaaccacaatgtatttcagctgcaattattgggagagttcgccgtgaaggagaaaaacaggaag # gcgaactggcacctggaattcattaacgtgtacgaggggtggtatcagcgcctctccagaggccgcggccgcattcacctactccatcttgtagccaa # acacgaagacgtcttgaccaactacgaggcatatgtttgggagaaggtcgatcgtcctctggattgggagaaggtcgatcgtcctctggattggaaga # ggatggatcttcctctggagctcaggtccctttctcctatggtccttgatgaagaccccagcgcttaa] # protein sequence = [MAQVQLHRHTAPLKLDGAMTHMDLGGIITQLEGDKWIRNHNVFQLQLLGEFAVKEKNRKANWHLEFINVYEGWYQRLS # RGRGRIHLLHLVAKHEDVLTNYEAYVWEKVDRPLDWEKVDRPLDWKRMDLPLELRSLSPMVLDEDPSA] # end gene g10 ### # start gene g11 NW_003724208.1 AUGUSTUS gene 58426 67231 0.03 - . g11 NW_003724208.1 AUGUSTUS transcript 58426 67231 0.03 - . g11.t1 NW_003724208.1 AUGUSTUS tts 58426 58426 . - . transcript_id "g11.t1"; gene_id "g11"; NW_003724208.1 AUGUSTUS exon 58426 58895 . - . transcript_id "g11.t1"; gene_id "g11"; NW_003724208.1 AUGUSTUS stop_codon 58595 58597 . - 0 transcript_id "g11.t1"; gene_id "g11"; NW_003724208.1 AUGUSTUS terminal 58595 58895 0.97 - 1 transcript_id "g11.t1"; gene_id "g11"; NW_003724208.1 AUGUSTUS internal 58969 59221 0.34 - 2 transcript_id "g11.t1"; gene_id "g11"; NW_003724208.1 AUGUSTUS internal 59441 59784 0.66 - 1 transcript_id "g11.t1"; gene_id "g11"; NW_003724208.1 AUGUSTUS initial 59857 59891 1 - 0 transcript_id "g11.t1"; gene_id "g11"; NW_003724208.1 AUGUSTUS intron 58896 58968 0.78 - . transcript_id "g11.t1"; gene_id "g11"; NW_003724208.1 AUGUSTUS intron 59222 59440 0.34 - . transcript_id "g11.t1"; gene_id "g11"; NW_003724208.1 AUGUSTUS intron 59785 59856 0.97 - . transcript_id "g11.t1"; gene_id "g11"; NW_003724208.1 AUGUSTUS CDS 58595 58895 0.97 - 1 transcript_id "g11.t1"; gene_id "g11"; NW_003724208.1 AUGUSTUS CDS 58969 59221 0.34 - 2 transcript_id "g11.t1"; gene_id "g11"; NW_003724208.1 AUGUSTUS exon 58969 59221 . - . transcript_id "g11.t1"; gene_id "g11"; NW_003724208.1 AUGUSTUS CDS 59441 59784 0.66 - 1 transcript_id "g11.t1"; gene_id "g11"; NW_003724208.1 AUGUSTUS exon 59441 59784 . - . transcript_id "g11.t1"; gene_id "g11"; NW_003724208.1 AUGUSTUS CDS 59857 59891 1 - 0 transcript_id "g11.t1"; gene_id "g11"; NW_003724208.1 AUGUSTUS exon 59857 59927 . - . transcript_id "g11.t1"; gene_id "g11"; NW_003724208.1 AUGUSTUS start_codon 59889 59891 . - 0 transcript_id "g11.t1"; gene_id "g11"; NW_003724208.1 AUGUSTUS exon 67171 67231 . - . transcript_id "g11.t1"; gene_id "g11"; NW_003724208.1 AUGUSTUS tss 67231 67231 . - . transcript_id "g11.t1"; gene_id "g11"; # coding sequence = [atggatgctcttgaaggccaatctggggtcgacacgtggtggtctggccgttttgaggagtgcttttgggaaggctgca # gagtagtggtgcagggggtggctgttgctgcagagttggttggaggggcaaatccgggagaaaagaaagctgttacagaggaggagaaggaagaggag # cttttgttgggttactttgggggactagaaggaattgagaaagaaataaaacaaacaaagctgccctcgaacgacgccggcggcttgcctccggcggc # gaagcgcctctgtcatcaccggaacgccaagcaaccacagccatggactcatgatcagcgagggtcccagcttcgtggctctctcaccatcaggcttt # gcaattacaatcccaccaagttttgcaatatcggggactcagattccagagttcacttcaagaataccagggtgactactcgggcaaccagtatgttg # cttttgaccatggccagagggtatttggaggacgccctagtccgcgagcaaaccatgcctttcacccgtttttgtagaggtattccgtcaatggtgaa # catggtcaagcttactgctcacttcccatttgatctatttctctctcacttggtcgtttcattagaatctgttggaccatccaaaattgaaaaagaaa # agggagaattatcacctaatggtgattttgaggaggataatcttgttgtctatggagatgctagtacccaggttgtgcctttggcaaagcacaatcct # ggaagacggccattccgagcgggtgatggacaagagagggattgtcaggttgttggaggagaaagtggtgcagatgctgatgatgaggatggtgaaaa # cgcttctgaggctggtgaagatgtctcagctagtgagtctgcaggtgatgagtgctctcgaggagagtag] # protein sequence = [MDALEGQSGVDTWWSGRFEECFWEGCRVVVQGVAVAAELVGGANPGEKKAVTEEEKEEELLLGYFGGLEGIEKEIKQT # KLPSNDAGGLPPAAKRLCHHRNAKQPQPWTHDQRGSQLRGSLTIRLCNYNPTKFCNIGDSDSRVHFKNTRVTTRATSMLLLTMARGYLEDALVREQTM # PFTRFCRGIPSMVNMVKLTAHFPFDLFLSHLVVSLESVGPSKIEKEKGELSPNGDFEEDNLVVYGDASTQVVPLAKHNPGRRPFRAGDGQERDCQVVG # GESGADADDEDGENASEAGEDVSASESAGDECSRGE] # end gene g11 ### # start gene g12 NW_003724208.1 AUGUSTUS gene 67846 68491 0.22 - . g12 NW_003724208.1 AUGUSTUS transcript 67846 68491 0.22 - . g12.t1 NW_003724208.1 AUGUSTUS tts 67846 67846 . - . transcript_id "g12.t1"; gene_id "g12"; NW_003724208.1 AUGUSTUS exon 67846 68491 . - . transcript_id "g12.t1"; gene_id "g12"; NW_003724208.1 AUGUSTUS stop_codon 67995 67997 . - 0 transcript_id "g12.t1"; gene_id "g12"; NW_003724208.1 AUGUSTUS single 67995 68432 0.97 - 0 transcript_id "g12.t1"; gene_id "g12"; NW_003724208.1 AUGUSTUS CDS 67995 68432 0.97 - 0 transcript_id "g12.t1"; gene_id "g12"; NW_003724208.1 AUGUSTUS start_codon 68430 68432 . - 0 transcript_id "g12.t1"; gene_id "g12"; NW_003724208.1 AUGUSTUS tss 68491 68491 . - . transcript_id "g12.t1"; gene_id "g12"; # coding sequence = [atggctcaggtgcaaccctaccgcaacatggctcccctgaaactcgacggagcaaatactcagatagatctaggcggaa # aaataactacactggaaagcaaactatggactccgaaccacgacgaagatctgctgcaattgttgggaatgttctccgtgatggagcacaacagggag # aagggctgcagtctgaaattcgttaacacgtatgaagggtggtatcagactctcccccaaaaccgcggcacccttcacaaaatccatcttgtagccac # agacaaaggcgtcccgggcaactacgaagcatgtgtctgggagaagaattgtactcaggattggaagaagatgaatcttcctctggacgcgcacctga # tgaagattcatctggagctcgtgtacttcattcgtctgtgcccggaaatagagccgcgcgcttaa] # protein sequence = [MAQVQPYRNMAPLKLDGANTQIDLGGKITTLESKLWTPNHDEDLLQLLGMFSVMEHNREKGCSLKFVNTYEGWYQTLP # QNRGTLHKIHLVATDKGVPGNYEACVWEKNCTQDWKKMNLPLDAHLMKIHLELVYFIRLCPEIEPRA] # end gene g12 ### # start gene g13 NW_003724208.1 AUGUSTUS gene 70286 71946 0.19 + . g13 NW_003724208.1 AUGUSTUS transcript 70286 71946 0.19 + . g13.t1 NW_003724208.1 AUGUSTUS tss 70286 70286 . + . transcript_id "g13.t1"; gene_id "g13"; NW_003724208.1 AUGUSTUS exon 70286 70809 . + . transcript_id "g13.t1"; gene_id "g13"; NW_003724208.1 AUGUSTUS start_codon 70509 70511 . + 0 transcript_id "g13.t1"; gene_id "g13"; NW_003724208.1 AUGUSTUS initial 70509 70809 0.96 + 0 transcript_id "g13.t1"; gene_id "g13"; NW_003724208.1 AUGUSTUS internal 71139 71418 1 + 2 transcript_id "g13.t1"; gene_id "g13"; NW_003724208.1 AUGUSTUS terminal 71632 71770 0.87 + 1 transcript_id "g13.t1"; gene_id "g13"; NW_003724208.1 AUGUSTUS intron 70810 71138 0.96 + . transcript_id "g13.t1"; gene_id "g13"; NW_003724208.1 AUGUSTUS intron 71419 71631 1 + . transcript_id "g13.t1"; gene_id "g13"; NW_003724208.1 AUGUSTUS CDS 70509 70809 0.96 + 0 transcript_id "g13.t1"; gene_id "g13"; NW_003724208.1 AUGUSTUS CDS 71139 71418 1 + 2 transcript_id "g13.t1"; gene_id "g13"; NW_003724208.1 AUGUSTUS exon 71139 71418 . + . transcript_id "g13.t1"; gene_id "g13"; NW_003724208.1 AUGUSTUS CDS 71632 71770 0.87 + 1 transcript_id "g13.t1"; gene_id "g13"; NW_003724208.1 AUGUSTUS exon 71632 71946 . + . transcript_id "g13.t1"; gene_id "g13"; NW_003724208.1 AUGUSTUS stop_codon 71768 71770 . + 0 transcript_id "g13.t1"; gene_id "g13"; NW_003724208.1 AUGUSTUS tts 71946 71946 . + . transcript_id "g13.t1"; gene_id "g13"; # coding sequence = [atgaaagcagggaaatcctggaggtttggtggttcaaactccaggagccatgtgagaaggtcgcgggcgagccagacac # atgcctcgcgcgcaccatgggcaagtcagatgtgcaccgcgggcgagccagacgcgcaccgcaggcgatccagacgcgcatcgcaggcgagccagacg # cgcaccgcacgcgcaccacgggtgagccaaacaggcaccgtgggcaagccagacacacaccgtgggcgagccagacatgcaccgcatgcgcaccagat # ggggatcgcgtgcacacctgacttaggcacgagggcgcttaagccttgtgcggtgagccagctgatgaaaccatgggtgcaatgccatggtctgatgg # ctccaatagatgactcgcaccaagttgcctacgcacaatacaggggcgccatgtcctgtgcaccaagaaggattggccataggtgcaatgccatggct # cgttgttgggaagctgggaagcaagcaacaagcccaagccatgggcacctagacatggcacgggctcacacatcagtgtggggaaggcacactgatgc # accagatgcttgttggctgaggaatgatggctggtgcaagtgggtggcaggagcagaccactatctgggtggtgggtggttttgcaaggcagttgagg # gcggttcaggccagttgcataaaccacctagttggctccaagatttgaattag] # protein sequence = [MKAGKSWRFGGSNSRSHVRRSRASQTHASRAPWASQMCTAGEPDAHRRRSRRASQASQTRTARAPRVSQTGTVGKPDT # HRGRARHAPHAHQMGIACTPDLGTRALKPCAVSQLMKPWVQCHGLMAPIDDSHQVAYAQYRGAMSCAPRRIGHRCNAMARCWEAGKQATSPSHGHLDM # ARAHTSVWGRHTDAPDACWLRNDGWCKWVAGADHYLGGGWFCKAVEGGSGQLHKPPSWLQDLN] # end gene g13 ### # start gene g14 NW_003724208.1 AUGUSTUS gene 73141 73711 0.18 - . g14 NW_003724208.1 AUGUSTUS transcript 73141 73711 0.18 - . g14.t1 NW_003724208.1 AUGUSTUS tts 73141 73141 . - . transcript_id "g14.t1"; gene_id "g14"; NW_003724208.1 AUGUSTUS exon 73141 73711 . - . transcript_id "g14.t1"; gene_id "g14"; NW_003724208.1 AUGUSTUS stop_codon 73206 73208 . - 0 transcript_id "g14.t1"; gene_id "g14"; NW_003724208.1 AUGUSTUS single 73206 73646 0.96 - 0 transcript_id "g14.t1"; gene_id "g14"; NW_003724208.1 AUGUSTUS CDS 73206 73646 0.96 - 0 transcript_id "g14.t1"; gene_id "g14"; NW_003724208.1 AUGUSTUS start_codon 73644 73646 . - 0 transcript_id "g14.t1"; gene_id "g14"; NW_003724208.1 AUGUSTUS tss 73711 73711 . - . transcript_id "g14.t1"; gene_id "g14"; # coding sequence = [atggctcaggtgcaaccctgccgcaacatggctcccctgaaactcgacggagcaaatactcagatagatctaggcggaa # acataaccacagtgcaaagccaaaaatggattccgaaccacaacgtaattcaactgcaaatcttgggagcgtactccgtgatggagcacaacgtgaga # acgcgctccagcctggagttcgttaacacgtatgaaggatggtatcagcgcctcctcggaaaactcggcatccttcacaaaatccatcttgtagccac # agacaacggcgtcccgggcacctacgaggcatgggtttgggagaagtacgattgtcctctggattggaagaagatgaatcttccttcggatttgaccc # agatgaagcttcctctggtgctcttgtacttcattcctctgagcccggaaatagagccgcgcgcttaa] # protein sequence = [MAQVQPCRNMAPLKLDGANTQIDLGGNITTVQSQKWIPNHNVIQLQILGAYSVMEHNVRTRSSLEFVNTYEGWYQRLL # GKLGILHKIHLVATDNGVPGTYEAWVWEKYDCPLDWKKMNLPSDLTQMKLPLVLLYFIPLSPEIEPRA] # end gene g14 ### # start gene g15 NW_003724208.1 AUGUSTUS gene 80447 81791 0.17 - . g15 NW_003724208.1 AUGUSTUS transcript 80447 81791 0.17 - . g15.t1 NW_003724208.1 AUGUSTUS tts 80447 80447 . - . transcript_id "g15.t1"; gene_id "g15"; NW_003724208.1 AUGUSTUS exon 80447 80824 . - . transcript_id "g15.t1"; gene_id "g15"; NW_003724208.1 AUGUSTUS stop_codon 80547 80549 . - 0 transcript_id "g15.t1"; gene_id "g15"; NW_003724208.1 AUGUSTUS terminal 80547 80824 0.77 - 2 transcript_id "g15.t1"; gene_id "g15"; NW_003724208.1 AUGUSTUS initial 81318 81723 0.75 - 0 transcript_id "g15.t1"; gene_id "g15"; NW_003724208.1 AUGUSTUS intron 80825 81317 0.77 - . transcript_id "g15.t1"; gene_id "g15"; NW_003724208.1 AUGUSTUS CDS 80547 80824 0.77 - 2 transcript_id "g15.t1"; gene_id "g15"; NW_003724208.1 AUGUSTUS CDS 81318 81723 0.75 - 0 transcript_id "g15.t1"; gene_id "g15"; NW_003724208.1 AUGUSTUS exon 81318 81791 . - . transcript_id "g15.t1"; gene_id "g15"; NW_003724208.1 AUGUSTUS start_codon 81721 81723 . - 0 transcript_id "g15.t1"; gene_id "g15"; NW_003724208.1 AUGUSTUS tss 81791 81791 . - . transcript_id "g15.t1"; gene_id "g15"; # coding sequence = [atggctcaggtgcaaccctaccgcaacatggctcccctgaaactcgacggagcaaatactcagatagatctaggcggaa # aaataactacactggaaagcaaacgatggactccgaaccacaacgtaggtcagctgcaattcttgggaacgttctccgtgatggagcacaacaggagg # acgggctcctgcctgaaattcgttaacacgtatgaagggtggtatcagcgcctccccgaagaccaaggcatccttcacaaactccatcttgtagccac # agacaaaggcgtcccgggcaactacgaagcatgtgtctgggagaagaattgtcctctggattggaagaagatgaatcttcctctggacgaggaccaga # tgaatcttcatctggagctcgtgtacttcattccgcctccccgaagaccaaggcatccttcacaaactccatcttgtagccacagacaaaggcgtccc # gggcaactacgaagcatgtgtctgggagaagaattgtcctctggattggaagaagatgaatcttcctctggacgaggaccagatgaatcttcatctgg # agctcgtgtacttcattcgtctgtgcctagggatggcaatggggcgggtcatttcgggtacccgccccgccccgcccctaatggggtgggatattatt # tttctaaacgggtatag] # protein sequence = [MAQVQPYRNMAPLKLDGANTQIDLGGKITTLESKRWTPNHNVGQLQFLGTFSVMEHNRRTGSCLKFVNTYEGWYQRLP # EDQGILHKLHLVATDKGVPGNYEACVWEKNCPLDWKKMNLPLDEDQMNLHLELVYFIPPPRRPRHPSQTPSCSHRQRRPGQLRSMCLGEELSSGLEED # ESSSGRGPDESSSGARVLHSSVPRDGNGAGHFGYPPRPAPNGVGYYFSKRV] # end gene g15 ### # start gene g16 NW_003724208.1 AUGUSTUS gene 89746 91569 0.33 + . g16 NW_003724208.1 AUGUSTUS transcript 89746 91569 0.33 + . g16.t1 NW_003724208.1 AUGUSTUS tss 89746 89746 . + . transcript_id "g16.t1"; gene_id "g16"; NW_003724208.1 AUGUSTUS exon 89746 89861 . + . transcript_id "g16.t1"; gene_id "g16"; NW_003724208.1 AUGUSTUS start_codon 89856 89858 . + 0 transcript_id "g16.t1"; gene_id "g16"; NW_003724208.1 AUGUSTUS initial 89856 89861 0.98 + 0 transcript_id "g16.t1"; gene_id "g16"; NW_003724208.1 AUGUSTUS internal 89947 90028 0.95 + 0 transcript_id "g16.t1"; gene_id "g16"; NW_003724208.1 AUGUSTUS terminal 91241 91506 0.89 + 2 transcript_id "g16.t1"; gene_id "g16"; NW_003724208.1 AUGUSTUS intron 89862 89946 0.97 + . transcript_id "g16.t1"; gene_id "g16"; NW_003724208.1 AUGUSTUS intron 90029 91240 0.88 + . transcript_id "g16.t1"; gene_id "g16"; NW_003724208.1 AUGUSTUS CDS 89856 89861 0.98 + 0 transcript_id "g16.t1"; gene_id "g16"; NW_003724208.1 AUGUSTUS CDS 89947 90028 0.95 + 0 transcript_id "g16.t1"; gene_id "g16"; NW_003724208.1 AUGUSTUS exon 89947 90028 . + . transcript_id "g16.t1"; gene_id "g16"; NW_003724208.1 AUGUSTUS CDS 91241 91506 0.89 + 2 transcript_id "g16.t1"; gene_id "g16"; NW_003724208.1 AUGUSTUS exon 91241 91569 . + . transcript_id "g16.t1"; gene_id "g16"; NW_003724208.1 AUGUSTUS stop_codon 91504 91506 . + 0 transcript_id "g16.t1"; gene_id "g16"; NW_003724208.1 AUGUSTUS tts 91569 91569 . + . transcript_id "g16.t1"; gene_id "g16"; # coding sequence = [atgaagcaaaaggtggtgatcagtgtctccttcaatggcaacaagaattgtcagtccaaagccttgaagattgcagctg # gtttttcaggtgttaactctacagcattagaaggtgaggacaagaatcaaattgttgttgtaggtgagaacatcgatgtgattgagctcgtaaagaag # ttgaagaagaaggttggattctctacactcaatagtgtgactctggtggatggagaagaaaaagaggaggacgaagaagagaagcctattgagtggcc # acaccatcaagtgggcataccacattattacctctatgatgttcctttaaatcgctcaaacgactgtagtatcctctaa] # protein sequence = [MKQKVVISVSFNGNKNCQSKALKIAAGFSGVNSTALEGEDKNQIVVVGENIDVIELVKKLKKKVGFSTLNSVTLVDGE # EKEEDEEEKPIEWPHHQVGIPHYYLYDVPLNRSNDCSIL] # end gene g16 ### # start gene g17 NW_003724208.1 AUGUSTUS gene 92759 93311 0.67 - . g17 NW_003724208.1 AUGUSTUS transcript 92759 93311 0.67 - . g17.t1 NW_003724208.1 AUGUSTUS tts 92759 92759 . - . transcript_id "g17.t1"; gene_id "g17"; NW_003724208.1 AUGUSTUS exon 92759 93311 . - . transcript_id "g17.t1"; gene_id "g17"; NW_003724208.1 AUGUSTUS stop_codon 92943 92945 . - 0 transcript_id "g17.t1"; gene_id "g17"; NW_003724208.1 AUGUSTUS single 92943 93281 0.98 - 0 transcript_id "g17.t1"; gene_id "g17"; NW_003724208.1 AUGUSTUS CDS 92943 93281 0.98 - 0 transcript_id "g17.t1"; gene_id "g17"; NW_003724208.1 AUGUSTUS start_codon 93279 93281 . - 0 transcript_id "g17.t1"; gene_id "g17"; NW_003724208.1 AUGUSTUS tss 93311 93311 . - . transcript_id "g17.t1"; gene_id "g17"; # coding sequence = [atggcgcgggggcaataccgtctttctctcctcctggcttcgctcctcctcgtcgcagtagcctccgatgctcttctcg # gcggctggagcccgatcgaggacgtgaagaaccctcacgtgcaagagatcgggaagttcgcggtggaggcgcacaacaagttgaccgcgacgaagctg # aagttccagagcgtgataaagggccagactcaggtcgtcgccggcaccaactaccggctaacggtgatggccaagaacggcgccgcatcgaagaagta # cgaggcggttgtttgggagaagctggatggcaccaagcagctcacttcctttcaacccgtctga] # protein sequence = [MARGQYRLSLLLASLLLVAVASDALLGGWSPIEDVKNPHVQEIGKFAVEAHNKLTATKLKFQSVIKGQTQVVAGTNYR # LTVMAKNGAASKKYEAVVWEKLDGTKQLTSFQPV] # end gene g17 ### # start gene g18 NW_003724208.1 AUGUSTUS gene 93462 94131 0.08 - . g18 NW_003724208.1 AUGUSTUS transcript 93462 94131 0.08 - . g18.t1 NW_003724208.1 AUGUSTUS tts 93462 93462 . - . transcript_id "g18.t1"; gene_id "g18"; NW_003724208.1 AUGUSTUS exon 93462 94131 . - . transcript_id "g18.t1"; gene_id "g18"; NW_003724208.1 AUGUSTUS stop_codon 93730 93732 . - 0 transcript_id "g18.t1"; gene_id "g18"; NW_003724208.1 AUGUSTUS single 93730 94092 0.92 - 0 transcript_id "g18.t1"; gene_id "g18"; NW_003724208.1 AUGUSTUS CDS 93730 94092 0.92 - 0 transcript_id "g18.t1"; gene_id "g18"; NW_003724208.1 AUGUSTUS start_codon 94090 94092 . - 0 transcript_id "g18.t1"; gene_id "g18"; NW_003724208.1 AUGUSTUS tss 94131 94131 . - . transcript_id "g18.t1"; gene_id "g18"; # coding sequence = [atggaacttcaaagtcagttcttgtgccggctcttctgtgtcttcgtcttcatcattttaagtgcaaatgcagcagccc # cagtgacagcgggtggatggaatgagattccggacgtgatcaacaacactcacgttcaagatttaggcatgtttgcagtgctggcatacaacaactcc # accgcctccagcctgtttttctatgcggtgtttcaggctcaagcgcagattgccgaaggcctgaatgttaggatggtgattcaagcacttgaaagtga # gctgccaaagatgtataaagcttatgtgtgggagaaaccatgggagaacttcaagaaccttaccttctttgagcctgttctggtctaa] # protein sequence = [MELQSQFLCRLFCVFVFIILSANAAAPVTAGGWNEIPDVINNTHVQDLGMFAVLAYNNSTASSLFFYAVFQAQAQIAE # GLNVRMVIQALESELPKMYKAYVWEKPWENFKNLTFFEPVLV] # end gene g18 ### # start gene g19 NW_003724208.1 AUGUSTUS gene 94832 97731 0.6 - . g19 NW_003724208.1 AUGUSTUS transcript 94832 97731 0.6 - . g19.t1 NW_003724208.1 AUGUSTUS tts 94832 94832 . - . transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS exon 94832 95155 . - . transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS stop_codon 95121 95123 . - 0 transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS terminal 95121 95155 0.91 - 2 transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS internal 95233 95743 1 - 0 transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS internal 95834 95929 0.99 - 0 transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS internal 96293 96336 1 - 2 transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS internal 96443 96920 0.89 - 0 transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS initial 97256 97687 1 - 0 transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS intron 95156 95232 0.94 - . transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS intron 95744 95833 0.99 - . transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS intron 95930 96292 1 - . transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS intron 96337 96442 0.99 - . transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS intron 96921 97255 0.99 - . transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS CDS 95121 95155 0.91 - 2 transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS CDS 95233 95743 1 - 0 transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS exon 95233 95743 . - . transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS CDS 95834 95929 0.99 - 0 transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS exon 95834 95929 . - . transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS CDS 96293 96336 1 - 2 transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS exon 96293 96336 . - . transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS CDS 96443 96920 0.89 - 0 transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS exon 96443 96920 . - . transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS CDS 97256 97687 1 - 0 transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS exon 97256 97731 . - . transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS start_codon 97685 97687 . - 0 transcript_id "g19.t1"; gene_id "g19"; NW_003724208.1 AUGUSTUS tss 97731 97731 . - . transcript_id "g19.t1"; gene_id "g19"; # coding sequence = [atgaatagtgagcataacacgaatggggtttctgatgacctcaaagctccactgcttccagtccaggcgaccacaatgg # agacctcaaatggggcgtctctcatgtccattttcacacccaagagcttcttcatcctcttggggcctctgctctgcaccctcatctgcctttttgtg # aagcttgatggccctgtgaccagcaggaacatgttggctgttcttgcttggatgtttgcttggtggatcactgaagctgtgcctatgcccatcacctc # catgtctcctctcttcctctttcccctctttggaatcgcttccgcagatgatgttgctcactcctacatggatgatgtgatttcccttgttcttggaa # gcttcatacttgctcttgctgttgagcattacaacatccatagaagattggccctcaatattaccttgatcttttgtggagatccactgaatccccca # ttgcttctccttggcatctgtgccaccacagcctttgtgagtatgtggatgcacaatgttgcagcagcactgatgatgatgcccgtagccactggtat # cttacagaggctaccatcaggtccaactcgatctccccatgtggataaattctgcagagcagtggtgcttggggtgttatactctgctgcagttgggg # gaatgagcactctcaccggtactggcgtcaatctcatattggtaggaatgtggaagagctacttcccagaggcagaccccatcagctttaatacatgg # ttcttctttggcttccctttggctttgctggttttctttgccttgtgggctattctctgctgcttgtactgctccaggggtgcaggtcctgctctgtc # tgcttatttggacaaatccagtctcagaagagagcttcaaatgttgggtccaatggcttttgctgaaaagatggtgttggctgtgttttcgatgctaa # tagtcttatggatgacaaggagcataacagatgatgttcctggatggggagctctcttcaatggtcgtgtaggcgatgggactgccagtgtgatgatg # gcaaccttattgttcataattccaaacaagaaacaaaagggggagaagctgatggactggaacaaatgcaagaagctgccatggaacatcgtattgct # actaggcgctggctttgccatagctgccggagtccggtcaagtggcctggctgatgtgttgtcaaaggccttgactttcctggaacacgctccctact # tggtcattgcgcctgccgtctgtctcataagtagtacggttactgagttcacctcaaacaattccacaacaacactccttgttccccttctcatccaa # gtagcccaaaccatgcacgtccacccgctccttctcatggttcctggagccattggagcacagttttcttacttgctgcccactggaactccttcgaa # tgtcgtcgggttcacaacaggacacattgaaatcaaagatatgatcaagacaggagtgcctcttaagattgctggaattgctgcattatcccttctaa # tgccttcactcggagcatatgtttttgggacaaacgaagaaatgtga] # protein sequence = [MNSEHNTNGVSDDLKAPLLPVQATTMETSNGASLMSIFTPKSFFILLGPLLCTLICLFVKLDGPVTSRNMLAVLAWMF # AWWITEAVPMPITSMSPLFLFPLFGIASADDVAHSYMDDVISLVLGSFILALAVEHYNIHRRLALNITLIFCGDPLNPPLLLLGICATTAFVSMWMHN # VAAALMMMPVATGILQRLPSGPTRSPHVDKFCRAVVLGVLYSAAVGGMSTLTGTGVNLILVGMWKSYFPEADPISFNTWFFFGFPLALLVFFALWAIL # CCLYCSRGAGPALSAYLDKSSLRRELQMLGPMAFAEKMVLAVFSMLIVLWMTRSITDDVPGWGALFNGRVGDGTASVMMATLLFIIPNKKQKGEKLMD # WNKCKKLPWNIVLLLGAGFAIAAGVRSSGLADVLSKALTFLEHAPYLVIAPAVCLISSTVTEFTSNNSTTTLLVPLLIQVAQTMHVHPLLLMVPGAIG # AQFSYLLPTGTPSNVVGFTTGHIEIKDMIKTGVPLKIAGIAALSLLMPSLGAYVFGTNEEM] # end gene g19 ### # start gene g20 NW_003724208.1 AUGUSTUS gene 107686 110420 0.06 + . g20 NW_003724208.1 AUGUSTUS transcript 107686 110420 0.06 + . g20.t1 NW_003724208.1 AUGUSTUS tss 107686 107686 . + . transcript_id "g20.t1"; gene_id "g20"; NW_003724208.1 AUGUSTUS exon 107686 110420 . + . transcript_id "g20.t1"; gene_id "g20"; NW_003724208.1 AUGUSTUS start_codon 108118 108120 . + 0 transcript_id "g20.t1"; gene_id "g20"; NW_003724208.1 AUGUSTUS single 108118 109968 0.95 + 0 transcript_id "g20.t1"; gene_id "g20"; NW_003724208.1 AUGUSTUS CDS 108118 109968 0.95 + 0 transcript_id "g20.t1"; gene_id "g20"; NW_003724208.1 AUGUSTUS stop_codon 109966 109968 . + 0 transcript_id "g20.t1"; gene_id "g20"; NW_003724208.1 AUGUSTUS tts 110420 110420 . + . transcript_id "g20.t1"; gene_id "g20"; # coding sequence = [atgtctctcgtagaaacctcctccatcgactgcgtccaccaacgcctcgatcgtctttcctcgaagcgaaaattggacg # attattcctcccccgccgatgacgatttctctgatttagtctccttcagaatgagaaaattcgatcaaaacgccttcgtttcttgcaactctccgccg # gactctcatctcgagaggcatagggttgtcgatgcccgatcgtgtcccagttcgtgcagcgccgagtcggctcggcctgattcgcggttgcagttctt # cgtgaggatgatctccgaggggaatactctggtgattcacgcgaattcggatgataccgtggagtcgctgcaccaccggattcagtcgattacgggga # ttccggtgatggagcagcggctgatatacagagggaagcagctgcagtgggagcagtctttggctgaatgttcgattcaaaacgacgccgggcttcaa # cttgtcggtcggatgcggagtacggaacatccggcggcatggcgagtcgctagcgagatggtgtcaacgatttgtcggctttgtaggggggaaacatt # ccggccgttgaagaacatcaaatcgcagttgttggagttcttgatgctcactccaaaagacgacaccgagtcagcggccggttatcttcaggttttca # tgtcttcgtcggccccttcagctttggtcatgctctacatgtccccgactaagagtaacaaggagactgcagatgatactattaggcaatttcttaac # tcgagtcggaatttattaccaaagtctgtacaaatacaatgtgttcctatagtgttagaattttgtaagttgcttagtagaactgatcatgaggatcc # gttgtatttgacatgccgaagcactcttgggtcgctggtggaaaatgttggggtagtgagagcttcgaggtattgtcataatagtaagacattgattg # tagttaaagagattttaccatttgttagtgagctggctagtagcttgtcaaagtcattgatatcaagcatggaatcagcagggagcacagggaactca # ctaaatgatgggcgcaatttgattgcagggcatacattagcaaatgatgtgcgtgattttactgcattcttgcacccggtgcgatctgtgattatgga # gcaagtgagttttcatggtcctatttcaattccacttggagaacgtggtagtactaatccctggtatggagaagagattgagtttcttcatggcattt # tcatcgatttgatgacaaaaatggatgggtgtctccataaaatggagcaatgcttggcaggggaaggtggagttgatcatcatactgtatggccccag # tatcttgccgttctgaaggaattgaatagcatttctaaattatatcatggtgctgaggaagagttttggacatttatgagacgtaggaagattgcagt # gtgctctctaatgattagatatgcaaagagaagtgatgaccatagttggcttcttgagcacaaggatgtgactgattttgaatcaaggaggcatttgg # caatgatgatgttccctgaagtaaaggaagactatgaagaactacatgaaatgctcattgacaggtcacaattattggcagagtcattcgagtacatt # gcacgggcagagcgtgaatctctacatggtggtctgttcatggaattcaaaaatgaggaagctacaggacctggtgtgttgagagagtggttcttctt # ggtatgccaagaaattttcaatccacaaaatgccctttttgtagcatgcccaaatgatcgcagaaggttctttcctaatcctggtaagcttcctccat # ctctctag] # protein sequence = [MSLVETSSIDCVHQRLDRLSSKRKLDDYSSPADDDFSDLVSFRMRKFDQNAFVSCNSPPDSHLERHRVVDARSCPSSC # SAESARPDSRLQFFVRMISEGNTLVIHANSDDTVESLHHRIQSITGIPVMEQRLIYRGKQLQWEQSLAECSIQNDAGLQLVGRMRSTEHPAAWRVASE # MVSTICRLCRGETFRPLKNIKSQLLEFLMLTPKDDTESAAGYLQVFMSSSAPSALVMLYMSPTKSNKETADDTIRQFLNSSRNLLPKSVQIQCVPIVL # EFCKLLSRTDHEDPLYLTCRSTLGSLVENVGVVRASRYCHNSKTLIVVKEILPFVSELASSLSKSLISSMESAGSTGNSLNDGRNLIAGHTLANDVRD # FTAFLHPVRSVIMEQVSFHGPISIPLGERGSTNPWYGEEIEFLHGIFIDLMTKMDGCLHKMEQCLAGEGGVDHHTVWPQYLAVLKELNSISKLYHGAE # EEFWTFMRRRKIAVCSLMIRYAKRSDDHSWLLEHKDVTDFESRRHLAMMMFPEVKEDYEELHEMLIDRSQLLAESFEYIARAERESLHGGLFMEFKNE # EATGPGVLREWFFLVCQEIFNPQNALFVACPNDRRRFFPNPGKLPPSL] # end gene g20 ### # start gene g21 NW_003724208.1 AUGUSTUS gene 114986 122318 0.01 + . g21 NW_003724208.1 AUGUSTUS transcript 114986 122318 0.01 + . g21.t1 NW_003724208.1 AUGUSTUS tss 114986 114986 . + . transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS exon 114986 115050 . + . transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS exon 115120 115196 . + . transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS exon 116155 117125 . + . transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS start_codon 116213 116215 . + 0 transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS initial 116213 117125 0.98 + 0 transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS internal 117211 117731 0.72 + 2 transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS internal 117804 118529 0.53 + 0 transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS internal 118676 119384 0.17 + 0 transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS internal 119481 119584 0.53 + 2 transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS terminal 119708 122092 0.13 + 0 transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS intron 117126 117210 0.88 + . transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS intron 117732 117803 0.74 + . transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS intron 118530 118675 0.53 + . transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS intron 119385 119480 0.26 + . transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS intron 119585 119707 0.16 + . transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS CDS 116213 117125 0.98 + 0 transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS CDS 117211 117731 0.72 + 2 transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS exon 117211 117731 . + . transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS CDS 117804 118529 0.53 + 0 transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS exon 117804 118529 . + . transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS CDS 118676 119384 0.17 + 0 transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS exon 118676 119384 . + . transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS CDS 119481 119584 0.53 + 2 transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS exon 119481 119584 . + . transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS CDS 119708 122092 0.13 + 0 transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS exon 119708 122318 . + . transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS stop_codon 122090 122092 . + 0 transcript_id "g21.t1"; gene_id "g21"; NW_003724208.1 AUGUSTUS tts 122318 122318 . + . transcript_id "g21.t1"; gene_id "g21"; # coding sequence = [atgagagagagagcgagagagggcgaaagagagggcgacgacgagtgcgatggtgaggaggaggaggagaaatcggcgt # cgcaaatcagaaggaaggagagcaggtttacaatgaaatccaaggcgttcgagattgtagtggaggaaagaaaaggaaagatccaaggacgcattgtg # gagaagaagggaggggcctcgtcatgggtacgactgggatcggatagcttagcgtttttcttggaagggttgaatctctgtatcaagggtgagaaaga # aactagatggggaagggaatggaaggagcaggggagagtgtattctatgactcgagggacaaacagagcgggggggtttatacggcaaggggtctccg # atatagaggggaagaggttctgcatcttcgtcccgagaggtcgtagggataagagggggtggacgaccatggcgaagaagcttaaccaggtgttaggg # ttttttggtaaaaacccagaaaaccagaagggaaaggctgtggagaaggttgctatgggaagatcgtatgcaacaatggtgggaaaatcactgtcggg # taactcaaatgtcgttgcagtgaaggtgaaaaaggaggaatcagaaggattaatacagaaattgaaacattgtgtagtggcgagctggagagatgggt # cagggggagaagatgatatggagaaattggggcaagtttgggcaaagtcttgggacctcaaaggtaacctagggctggctaagctaaacaagagaaaa # gcgctgctggattttgagaatttggaagaggctagacgagtcgtttcctctgggagctgcgtgttggaaggaacccaggtaaggctggaacactggag # ccctaggagtggatgttgggcagaggggggaagagagaaaggaagcctggtcgatgaacatacgaaatcgatgggagatcttcaatgggccagaatct # tagtgaaattgagaggggaagctagaccgagcgtgctggaaattgaaggggaggaagagagttacgcaatgtccttatggtgggaatgttggccggtg # gtgaggaggaagtgcaggaacgaagccgatcgccatagcagggaggttaggggagaggaggtttcacgcgcggggcagcgagtgaggaaggattgggt # gagtgggaggctcgagtcgctgcaaccgtcagacgaagtgacggatgtgcagggggttgggtcgggtcgggttgagatcagtccagatctaagcccga # caacccggacgtgggtttcatttggtgaaataaatcctttaagcccaatcacgggcccaaagggaacaaggagggatggtgggcctggcttaatgatc # gggtccatggatttgaagaaaaaaggagtggctgcaagtgtttttgtcccagacgcaggtccatcgtgcggcagggaggatgcctgcacccaacagcc # cgatcaaggcggaaaaataagggagggcccaaaatcaccaacagtccaagaggtgacgggtttgctgctgaagtattctgcacccaactaccctccag # aagcagagacttttgttgcgagggagactgaggacacaaggaagctacaaggagtggttaggctgacagagatggatagggcgcttgaagaggaatca # atgaggtatggaatggggtccggttcctgggggaaaagggcattgggggattctcatctcaattcttttctttttgatcggactctggggggggagtt # tttcgatcgttctagggatttggatgaggaaggtcgggccgataattcaatgtggttaacagtgtatgaggcttgcaatgaaaggattaaggaatgta # aggaactgggagtcatcaaatgtagcagtgacaaaggtagggagatggaaggggtaggcgacatagatgatgctcaagttgagagaagtaagccggag # ggtaaatgggaagagagtggtttggcgaggttcagccagttcctgggctttcctacggagggactggagaaggaaatactaactttcttgaccaagat # caggaaaagacgggagaaaattcatagcaaagagttactggaaaagtctaagtttgaaagggagttaaaaagactggaatgctccataaactatgagg # gaggggtgaaacagaaaggctcggagacaaaattgcagtgtatgacggatagcattgcgagaagtataggctccgggagatttctaggctggaaagca # gtgaatgcggagggagcttcgggaggtatttttatatgctgggatagaaggttgctggacatgctagactgggaggagggacagtttactttgtcttg # cagattccgaaatgtagaaaatgagattgtctgggtatttacgggagtgtatggccctttctctaaggtagagagggatgctttatgggaagagtttg # gggcgattagagggctgtgggaggatccttggtgcatagggggggattttaatatcactttgttttcgagtgaaaggagtagtcagaggagaattagc # tcagcaatgaggaaatttgcggaaactgtgaatgatcttgggttggtggatcttcctcttcaggggggagattttacttggaatgggggcctaaataa # tcagacttgggcacgtttggacaggttccttgtgtctcctagttggatagatcaattcagtgggattaaccagtgcaggctgccccgtccggtatctg # atcatttcccaattatgttagtggggggtgggataagacgaggcccgaccccattcagatttgaaaatatgtggcttaaggctgagggttttaaagag # cttgttcgtagctggtggcaaggaattgatgttaggggcagtgctactctgcaacagctggaattctgggatagggaggaaaatgatagaattctgac # tatggaggaatcagagcttaagaaagaggcaaaagaaaactacagaaaatggagaattaagatcaatggggaatggtttctagaggagcaggaaatta # gagaaggaattgctaatgcgtttaaagagcttctttcagaagatacggagtggaaggcggatattgggagtcttcagtttgatcagatcagtcaagaa # gaggctgagatattggagaggccttttacagaggaagaaatccatggggctctgatggagatgaatggggataaagcccctggtccggatggttttac # tttggccttttggcaaagctgttgggagtttattaaagaggagattctagaaatgttcaaggaattctatgatcatagctctttcctcaagagcctta # acaatactttattggttttgatccccaagaaatatggggctgagaaccttggagactttagacctattagtctcttagggggtctttacaagttattg # gctaaagtgctggctaacagattgaagatagtggttggtaaggtggtctctacttctcagaatgcctttgtgaggggaagacaaattcttgacgcttc # tttaattgcaaatgaagtgatagactcatggcaaaaacgaaaagaaaagggacttatatgcaaactggatatagaaaaagcttatgacagtatcaatt # ggaagtttttgttgaaggtgttgcagaaaatgggttttgggtctaagtgggtgaggtggatgtggagttgtctatcttcagctaaattttcagtgatg # gttaatggagtgcctgcaggcttctttcctagctctaaaggtcttagacaaggagatcccctgtctccttatctctttgttatgggaatggaagtgct # agatgttcttattaggagagctgtggaggagggattcttatcagggtgtaacataaggggcggtagtgaacctcctttgaatatctctcacttgctct # ttgctggcgataccattatattctgcgaggccaggaaggatcatctaactcatttaagttggattttattctggtttgaagcggcgtcaggcctaagg # attaatctagccaagagtgaaatcattccagttggagaggtggtggagatggaggagttggctgttgagctaggttgtagggtggggtctttaccttc # tcagtacttgggcctacccttaggggttctcaatagagcgccctatatgtgggatggggtggaagagagagtcaggaggagactagctctttggaaaa # ggcaatatatctctaaagggggaagagtcactttaataaaaagtactttgtctagtatgccaatctaccaaatgtctatcttcaggatgcccaagatg # gttgctagaagacttgagaaagtgcaaagggattttttgtggggaaggggaaatatggaggggaaaactcacttggtaaattgggaggtggtatgtac # agataaggataaaggtgggctaggcattaggaagctagctatgttgaacaaagcattacttggcaagtggatatggaggtatgcttgtgacaaagata # atctttggaaacaagtgatcaaggtgaagtatggactggaggactttggttggaggccaaagaaggctaggggggcagtgggagtaggggtttggaag # gagatttggaaagaatcagagtggtgctggaataacatgatcttcaaagtagggaagggcaacacgatcagattttggacagatgtgtggtgttcaga # gagagcattgtcccattgttttcctcatctctttggcatggcggttcaaaggaactcaacggttgaggaaatgtgggatcaaagttcgggtcaaggaa # attggaatctaaattttttgagggacttcaatgattgggaattggagttggttggggattttcttcagatattgaggggtcacaaaccctcttgggaa # gaaaattcagtcctgtggagaaaaggaagaagcgggcaattcagggtcaaggaagtgtataatctgctggcgagggctgatgatacaggttttccttc # aagaagcatttgggtgacaagggtgccaactaaagtttgtttttttgcgtgggaggcgacgtgggggaggatcctgactttggatagacttcaaagaa # gaggactacaacttccaaatcgctgcttcctgtgtggttgtgaggaagaaagtgtaaatcatatccttatacactgtacagtggttagagctctatgg # gatatagtgtttggtttagtagacgtgaaatgggttttcccagaaactgtaaaggaggttttagttagttggaggggttcgtttgtgggaaagaaaag # gaaaaagacttgggatgctattccgttgtgtattttttggacggtgtggaaggagaggaatagattagcttttaggggggggtaa] # protein sequence = [MRERAREGEREGDDECDGEEEEEKSASQIRRKESRFTMKSKAFEIVVEERKGKIQGRIVEKKGGASSWVRLGSDSLAF # FLEGLNLCIKGEKETRWGREWKEQGRVYSMTRGTNRAGGFIRQGVSDIEGKRFCIFVPRGRRDKRGWTTMAKKLNQVLGFFGKNPENQKGKAVEKVAM # GRSYATMVGKSLSGNSNVVAVKVKKEESEGLIQKLKHCVVASWRDGSGGEDDMEKLGQVWAKSWDLKGNLGLAKLNKRKALLDFENLEEARRVVSSGS # CVLEGTQVRLEHWSPRSGCWAEGGREKGSLVDEHTKSMGDLQWARILVKLRGEARPSVLEIEGEEESYAMSLWWECWPVVRRKCRNEADRHSREVRGE # EVSRAGQRVRKDWVSGRLESLQPSDEVTDVQGVGSGRVEISPDLSPTTRTWVSFGEINPLSPITGPKGTRRDGGPGLMIGSMDLKKKGVAASVFVPDA # GPSCGREDACTQQPDQGGKIREGPKSPTVQEVTGLLLKYSAPNYPPEAETFVARETEDTRKLQGVVRLTEMDRALEEESMRYGMGSGSWGKRALGDSH # LNSFLFDRTLGGEFFDRSRDLDEEGRADNSMWLTVYEACNERIKECKELGVIKCSSDKGREMEGVGDIDDAQVERSKPEGKWEESGLARFSQFLGFPT # EGLEKEILTFLTKIRKRREKIHSKELLEKSKFERELKRLECSINYEGGVKQKGSETKLQCMTDSIARSIGSGRFLGWKAVNAEGASGGIFICWDRRLL # DMLDWEEGQFTLSCRFRNVENEIVWVFTGVYGPFSKVERDALWEEFGAIRGLWEDPWCIGGDFNITLFSSERSSQRRISSAMRKFAETVNDLGLVDLP # LQGGDFTWNGGLNNQTWARLDRFLVSPSWIDQFSGINQCRLPRPVSDHFPIMLVGGGIRRGPTPFRFENMWLKAEGFKELVRSWWQGIDVRGSATLQQ # LEFWDREENDRILTMEESELKKEAKENYRKWRIKINGEWFLEEQEIREGIANAFKELLSEDTEWKADIGSLQFDQISQEEAEILERPFTEEEIHGALM # EMNGDKAPGPDGFTLAFWQSCWEFIKEEILEMFKEFYDHSSFLKSLNNTLLVLIPKKYGAENLGDFRPISLLGGLYKLLAKVLANRLKIVVGKVVSTS # QNAFVRGRQILDASLIANEVIDSWQKRKEKGLICKLDIEKAYDSINWKFLLKVLQKMGFGSKWVRWMWSCLSSAKFSVMVNGVPAGFFPSSKGLRQGD # PLSPYLFVMGMEVLDVLIRRAVEEGFLSGCNIRGGSEPPLNISHLLFAGDTIIFCEARKDHLTHLSWILFWFEAASGLRINLAKSEIIPVGEVVEMEE # LAVELGCRVGSLPSQYLGLPLGVLNRAPYMWDGVEERVRRRLALWKRQYISKGGRVTLIKSTLSSMPIYQMSIFRMPKMVARRLEKVQRDFLWGRGNM # EGKTHLVNWEVVCTDKDKGGLGIRKLAMLNKALLGKWIWRYACDKDNLWKQVIKVKYGLEDFGWRPKKARGAVGVGVWKEIWKESEWCWNNMIFKVGK # GNTIRFWTDVWCSERALSHCFPHLFGMAVQRNSTVEEMWDQSSGQGNWNLNFLRDFNDWELELVGDFLQILRGHKPSWEENSVLWRKGRSGQFRVKEV # YNLLARADDTGFPSRSIWVTRVPTKVCFFAWEATWGRILTLDRLQRRGLQLPNRCFLCGCEEESVNHILIHCTVVRALWDIVFGLVDVKWVFPETVKE # VLVSWRGSFVGKKRKKTWDAIPLCIFWTVWKERNRLAFRGG] # end gene g21 ### # start gene g22 NW_003724208.1 AUGUSTUS gene 124426 129545 0.02 + . g22 NW_003724208.1 AUGUSTUS transcript 124426 129545 0.01 + . g22.t1 NW_003724208.1 AUGUSTUS tss 124426 124426 . + . transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS exon 124426 124635 . + . transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS start_codon 124557 124559 . + 0 transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS initial 124557 124635 0.48 + 0 transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS internal 124969 125055 0.72 + 2 transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS internal 125271 125344 0.54 + 2 transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS internal 125671 125893 0.69 + 0 transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS internal 125980 126060 0.4 + 2 transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS internal 126261 126850 0.88 + 2 transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS terminal 128465 128728 1 + 0 transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS intron 124636 124968 0.58 + . transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS intron 125056 125270 0.5 + . transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS intron 125345 125670 0.61 + . transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS intron 125894 125979 0.41 + . transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS intron 126061 126260 0.4 + . transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS intron 126851 128464 0.11 + . transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS CDS 124557 124635 0.48 + 0 transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS CDS 124969 125055 0.72 + 2 transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS exon 124969 125055 . + . transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS CDS 125271 125344 0.54 + 2 transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS exon 125271 125344 . + . transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS CDS 125671 125893 0.69 + 0 transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS exon 125671 125893 . + . transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS CDS 125980 126060 0.4 + 2 transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS exon 125980 126060 . + . transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS CDS 126261 126850 0.88 + 2 transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS exon 126261 126850 . + . transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS CDS 128465 128728 1 + 0 transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS exon 128465 129545 . + . transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS stop_codon 128726 128728 . + 0 transcript_id "g22.t1"; gene_id "g22"; NW_003724208.1 AUGUSTUS tts 129545 129545 . + . transcript_id "g22.t1"; gene_id "g22"; # coding sequence = [atgttggagggtcgcggcgtccagtcccagtccgcaccagccaccctcctcacagctactgtcgccgctgccgacggcg # acttagccaaaaccctagatcaaagttgtggactagcagaagatatggagattccagaaggcaaccatagccgagatagttctatagagtcattcact # gtggaaggaaatttactatgtaagggaatgacttatagcatgtacacttacattcttttcatggataaatttattgttgttggaagtccttccttcgt # cagtaaggggcactcttttggggtgtcatggttcctttgtaggaaggaaacgttagaaggtttggagagtggccccactttgcattttttggacaatt # tggaaggaagaaaccaaagagagttggacagtgaggagcagctggttcaagcattgaaacaatcactccgtagtaatcttttgtcttgggattgggtg # ggttcttggtgggggaggaagtggttgttttttggttgtccaatccctttatggttgtgccttagtatcatctcatctgaggtggatcccatgcacct # tcagtatttccgcttctctggtcgagtgattgcattagctttgatgcataaagtgcaagttggtgttgtctttgatcgagtatttttcttgcaattgg # ctggaatggatatttccttggaagatatacaggatgcagatccattattgtatactagctgcaagcaaattctggatatggatgcagaattcatggat # tcagatgctttgggactaacatttgttagagaaatcgaagaactaggatccagaagagttgtggagctttgccctggtgggaaaaacatcatcgtgaa # cagcaagaacagggacgaatatgtttatcttcttattcggcatcgctttgttacatctacctctgaacaggtagcacaatttgctggaggctttgctg # atattctttgtaaccaaaagctccagaagttctttttccagagtttagagcttgaagatcttgattggatgctatatggaagtgaaagtgctatttgt # gttgatgactggaaggcacatactgagtacaacggctacaaggaaactgatcctcagattttctggttctggaagattattggcgaaatgtcagcaga # gcagaggaagattctactcttcttttggacttcggttaagtatctacctgtagagggttttggtggtttggcttctcgtctatatatctacaagtcgt # cagagccctgtgttcgcctgccttcatctcacacatgcttttaccggttgagtttcccaccttatccatcaatggctatcatggaagatcggcttcgc # atcatcacccaagaacatgttggatgcagcttcggtacctggtga] # protein sequence = [MLEGRGVQSQSAPATLLTATVAAADGDLAKTLDQSCGLAEDMEIPEGNHSRDSSIESFTVEGNLLCKGMTYSMYTYIL # FMDKFIVVGSPSFVSKGHSFGVSWFLCRKETLEGLESGPTLHFLDNLEGRNQRELDSEEQLVQALKQSLRSNLLSWDWVGSWWGRKWLFFGCPIPLWL # CLSIISSEVDPMHLQYFRFSGRVIALALMHKVQVGVVFDRVFFLQLAGMDISLEDIQDADPLLYTSCKQILDMDAEFMDSDALGLTFVREIEELGSRR # VVELCPGGKNIIVNSKNRDEYVYLLIRHRFVTSTSEQVAQFAGGFADILCNQKLQKFFFQSLELEDLDWMLYGSESAICVDDWKAHTEYNGYKETDPQ # IFWFWKIIGEMSAEQRKILLFFWTSVKYLPVEGFGGLASRLYIYKSSEPCVRLPSSHTCFYRLSFPPYPSMAIMEDRLRIITQEHVGCSFGTW] NW_003724208.1 AUGUSTUS transcript 124426 129545 0.01 + . g22.t2 NW_003724208.1 AUGUSTUS tss 124426 124426 . + . transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS exon 124426 124635 . + . transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS start_codon 124557 124559 . + 0 transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS initial 124557 124635 0.48 + 0 transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS internal 124969 125055 0.72 + 2 transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS internal 125271 125344 0.54 + 2 transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS internal 125671 125893 0.69 + 0 transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS internal 126261 126850 0.88 + 2 transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS internal 127111 127169 0.57 + 0 transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS internal 128046 128100 0.16 + 1 transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS terminal 128465 128728 1 + 0 transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS intron 124636 124968 0.58 + . transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS intron 125056 125270 0.5 + . transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS intron 125345 125670 0.61 + . transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS intron 125894 126260 0.39 + . transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS intron 126851 127110 0.66 + . transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS intron 127170 128045 0.09 + . transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS intron 128101 128464 0.33 + . transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS CDS 124557 124635 0.48 + 0 transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS CDS 124969 125055 0.72 + 2 transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS exon 124969 125055 . + . transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS CDS 125271 125344 0.54 + 2 transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS exon 125271 125344 . + . transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS CDS 125671 125893 0.69 + 0 transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS exon 125671 125893 . + . transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS CDS 126261 126850 0.88 + 2 transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS exon 126261 126850 . + . transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS CDS 127111 127169 0.57 + 0 transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS exon 127111 127169 . + . transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS CDS 128046 128100 0.16 + 1 transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS exon 128046 128100 . + . transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS CDS 128465 128728 1 + 0 transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS exon 128465 129545 . + . transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS stop_codon 128726 128728 . + 0 transcript_id "g22.t2"; gene_id "g22"; NW_003724208.1 AUGUSTUS tts 129545 129545 . + . transcript_id "g22.t2"; gene_id "g22"; # coding sequence = [atgttggagggtcgcggcgtccagtcccagtccgcaccagccaccctcctcacagctactgtcgccgctgccgacggcg # acttagccaaaaccctagatcaaagttgtggactagcagaagatatggagattccagaaggcaaccatagccgagatagttctatagagtcattcact # gtggaaggaaatttactatgtaagggaatgacttatagcatgtacacttacattcttttcatggataaatttattgttgttggaagtccttccttcgt # cagtaaggggcactcttttggggtgtcatggttcctttgtaggaaggaaacgttagaaggtttggagagtggccccactttgcattttttggacaatt # tggaaggaagaaaccaaagagagttggacagtgaggagcagctggttcaagcattgaaacaatcactccgtagtaatcttttgtcttgggcatctgag # gtggatcccatgcaccttcagtatttccgcttctctggtcgagtgattgcattagctttgatgcataaagtgcaagttggtgttgtctttgatcgagt # atttttcttgcaattggctggaatggatatttccttggaagatatacaggatgcagatccattattgtatactagctgcaagcaaattctggatatgg # atgcagaattcatggattcagatgctttgggactaacatttgttagagaaatcgaagaactaggatccagaagagttgtggagctttgccctggtggg # aaaaacatcatcgtgaacagcaagaacagggacgaatatgtttatcttcttattcggcatcgctttgttacatctacctctgaacaggtagcacaatt # tgctggaggctttgctgatattctttgtaaccaaaagctccagaagttctttttccagagtttagagcttgaagatcttgattggatgctatatggaa # gtgaaagtgctatttgtgttgatgactggaaggcacatactgagtacaacggctacaaggaaactgatcctcagattttctggttctggaaggcaaac # ctttcttacagtatggcatcactttatttgttgggtggcagcaccattggtcgatggttgattggatcaagcagggcaactgagtcttttgtgctact # gtcatttgttattattggcgaaatgtcagcagagcagaggaagattctactcttcttttggacttcggttaagtatctacctgtagagggttttggtg # gtttggcttctcgtctatatatctacaagtcgtcagagccctgtgttcgcctgccttcatctcacacatgcttttaccggttgagtttcccaccttat # ccatcaatggctatcatggaagatcggcttcgcatcatcacccaagaacatgttggatgcagcttcggtacctggtga] # protein sequence = [MLEGRGVQSQSAPATLLTATVAAADGDLAKTLDQSCGLAEDMEIPEGNHSRDSSIESFTVEGNLLCKGMTYSMYTYIL # FMDKFIVVGSPSFVSKGHSFGVSWFLCRKETLEGLESGPTLHFLDNLEGRNQRELDSEEQLVQALKQSLRSNLLSWASEVDPMHLQYFRFSGRVIALA # LMHKVQVGVVFDRVFFLQLAGMDISLEDIQDADPLLYTSCKQILDMDAEFMDSDALGLTFVREIEELGSRRVVELCPGGKNIIVNSKNRDEYVYLLIR # HRFVTSTSEQVAQFAGGFADILCNQKLQKFFFQSLELEDLDWMLYGSESAICVDDWKAHTEYNGYKETDPQIFWFWKANLSYSMASLYLLGGSTIGRW # LIGSSRATESFVLLSFVIIGEMSAEQRKILLFFWTSVKYLPVEGFGGLASRLYIYKSSEPCVRLPSSHTCFYRLSFPPYPSMAIMEDRLRIITQEHVG # CSFGTW] # end gene g22 ### # start gene g23 NW_003724208.1 AUGUSTUS gene 130257 132101 0.03 - . g23 NW_003724208.1 AUGUSTUS transcript 130257 132101 0.03 - . g23.t1 NW_003724208.1 AUGUSTUS tts 130257 130257 . - . transcript_id "g23.t1"; gene_id "g23"; NW_003724208.1 AUGUSTUS exon 130257 131031 . - . transcript_id "g23.t1"; gene_id "g23"; NW_003724208.1 AUGUSTUS stop_codon 130693 130695 . - 0 transcript_id "g23.t1"; gene_id "g23"; NW_003724208.1 AUGUSTUS terminal 130693 131031 0.51 - 0 transcript_id "g23.t1"; gene_id "g23"; NW_003724208.1 AUGUSTUS internal 131449 131574 0.37 - 0 transcript_id "g23.t1"; gene_id "g23"; NW_003724208.1 AUGUSTUS initial 131785 131799 0.82 - 0 transcript_id "g23.t1"; gene_id "g23"; NW_003724208.1 AUGUSTUS intron 131032 131448 0.32 - . transcript_id "g23.t1"; gene_id "g23"; NW_003724208.1 AUGUSTUS intron 131575 131784 0.37 - . transcript_id "g23.t1"; gene_id "g23"; NW_003724208.1 AUGUSTUS CDS 130693 131031 0.51 - 0 transcript_id "g23.t1"; gene_id "g23"; NW_003724208.1 AUGUSTUS CDS 131449 131574 0.37 - 0 transcript_id "g23.t1"; gene_id "g23"; NW_003724208.1 AUGUSTUS exon 131449 131574 . - . transcript_id "g23.t1"; gene_id "g23"; NW_003724208.1 AUGUSTUS CDS 131785 131799 0.82 - 0 transcript_id "g23.t1"; gene_id "g23"; NW_003724208.1 AUGUSTUS exon 131785 132101 . - . transcript_id "g23.t1"; gene_id "g23"; NW_003724208.1 AUGUSTUS start_codon 131797 131799 . - 0 transcript_id "g23.t1"; gene_id "g23"; NW_003724208.1 AUGUSTUS tss 132101 132101 . - . transcript_id "g23.t1"; gene_id "g23"; # coding sequence = [atggccactgttgagaagcagaatccatcattttgtgatcacccagttttagaatatgcaaaactggagtgcatggcac # agtatgaatggatcaatattatgatcatcatggagcttgatcaaatattgatccagaaaaaaagccagttactgaagaaacaaaggaagagggcttcc # agtggaggaggcagcggcactgaagctgaagccaaagctgaagctcctgttgaagttgaagttgagacaaaggaggttgtagaggaagccgcggttga # ggaggcagaagcagagaaaaccgaaggagagactccagcagtggaggcagaagccgctgttgagaaggccaaagaagagactactgaggaggcagctg # cagccccagcagaggaagctgccgccaaggaagaagaagaagccaaaccagctgaagcagcagaggaagccagcacagaggttcctgtcgagaagatt # gaggaatag] # protein sequence = [MATVEKQNPSFCDHPVLEYAKLECMAQYEWINIMIIMELDQILIQKKSQLLKKQRKRASSGGGSGTEAEAKAEAPVEV # EVETKEVVEEAAVEEAEAEKTEGETPAVEAEAAVEKAKEETTEEAAAAPAEEAAAKEEEEAKPAEAAEEASTEVPVEKIEE] # end gene g23 ### # start gene g24 NW_003724208.1 AUGUSTUS gene 136086 137351 0.02 - . g24 NW_003724208.1 AUGUSTUS transcript 136086 137351 0.02 - . g24.t1 NW_003724208.1 AUGUSTUS tts 136086 136086 . - . transcript_id "g24.t1"; gene_id "g24"; NW_003724208.1 AUGUSTUS exon 136086 137137 . - . transcript_id "g24.t1"; gene_id "g24"; NW_003724208.1 AUGUSTUS stop_codon 136788 136790 . - 0 transcript_id "g24.t1"; gene_id "g24"; NW_003724208.1 AUGUSTUS terminal 136788 137137 0.38 - 2 transcript_id "g24.t1"; gene_id "g24"; NW_003724208.1 AUGUSTUS initial 137212 137290 0.6 - 0 transcript_id "g24.t1"; gene_id "g24"; NW_003724208.1 AUGUSTUS intron 137138 137211 0.39 - . transcript_id "g24.t1"; gene_id "g24"; NW_003724208.1 AUGUSTUS CDS 136788 137137 0.38 - 2 transcript_id "g24.t1"; gene_id "g24"; NW_003724208.1 AUGUSTUS CDS 137212 137290 0.6 - 0 transcript_id "g24.t1"; gene_id "g24"; NW_003724208.1 AUGUSTUS exon 137212 137351 . - . transcript_id "g24.t1"; gene_id "g24"; NW_003724208.1 AUGUSTUS start_codon 137288 137290 . - 0 transcript_id "g24.t1"; gene_id "g24"; NW_003724208.1 AUGUSTUS tss 137351 137351 . - . transcript_id "g24.t1"; gene_id "g24"; # coding sequence = [atgttcttacaagtctatattaagaatctaagatcaaggaagctgtcttctgcactgccttcttgcccttccatacaag # gtgcttcatgtcttgcacacctaggcatgacaatgaaagtcagatgtcttgaaggttatggttattctgcattcataagtgtctcaaatgccaaaaag # atggaatcatcctgtgttgcccatttgccagtggtggggcaagcaggcaatgatgagtcacttgagctaggcaatggttgccatttcggttattactt # ggcagatcaaggcttattctctctcatgcctcaaccaatggctaaaagggatgaaagcaagtttacatcaaagctaatgtttatgaaaggatgtttct # cttttagaagtgacaacaaaaaccccatcatgccatctgatattcttctagtataa] # protein sequence = [MFLQVYIKNLRSRKLSSALPSCPSIQGASCLAHLGMTMKVRCLEGYGYSAFISVSNAKKMESSCVAHLPVVGQAGNDE # SLELGNGCHFGYYLADQGLFSLMPQPMAKRDESKFTSKLMFMKGCFSFRSDNKNPIMPSDILLV] # end gene g24 ### # start gene g25 NW_003724208.1 AUGUSTUS gene 138766 139659 0.01 + . g25 NW_003724208.1 AUGUSTUS transcript 138766 139659 0.01 + . g25.t1 NW_003724208.1 AUGUSTUS tss 138766 138766 . + . transcript_id "g25.t1"; gene_id "g25"; NW_003724208.1 AUGUSTUS exon 138766 139232 . + . transcript_id "g25.t1"; gene_id "g25"; NW_003724208.1 AUGUSTUS start_codon 138816 138818 . + 0 transcript_id "g25.t1"; gene_id "g25"; NW_003724208.1 AUGUSTUS initial 138816 139232 0.59 + 0 transcript_id "g25.t1"; gene_id "g25"; NW_003724208.1 AUGUSTUS terminal 139386 139472 0.33 + 0 transcript_id "g25.t1"; gene_id "g25"; NW_003724208.1 AUGUSTUS intron 139233 139385 0.34 + . transcript_id "g25.t1"; gene_id "g25"; NW_003724208.1 AUGUSTUS CDS 138816 139232 0.59 + 0 transcript_id "g25.t1"; gene_id "g25"; NW_003724208.1 AUGUSTUS CDS 139386 139472 0.33 + 0 transcript_id "g25.t1"; gene_id "g25"; NW_003724208.1 AUGUSTUS exon 139386 139659 . + . transcript_id "g25.t1"; gene_id "g25"; NW_003724208.1 AUGUSTUS stop_codon 139470 139472 . + 0 transcript_id "g25.t1"; gene_id "g25"; NW_003724208.1 AUGUSTUS tts 139659 139659 . + . transcript_id "g25.t1"; gene_id "g25"; # coding sequence = [atgcagcattttccaatcttacccctttccttcacggtgggcaatgggagaaggattaaattttggaaagacaaatggt # gtggtgatgagcttttgtgtgtcttgttcccctccttatttgccctagctagctgtaaagaggcttgggtggcggacttgtggatgtactctaataag # aagggtgtttggattcctaatttctctagacctctcaatgactgggatattgagactgtggagtgctttttttcaaggcttcaagataaggcggtgga # tgtggaaggggaggacaagatgttttgggtggcaacaaagagtgaatccttctctattaagtccctctactctatccttgaggcaggaaaggtggagc # cttttccttcaagtgtagtgtggaatgcatgggttcctccaaagggtgttgtaggagctcttgttatctgttttaagggtgtcttgggtgatccattc # tacaataagagagacccttttagggtggcatga] # protein sequence = [MQHFPILPLSFTVGNGRRIKFWKDKWCGDELLCVLFPSLFALASCKEAWVADLWMYSNKKGVWIPNFSRPLNDWDIET # VECFFSRLQDKAVDVEGEDKMFWVATKSESFSIKSLYSILEAGKVEPFPSSVVWNAWVPPKGVVGALVICFKGVLGDPFYNKRDPFRVA] # end gene g25 ### # start gene g26 NW_003724208.1 AUGUSTUS gene 139852 143461 0.06 - . g26 NW_003724208.1 AUGUSTUS transcript 139852 143461 0.05 - . g26.t1 NW_003724208.1 AUGUSTUS tts 139852 139852 . - . transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS exon 139852 140253 . - . transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS stop_codon 140236 140238 . - 0 transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS terminal 140236 140253 0.68 - 0 transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS internal 140333 140391 0.75 - 2 transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS internal 140571 140632 0.88 - 1 transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS internal 140761 140860 0.58 - 2 transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS internal 141298 141346 0.91 - 0 transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS internal 141437 141556 0.93 - 0 transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS internal 142962 143055 0.89 - 1 transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS initial 143143 143294 0.99 - 0 transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS intron 140254 140332 0.69 - . transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS intron 140392 140570 0.79 - . transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS intron 140633 140760 0.59 - . transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS intron 140861 141297 0.91 - . transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS intron 141347 141436 0.93 - . transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS intron 141557 142961 0.27 - . transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS intron 143056 143142 0.99 - . transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS CDS 140236 140253 0.68 - 0 transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS CDS 140333 140391 0.75 - 2 transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS exon 140333 140391 . - . transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS CDS 140571 140632 0.88 - 1 transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS exon 140571 140632 . - . transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS CDS 140761 140860 0.58 - 2 transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS exon 140761 140860 . - . transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS CDS 141298 141346 0.91 - 0 transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS exon 141298 141346 . - . transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS CDS 141437 141556 0.93 - 0 transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS exon 141437 141556 . - . transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS CDS 142962 143055 0.89 - 1 transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS exon 142962 143055 . - . transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS CDS 143143 143294 0.99 - 0 transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS exon 143143 143461 . - . transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS start_codon 143292 143294 . - 0 transcript_id "g26.t1"; gene_id "g26"; NW_003724208.1 AUGUSTUS tss 143461 143461 . - . transcript_id "g26.t1"; gene_id "g26"; # coding sequence = [atggcggaagatctggtgttggacacggccatcagagattgggtgcttataccactgtcggtggtgatggttctcatcg # gggtgctccgctatttcgtctccaagctcatgcgatcctctcaagtgcccgattccaaaatcgttagagaagggcaggtgattgttagggctcgaaac # ttgcgggcggcggcgaattacattccggccaagtcgtttcgtgctaggaaagtttacttcaataacgaggaaaatggattactgcatgttcctaaggg # tcaggcgcaaaatgctcaggcacaaatgttctctgatccaaacatggctatggatatgatgaagaagaacctttcaatgatcattccccagactctta # cttttgcttgggttaactttttcttctctggatttgtagcagccaagatacctttccccttgactcagaggtttcgctccatgttacaaaatggaatt # gatttgagcactgtagatgttagctatgtcagcagtcgctcatggtacttcctcaacctgttcggattaaggggtttatttagtctcattctgggaga # agaaaatgccacagatgatacccagcgtatgatgcaaatgagtgggttcggcgttgatcctacaaagcactgcacaagtatgtga] # protein sequence = [MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSQVPDSKIVREGQVIVRARNLRAAANYIPAKSFRARKVY # FNNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLN # LFGLRGLFSLILGEENATDDTQRMMQMSGFGVDPTKHCTSM] NW_003724208.1 AUGUSTUS transcript 139852 143461 0.01 - . g26.t2 NW_003724208.1 AUGUSTUS tts 139852 139852 . - . transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS exon 139852 140253 . - . transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS stop_codon 140236 140238 . - 0 transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS terminal 140236 140253 0.68 - 0 transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS internal 140333 140391 0.75 - 2 transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS internal 140571 140632 0.88 - 1 transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS internal 140716 140860 0.32 - 2 transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS internal 141298 141346 0.91 - 0 transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS internal 141437 141556 0.93 - 0 transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS internal 142962 143055 0.89 - 1 transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS initial 143143 143294 0.99 - 0 transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS intron 140254 140332 0.69 - . transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS intron 140392 140570 0.79 - . transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS intron 140633 140715 0.32 - . transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS intron 140861 141297 0.91 - . transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS intron 141347 141436 0.93 - . transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS intron 141557 142961 0.27 - . transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS intron 143056 143142 0.99 - . transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS CDS 140236 140253 0.68 - 0 transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS CDS 140333 140391 0.75 - 2 transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS exon 140333 140391 . - . transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS CDS 140571 140632 0.88 - 1 transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS exon 140571 140632 . - . transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS CDS 140716 140860 0.32 - 2 transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS exon 140716 140860 . - . transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS CDS 141298 141346 0.91 - 0 transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS exon 141298 141346 . - . transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS CDS 141437 141556 0.93 - 0 transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS exon 141437 141556 . - . transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS CDS 142962 143055 0.89 - 1 transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS exon 142962 143055 . - . transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS CDS 143143 143294 0.99 - 0 transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS exon 143143 143461 . - . transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS start_codon 143292 143294 . - 0 transcript_id "g26.t2"; gene_id "g26"; NW_003724208.1 AUGUSTUS tss 143461 143461 . - . transcript_id "g26.t2"; gene_id "g26"; # coding sequence = [atggcggaagatctggtgttggacacggccatcagagattgggtgcttataccactgtcggtggtgatggttctcatcg # gggtgctccgctatttcgtctccaagctcatgcgatcctctcaagtgcccgattccaaaatcgttagagaagggcaggtgattgttagggctcgaaac # ttgcgggcggcggcgaattacattccggccaagtcgtttcgtgctaggaaagtttacttcaataacgaggaaaatggattactgcatgttcctaaggg # tcaggcgcaaaatgctcaggcacaaatgttctctgatccaaacatggctatggatatgatgaagaagaacctttcaatgatcattccccagactctta # cttttgcttgggttaactttttcttctctggatttgtagcagccaagatacctttccccttgactcagaggtttcgctccatgttacaaaatggaatt # gatttgagcactgtagatgttagctatgtcagcagtcgctcatggtacttgcttaatatcaagaacaagaaagctattacttccagcctgtacttcct # caacctgttcggattaaggggtttatttagtctcattctgggagaagaaaatgccacagatgatacccagcgtatgatgcaaatgagtgggttcggcg # ttgatcctacaaagcactgcacaagtatgtga] # protein sequence = [MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSQVPDSKIVREGQVIVRARNLRAAANYIPAKSFRARKVY # FNNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYLLN # IKNKKAITSSLYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGFGVDPTKHCTSM] # end gene g26 ### # start gene g27 NW_003724208.1 AUGUSTUS gene 145286 147775 0.27 + . g27 NW_003724208.1 AUGUSTUS transcript 145286 147775 0.16 + . g27.t1 NW_003724208.1 AUGUSTUS tss 145286 145286 . + . transcript_id "g27.t1"; gene_id "g27"; NW_003724208.1 AUGUSTUS exon 145286 145761 . + . transcript_id "g27.t1"; gene_id "g27"; NW_003724208.1 AUGUSTUS start_codon 145348 145350 . + 0 transcript_id "g27.t1"; gene_id "g27"; NW_003724208.1 AUGUSTUS initial 145348 145761 0.99 + 0 transcript_id "g27.t1"; gene_id "g27"; NW_003724208.1 AUGUSTUS internal 145906 146017 1 + 0 transcript_id "g27.t1"; gene_id "g27"; NW_003724208.1 AUGUSTUS internal 146101 146182 0.98 + 2 transcript_id "g27.t1"; gene_id "g27"; NW_003724208.1 AUGUSTUS internal 147436 147487 0.98 + 1 transcript_id "g27.t1"; gene_id "g27"; NW_003724208.1 AUGUSTUS terminal 147569 147712 0.49 + 0 transcript_id "g27.t1"; gene_id "g27"; NW_003724208.1 AUGUSTUS intron 145762 145905 1 + . transcript_id "g27.t1"; gene_id "g27"; NW_003724208.1 AUGUSTUS intron 146018 146100 1 + . transcript_id "g27.t1"; gene_id "g27"; NW_003724208.1 AUGUSTUS intron 146183 147435 0.98 + . transcript_id "g27.t1"; gene_id "g27"; NW_003724208.1 AUGUSTUS intron 147488 147568 0.57 + . transcript_id "g27.t1"; gene_id "g27"; NW_003724208.1 AUGUSTUS CDS 145348 145761 0.99 + 0 transcript_id "g27.t1"; gene_id "g27"; NW_003724208.1 AUGUSTUS CDS 145906 146017 1 + 0 transcript_id "g27.t1"; gene_id "g27"; NW_003724208.1 AUGUSTUS exon 145906 146017 . + . transcript_id "g27.t1"; gene_id "g27"; NW_003724208.1 AUGUSTUS CDS 146101 146182 0.98 + 2 transcript_id "g27.t1"; gene_id "g27"; NW_003724208.1 AUGUSTUS exon 146101 146182 . + . transcript_id "g27.t1"; gene_id "g27"; NW_003724208.1 AUGUSTUS CDS 147436 147487 0.98 + 1 transcript_id "g27.t1"; gene_id "g27"; NW_003724208.1 AUGUSTUS exon 147436 147487 . + . transcript_id "g27.t1"; gene_id "g27"; NW_003724208.1 AUGUSTUS CDS 147569 147712 0.49 + 0 transcript_id "g27.t1"; gene_id "g27"; NW_003724208.1 AUGUSTUS exon 147569 147775 . + . transcript_id "g27.t1"; gene_id "g27"; NW_003724208.1 AUGUSTUS stop_codon 147710 147712 . + 0 transcript_id "g27.t1"; gene_id "g27"; NW_003724208.1 AUGUSTUS tts 147775 147775 . + . transcript_id "g27.t1"; gene_id "g27"; # coding sequence = [atgggcttaatctccttccccaccaatgtattctgccgcagaccactgtcgatctctcctccattgcgaaccaaatcaa # gttgttcgtacaatccttggcttaatctgaagtccattctgaagagacagcctcaaagagctcaagttttcaatgatcctcttctgtcattgtcgaac # caggctgtggttcagaggggcttgtctttaaggcgcaaacgcttaccgccggtagtgtcgtgcagttctgaaagcacagggccaagggaagaagataa # cagagctctggaagcagtccagaagctttacactgctattaagaacaaaaatgtgaaggaagtctcagatgtaattggagatgaatgccgatgtttct # gcaattttatctcagcgtcccaacccttccatggaaagaagcaagcgttggaatttttcgatcatctgatgaaaatcttgggagatcatgcttcaatc # aaattttcctttacaatgcatgatgggatggccgttggagttacatggagactagaatggaaaaacaatccggtgcctctgggaactggtttcagcta # ctacgtgtgccaagaataccgagggagggtggtgataaagaacgttaatatgcttatggacccgctgattcaccttggacccctgaggctgagaattg # cggggatagtgacgctcgtaatggacaagtttgggcacttaaccttcgagggtaagagaaagaaagatatatacatgtttctcattctctccttcacc # tttgccatactgttctttctaataacggcttcccattaa] # protein sequence = [MGLISFPTNVFCRRPLSISPPLRTKSSCSYNPWLNLKSILKRQPQRAQVFNDPLLSLSNQAVVQRGLSLRRKRLPPVV # SCSSESTGPREEDNRALEAVQKLYTAIKNKNVKEVSDVIGDECRCFCNFISASQPFHGKKQALEFFDHLMKILGDHASIKFSFTMHDGMAVGVTWRLE # WKNNPVPLGTGFSYYVCQEYRGRVVIKNVNMLMDPLIHLGPLRLRIAGIVTLVMDKFGHLTFEGKRKKDIYMFLILSFTFAILFFLITASH] NW_003724208.1 AUGUSTUS transcript 145286 147775 0.11 + . g27.t2 NW_003724208.1 AUGUSTUS tss 145286 145286 . + . transcript_id "g27.t2"; gene_id "g27"; NW_003724208.1 AUGUSTUS exon 145286 145761 . + . transcript_id "g27.t2"; gene_id "g27"; NW_003724208.1 AUGUSTUS start_codon 145348 145350 . + 0 transcript_id "g27.t2"; gene_id "g27"; NW_003724208.1 AUGUSTUS initial 145348 145761 0.99 + 0 transcript_id "g27.t2"; gene_id "g27"; NW_003724208.1 AUGUSTUS internal 145906 146017 1 + 0 transcript_id "g27.t2"; gene_id "g27"; NW_003724208.1 AUGUSTUS internal 146101 146182 0.98 + 2 transcript_id "g27.t2"; gene_id "g27"; NW_003724208.1 AUGUSTUS internal 147436 147487 0.98 + 1 transcript_id "g27.t2"; gene_id "g27"; NW_003724208.1 AUGUSTUS terminal 147571 147630 0.41 + 0 transcript_id "g27.t2"; gene_id "g27"; NW_003724208.1 AUGUSTUS intron 145762 145905 1 + . transcript_id "g27.t2"; gene_id "g27"; NW_003724208.1 AUGUSTUS intron 146018 146100 1 + . transcript_id "g27.t2"; gene_id "g27"; NW_003724208.1 AUGUSTUS intron 146183 147435 0.98 + . transcript_id "g27.t2"; gene_id "g27"; NW_003724208.1 AUGUSTUS intron 147488 147570 0.41 + . transcript_id "g27.t2"; gene_id "g27"; NW_003724208.1 AUGUSTUS CDS 145348 145761 0.99 + 0 transcript_id "g27.t2"; gene_id "g27"; NW_003724208.1 AUGUSTUS CDS 145906 146017 1 + 0 transcript_id "g27.t2"; gene_id "g27"; NW_003724208.1 AUGUSTUS exon 145906 146017 . + . transcript_id "g27.t2"; gene_id "g27"; NW_003724208.1 AUGUSTUS CDS 146101 146182 0.98 + 2 transcript_id "g27.t2"; gene_id "g27"; NW_003724208.1 AUGUSTUS exon 146101 146182 . + . transcript_id "g27.t2"; gene_id "g27"; NW_003724208.1 AUGUSTUS CDS 147436 147487 0.98 + 1 transcript_id "g27.t2"; gene_id "g27"; NW_003724208.1 AUGUSTUS exon 147436 147487 . + . transcript_id "g27.t2"; gene_id "g27"; NW_003724208.1 AUGUSTUS CDS 147571 147630 0.41 + 0 transcript_id "g27.t2"; gene_id "g27"; NW_003724208.1 AUGUSTUS exon 147571 147775 . + . transcript_id "g27.t2"; gene_id "g27"; NW_003724208.1 AUGUSTUS stop_codon 147628 147630 . + 0 transcript_id "g27.t2"; gene_id "g27"; NW_003724208.1 AUGUSTUS tts 147775 147775 . + . transcript_id "g27.t2"; gene_id "g27"; # coding sequence = [atgggcttaatctccttccccaccaatgtattctgccgcagaccactgtcgatctctcctccattgcgaaccaaatcaa # gttgttcgtacaatccttggcttaatctgaagtccattctgaagagacagcctcaaagagctcaagttttcaatgatcctcttctgtcattgtcgaac # caggctgtggttcagaggggcttgtctttaaggcgcaaacgcttaccgccggtagtgtcgtgcagttctgaaagcacagggccaagggaagaagataa # cagagctctggaagcagtccagaagctttacactgctattaagaacaaaaatgtgaaggaagtctcagatgtaattggagatgaatgccgatgtttct # gcaattttatctcagcgtcccaacccttccatggaaagaagcaagcgttggaatttttcgatcatctgatgaaaatcttgggagatcatgcttcaatc # aaattttcctttacaatgcatgatgggatggccgttggagttacatggagactagaatggaaaaacaatccggtgcctctgggaactggtttcagcta # ctacgtgtgccaagaataccgagggagggtggtgataaagaacgttaatatgcttatggacccgctgattcaccttggacccctgaggctgaattgcg # gggatagtgacgctcgtaatggacaagtttgggcacttaaccttcgagggtaa] # protein sequence = [MGLISFPTNVFCRRPLSISPPLRTKSSCSYNPWLNLKSILKRQPQRAQVFNDPLLSLSNQAVVQRGLSLRRKRLPPVV # SCSSESTGPREEDNRALEAVQKLYTAIKNKNVKEVSDVIGDECRCFCNFISASQPFHGKKQALEFFDHLMKILGDHASIKFSFTMHDGMAVGVTWRLE # WKNNPVPLGTGFSYYVCQEYRGRVVIKNVNMLMDPLIHLGPLRLNCGDSDARNGQVWALNLRG] # end gene g27 ### # start gene g28 NW_003724208.1 AUGUSTUS gene 147808 148401 0.85 - . g28 NW_003724208.1 AUGUSTUS transcript 147808 148401 0.42 - . g28.t1 NW_003724208.1 AUGUSTUS tts 147808 147808 . - . transcript_id "g28.t1"; gene_id "g28"; NW_003724208.1 AUGUSTUS exon 147808 148401 . - . transcript_id "g28.t1"; gene_id "g28"; NW_003724208.1 AUGUSTUS stop_codon 147971 147973 . - 0 transcript_id "g28.t1"; gene_id "g28"; NW_003724208.1 AUGUSTUS single 147971 148372 0.47 - 0 transcript_id "g28.t1"; gene_id "g28"; NW_003724208.1 AUGUSTUS CDS 147971 148372 0.47 - 0 transcript_id "g28.t1"; gene_id "g28"; NW_003724208.1 AUGUSTUS start_codon 148370 148372 . - 0 transcript_id "g28.t1"; gene_id "g28"; NW_003724208.1 AUGUSTUS tss 148401 148401 . - . transcript_id "g28.t1"; gene_id "g28"; # coding sequence = [atggctaggactactgacattggttttgtgctgggggtgatagtggtagtgcttgttgcagtggtgggtggagccaagt # ccatgaccatatgcagcatggactcaacccagctggctcagtgcctccctgcaattcgaggcccatcaccatcccctcctactaaagagtgttgtgca # gtcatccaaaaggccgatatgcactgcttgtgcagctacaagcatgccctccccaactttggcgtcaaccctggacttgccatggccttgcccaagaa # gtgtggcctcaacccaccacccgaatgtgacggtaagcctcctagccctgcatctaccatatcaagaacgataaccatatcatatcaagaatgctcat # ttctcagttcttgctctgcaggtccttga] # protein sequence = [MARTTDIGFVLGVIVVVLVAVVGGAKSMTICSMDSTQLAQCLPAIRGPSPSPPTKECCAVIQKADMHCLCSYKHALPN # FGVNPGLAMALPKKCGLNPPPECDGKPPSPASTISRTITISYQECSFLSSCSAGP] NW_003724208.1 AUGUSTUS transcript 147808 148401 0.43 - . g28.t2 NW_003724208.1 AUGUSTUS tts 147808 147808 . - . transcript_id "g28.t2"; gene_id "g28"; NW_003724208.1 AUGUSTUS exon 147808 147978 . - . transcript_id "g28.t2"; gene_id "g28"; NW_003724208.1 AUGUSTUS stop_codon 147971 147973 . - 0 transcript_id "g28.t2"; gene_id "g28"; NW_003724208.1 AUGUSTUS terminal 147971 147978 0.51 - 2 transcript_id "g28.t2"; gene_id "g28"; NW_003724208.1 AUGUSTUS initial 148066 148372 0.53 - 0 transcript_id "g28.t2"; gene_id "g28"; NW_003724208.1 AUGUSTUS intron 147979 148065 0.51 - . transcript_id "g28.t2"; gene_id "g28"; NW_003724208.1 AUGUSTUS CDS 147971 147978 0.51 - 2 transcript_id "g28.t2"; gene_id "g28"; NW_003724208.1 AUGUSTUS CDS 148066 148372 0.53 - 0 transcript_id "g28.t2"; gene_id "g28"; NW_003724208.1 AUGUSTUS exon 148066 148401 . - . transcript_id "g28.t2"; gene_id "g28"; NW_003724208.1 AUGUSTUS start_codon 148370 148372 . - 0 transcript_id "g28.t2"; gene_id "g28"; NW_003724208.1 AUGUSTUS tss 148401 148401 . - . transcript_id "g28.t2"; gene_id "g28"; # coding sequence = [atggctaggactactgacattggttttgtgctgggggtgatagtggtagtgcttgttgcagtggtgggtggagccaagt # ccatgaccatatgcagcatggactcaacccagctggctcagtgcctccctgcaattcgaggcccatcaccatcccctcctactaaagagtgttgtgca # gtcatccaaaaggccgatatgcactgcttgtgcagctacaagcatgccctccccaactttggcgtcaaccctggacttgccatggccttgcccaagaa # gtgtggcctcaacccaccacccgaatgtgacggtccttga] # protein sequence = [MARTTDIGFVLGVIVVVLVAVVGGAKSMTICSMDSTQLAQCLPAIRGPSPSPPTKECCAVIQKADMHCLCSYKHALPN # FGVNPGLAMALPKKCGLNPPPECDGP] # end gene g28 ### # start gene g29 NW_003724208.1 AUGUSTUS gene 151131 154391 0.03 - . g29 NW_003724208.1 AUGUSTUS transcript 151131 154391 0.03 - . g29.t1 NW_003724208.1 AUGUSTUS tts 151131 151131 . - . transcript_id "g29.t1"; gene_id "g29"; NW_003724208.1 AUGUSTUS exon 151131 152275 . - . transcript_id "g29.t1"; gene_id "g29"; NW_003724208.1 AUGUSTUS stop_codon 152049 152051 . - 0 transcript_id "g29.t1"; gene_id "g29"; NW_003724208.1 AUGUSTUS terminal 152049 152275 0.43 - 2 transcript_id "g29.t1"; gene_id "g29"; NW_003724208.1 AUGUSTUS internal 152364 152535 1 - 0 transcript_id "g29.t1"; gene_id "g29"; NW_003724208.1 AUGUSTUS internal 152650 152761 0.89 - 1 transcript_id "g29.t1"; gene_id "g29"; NW_003724208.1 AUGUSTUS initial 153690 154135 0.93 - 0 transcript_id "g29.t1"; gene_id "g29"; NW_003724208.1 AUGUSTUS intron 152276 152363 1 - . transcript_id "g29.t1"; gene_id "g29"; NW_003724208.1 AUGUSTUS intron 152536 152649 0.89 - . transcript_id "g29.t1"; gene_id "g29"; NW_003724208.1 AUGUSTUS intron 152762 153689 0.95 - . transcript_id "g29.t1"; gene_id "g29"; NW_003724208.1 AUGUSTUS CDS 152049 152275 0.43 - 2 transcript_id "g29.t1"; gene_id "g29"; NW_003724208.1 AUGUSTUS CDS 152364 152535 1 - 0 transcript_id "g29.t1"; gene_id "g29"; NW_003724208.1 AUGUSTUS exon 152364 152535 . - . transcript_id "g29.t1"; gene_id "g29"; NW_003724208.1 AUGUSTUS CDS 152650 152761 0.89 - 1 transcript_id "g29.t1"; gene_id "g29"; NW_003724208.1 AUGUSTUS exon 152650 152761 . - . transcript_id "g29.t1"; gene_id "g29"; NW_003724208.1 AUGUSTUS CDS 153690 154135 0.93 - 0 transcript_id "g29.t1"; gene_id "g29"; NW_003724208.1 AUGUSTUS exon 153690 154391 . - . transcript_id "g29.t1"; gene_id "g29"; NW_003724208.1 AUGUSTUS start_codon 154133 154135 . - 0 transcript_id "g29.t1"; gene_id "g29"; NW_003724208.1 AUGUSTUS tss 154391 154391 . - . transcript_id "g29.t1"; gene_id "g29"; # coding sequence = [atggtgtcggatcaagatatcgcgaaaggtgtggagacactgctccgtcagtctgagcccaactcattcacctccttaa # acggcatcgttaagcagctggaagccaaactagggctcgacctgtcccataaggctgtcttcatcagagaccagatcagtttcctgctccggtctcac # cctcagccccttcccccaaaagaccattttgccctccagcaacacccccaattcctcagtccccacccccaaatcccttcccattttgcccttcagca # ccaccgcccaccgccggaagacctcaacttcctgtaccccctcccccagcctcagccgcagacgcagacgcagccgcagccgcagccgcagacgcagc # cgcatcacctgccgaaaggtgaagcctttctgcagaatgcagctagtgtcgccgcccaagcgcccaaagaaagtgctccagctgcagccaaaagaaga # ggtggctcggggggtctaaacaaagtctgtggggtttcaactgaacttcaggctgttgttggcgagccaaccatgccaaggacacagattgtgaagca # gctttgggcatacattaggaaaaacaacctccaagatcctagtaacaagcgaaagataatttgtgatgatgccctccgcttggtgtttgagacagatt # ctactgatatgttcaagatgaataagttgcttgctaaacatatcattccgcttgaaccttcaagagaatccagtcaagctaaacggttgaaggtggat # gttgagtctgcaactgaaagtagtgaagccagtccatctcctgtaatgatatctgatgcacttgccacgttttttggtactggagaaagggagatgct # ccaagaagaggccctaaggcgtgtttgggagtacataaaggtcaaccaattagaggtgggtataaggtgcacatgtcgtgcctttcttacttga] # protein sequence = [MVSDQDIAKGVETLLRQSEPNSFTSLNGIVKQLEAKLGLDLSHKAVFIRDQISFLLRSHPQPLPPKDHFALQQHPQFL # SPHPQIPSHFALQHHRPPPEDLNFLYPLPQPQPQTQTQPQPQPQTQPHHLPKGEAFLQNAASVAAQAPKESAPAAAKRRGGSGGLNKVCGVSTELQAV # VGEPTMPRTQIVKQLWAYIRKNNLQDPSNKRKIICDDALRLVFETDSTDMFKMNKLLAKHIIPLEPSRESSQAKRLKVDVESATESSEASPSPVMISD # ALATFFGTGEREMLQEEALRRVWEYIKVNQLEVGIRCTCRAFLT] # end gene g29 ### # start gene g30 NW_003724208.1 AUGUSTUS gene 156586 160578 0.05 + . g30 NW_003724208.1 AUGUSTUS transcript 157556 160578 0.02 + . g30.t1 NW_003724208.1 AUGUSTUS tss 157556 157556 . + . transcript_id "g30.t1"; gene_id "g30"; NW_003724208.1 AUGUSTUS exon 157556 157683 . + . transcript_id "g30.t1"; gene_id "g30"; NW_003724208.1 AUGUSTUS exon 159040 159107 . + . transcript_id "g30.t1"; gene_id "g30"; NW_003724208.1 AUGUSTUS start_codon 159064 159066 . + 0 transcript_id "g30.t1"; gene_id "g30"; NW_003724208.1 AUGUSTUS initial 159064 159107 0.41 + 0 transcript_id "g30.t1"; gene_id "g30"; NW_003724208.1 AUGUSTUS internal 159202 159238 0.64 + 1 transcript_id "g30.t1"; gene_id "g30"; NW_003724208.1 AUGUSTUS internal 159779 160000 1 + 0 transcript_id "g30.t1"; gene_id "g30"; NW_003724208.1 AUGUSTUS terminal 160084 160305 0.91 + 0 transcript_id "g30.t1"; gene_id "g30"; NW_003724208.1 AUGUSTUS intron 159108 159201 0.41 + . transcript_id "g30.t1"; gene_id "g30"; NW_003724208.1 AUGUSTUS intron 159239 159778 0.64 + . transcript_id "g30.t1"; gene_id "g30"; NW_003724208.1 AUGUSTUS intron 160001 160083 0.91 + . transcript_id "g30.t1"; gene_id "g30"; NW_003724208.1 AUGUSTUS CDS 159064 159107 0.41 + 0 transcript_id "g30.t1"; gene_id "g30"; NW_003724208.1 AUGUSTUS CDS 159202 159238 0.64 + 1 transcript_id "g30.t1"; gene_id "g30"; NW_003724208.1 AUGUSTUS exon 159202 159238 . + . transcript_id "g30.t1"; gene_id "g30"; NW_003724208.1 AUGUSTUS CDS 159779 160000 1 + 0 transcript_id "g30.t1"; gene_id "g30"; NW_003724208.1 AUGUSTUS exon 159779 160000 . + . transcript_id "g30.t1"; gene_id "g30"; NW_003724208.1 AUGUSTUS CDS 160084 160305 0.91 + 0 transcript_id "g30.t1"; gene_id "g30"; NW_003724208.1 AUGUSTUS exon 160084 160578 . + . transcript_id "g30.t1"; gene_id "g30"; NW_003724208.1 AUGUSTUS stop_codon 160303 160305 . + 0 transcript_id "g30.t1"; gene_id "g30"; NW_003724208.1 AUGUSTUS tts 160578 160578 . + . transcript_id "g30.t1"; gene_id "g30"; # coding sequence = [atgccatgtggaagaaaggaatcaaaatacccacaagagttttgccatgccctgaataatatgcttgagatccttccca # aggaagaagcaaggaaagcactagaaagtgcacttgggggaaagaaagatgaatttgaaaaatggaacaaagaaattaagaagagagaggaggtgggg # ggaggcggtgaggctggtggaggaggttggtttggatggggtggacgttttggttggtccaatgatgatcatttctggcaagaggcacaacaagcaag # ccttgccatcttgggtatcattatcatgtatctcataattgcaaaaggcgaagtgttgcttgctgtcatcttcaatccattgctgtttgctttgcgag # gaacgagaaatgggtttaacttcataatctcgcgtatactgcagaaggtatctccagctactcatacagggcttgataatatgccaaaaaaggaagtc # tatactcctgtctctgccaaagagagtgtagttagaaaatggggaggggaataa] # protein sequence = [MPCGRKESKYPQEFCHALNNMLEILPKEEARKALESALGGKKDEFEKWNKEIKKREEVGGGGEAGGGGWFGWGGRFGW # SNDDHFWQEAQQASLAILGIIIMYLIIAKGEVLLAVIFNPLLFALRGTRNGFNFIISRILQKVSPATHTGLDNMPKKEVYTPVSAKESVVRKWGGE] NW_003724208.1 AUGUSTUS transcript 156586 160578 0.03 + . g30.t2 NW_003724208.1 AUGUSTUS tss 156586 156586 . + . transcript_id "g30.t2"; gene_id "g30"; NW_003724208.1 AUGUSTUS exon 156586 156634 . + . transcript_id "g30.t2"; gene_id "g30"; NW_003724208.1 AUGUSTUS exon 157433 157683 . + . transcript_id "g30.t2"; gene_id "g30"; NW_003724208.1 AUGUSTUS start_codon 157501 157503 . + 0 transcript_id "g30.t2"; gene_id "g30"; NW_003724208.1 AUGUSTUS initial 157501 157683 0.38 + 0 transcript_id "g30.t2"; gene_id "g30"; NW_003724208.1 AUGUSTUS internal 159779 160000 1 + 0 transcript_id "g30.t2"; gene_id "g30"; NW_003724208.1 AUGUSTUS terminal 160084 160305 0.91 + 0 transcript_id "g30.t2"; gene_id "g30"; NW_003724208.1 AUGUSTUS intron 157684 159778 0.23 + . transcript_id "g30.t2"; gene_id "g30"; NW_003724208.1 AUGUSTUS intron 160001 160083 0.91 + . transcript_id "g30.t2"; gene_id "g30"; NW_003724208.1 AUGUSTUS CDS 157501 157683 0.38 + 0 transcript_id "g30.t2"; gene_id "g30"; NW_003724208.1 AUGUSTUS CDS 159779 160000 1 + 0 transcript_id "g30.t2"; gene_id "g30"; NW_003724208.1 AUGUSTUS exon 159779 160000 . + . transcript_id "g30.t2"; gene_id "g30"; NW_003724208.1 AUGUSTUS CDS 160084 160305 0.91 + 0 transcript_id "g30.t2"; gene_id "g30"; NW_003724208.1 AUGUSTUS exon 160084 160578 . + . transcript_id "g30.t2"; gene_id "g30"; NW_003724208.1 AUGUSTUS stop_codon 160303 160305 . + 0 transcript_id "g30.t2"; gene_id "g30"; NW_003724208.1 AUGUSTUS tts 160578 160578 . + . transcript_id "g30.t2"; gene_id "g30"; # coding sequence = [atggcgcagcttcttaccctacgccctccaatcacagcctttcgatctgcgccatccacgcgcactgattcagctgttt # tatcgtgttgccctaaaaccctaaaccccaaatgggcctttctgcagcagaagctcaagtgcaatggcagattttcttgccttttctcaaacaatcgc # aagcaggaagaagcaaggaaagcactagaaagtgcacttgggggaaagaaagatgaatttgaaaaatggaacaaagaaattaagaagagagaggaggt # ggggggaggcggtgaggctggtggaggaggttggtttggatggggtggacgttttggttggtccaatgatgatcatttctggcaagaggcacaacaag # caagccttgccatcttgggtatcattatcatgtatctcataattgcaaaaggcgaagtgttgcttgctgtcatcttcaatccattgctgtttgctttg # cgaggaacgagaaatgggtttaacttcataatctcgcgtatactgcagaaggtatctccagctactcatacagggcttgataatatgccaaaaaagga # agtctatactcctgtctctgccaaagagagtgtagttagaaaatggggaggggaataa] # protein sequence = [MAQLLTLRPPITAFRSAPSTRTDSAVLSCCPKTLNPKWAFLQQKLKCNGRFSCLFSNNRKQEEARKALESALGGKKDE # FEKWNKEIKKREEVGGGGEAGGGGWFGWGGRFGWSNDDHFWQEAQQASLAILGIIIMYLIIAKGEVLLAVIFNPLLFALRGTRNGFNFIISRILQKVS # PATHTGLDNMPKKEVYTPVSAKESVVRKWGGE] # end gene g30 ### # start gene g31 NW_003724208.1 AUGUSTUS gene 162506 165638 0.06 + . g31 NW_003724208.1 AUGUSTUS transcript 162506 165638 0.06 + . g31.t1 NW_003724208.1 AUGUSTUS tss 162506 162506 . + . transcript_id "g31.t1"; gene_id "g31"; NW_003724208.1 AUGUSTUS exon 162506 163116 . + . transcript_id "g31.t1"; gene_id "g31"; NW_003724208.1 AUGUSTUS start_codon 162865 162867 . + 0 transcript_id "g31.t1"; gene_id "g31"; NW_003724208.1 AUGUSTUS initial 162865 163116 0.54 + 0 transcript_id "g31.t1"; gene_id "g31"; NW_003724208.1 AUGUSTUS internal 163218 163284 0.98 + 0 transcript_id "g31.t1"; gene_id "g31"; NW_003724208.1 AUGUSTUS internal 163985 164203 0.94 + 2 transcript_id "g31.t1"; gene_id "g31"; NW_003724208.1 AUGUSTUS internal 164301 164425 1 + 2 transcript_id "g31.t1"; gene_id "g31"; NW_003724208.1 AUGUSTUS terminal 164901 164975 0.99 + 0 transcript_id "g31.t1"; gene_id "g31"; NW_003724208.1 AUGUSTUS intron 163117 163217 0.98 + . transcript_id "g31.t1"; gene_id "g31"; NW_003724208.1 AUGUSTUS intron 163285 163984 0.94 + . transcript_id "g31.t1"; gene_id "g31"; NW_003724208.1 AUGUSTUS intron 164204 164300 1 + . transcript_id "g31.t1"; gene_id "g31"; NW_003724208.1 AUGUSTUS intron 164426 164900 0.93 + . transcript_id "g31.t1"; gene_id "g31"; NW_003724208.1 AUGUSTUS CDS 162865 163116 0.54 + 0 transcript_id "g31.t1"; gene_id "g31"; NW_003724208.1 AUGUSTUS CDS 163218 163284 0.98 + 0 transcript_id "g31.t1"; gene_id "g31"; NW_003724208.1 AUGUSTUS exon 163218 163284 . + . transcript_id "g31.t1"; gene_id "g31"; NW_003724208.1 AUGUSTUS CDS 163985 164203 0.94 + 2 transcript_id "g31.t1"; gene_id "g31"; NW_003724208.1 AUGUSTUS exon 163985 164203 . + . transcript_id "g31.t1"; gene_id "g31"; NW_003724208.1 AUGUSTUS CDS 164301 164425 1 + 2 transcript_id "g31.t1"; gene_id "g31"; NW_003724208.1 AUGUSTUS exon 164301 164425 . + . transcript_id "g31.t1"; gene_id "g31"; NW_003724208.1 AUGUSTUS CDS 164901 164975 0.99 + 0 transcript_id "g31.t1"; gene_id "g31"; NW_003724208.1 AUGUSTUS exon 164901 165638 . + . transcript_id "g31.t1"; gene_id "g31"; NW_003724208.1 AUGUSTUS stop_codon 164973 164975 . + 0 transcript_id "g31.t1"; gene_id "g31"; NW_003724208.1 AUGUSTUS tts 165638 165638 . + . transcript_id "g31.t1"; gene_id "g31"; # coding sequence = [atgtctctggctgttggggtggtttccagttccaaaagcatgggttttgacaacaatgagggtgcagcaaacactgatc # tttcagagactaagagcacagcaaagactcctgcagatgaagagagaggtgatgaacatggagggtgtgagaattctgtggatgcaactgaggaagag # gaagaggaagatgaagagaggaagatagagttgggtcctcagttcactctcaaagaacaacttgagaaagataaggatgatgagagcttgaggaggtg # gaaggaacagcttcttggcagtgtggatttgaattctgttggagaaactctagaaccagatgttaagatcctggaacttgcaataaagtcccctggta # gacctgacattgttcttccaatccccgaatcgggaaatcctaagggcttgtggtttactttgaaagaaggcagtcgttacagcatgaacttcgctttc # aaagtcagtaataacattgtatcaggcctcagatgcaccaatgttgtttggaaaacaggactcaaggtggacagcacaaaagagatgcttggaacctt # cagtcctcagcaggagacttacactcatgagatgcctgaagagacgaccccatctgggatctttgctagaggaacttactcagctaaaaccaagtttc # ttgatgacgataacaagtgctacttggagatcaactacagcttcgacatcaggaaagattggcagtcatga] # protein sequence = [MSLAVGVVSSSKSMGFDNNEGAANTDLSETKSTAKTPADEERGDEHGGCENSVDATEEEEEEDEERKIELGPQFTLKE # QLEKDKDDESLRRWKEQLLGSVDLNSVGETLEPDVKILELAIKSPGRPDIVLPIPESGNPKGLWFTLKEGSRYSMNFAFKVSNNIVSGLRCTNVVWKT # GLKVDSTKEMLGTFSPQQETYTHEMPEETTPSGIFARGTYSAKTKFLDDDNKCYLEINYSFDIRKDWQS] # end gene g31 ### # start gene g32 NW_003724208.1 AUGUSTUS gene 172306 180373 0.09 - . g32 NW_003724208.1 AUGUSTUS transcript 176768 180373 0.05 - . g32.t1 NW_003724208.1 AUGUSTUS tts 176768 176768 . - . transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 176768 177169 . - . transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS stop_codon 177152 177154 . - 0 transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS terminal 177152 177169 0.68 - 0 transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS internal 177249 177307 0.84 - 2 transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS internal 177487 177548 0.93 - 1 transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS internal 177677 177776 0.97 - 2 transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS internal 178217 178265 1 - 0 transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS internal 178357 178476 0.99 - 0 transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS internal 179883 179976 0.84 - 1 transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS initial 180064 180215 0.99 - 0 transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 177170 177248 0.68 - . transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 177308 177486 0.84 - . transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 177549 177676 0.97 - . transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 177777 178216 1 - . transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 178266 178356 1 - . transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 178477 179882 0.18 - . transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 179977 180063 0.99 - . transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 177152 177169 0.68 - 0 transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 177249 177307 0.84 - 2 transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 177249 177307 . - . transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 177487 177548 0.93 - 1 transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 177487 177548 . - . transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 177677 177776 0.97 - 2 transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 177677 177776 . - . transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 178217 178265 1 - 0 transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 178217 178265 . - . transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 178357 178476 0.99 - 0 transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 178357 178476 . - . transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 179883 179976 0.84 - 1 transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 179883 179976 . - . transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 180064 180215 0.99 - 0 transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 180064 180373 . - . transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS start_codon 180213 180215 . - 0 transcript_id "g32.t1"; gene_id "g32"; NW_003724208.1 AUGUSTUS tss 180373 180373 . - . transcript_id "g32.t1"; gene_id "g32"; # coding sequence = [atggcggaagatctggtgctggacacggccatcagagattgggtgcttataccactgtcggtggtgatggttctcatcg # gggtgctccgctatttcgtctccaagctcatgcgatcctctcaagtgcccgattccaaaatcgttagagaagggcaggtgattgttagggctcgaaac # ttgcgggcggcggcgaattacattccggccaaatcgtttcgtgctaggaaagtttacttcaataacgaggaaaatggattactgcatgttcctaaggg # tcaggcgcaaaatgctcaggcacaaatgttctctgatccaaacatggctatggatatgatgaagaagaacctttcaatgatcataccccagactctta # cttttgcttgggttaactttttcttctctggatttgtagcagccaagatacctttccccttgactcagaggtttcgctccatgttacaaaatggaatt # gatttgagcactgtagatgttagctatgtcagcagtcgctcatggtacttcctcaacctgttcggattaaggggtttatttagtctcattctgggaga # agaaaatgccacagatgatacccagcgtatgatgcaaatgagtgggttcggcgttgatcctacaaagcactgcacaagtatgtga] # protein sequence = [MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSQVPDSKIVREGQVIVRARNLRAAANYIPAKSFRARKVY # FNNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLN # LFGLRGLFSLILGEENATDDTQRMMQMSGFGVDPTKHCTSM] NW_003724208.1 AUGUSTUS transcript 176768 180373 0.03 - . g32.t2 NW_003724208.1 AUGUSTUS tts 176768 176768 . - . transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 176768 177169 . - . transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS stop_codon 177152 177154 . - 0 transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS terminal 177152 177169 0.68 - 0 transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS internal 177249 177307 0.84 - 2 transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS internal 177487 177548 0.93 - 1 transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS internal 177677 177776 0.97 - 2 transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS internal 178217 178265 1 - 0 transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS internal 178357 178476 0.99 - 0 transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS internal 178576 178637 0.63 - 2 transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS internal 179308 179443 0.27 - 0 transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS internal 179883 179976 0.84 - 1 transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS initial 180064 180215 0.99 - 0 transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 177170 177248 0.68 - . transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 177308 177486 0.84 - . transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 177549 177676 0.97 - . transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 177777 178216 1 - . transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 178266 178356 1 - . transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 178477 178575 0.63 - . transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 178638 179307 0.34 - . transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 179444 179882 0.23 - . transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 179977 180063 0.99 - . transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 177152 177169 0.68 - 0 transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 177249 177307 0.84 - 2 transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 177249 177307 . - . transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 177487 177548 0.93 - 1 transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 177487 177548 . - . transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 177677 177776 0.97 - 2 transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 177677 177776 . - . transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 178217 178265 1 - 0 transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 178217 178265 . - . transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 178357 178476 0.99 - 0 transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 178357 178476 . - . transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 178576 178637 0.63 - 2 transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 178576 178637 . - . transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 179308 179443 0.27 - 0 transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 179308 179443 . - . transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 179883 179976 0.84 - 1 transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 179883 179976 . - . transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 180064 180215 0.99 - 0 transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 180064 180373 . - . transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS start_codon 180213 180215 . - 0 transcript_id "g32.t2"; gene_id "g32"; NW_003724208.1 AUGUSTUS tss 180373 180373 . - . transcript_id "g32.t2"; gene_id "g32"; # coding sequence = [atggcggaagatctggtgctggacacggccatcagagattgggtgcttataccactgtcggtggtgatggttctcatcg # gggtgctccgctatttcgtctccaagctcatgcgatcctctcaagtgcccgattccaaaatcgttagagaagggcaggtgattgttagggctcgaaac # ttgcgggcggcggcgaattacattccggccaaatcgtttcgtgctaggaaagtttacttcaataacgagatatgtgcttctgagaatgaccataacaa # agcagacattactcacagaactagaacaggatggatgaagtggagagttgctcctagcatgttgtgggttgaatccatgcttcccaatttgaacggaa # aattatgtgtgtatcttttggctggctttgctttatgggctgcctcaattgtaataactcatagaagccaggaaaatggattactgcatgttcctaag # ggtcaggcgcaaaatgctcaggcacaaatgttctctgatccaaacatggctatggatatgatgaagaagaacctttcaatgatcataccccagactct # tacttttgcttgggttaactttttcttctctggatttgtagcagccaagatacctttccccttgactcagaggtttcgctccatgttacaaaatggaa # ttgatttgagcactgtagatgttagctatgtcagcagtcgctcatggtacttcctcaacctgttcggattaaggggtttatttagtctcattctggga # gaagaaaatgccacagatgatacccagcgtatgatgcaaatgagtgggttcggcgttgatcctacaaagcactgcacaagtatgtga] # protein sequence = [MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSQVPDSKIVREGQVIVRARNLRAAANYIPAKSFRARKVY # FNNEICASENDHNKADITHRTRTGWMKWRVAPSMLWVESMLPNLNGKLCVYLLAGFALWAASIVITHRSQENGLLHVPKGQAQNAQAQMFSDPNMAMD # MMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGFGV # DPTKHCTSM] NW_003724208.1 AUGUSTUS transcript 172306 180373 0.01 - . g32.t3 NW_003724208.1 AUGUSTUS tts 172306 172306 . - . transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 172306 173336 . - . transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS stop_codon 173085 173087 . - 0 transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS terminal 173085 173336 0.33 - 0 transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS internal 173452 173635 0.23 - 1 transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS internal 174621 174766 0.08 - 0 transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS internal 177249 177307 0.84 - 2 transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS internal 177487 177548 0.93 - 1 transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS internal 177677 177776 0.97 - 2 transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS internal 178217 178265 1 - 0 transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS internal 178357 178476 0.99 - 0 transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS internal 179883 179976 0.84 - 1 transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS initial 180064 180215 0.99 - 0 transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 173337 173451 0.33 - . transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 173636 174620 0.32 - . transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 174767 177248 0.07 - . transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 177308 177486 0.84 - . transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 177549 177676 0.97 - . transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 177777 178216 1 - . transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 178266 178356 1 - . transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 178477 179882 0.18 - . transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS intron 179977 180063 0.99 - . transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 173085 173336 0.33 - 0 transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 173452 173635 0.23 - 1 transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 173452 173635 . - . transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 174621 174766 0.08 - 0 transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 174621 174766 . - . transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 177249 177307 0.84 - 2 transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 177249 177307 . - . transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 177487 177548 0.93 - 1 transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 177487 177548 . - . transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 177677 177776 0.97 - 2 transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 177677 177776 . - . transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 178217 178265 1 - 0 transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 178217 178265 . - . transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 178357 178476 0.99 - 0 transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 178357 178476 . - . transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 179883 179976 0.84 - 1 transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 179883 179976 . - . transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS CDS 180064 180215 0.99 - 0 transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS exon 180064 180373 . - . transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS start_codon 180213 180215 . - 0 transcript_id "g32.t3"; gene_id "g32"; NW_003724208.1 AUGUSTUS tss 180373 180373 . - . transcript_id "g32.t3"; gene_id "g32"; # coding sequence = [atggcggaagatctggtgctggacacggccatcagagattgggtgcttataccactgtcggtggtgatggttctcatcg # gggtgctccgctatttcgtctccaagctcatgcgatcctctcaagtgcccgattccaaaatcgttagagaagggcaggtgattgttagggctcgaaac # ttgcgggcggcggcgaattacattccggccaaatcgtttcgtgctaggaaagtttacttcaataacgaggaaaatggattactgcatgttcctaaggg # tcaggcgcaaaatgctcaggcacaaatgttctctgatccaaacatggctatggatatgatgaagaagaacctttcaatgatcataccccagactctta # cttttgcttgggttaactttttcttctctggatttgtagcagccaagatacctttccccttgactcagaggtttcgctccatgttacaaaatggaatt # gatttgagcactgtagatgttagctatgtcagcagtcgctcatggtacttcctcaacctgttcggattaaggggtttatttagtctcattctgggaga # agaaaatgccacagatgatacccagcgtatgatgcaaatgagtgggttcggcgttgatcctacaaagctgtggattcttacacccaaccaaatgaaca # taaacctcatatacccttttggtttcagaaggcattacaacaaggccatgcctagtgttaaatcaagaaaagcttttcacattaccatgtactatatg # ttaactagtgatctaagtttcaatgaagatgcttccttgcctctgaatgttcttctgttaatgtccttacaagtctatattaagaatctaagatcaag # gaagctgtcttctgcactgccttcttgcccttccatgcaaggtgacatttattggcattcacagctcagtcaaatgagggtggtgccctttgatgctg # ctcaaatggaatcatcctgtgttgcccatctgccagtggtggggcaagcaggcaatgatgagtcacttgagctaggcaatggttgccatttcagttat # tacttggcagatcaaggcttattctctctcatgcctcaaccgatggctaaaagggatgaaagcaagtttacatcaaagctaatgtttatgaaaggatg # tttctcttttagaagtgacaacaaaaaccccatcatgccatctgatattcttctagtataa] # protein sequence = [MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSQVPDSKIVREGQVIVRARNLRAAANYIPAKSFRARKVY # FNNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLN # LFGLRGLFSLILGEENATDDTQRMMQMSGFGVDPTKLWILTPNQMNINLIYPFGFRRHYNKAMPSVKSRKAFHITMYYMLTSDLSFNEDASLPLNVLL # LMSLQVYIKNLRSRKLSSALPSCPSMQGDIYWHSQLSQMRVVPFDAAQMESSCVAHLPVVGQAGNDESLELGNGCHFSYYLADQGLFSLMPQPMAKRD # ESKFTSKLMFMKGCFSFRSDNKNPIMPSDILLV] # end gene g32 ### # start gene g33 NW_003724208.1 AUGUSTUS gene 182188 184582 0.06 + . g33 NW_003724208.1 AUGUSTUS transcript 182188 184582 0.06 + . g33.t1 NW_003724208.1 AUGUSTUS tss 182188 182188 . + . transcript_id "g33.t1"; gene_id "g33"; NW_003724208.1 AUGUSTUS exon 182188 182661 . + . transcript_id "g33.t1"; gene_id "g33"; NW_003724208.1 AUGUSTUS start_codon 182244 182246 . + 0 transcript_id "g33.t1"; gene_id "g33"; NW_003724208.1 AUGUSTUS initial 182244 182661 0.53 + 0 transcript_id "g33.t1"; gene_id "g33"; NW_003724208.1 AUGUSTUS internal 183004 183085 0.51 + 2 transcript_id "g33.t1"; gene_id "g33"; NW_003724208.1 AUGUSTUS internal 184255 184306 0.75 + 1 transcript_id "g33.t1"; gene_id "g33"; NW_003724208.1 AUGUSTUS terminal 184376 184519 0.49 + 0 transcript_id "g33.t1"; gene_id "g33"; NW_003724208.1 AUGUSTUS intron 182662 183003 0.5 + . transcript_id "g33.t1"; gene_id "g33"; NW_003724208.1 AUGUSTUS intron 183086 184254 0.54 + . transcript_id "g33.t1"; gene_id "g33"; NW_003724208.1 AUGUSTUS intron 184307 184375 0.67 + . transcript_id "g33.t1"; gene_id "g33"; NW_003724208.1 AUGUSTUS CDS 182244 182661 0.53 + 0 transcript_id "g33.t1"; gene_id "g33"; NW_003724208.1 AUGUSTUS CDS 183004 183085 0.51 + 2 transcript_id "g33.t1"; gene_id "g33"; NW_003724208.1 AUGUSTUS exon 183004 183085 . + . transcript_id "g33.t1"; gene_id "g33"; NW_003724208.1 AUGUSTUS CDS 184255 184306 0.75 + 1 transcript_id "g33.t1"; gene_id "g33"; NW_003724208.1 AUGUSTUS exon 184255 184306 . + . transcript_id "g33.t1"; gene_id "g33"; NW_003724208.1 AUGUSTUS CDS 184376 184519 0.49 + 0 transcript_id "g33.t1"; gene_id "g33"; NW_003724208.1 AUGUSTUS exon 184376 184582 . + . transcript_id "g33.t1"; gene_id "g33"; NW_003724208.1 AUGUSTUS stop_codon 184517 184519 . + 0 transcript_id "g33.t1"; gene_id "g33"; NW_003724208.1 AUGUSTUS tts 184582 184582 . + . transcript_id "g33.t1"; gene_id "g33"; # coding sequence = [atgggcttaatctccttccccaccaatgtattctgccgcagaccactgtcgatctctcctccattgcgaaccaaatcaa # gttgttcgtacaatccttggcttaatctgaagtccattctgaagagacagcctcaaagagctcaagttttcaatgatcctcttctgccattgtcgaac # caggctgtagttcagaggggcttgtctttaaggcgcaaacgcttaccgccggtagtatcgtgcagttctgaaagcacagggccaagggaagaagataa # cagagctctggaagctgtccagaagctttacactgctattaagaacaaaaatgtgaaggaagtctcagatgtaattggagatgaatgccgatgtttct # gcaattttatctcagcttcccaacccttccatggaaaaaaggtagaatggaaaaacaatccggtgcctctgggaactggtttcagctactacgtgtgc # caagaataccgagggagggtggtgataaagaacgttaatatgcttatggacccgctgattcaccttggacccctcagactgagaattgcggggatagt # gacgctcgtaatggacaagtttgagcacttaaacttcgagggtaagagaaagaaagatatatacatgtttctcattctttccttcacctttgccatac # tgttctttctaataacggcttcccattaa] # protein sequence = [MGLISFPTNVFCRRPLSISPPLRTKSSCSYNPWLNLKSILKRQPQRAQVFNDPLLPLSNQAVVQRGLSLRRKRLPPVV # SCSSESTGPREEDNRALEAVQKLYTAIKNKNVKEVSDVIGDECRCFCNFISASQPFHGKKVEWKNNPVPLGTGFSYYVCQEYRGRVVIKNVNMLMDPL # IHLGPLRLRIAGIVTLVMDKFEHLNFEGKRKKDIYMFLILSFTFAILFFLITASH] # end gene g33 ### # start gene g34 NW_003724208.1 AUGUSTUS gene 184615 185203 0.86 - . g34 NW_003724208.1 AUGUSTUS transcript 184615 185203 0.38 - . g34.t1 NW_003724208.1 AUGUSTUS tts 184615 184615 . - . transcript_id "g34.t1"; gene_id "g34"; NW_003724208.1 AUGUSTUS exon 184615 185203 . - . transcript_id "g34.t1"; gene_id "g34"; NW_003724208.1 AUGUSTUS stop_codon 184778 184780 . - 0 transcript_id "g34.t1"; gene_id "g34"; NW_003724208.1 AUGUSTUS single 184778 185179 0.42 - 0 transcript_id "g34.t1"; gene_id "g34"; NW_003724208.1 AUGUSTUS CDS 184778 185179 0.42 - 0 transcript_id "g34.t1"; gene_id "g34"; NW_003724208.1 AUGUSTUS start_codon 185177 185179 . - 0 transcript_id "g34.t1"; gene_id "g34"; NW_003724208.1 AUGUSTUS tss 185203 185203 . - . transcript_id "g34.t1"; gene_id "g34"; # coding sequence = [atggctaggactactgacattggttttgtgctgggggtgatagtggtagtgcttgttgcagtggtgggtggagccaagt # ccatgaccatatgcagcatggactcaacccagctggctcagtgcctccctgcaattcgaggcccatcaccatcccctcctactaaagagtgttgtgca # gtcatccaaaaggccgatatgcactgcttgtgcagctacaagcatgccctccccaactttggcgtcaaccctggactcgccatggccttgcccaagaa # gtgtggcctcaacccaccacccgaatgtgacggtaagcctcctagccttgcatctaccatatcaagaacgataaccatatcatatcaagaatgctcat # ttctcagttcttgctctgcaggtccttga] # protein sequence = [MARTTDIGFVLGVIVVVLVAVVGGAKSMTICSMDSTQLAQCLPAIRGPSPSPPTKECCAVIQKADMHCLCSYKHALPN # FGVNPGLAMALPKKCGLNPPPECDGKPPSLASTISRTITISYQECSFLSSCSAGP] NW_003724208.1 AUGUSTUS transcript 184615 185203 0.48 - . g34.t2 NW_003724208.1 AUGUSTUS tts 184615 184615 . - . transcript_id "g34.t2"; gene_id "g34"; NW_003724208.1 AUGUSTUS exon 184615 184785 . - . transcript_id "g34.t2"; gene_id "g34"; NW_003724208.1 AUGUSTUS stop_codon 184778 184780 . - 0 transcript_id "g34.t2"; gene_id "g34"; NW_003724208.1 AUGUSTUS terminal 184778 184785 0.51 - 2 transcript_id "g34.t2"; gene_id "g34"; NW_003724208.1 AUGUSTUS initial 184873 185179 0.58 - 0 transcript_id "g34.t2"; gene_id "g34"; NW_003724208.1 AUGUSTUS intron 184786 184872 0.51 - . transcript_id "g34.t2"; gene_id "g34"; NW_003724208.1 AUGUSTUS CDS 184778 184785 0.51 - 2 transcript_id "g34.t2"; gene_id "g34"; NW_003724208.1 AUGUSTUS CDS 184873 185179 0.58 - 0 transcript_id "g34.t2"; gene_id "g34"; NW_003724208.1 AUGUSTUS exon 184873 185203 . - . transcript_id "g34.t2"; gene_id "g34"; NW_003724208.1 AUGUSTUS start_codon 185177 185179 . - 0 transcript_id "g34.t2"; gene_id "g34"; NW_003724208.1 AUGUSTUS tss 185203 185203 . - . transcript_id "g34.t2"; gene_id "g34"; # coding sequence = [atggctaggactactgacattggttttgtgctgggggtgatagtggtagtgcttgttgcagtggtgggtggagccaagt # ccatgaccatatgcagcatggactcaacccagctggctcagtgcctccctgcaattcgaggcccatcaccatcccctcctactaaagagtgttgtgca # gtcatccaaaaggccgatatgcactgcttgtgcagctacaagcatgccctccccaactttggcgtcaaccctggactcgccatggccttgcccaagaa # gtgtggcctcaacccaccacccgaatgtgacggtccttga] # protein sequence = [MARTTDIGFVLGVIVVVLVAVVGGAKSMTICSMDSTQLAQCLPAIRGPSPSPPTKECCAVIQKADMHCLCSYKHALPN # FGVNPGLAMALPKKCGLNPPPECDGP] # end gene g34 ### # start gene g35 NW_003724208.1 AUGUSTUS gene 186522 190963 0.02 - . g35 NW_003724208.1 AUGUSTUS transcript 186522 190963 0.02 - . g35.t1 NW_003724208.1 AUGUSTUS tts 186522 186522 . - . transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS exon 186522 187484 . - . transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS stop_codon 187323 187325 . - 0 transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS terminal 187323 187484 0.46 - 0 transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS internal 187758 187838 0.5 - 0 transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS internal 188688 188875 0.81 - 2 transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS internal 188964 189135 1 - 0 transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS internal 189250 189361 0.95 - 1 transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS initial 190298 190734 0.91 - 0 transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS intron 187485 187757 0.45 - . transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS intron 187839 188687 0.7 - . transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS intron 188876 188963 1 - . transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS intron 189136 189249 0.95 - . transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS intron 189362 190297 0.98 - . transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS CDS 187323 187484 0.46 - 0 transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS CDS 187758 187838 0.5 - 0 transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS exon 187758 187838 . - . transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS CDS 188688 188875 0.81 - 2 transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS exon 188688 188875 . - . transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS CDS 188964 189135 1 - 0 transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS exon 188964 189135 . - . transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS CDS 189250 189361 0.95 - 1 transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS exon 189250 189361 . - . transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS CDS 190298 190734 0.91 - 0 transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS exon 190298 190963 . - . transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS start_codon 190732 190734 . - 0 transcript_id "g35.t1"; gene_id "g35"; NW_003724208.1 AUGUSTUS tss 190963 190963 . - . transcript_id "g35.t1"; gene_id "g35"; # coding sequence = [atggtgtcggatcaagatatcgcgaaaggtgtggagacactgctccgtcagtctgagcccaactcattcacctccttaa # acggcgtcgttaagcagctggaagccaaactagggctcgacctgtcccataaggctgtcttcatcagagaccagatcagtttcctgctccggtctcac # cctcagccccttcccccaaaagaccattttgccctccagcaacacccccaattcctcagtccccacccccaaatcccttcccattttgcccttcagca # ccaccgcccaccgccggaagacctcaacttcctgtaccccctcccccagcctcagcagcatcagccgcagacgcagccgcagccgcagccgcatcacc # tgccgaaaggtgaagcctttctgcagaatgcagctagtgtcgccgcccaagcgcccaaagaaagtgctccagctgcacccaaaagaagaggcggctcg # gggggtctaaacaaagtctgtggggtttcaactgaacttcaggctgttgttggcgagccaaccatgccaaggacacagattgtgaagcagctttgggc # atacattaggaaaaacaacctccaagatcctagtaacaagcgaaagataatttgtgatgatgccctccgcttggtgttcgagacagattctactgata # tgttcaagatgaataagttgcttgctaaacatatcattccgcttgaaccttcaagagaatccagtcaagctaaacggttgaaggtggatgttgagtct # gcaactgaaagtagtgaagccagtccatctcctgtaatgatatctgatgcacttgccacattttttggtactggagaaagggagatgctccaagaaga # ggccctaaggcgtgtttgggagtacataaaggtcaaccaattagaggatcctctaaattcaatggcaatactatgtgatgcaaagcttcgggagctct # ttggatgtgaaagtatttctgcactgggggggttcatgaatctcaaactcaatgcagttttgagggctagttggagcttcacttctcttgggatctcc # atcttctttcacattcagatactagtaactttcttatcactgttagttcaggctgtagttctgaagcttcagcctgaggtcctgagtgtctga] # protein sequence = [MVSDQDIAKGVETLLRQSEPNSFTSLNGVVKQLEAKLGLDLSHKAVFIRDQISFLLRSHPQPLPPKDHFALQQHPQFL # SPHPQIPSHFALQHHRPPPEDLNFLYPLPQPQQHQPQTQPQPQPHHLPKGEAFLQNAASVAAQAPKESAPAAPKRRGGSGGLNKVCGVSTELQAVVGE # PTMPRTQIVKQLWAYIRKNNLQDPSNKRKIICDDALRLVFETDSTDMFKMNKLLAKHIIPLEPSRESSQAKRLKVDVESATESSEASPSPVMISDALA # TFFGTGEREMLQEEALRRVWEYIKVNQLEDPLNSMAILCDAKLRELFGCESISALGGFMNLKLNAVLRASWSFTSLGISIFFHIQILVTFLSLLVQAV # VLKLQPEVLSV] # end gene g35 ### # start gene g36 NW_003724208.1 AUGUSTUS gene 205626 207093 0.15 - . g36 NW_003724208.1 AUGUSTUS transcript 205626 207093 0.15 - . g36.t1 NW_003724208.1 AUGUSTUS tts 205626 205626 . - . transcript_id "g36.t1"; gene_id "g36"; NW_003724208.1 AUGUSTUS exon 205626 207093 . - . transcript_id "g36.t1"; gene_id "g36"; NW_003724208.1 AUGUSTUS stop_codon 205809 205811 . - 0 transcript_id "g36.t1"; gene_id "g36"; NW_003724208.1 AUGUSTUS single 205809 206927 0.62 - 0 transcript_id "g36.t1"; gene_id "g36"; NW_003724208.1 AUGUSTUS CDS 205809 206927 0.62 - 0 transcript_id "g36.t1"; gene_id "g36"; NW_003724208.1 AUGUSTUS start_codon 206925 206927 . - 0 transcript_id "g36.t1"; gene_id "g36"; NW_003724208.1 AUGUSTUS tss 207093 207093 . - . transcript_id "g36.t1"; gene_id "g36"; # coding sequence = [atggagggcgagttcaacaacttcgtcatggtatgggtcttggccttcgtctctttttcctactgttacaccatggcca # agatcatccccagtggcagagccaggctcctcactatcatcccagttatggctctcttcttgttccttcctctcaggctcaatactctgcatcttggc # ggcacatttgctttcttcattgcctggttggccaacttcaagcttctcctttttgccttcggcgaaggccctttagcatccgacccatcaatctccct # cctccgtttcgcagccctggcttctctaccaatcaaaatccagcaaaatccacctcccaatgacccttacagagagaacccatctcttgaaaagccca # aaaagggacagaagtcacctctagtttctactgtaaagggtgttgttttggccgtggtgatcgttgcggctcacttcagcgaggatatgcatccaatt # gtttcattattcctcctgatcttccaaatgtacttgagcttggaattcattctagcattagttgcaaccctccctcgagttcttctgggcatggagct # cgctccacagttcaatgaaccctacctctccacctccctccaagacttctggggaagacgatggaacatcatggcttccagtatcctgcgccccaccg # tgtacttacccaccctccacgtctcggcgcggctcttcggccggaagtgggccccaattccggcggtcatggcaacattcattgtgtcggcggtgatg # cacgagctgatattctactacatggggaggacggcgcccacctggcacatcagcttcttctttgtcctccacggcctctgtttgacgttcgagctcgc # tctgaagaaggttctcggcggaattctggcccttccggcatttgtctctggtccgttgacggtcgccttcgtggtgtcaactggcttctggctcttct # tccctcagctcctccgccttaaggccgacgtgagagcgattgaggagtacgccgcttttgtcgcgtttctcaaggatattggtcgggctttgacattc # aaccttatcagaggttatcaaagtgccacgtatgaatcttttgttcatgattatccatga] # protein sequence = [MEGEFNNFVMVWVLAFVSFSYCYTMAKIIPSGRARLLTIIPVMALFLFLPLRLNTLHLGGTFAFFIAWLANFKLLLFA # FGEGPLASDPSISLLRFAALASLPIKIQQNPPPNDPYRENPSLEKPKKGQKSPLVSTVKGVVLAVVIVAAHFSEDMHPIVSLFLLIFQMYLSLEFILA # LVATLPRVLLGMELAPQFNEPYLSTSLQDFWGRRWNIMASSILRPTVYLPTLHVSARLFGRKWAPIPAVMATFIVSAVMHELIFYYMGRTAPTWHISF # FFVLHGLCLTFELALKKVLGGILALPAFVSGPLTVAFVVSTGFWLFFPQLLRLKADVRAIEEYAAFVAFLKDIGRALTFNLIRGYQSATYESFVHDYP] # end gene g36 ### # start gene g37 NW_003724208.1 AUGUSTUS gene 210348 214473 0.02 + . g37 NW_003724208.1 AUGUSTUS transcript 210348 214473 0.02 + . g37.t1 NW_003724208.1 AUGUSTUS tss 210348 210348 . + . transcript_id "g37.t1"; gene_id "g37"; NW_003724208.1 AUGUSTUS exon 210348 210626 . + . transcript_id "g37.t1"; gene_id "g37"; NW_003724208.1 AUGUSTUS exon 212341 212388 . + . transcript_id "g37.t1"; gene_id "g37"; NW_003724208.1 AUGUSTUS exon 213543 214473 . + . transcript_id "g37.t1"; gene_id "g37"; NW_003724208.1 AUGUSTUS start_codon 213991 213993 . + 0 transcript_id "g37.t1"; gene_id "g37"; NW_003724208.1 AUGUSTUS single 213991 214305 0.49 + 0 transcript_id "g37.t1"; gene_id "g37"; NW_003724208.1 AUGUSTUS CDS 213991 214305 0.49 + 0 transcript_id "g37.t1"; gene_id "g37"; NW_003724208.1 AUGUSTUS stop_codon 214303 214305 . + 0 transcript_id "g37.t1"; gene_id "g37"; NW_003724208.1 AUGUSTUS tts 214473 214473 . + . transcript_id "g37.t1"; gene_id "g37"; # coding sequence = [atggcaaagatggagaagaacaagcagctctctacaatggctgcagtgctgatgttgcagctggtgttttggctgacga # tctcaccagcactgagctgcccgtcagatggcagcgagtgtaaggactgcatcgttaatcagatgaggaacgtttgcccatcatgcgcacctgttcta # agctgcatggcacgatgcttgtggggtggcgcatcgaaatctaagtgtgttaagaggtgtgattgttatgggggaaagccaaggctctcggattgcaa # gaaatgcatgtcaaggtgcaaatgcagctgtgaggcgtag] # protein sequence = [MAKMEKNKQLSTMAAVLMLQLVFWLTISPALSCPSDGSECKDCIVNQMRNVCPSCAPVLSCMARCLWGGASKSKCVKR # CDCYGGKPRLSDCKKCMSRCKCSCEA] # end gene g37 ### # start gene g38 NW_003724208.1 AUGUSTUS gene 214558 218443 0.21 - . g38 NW_003724208.1 AUGUSTUS transcript 214558 218443 0.21 - . g38.t1 NW_003724208.1 AUGUSTUS tts 214558 214558 . - . transcript_id "g38.t1"; gene_id "g38"; NW_003724208.1 AUGUSTUS exon 214558 215340 . - . transcript_id "g38.t1"; gene_id "g38"; NW_003724208.1 AUGUSTUS stop_codon 214911 214913 . - 0 transcript_id "g38.t1"; gene_id "g38"; NW_003724208.1 AUGUSTUS terminal 214911 215340 0.98 - 1 transcript_id "g38.t1"; gene_id "g38"; NW_003724208.1 AUGUSTUS internal 215764 215975 0.97 - 0 transcript_id "g38.t1"; gene_id "g38"; NW_003724208.1 AUGUSTUS internal 216608 216730 1 - 0 transcript_id "g38.t1"; gene_id "g38"; NW_003724208.1 AUGUSTUS internal 217103 217300 1 - 0 transcript_id "g38.t1"; gene_id "g38"; NW_003724208.1 AUGUSTUS initial 217951 218337 0.89 - 0 transcript_id "g38.t1"; gene_id "g38"; NW_003724208.1 AUGUSTUS intron 215341 215763 0.98 - . transcript_id "g38.t1"; gene_id "g38"; NW_003724208.1 AUGUSTUS intron 215976 216607 0.85 - . transcript_id "g38.t1"; gene_id "g38"; NW_003724208.1 AUGUSTUS intron 216731 217102 1 - . transcript_id "g38.t1"; gene_id "g38"; NW_003724208.1 AUGUSTUS intron 217301 217950 0.77 - . transcript_id "g38.t1"; gene_id "g38"; NW_003724208.1 AUGUSTUS CDS 214911 215340 0.98 - 1 transcript_id "g38.t1"; gene_id "g38"; NW_003724208.1 AUGUSTUS CDS 215764 215975 0.97 - 0 transcript_id "g38.t1"; gene_id "g38"; NW_003724208.1 AUGUSTUS exon 215764 215975 . - . transcript_id "g38.t1"; gene_id "g38"; NW_003724208.1 AUGUSTUS CDS 216608 216730 1 - 0 transcript_id "g38.t1"; gene_id "g38"; NW_003724208.1 AUGUSTUS exon 216608 216730 . - . transcript_id "g38.t1"; gene_id "g38"; NW_003724208.1 AUGUSTUS CDS 217103 217300 1 - 0 transcript_id "g38.t1"; gene_id "g38"; NW_003724208.1 AUGUSTUS exon 217103 217300 . - . transcript_id "g38.t1"; gene_id "g38"; NW_003724208.1 AUGUSTUS CDS 217951 218337 0.89 - 0 transcript_id "g38.t1"; gene_id "g38"; NW_003724208.1 AUGUSTUS exon 217951 218443 . - . transcript_id "g38.t1"; gene_id "g38"; NW_003724208.1 AUGUSTUS start_codon 218335 218337 . - 0 transcript_id "g38.t1"; gene_id "g38"; NW_003724208.1 AUGUSTUS tss 218443 218443 . - . transcript_id "g38.t1"; gene_id "g38"; # coding sequence = [atggagggagaatggaagcagaagaggctgtatcctttgctcggaactctctctattctcctttttctctacttcaact # tctccgactacttcaattttcctgtgctgtggctccctgccataggcttcgtggggacgaactccaccaagttcgtcattgtcgaacctgatggctct # caccagtccacgctctacatcaacggctggaactcctactggttgatggaggagagcgtctgggccccttcgagatctagggtttcaaatatgctcag # aagaggagctgagatgggtatgagcgtttgtcgaacttgggctttcaatgatggagatggccccaattctcttcagatatcacctggagtcttcaatg # aaagagtgtttcagggcttagactatgtgatagttgaagctaggaggcaccaagtcagattgatcctcagtctagtcaataatctgaatgcctacggt # ggtaaagcacagtatgtgaggtgggcacaagaagctggaatcaatgtctcttcctcaactgattcgtttttttcacacccaaccataaaagattacta # caaagcttacatcaaggctgttgtgacaagaaagaattccttgagtggagttaaatattctgaggaaccagctatatttgcatgggagctcatgaatg # agcctcggtgtgcatcaagttcttctgctcctattctgcaggcttggatcacagaaatggctgcatatatcaagagtttggaccaaaagcaccttgtc # actgttgggcttgagggattttatggtctgaaaacgactgaaagatctggagtgaatcctggggattgggcatctaagcttggatcagactttataca # aaactcagcaattgatgatattgattttgcttcagttcatgcatatcctgacagctggctcccagatgctgatttggaagagaaagcaaattttcttt # cacattgggtggattctcacataagtgatggggaatatgtcctgaagaaaccagttcttttcacagaagttggctccattatgcataggaagaaacaa # ggattatatgatacagatactttcttgaagacagtttacgataaaatttatgagtctgcaaagaagaggcaagcaggagcaggagccttgatctggca # gttactagttgaagggatggaggaatatagcgaccaattttccattgttgcatgggattatccctccacccatgaactgataatagaacagtcatgta # ggcttcggagcgtttttgcagaaggccaagtggaaaggaaacttcaacatggtgatctctgctttggtaaagtatttaacaacagcaatgagtaa] # protein sequence = [MEGEWKQKRLYPLLGTLSILLFLYFNFSDYFNFPVLWLPAIGFVGTNSTKFVIVEPDGSHQSTLYINGWNSYWLMEES # VWAPSRSRVSNMLRRGAEMGMSVCRTWAFNDGDGPNSLQISPGVFNERVFQGLDYVIVEARRHQVRLILSLVNNLNAYGGKAQYVRWAQEAGINVSSS # TDSFFSHPTIKDYYKAYIKAVVTRKNSLSGVKYSEEPAIFAWELMNEPRCASSSSAPILQAWITEMAAYIKSLDQKHLVTVGLEGFYGLKTTERSGVN # PGDWASKLGSDFIQNSAIDDIDFASVHAYPDSWLPDADLEEKANFLSHWVDSHISDGEYVLKKPVLFTEVGSIMHRKKQGLYDTDTFLKTVYDKIYES # AKKRQAGAGALIWQLLVEGMEEYSDQFSIVAWDYPSTHELIIEQSCRLRSVFAEGQVERKLQHGDLCFGKVFNNSNE] # end gene g38 ### # start gene g39 NW_003724208.1 AUGUSTUS gene 219005 219923 0.09 - . g39 NW_003724208.1 AUGUSTUS transcript 219005 219923 0.09 - . g39.t1 NW_003724208.1 AUGUSTUS tts 219005 219005 . - . transcript_id "g39.t1"; gene_id "g39"; NW_003724208.1 AUGUSTUS exon 219005 219923 . - . transcript_id "g39.t1"; gene_id "g39"; NW_003724208.1 AUGUSTUS stop_codon 219169 219171 . - 0 transcript_id "g39.t1"; gene_id "g39"; NW_003724208.1 AUGUSTUS single 219169 219822 0.87 - 0 transcript_id "g39.t1"; gene_id "g39"; NW_003724208.1 AUGUSTUS CDS 219169 219822 0.87 - 0 transcript_id "g39.t1"; gene_id "g39"; NW_003724208.1 AUGUSTUS start_codon 219820 219822 . - 0 transcript_id "g39.t1"; gene_id "g39"; NW_003724208.1 AUGUSTUS tss 219923 219923 . - . transcript_id "g39.t1"; gene_id "g39"; # coding sequence = [atgaaaccctctcgtagattcagcttcttctcctcctcctcctcttcctcttcctctacaaccaccactacagtgatat # acactttccgtgacgaccaaactacccctcatccccaattcaatgaaattcccatccattcctcacccgaaccccccatccccatcaccgtccacctc # cctcaaccgtcggaatccgccgccgccgtagccatccaatcggcctaccgcgcccacctgatccgcactcttgtccggaaaatctccgccgtgagctc # cgaggccgaccacctgcagcgcctaatccagcggcaggaaaccgtggacgccatccggagcgacgatcgcgagaagctgaagatgaacgaggccttga # tggctctgctcctgaagctcgactccgtgccggggcttgatccggcagtgcgggacctccggaggtccgtgagccgtcggatcgttgggatgcaggag # attctagactcggtttccgacaccagaacggacggatgggatggattcttgaggaattgggacaaggccatagatgagatggaagaagaagtttgtaa # agagagaggcggggatgaaatggagaggttttgtgcagagcatttagggttccggtgcctccagaggtttctccgagaggcatag] # protein sequence = [MKPSRRFSFFSSSSSSSSSTTTTTVIYTFRDDQTTPHPQFNEIPIHSSPEPPIPITVHLPQPSESAAAVAIQSAYRAH # LIRTLVRKISAVSSEADHLQRLIQRQETVDAIRSDDREKLKMNEALMALLLKLDSVPGLDPAVRDLRRSVSRRIVGMQEILDSVSDTRTDGWDGFLRN # WDKAIDEMEEEVCKERGGDEMERFCAEHLGFRCLQRFLREA] # end gene g39 ### # start gene g40 NW_003724208.1 AUGUSTUS gene 220227 224103 0.03 - . g40 NW_003724208.1 AUGUSTUS transcript 220227 224103 0.03 - . g40.t1 NW_003724208.1 AUGUSTUS tts 220227 220227 . - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS exon 220227 220507 . - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS stop_codon 220445 220447 . - 0 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS terminal 220445 220507 0.51 - 0 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS internal 221095 221220 0.72 - 0 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS internal 221363 221459 0.98 - 1 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS internal 221961 222025 0.98 - 0 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS internal 222261 222323 1 - 0 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS internal 222454 222524 1 - 2 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS internal 222621 222680 0.99 - 2 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS internal 222766 222865 1 - 0 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS internal 223036 223108 1 - 1 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS internal 223618 223692 0.99 - 1 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS internal 223806 223930 0.53 - 0 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS initial 224016 224018 0.55 - 0 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS intron 220508 221094 0.45 - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS intron 221221 221362 0.73 - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS intron 221460 221960 0.89 - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS intron 222026 222260 0.98 - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS intron 222324 222453 1 - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS intron 222525 222620 0.99 - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS intron 222681 222765 0.99 - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS intron 222866 223035 1 - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS intron 223109 223617 0.98 - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS intron 223693 223805 0.98 - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS intron 223931 224015 0.54 - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS CDS 220445 220507 0.51 - 0 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS CDS 221095 221220 0.72 - 0 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS exon 221095 221220 . - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS CDS 221363 221459 0.98 - 1 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS exon 221363 221459 . - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS CDS 221961 222025 0.98 - 0 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS exon 221961 222025 . - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS CDS 222261 222323 1 - 0 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS exon 222261 222323 . - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS CDS 222454 222524 1 - 2 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS exon 222454 222524 . - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS CDS 222621 222680 0.99 - 2 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS exon 222621 222680 . - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS CDS 222766 222865 1 - 0 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS exon 222766 222865 . - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS CDS 223036 223108 1 - 1 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS exon 223036 223108 . - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS CDS 223618 223692 0.99 - 1 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS exon 223618 223692 . - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS CDS 223806 223930 0.53 - 0 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS exon 223806 223930 . - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS CDS 224016 224018 0.55 - 0 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS exon 224016 224103 . - . transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS start_codon 224016 224018 . - 0 transcript_id "g40.t1"; gene_id "g40"; NW_003724208.1 AUGUSTUS tss 224103 224103 . - . transcript_id "g40.t1"; gene_id "g40"; # coding sequence = [atgaacaaggtagaaatgtgtcttcctatggtgataggggactattcagacttcttttcgtccatgcatcatgcaagga # actgtgggagcatatttcgtggaccagaggacccgattggagcaaactggttccaccttcctattgcttatcatgggcgggcatcgtctattgttata # tctggaactgatcttattcggccaaaaggccaaggtcatccaattggcaattcaccatattttggaccttcaagaaagctagactttgagctagaaat # ggctgctatagttggtcctggtaatgaattaggaaagcctgtggatgttaatgaggctgcagatcacatctttggacttgtgatcatgaatgactgga # gtgcaagagatattcaggcatgggaatatgtgcctcttgggccttttcttgggaagagttttggtacaacactatccccttggattgtgacccttgat # gctctagagccctttgcttgtgatgctccaaaacaggaccctcctcccttgccgtatctggctgaaaaaatatcccaaaactatgacatttccttaga # ggttgggattaaacctgctggacataaaaattcgtgcattgtcacaaggagtaacttaaagcacttatattggacactgactcaacaacttgcacacc # atacaatcaatggttgcaacttaaggccaggcgatctccttggaactggaaccataagtggacctgaaccggaatctttgggatgcttgctagaatta # acatggaatggacaaaagccagtatctttggatggaacaacccgtggatttcttgaagatggagatgaagtcactatcactggttattgcaagggcaa # tggttacaaagttgggttcggaacatgctcaggcaagattcttccatcatctccttga] # protein sequence = [MNKVEMCLPMVIGDYSDFFSSMHHARNCGSIFRGPEDPIGANWFHLPIAYHGRASSIVISGTDLIRPKGQGHPIGNSP # YFGPSRKLDFELEMAAIVGPGNELGKPVDVNEAADHIFGLVIMNDWSARDIQAWEYVPLGPFLGKSFGTTLSPWIVTLDALEPFACDAPKQDPPPLPY # LAEKISQNYDISLEVGIKPAGHKNSCIVTRSNLKHLYWTLTQQLAHHTINGCNLRPGDLLGTGTISGPEPESLGCLLELTWNGQKPVSLDGTTRGFLE # DGDEVTITGYCKGNGYKVGFGTCSGKILPSSP] # end gene g40 ### # start gene g41 NW_003724208.1 AUGUSTUS gene 250877 252283 0.28 - . g41 NW_003724208.1 AUGUSTUS transcript 250877 252283 0.28 - . g41.t1 NW_003724208.1 AUGUSTUS tts 250877 250877 . - . transcript_id "g41.t1"; gene_id "g41"; NW_003724208.1 AUGUSTUS exon 250877 252283 . - . transcript_id "g41.t1"; gene_id "g41"; NW_003724208.1 AUGUSTUS stop_codon 251060 251062 . - 0 transcript_id "g41.t1"; gene_id "g41"; NW_003724208.1 AUGUSTUS single 251060 252178 0.87 - 0 transcript_id "g41.t1"; gene_id "g41"; NW_003724208.1 AUGUSTUS CDS 251060 252178 0.87 - 0 transcript_id "g41.t1"; gene_id "g41"; NW_003724208.1 AUGUSTUS start_codon 252176 252178 . - 0 transcript_id "g41.t1"; gene_id "g41"; NW_003724208.1 AUGUSTUS tss 252283 252283 . - . transcript_id "g41.t1"; gene_id "g41"; # coding sequence = [atggagggcgagctcaacaacttcgtcatggtatgggtcttggccttcgtctctttttcctactgttacaccatggcca # agatcatccccagtggcagagccaggctcctcactatcatcccagttatggctttcttcttgttccttcctctcagactcaatactctgcatcttggc # ggcacatttgctttcttcattgcctggttggccaacttcaagcttctcctttttgccttcggcgaaggccctttagcatccgacccatcaatctccct # cctccgtttcgcagccctggcttctttaccaatcaaaatccagcaaaatccgcctcccaatggcccttacagagagaacccatctcttgaaaagccca # aaaagggacagaagtcgcctgtggtttatactgtaaagggtgtggttttggccatggtgatcgttgcggctcacttcagtgaggatatgcatccaatt # gtttcattattcctcctgctcttccaaatgtacttgagcttggaattcattctagcattagttgcaaccctccctcgagttcttctgggcatggagct # cgctccacagttcaatgaaccgtacctctccacctccctccaagacttctggggaagacgatggaacatcatggctaccagtatcctgcgccccaccg # tgtacttacccaccctccacgtctcggcgcggctcttcggccggaagtgggccccaattccggcggtcatggcaacattcattgtgtcggcggtgatg # cacgagctgatattctactacatggggaggacggcgcccacctggcacatcagcttcttcttcgtcctccacggcctctgtttgacggtcgagctcgc # tctgaagaaggttctcggcggaattccggcccttccggcatttgtctctggtccgttgacggtcgccttcgtggtgtcaactggcttctggctcttct # tccctcagctcctccgccttaaggccgacgtgagagcgattgaggagtacgccgcttttgtcgcgtttctcaaggatattggtcgggctttgacattc # aacctgatcagaggttatcaaagtgccacgtatgaatcttttgttcatgattatccatga] # protein sequence = [MEGELNNFVMVWVLAFVSFSYCYTMAKIIPSGRARLLTIIPVMAFFLFLPLRLNTLHLGGTFAFFIAWLANFKLLLFA # FGEGPLASDPSISLLRFAALASLPIKIQQNPPPNGPYRENPSLEKPKKGQKSPVVYTVKGVVLAMVIVAAHFSEDMHPIVSLFLLLFQMYLSLEFILA # LVATLPRVLLGMELAPQFNEPYLSTSLQDFWGRRWNIMATSILRPTVYLPTLHVSARLFGRKWAPIPAVMATFIVSAVMHELIFYYMGRTAPTWHISF # FFVLHGLCLTVELALKKVLGGIPALPAFVSGPLTVAFVVSTGFWLFFPQLLRLKADVRAIEEYAAFVAFLKDIGRALTFNLIRGYQSATYESFVHDYP] # end gene g41 ### # start gene g42 NW_003724208.1 AUGUSTUS gene 257058 258381 0.03 + . g42 NW_003724208.1 AUGUSTUS transcript 257058 258381 0.03 + . g42.t1 NW_003724208.1 AUGUSTUS tss 257058 257058 . + . transcript_id "g42.t1"; gene_id "g42"; NW_003724208.1 AUGUSTUS exon 257058 257427 . + . transcript_id "g42.t1"; gene_id "g42"; NW_003724208.1 AUGUSTUS start_codon 257278 257280 . + 0 transcript_id "g42.t1"; gene_id "g42"; NW_003724208.1 AUGUSTUS initial 257278 257427 0.74 + 0 transcript_id "g42.t1"; gene_id "g42"; NW_003724208.1 AUGUSTUS terminal 257544 257552 0.68 + 0 transcript_id "g42.t1"; gene_id "g42"; NW_003724208.1 AUGUSTUS intron 257428 257543 0.69 + . transcript_id "g42.t1"; gene_id "g42"; NW_003724208.1 AUGUSTUS CDS 257278 257427 0.74 + 0 transcript_id "g42.t1"; gene_id "g42"; NW_003724208.1 AUGUSTUS CDS 257544 257552 0.68 + 0 transcript_id "g42.t1"; gene_id "g42"; NW_003724208.1 AUGUSTUS exon 257544 258381 . + . transcript_id "g42.t1"; gene_id "g42"; NW_003724208.1 AUGUSTUS stop_codon 257550 257552 . + 0 transcript_id "g42.t1"; gene_id "g42"; NW_003724208.1 AUGUSTUS tts 258381 258381 . + . transcript_id "g42.t1"; gene_id "g42"; # coding sequence = [atgagacctgattcttctgttttgctgaggtgtcaagatcatagtggctcaaagccccaccctctaaatcagtacaagc # tgcgttataccgcagcagcacaacaaagaaagagaggacgaagcttcgcgatcggatcatcgaatcctcaaatcagataa] # protein sequence = [MRPDSSVLLRCQDHSGSKPHPLNQYKLRYTAAAQQRKRGRSFAIGSSNPQIR] # end gene g42 ### # start gene g43 NW_003724208.1 AUGUSTUS gene 260888 261483 0.06 + . g43 NW_003724208.1 AUGUSTUS transcript 260888 261483 0.06 + . g43.t1 NW_003724208.1 AUGUSTUS tss 260888 260888 . + . transcript_id "g43.t1"; gene_id "g43"; NW_003724208.1 AUGUSTUS exon 260888 261483 . + . transcript_id "g43.t1"; gene_id "g43"; NW_003724208.1 AUGUSTUS start_codon 261001 261003 . + 0 transcript_id "g43.t1"; gene_id "g43"; NW_003724208.1 AUGUSTUS single 261001 261315 0.6 + 0 transcript_id "g43.t1"; gene_id "g43"; NW_003724208.1 AUGUSTUS CDS 261001 261315 0.6 + 0 transcript_id "g43.t1"; gene_id "g43"; NW_003724208.1 AUGUSTUS stop_codon 261313 261315 . + 0 transcript_id "g43.t1"; gene_id "g43"; NW_003724208.1 AUGUSTUS tts 261483 261483 . + . transcript_id "g43.t1"; gene_id "g43"; # coding sequence = [atggcaaagatggagaagaacaagcagctctctacaatggctgcagtgctgatgttgctgctggtgttttggctgatga # tctcaccagcactgggctgcccgtcagatggcagcgagtgtaaggactgcatcgttaatcagatgaggaacggttgcccatcatgcgcacctgttcta # cgctgcatggcacgatgcttgtggggtggcacatcgaaatctaagtgtgttaagaggtgtgattgttatgggggaaagccaaggctctcggattgcaa # gaaatgcatgtcaaggtgcaaatgcagctgtgaggcgtag] # protein sequence = [MAKMEKNKQLSTMAAVLMLLLVFWLMISPALGCPSDGSECKDCIVNQMRNGCPSCAPVLRCMARCLWGGTSKSKCVKR # CDCYGGKPRLSDCKKCMSRCKCSCEA] # end gene g43 ### # start gene g44 NW_003724208.1 AUGUSTUS gene 261564 265403 0.36 - . g44 NW_003724208.1 AUGUSTUS transcript 261564 265403 0.36 - . g44.t1 NW_003724208.1 AUGUSTUS tts 261564 261564 . - . transcript_id "g44.t1"; gene_id "g44"; NW_003724208.1 AUGUSTUS exon 261564 262361 . - . transcript_id "g44.t1"; gene_id "g44"; NW_003724208.1 AUGUSTUS stop_codon 261926 261928 . - 0 transcript_id "g44.t1"; gene_id "g44"; NW_003724208.1 AUGUSTUS terminal 261926 262361 0.78 - 1 transcript_id "g44.t1"; gene_id "g44"; NW_003724208.1 AUGUSTUS internal 262785 262996 0.99 - 0 transcript_id "g44.t1"; gene_id "g44"; NW_003724208.1 AUGUSTUS internal 263629 263751 1 - 0 transcript_id "g44.t1"; gene_id "g44"; NW_003724208.1 AUGUSTUS internal 264124 264321 1 - 0 transcript_id "g44.t1"; gene_id "g44"; NW_003724208.1 AUGUSTUS initial 264908 265294 0.89 - 0 transcript_id "g44.t1"; gene_id "g44"; NW_003724208.1 AUGUSTUS intron 262362 262784 1 - . transcript_id "g44.t1"; gene_id "g44"; NW_003724208.1 AUGUSTUS intron 262997 263628 0.91 - . transcript_id "g44.t1"; gene_id "g44"; NW_003724208.1 AUGUSTUS intron 263752 264123 1 - . transcript_id "g44.t1"; gene_id "g44"; NW_003724208.1 AUGUSTUS intron 264322 264907 0.99 - . transcript_id "g44.t1"; gene_id "g44"; NW_003724208.1 AUGUSTUS CDS 261926 262361 0.78 - 1 transcript_id "g44.t1"; gene_id "g44"; NW_003724208.1 AUGUSTUS CDS 262785 262996 0.99 - 0 transcript_id "g44.t1"; gene_id "g44"; NW_003724208.1 AUGUSTUS exon 262785 262996 . - . transcript_id "g44.t1"; gene_id "g44"; NW_003724208.1 AUGUSTUS CDS 263629 263751 1 - 0 transcript_id "g44.t1"; gene_id "g44"; NW_003724208.1 AUGUSTUS exon 263629 263751 . - . transcript_id "g44.t1"; gene_id "g44"; NW_003724208.1 AUGUSTUS CDS 264124 264321 1 - 0 transcript_id "g44.t1"; gene_id "g44"; NW_003724208.1 AUGUSTUS exon 264124 264321 . - . transcript_id "g44.t1"; gene_id "g44"; NW_003724208.1 AUGUSTUS CDS 264908 265294 0.89 - 0 transcript_id "g44.t1"; gene_id "g44"; NW_003724208.1 AUGUSTUS exon 264908 265403 . - . transcript_id "g44.t1"; gene_id "g44"; NW_003724208.1 AUGUSTUS start_codon 265292 265294 . - 0 transcript_id "g44.t1"; gene_id "g44"; NW_003724208.1 AUGUSTUS tss 265403 265403 . - . transcript_id "g44.t1"; gene_id "g44"; # coding sequence = [atggagggagaatggaagcagaagaggctgtatcctttgctcggaactctctctattctcctttttctctacttcaact # tctccgactacttcaattttcctgtgctgtggctccctgccataggcttcgtggggacgaactccaccaagttcgtcattgtcgaacctgatggctct # caccagtccacgctctacatcaacggctggaactcctactggttgatggaggagagcgtctggggcccttcgagatctagggtttcaaatatgctcag # aagaggagctgagatgggtatgagcgtttgtcgaacttgggctttcaatgatggagatggccccaattctcttcagatatcacctggagtcttcaatg # aaagagtgtttcagggcttagactatgtgatatttgaagctaggaggcaccaagtcagattgatcctcagtctagtcaataatctgaatgcctacggt # ggtaaagcacagtatgtgaggtgggcacaagaagctggaatcaatgtctcttcctcaactgattcgtttttttcacacccaaccataaaagattacta # caaagcttacatcaaggctgttgtgacaagaaagaattccttgagtggagttaaatattctgaggaaccagctatatttggatgggagctcatgaatg # agcctcggtgtgcatcaagttcttctgctcctattctgcaggcttggatcacagaaatggctgcatttatcaagagtttggaccaaaagcaccttgtc # actgttgggcttgagggattttatggtctgaaaacgactgaaagatctggagtgaatcctggggattgggcatctaagcttggatcagactttataca # aaactcagcaattgatgatattgattttgcttcagttcatgcatatcctgacagctggctcccagatgctgatttggaagagaaagcaaattttcttt # cacattgggtggattctcacataagtgatggggaatatgtcctgaagaaaccagttcttttcacagaagttggctccattatgcataggaagaaacaa # ggattatatgatacagatactttcttgaagacagtttacgataaaatttatgagtctgcaaagaagaggcaagcaggagcaggagcaggagccttgat # ctggcagttactagttgaagggatggaggaatatagcgaccaattttccattgttgcatgggattatccctccacccatgaactgataattgaacagt # catgtaggcttcggagcgtttttgcagaaggccaagtggaaaggaaacttcaacatggtgatctctgctttggtaaagtatttaacaacagcaatgag # taa] # protein sequence = [MEGEWKQKRLYPLLGTLSILLFLYFNFSDYFNFPVLWLPAIGFVGTNSTKFVIVEPDGSHQSTLYINGWNSYWLMEES # VWGPSRSRVSNMLRRGAEMGMSVCRTWAFNDGDGPNSLQISPGVFNERVFQGLDYVIFEARRHQVRLILSLVNNLNAYGGKAQYVRWAQEAGINVSSS # TDSFFSHPTIKDYYKAYIKAVVTRKNSLSGVKYSEEPAIFGWELMNEPRCASSSSAPILQAWITEMAAFIKSLDQKHLVTVGLEGFYGLKTTERSGVN # PGDWASKLGSDFIQNSAIDDIDFASVHAYPDSWLPDADLEEKANFLSHWVDSHISDGEYVLKKPVLFTEVGSIMHRKKQGLYDTDTFLKTVYDKIYES # AKKRQAGAGAGALIWQLLVEGMEEYSDQFSIVAWDYPSTHELIIEQSCRLRSVFAEGQVERKLQHGDLCFGKVFNNSNE] # end gene g44 ### # start gene g45 NW_003724208.1 AUGUSTUS gene 265956 272143 0.13 - . g45 NW_003724208.1 AUGUSTUS transcript 267504 272143 0.03 - . g45.t1 NW_003724208.1 AUGUSTUS tts 267504 267504 . - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 267504 267897 . - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS stop_codon 267838 267840 . - 0 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS terminal 267838 267897 0.24 - 0 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 268106 268231 0.46 - 0 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 268374 268470 1 - 1 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 268970 269034 0.99 - 0 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 269270 269332 1 - 0 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 269463 269533 1 - 2 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 269630 269689 1 - 2 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 269775 269874 1 - 0 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 270045 270117 1 - 1 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 270611 270685 1 - 1 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 270799 270923 1 - 0 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 271009 271067 1 - 2 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 271252 271330 1 - 0 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS initial 271855 272058 1 - 0 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 267898 268105 0.24 - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 268232 268373 0.67 - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 268471 268969 0.97 - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 269035 269269 1 - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 269333 269462 1 - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 269534 269629 1 - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 269690 269774 1 - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 269875 270044 1 - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 270118 270610 1 - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 270686 270798 1 - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 270924 271008 1 - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 271068 271251 1 - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 271331 271854 1 - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 267838 267897 0.24 - 0 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 268106 268231 0.46 - 0 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 268106 268231 . - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 268374 268470 1 - 1 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 268374 268470 . - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 268970 269034 0.99 - 0 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 268970 269034 . - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 269270 269332 1 - 0 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 269270 269332 . - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 269463 269533 1 - 2 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 269463 269533 . - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 269630 269689 1 - 2 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 269630 269689 . - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 269775 269874 1 - 0 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 269775 269874 . - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 270045 270117 1 - 1 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 270045 270117 . - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 270611 270685 1 - 1 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 270611 270685 . - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 270799 270923 1 - 0 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 270799 270923 . - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 271009 271067 1 - 2 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 271009 271067 . - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 271252 271330 1 - 0 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 271252 271330 . - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 271855 272058 1 - 0 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 271855 272143 . - . transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS start_codon 272056 272058 . - 0 transcript_id "g45.t1"; gene_id "g45"; NW_003724208.1 AUGUSTUS tss 272143 272143 . - . transcript_id "g45.t1"; gene_id "g45"; # coding sequence = [atggctctccagtctttcgtcgaagttcaccctgactctcacttccccatccagaaccttccgtacggtgttttccggc # ctggaccgtctgcggaggctcggcctggcgtggcgatcggagactatgtgttggatctctcggtggttcagtccgccggtctgttcgacggtccgatt # gtcggaaaatccgattgtttcctgcagccgaatctcaacaagttcttgggaatgaggcggcctgcatggaaggaagctcgatcgacacttcaaaagct # gctgtcatctacagaaccaacactgcgtgacaatgcaagcttgagggaaaaagcacttgtaccaatgaacaaggtagaaatgtgtcttcctatggtga # taggggactattcagacttcttttcgtccatgcatcatgcaaggaactgtgggagcatatttcgtggaccagaggacccgattggagcaaactggttc # caccttcctattgcttatcatgggcgggcatcgtctattgttatatctggaactgatcttattcggccaaaaggccaaggtcatccaattggcaattc # accatattttggaccttcaagaaagctagactttgagctagaaatggctgctatagttggtcctggtaatgaattaggaaagcctgtggatgttaatg # aggctgcagatcatatctttggacttgtgatcatgaatgactggagtgcaagagatattcaggcatgggaatatgtgcctcttgggccttttcttggg # aagagttttggtacaacactatccccttggattgtgacccttgatgctctagagccctttgcttgtgatgctccaaaacaggaccctcctcccttgcc # gtatctggctgaaaaaatatcccaaaactatgacatttccttagaggttgggattaaacctgctggacataaaaattcgtgcattgtcacaaggagta # acttaaagcacttatattggacactgactcaacaacttgcacaccatacaatcaatggttgcaacttaaggccaggcgatctccttggaactggaacc # ataagtggacctgaaccggaatctttgggatgcttgctagaattaacatggaatggacaaaagccagtatctttggatggaacaacccgtggatttct # tgaagatggagatgaagtcactatcactggttattgcaagcttggtgatcaaataaagtctgtggtctccttcatggtctttctatatggaggcccat # ga] # protein sequence = [MALQSFVEVHPDSHFPIQNLPYGVFRPGPSAEARPGVAIGDYVLDLSVVQSAGLFDGPIVGKSDCFLQPNLNKFLGMR # RPAWKEARSTLQKLLSSTEPTLRDNASLREKALVPMNKVEMCLPMVIGDYSDFFSSMHHARNCGSIFRGPEDPIGANWFHLPIAYHGRASSIVISGTD # LIRPKGQGHPIGNSPYFGPSRKLDFELEMAAIVGPGNELGKPVDVNEAADHIFGLVIMNDWSARDIQAWEYVPLGPFLGKSFGTTLSPWIVTLDALEP # FACDAPKQDPPPLPYLAEKISQNYDISLEVGIKPAGHKNSCIVTRSNLKHLYWTLTQQLAHHTINGCNLRPGDLLGTGTISGPEPESLGCLLELTWNG # QKPVSLDGTTRGFLEDGDEVTITGYCKLGDQIKSVVSFMVFLYGGP] NW_003724208.1 AUGUSTUS transcript 267099 272133 0.02 - . g45.t2 NW_003724208.1 AUGUSTUS tts 267099 267099 . - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 267099 267488 . - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS stop_codon 267350 267352 . - 0 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS terminal 267350 267488 0.36 - 1 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 267616 267644 0.29 - 0 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 268106 268231 0.46 - 0 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 268374 268470 1 - 1 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 268970 269034 0.99 - 0 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 269270 269332 1 - 0 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 269463 269533 1 - 2 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 269630 269689 1 - 2 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 269775 269874 1 - 0 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 270045 270117 1 - 1 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 270611 270685 1 - 1 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 270799 270923 1 - 0 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 271009 271067 1 - 2 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 271252 271330 1 - 0 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS initial 271855 272058 1 - 0 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 267489 267615 0.52 - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 267645 268105 0.29 - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 268232 268373 0.67 - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 268471 268969 0.97 - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 269035 269269 1 - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 269333 269462 1 - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 269534 269629 1 - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 269690 269774 1 - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 269875 270044 1 - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 270118 270610 1 - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 270686 270798 1 - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 270924 271008 1 - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 271068 271251 1 - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 271331 271854 1 - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 267350 267488 0.36 - 1 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 267616 267644 0.29 - 0 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 267616 267644 . - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 268106 268231 0.46 - 0 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 268106 268231 . - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 268374 268470 1 - 1 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 268374 268470 . - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 268970 269034 0.99 - 0 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 268970 269034 . - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 269270 269332 1 - 0 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 269270 269332 . - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 269463 269533 1 - 2 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 269463 269533 . - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 269630 269689 1 - 2 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 269630 269689 . - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 269775 269874 1 - 0 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 269775 269874 . - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 270045 270117 1 - 1 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 270045 270117 . - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 270611 270685 1 - 1 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 270611 270685 . - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 270799 270923 1 - 0 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 270799 270923 . - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 271009 271067 1 - 2 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 271009 271067 . - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 271252 271330 1 - 0 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 271252 271330 . - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 271855 272058 1 - 0 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 271855 272133 . - . transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS start_codon 272056 272058 . - 0 transcript_id "g45.t2"; gene_id "g45"; NW_003724208.1 AUGUSTUS tss 272133 272133 . - . transcript_id "g45.t2"; gene_id "g45"; # coding sequence = [atggctctccagtctttcgtcgaagttcaccctgactctcacttccccatccagaaccttccgtacggtgttttccggc # ctggaccgtctgcggaggctcggcctggcgtggcgatcggagactatgtgttggatctctcggtggttcagtccgccggtctgttcgacggtccgatt # gtcggaaaatccgattgtttcctgcagccgaatctcaacaagttcttgggaatgaggcggcctgcatggaaggaagctcgatcgacacttcaaaagct # gctgtcatctacagaaccaacactgcgtgacaatgcaagcttgagggaaaaagcacttgtaccaatgaacaaggtagaaatgtgtcttcctatggtga # taggggactattcagacttcttttcgtccatgcatcatgcaaggaactgtgggagcatatttcgtggaccagaggacccgattggagcaaactggttc # caccttcctattgcttatcatgggcgggcatcgtctattgttatatctggaactgatcttattcggccaaaaggccaaggtcatccaattggcaattc # accatattttggaccttcaagaaagctagactttgagctagaaatggctgctatagttggtcctggtaatgaattaggaaagcctgtggatgttaatg # aggctgcagatcatatctttggacttgtgatcatgaatgactggagtgcaagagatattcaggcatgggaatatgtgcctcttgggccttttcttggg # aagagttttggtacaacactatccccttggattgtgacccttgatgctctagagccctttgcttgtgatgctccaaaacaggaccctcctcccttgcc # gtatctggctgaaaaaatatcccaaaactatgacatttccttagaggttgggattaaacctgctggacataaaaattcgtgcattgtcacaaggagta # acttaaagcacttatattggacactgactcaacaacttgcacaccatacaatcaatggttgcaacttaaggccaggcgatctccttggaactggaacc # ataagtggacctgaaccggaatctttgggatgcttgctagaattaacatggaatggacaaaagccagtatctttggatggaacaacccgtggatttct # tgaagatggagatgaagtcactatcactggttattgcaagagcaaaaccattaattctgaatctgtgcgggcaatggttacaaagttgggttcggaac # atgctcaggcaagattcttccatcatctccttgaggaaaatgttggccctggtgatcagaataagtgctcgtttctcactttacctcaaacttgggtt # gaacaattgtag] # protein sequence = [MALQSFVEVHPDSHFPIQNLPYGVFRPGPSAEARPGVAIGDYVLDLSVVQSAGLFDGPIVGKSDCFLQPNLNKFLGMR # RPAWKEARSTLQKLLSSTEPTLRDNASLREKALVPMNKVEMCLPMVIGDYSDFFSSMHHARNCGSIFRGPEDPIGANWFHLPIAYHGRASSIVISGTD # LIRPKGQGHPIGNSPYFGPSRKLDFELEMAAIVGPGNELGKPVDVNEAADHIFGLVIMNDWSARDIQAWEYVPLGPFLGKSFGTTLSPWIVTLDALEP # FACDAPKQDPPPLPYLAEKISQNYDISLEVGIKPAGHKNSCIVTRSNLKHLYWTLTQQLAHHTINGCNLRPGDLLGTGTISGPEPESLGCLLELTWNG # QKPVSLDGTTRGFLEDGDEVTITGYCKSKTINSESVRAMVTKLGSEHAQARFFHHLLEENVGPGDQNKCSFLTLPQTWVEQL] NW_003724208.1 AUGUSTUS transcript 265956 272143 0.01 - . g45.t3 NW_003724208.1 AUGUSTUS tts 265956 265956 . - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 265956 266791 . - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS stop_codon 266146 266148 . - 0 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS terminal 266146 266791 0.12 - 1 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 267354 267488 0.07 - 1 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 267616 267644 0.29 - 0 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 268106 268231 0.46 - 0 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 268374 268470 1 - 1 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 268970 269034 0.99 - 0 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 269270 269332 1 - 0 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 269463 269533 1 - 2 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 269630 269689 1 - 2 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 269775 269874 1 - 0 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 270045 270117 1 - 1 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 270611 270685 1 - 1 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 270799 270923 1 - 0 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 271009 271067 1 - 2 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS internal 271252 271330 1 - 0 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS initial 271855 272058 1 - 0 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 266792 267353 0.05 - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 267489 267615 0.52 - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 267645 268105 0.29 - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 268232 268373 0.67 - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 268471 268969 0.97 - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 269035 269269 1 - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 269333 269462 1 - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 269534 269629 1 - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 269690 269774 1 - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 269875 270044 1 - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 270118 270610 1 - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 270686 270798 1 - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 270924 271008 1 - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 271068 271251 1 - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS intron 271331 271854 1 - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 266146 266791 0.12 - 1 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 267354 267488 0.07 - 1 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 267354 267488 . - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 267616 267644 0.29 - 0 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 267616 267644 . - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 268106 268231 0.46 - 0 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 268106 268231 . - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 268374 268470 1 - 1 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 268374 268470 . - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 268970 269034 0.99 - 0 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 268970 269034 . - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 269270 269332 1 - 0 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 269270 269332 . - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 269463 269533 1 - 2 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 269463 269533 . - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 269630 269689 1 - 2 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 269630 269689 . - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 269775 269874 1 - 0 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 269775 269874 . - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 270045 270117 1 - 1 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 270045 270117 . - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 270611 270685 1 - 1 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 270611 270685 . - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 270799 270923 1 - 0 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 270799 270923 . - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 271009 271067 1 - 2 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 271009 271067 . - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 271252 271330 1 - 0 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 271252 271330 . - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 271855 272058 1 - 0 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 271855 272143 . - . transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS start_codon 272056 272058 . - 0 transcript_id "g45.t3"; gene_id "g45"; NW_003724208.1 AUGUSTUS tss 272143 272143 . - . transcript_id "g45.t3"; gene_id "g45"; # coding sequence = [atggctctccagtctttcgtcgaagttcaccctgactctcacttccccatccagaaccttccgtacggtgttttccggc # ctggaccgtctgcggaggctcggcctggcgtggcgatcggagactatgtgttggatctctcggtggttcagtccgccggtctgttcgacggtccgatt # gtcggaaaatccgattgtttcctgcagccgaatctcaacaagttcttgggaatgaggcggcctgcatggaaggaagctcgatcgacacttcaaaagct # gctgtcatctacagaaccaacactgcgtgacaatgcaagcttgagggaaaaagcacttgtaccaatgaacaaggtagaaatgtgtcttcctatggtga # taggggactattcagacttcttttcgtccatgcatcatgcaaggaactgtgggagcatatttcgtggaccagaggacccgattggagcaaactggttc # caccttcctattgcttatcatgggcgggcatcgtctattgttatatctggaactgatcttattcggccaaaaggccaaggtcatccaattggcaattc # accatattttggaccttcaagaaagctagactttgagctagaaatggctgctatagttggtcctggtaatgaattaggaaagcctgtggatgttaatg # aggctgcagatcatatctttggacttgtgatcatgaatgactggagtgcaagagatattcaggcatgggaatatgtgcctcttgggccttttcttggg # aagagttttggtacaacactatccccttggattgtgacccttgatgctctagagccctttgcttgtgatgctccaaaacaggaccctcctcccttgcc # gtatctggctgaaaaaatatcccaaaactatgacatttccttagaggttgggattaaacctgctggacataaaaattcgtgcattgtcacaaggagta # acttaaagcacttatattggacactgactcaacaacttgcacaccatacaatcaatggttgcaacttaaggccaggcgatctccttggaactggaacc # ataagtggacctgaaccggaatctttgggatgcttgctagaattaacatggaatggacaaaagccagtatctttggatggaacaacccgtggatttct # tgaagatggagatgaagtcactatcactggttattgcaagagcaaaaccattaattctgaatctgtgcgggcaatggttacaaagttgggttcggaac # atgctcaggcaagattcttccatcatctccttgaggaaaatgttggccctggtgatcagaataagtgctcgtttctcactttacctcaaacttgggtt # gaacaattattcagcttcttctcctcctcctcctcctcctcctcctcctcttcctccataaccaccactacagtgatatacactttccgtgacgacca # aactacccctcatccccaatccaatgaaattcccatccattcctcacccgaaccccccatccccatcaccatccacctccctcaaccgtcggaatccg # ccgccgccgtagccatccaatccgcctaccgcgcccacctgatccgcactcttgtccggaaaatctccgccgtgagctccgaggccgaccacctgcag # cgcctaatccagcggcaggaaaccgtggacgccatccggagcgacgatcgcgagaagctgaagatgaacgaggccttgatggctctgctcctgaagct # cgactccgtgccggggcttgatccggcagtgcgggacctccggaggtccgtgagccgtcggatcgttgggatgcaggagattctagactcggtttccg # acatcagaacggacggatgggatggattcttgtggaattgggacaaggccatagatgagatggaagaagaagtttgtaaagagagaggcggggatgaa # atggagaggttttgtgcagagcatttagggttccggtgcctccagaggtttctccgagaggcatag] # protein sequence = [MALQSFVEVHPDSHFPIQNLPYGVFRPGPSAEARPGVAIGDYVLDLSVVQSAGLFDGPIVGKSDCFLQPNLNKFLGMR # RPAWKEARSTLQKLLSSTEPTLRDNASLREKALVPMNKVEMCLPMVIGDYSDFFSSMHHARNCGSIFRGPEDPIGANWFHLPIAYHGRASSIVISGTD # LIRPKGQGHPIGNSPYFGPSRKLDFELEMAAIVGPGNELGKPVDVNEAADHIFGLVIMNDWSARDIQAWEYVPLGPFLGKSFGTTLSPWIVTLDALEP # FACDAPKQDPPPLPYLAEKISQNYDISLEVGIKPAGHKNSCIVTRSNLKHLYWTLTQQLAHHTINGCNLRPGDLLGTGTISGPEPESLGCLLELTWNG # QKPVSLDGTTRGFLEDGDEVTITGYCKSKTINSESVRAMVTKLGSEHAQARFFHHLLEENVGPGDQNKCSFLTLPQTWVEQLFSFFSSSSSSSSSSSS # ITTTTVIYTFRDDQTTPHPQSNEIPIHSSPEPPIPITIHLPQPSESAAAVAIQSAYRAHLIRTLVRKISAVSSEADHLQRLIQRQETVDAIRSDDREK # LKMNEALMALLLKLDSVPGLDPAVRDLRRSVSRRIVGMQEILDSVSDIRTDGWDGFLWNWDKAIDEMEEEVCKERGGDEMERFCAEHLGFRCLQRFLR # EA] NW_003724208.1 AUGUSTUS transcript 265956 266923 0.07 - . g45.t4 NW_003724208.1 AUGUSTUS tts 265956 265956 . - . transcript_id "g45.t4"; gene_id "g45"; NW_003724208.1 AUGUSTUS exon 265956 266923 . - . transcript_id "g45.t4"; gene_id "g45"; NW_003724208.1 AUGUSTUS stop_codon 266146 266148 . - 0 transcript_id "g45.t4"; gene_id "g45"; NW_003724208.1 AUGUSTUS single 266146 266808 0.73 - 0 transcript_id "g45.t4"; gene_id "g45"; NW_003724208.1 AUGUSTUS CDS 266146 266808 0.73 - 0 transcript_id "g45.t4"; gene_id "g45"; NW_003724208.1 AUGUSTUS start_codon 266806 266808 . - 0 transcript_id "g45.t4"; gene_id "g45"; NW_003724208.1 AUGUSTUS tss 266923 266923 . - . transcript_id "g45.t4"; gene_id "g45"; # coding sequence = [atgaaaccctctcgcagattcagcttcttctcctcctcctcctcctcctcctcctcctcttcctccataaccaccacta # cagtgatatacactttccgtgacgaccaaactacccctcatccccaatccaatgaaattcccatccattcctcacccgaaccccccatccccatcacc # atccacctccctcaaccgtcggaatccgccgccgccgtagccatccaatccgcctaccgcgcccacctgatccgcactcttgtccggaaaatctccgc # cgtgagctccgaggccgaccacctgcagcgcctaatccagcggcaggaaaccgtggacgccatccggagcgacgatcgcgagaagctgaagatgaacg # aggccttgatggctctgctcctgaagctcgactccgtgccggggcttgatccggcagtgcgggacctccggaggtccgtgagccgtcggatcgttggg # atgcaggagattctagactcggtttccgacatcagaacggacggatgggatggattcttgtggaattgggacaaggccatagatgagatggaagaaga # agtttgtaaagagagaggcggggatgaaatggagaggttttgtgcagagcatttagggttccggtgcctccagaggtttctccgagaggcatag] # protein sequence = [MKPSRRFSFFSSSSSSSSSSSSITTTTVIYTFRDDQTTPHPQSNEIPIHSSPEPPIPITIHLPQPSESAAAVAIQSAY # RAHLIRTLVRKISAVSSEADHLQRLIQRQETVDAIRSDDREKLKMNEALMALLLKLDSVPGLDPAVRDLRRSVSRRIVGMQEILDSVSDIRTDGWDGF # LWNWDKAIDEMEEEVCKERGGDEMERFCAEHLGFRCLQRFLREA] # end gene g45 ### # start gene g46 NW_003724208.1 AUGUSTUS gene 276808 278404 0.16 + . g46 NW_003724208.1 AUGUSTUS transcript 276808 278404 0.16 + . g46.t1 NW_003724208.1 AUGUSTUS tss 276808 276808 . + . transcript_id "g46.t1"; gene_id "g46"; NW_003724208.1 AUGUSTUS exon 276808 277130 . + . transcript_id "g46.t1"; gene_id "g46"; NW_003724208.1 AUGUSTUS start_codon 276992 276994 . + 0 transcript_id "g46.t1"; gene_id "g46"; NW_003724208.1 AUGUSTUS initial 276992 277130 0.66 + 0 transcript_id "g46.t1"; gene_id "g46"; NW_003724208.1 AUGUSTUS internal 277216 277279 0.86 + 2 transcript_id "g46.t1"; gene_id "g46"; NW_003724208.1 AUGUSTUS terminal 277368 277455 0.89 + 1 transcript_id "g46.t1"; gene_id "g46"; NW_003724208.1 AUGUSTUS intron 277131 277215 0.72 + . transcript_id "g46.t1"; gene_id "g46"; NW_003724208.1 AUGUSTUS intron 277280 277367 0.91 + . transcript_id "g46.t1"; gene_id "g46"; NW_003724208.1 AUGUSTUS CDS 276992 277130 0.66 + 0 transcript_id "g46.t1"; gene_id "g46"; NW_003724208.1 AUGUSTUS CDS 277216 277279 0.86 + 2 transcript_id "g46.t1"; gene_id "g46"; NW_003724208.1 AUGUSTUS exon 277216 277279 . + . transcript_id "g46.t1"; gene_id "g46"; NW_003724208.1 AUGUSTUS CDS 277368 277455 0.89 + 1 transcript_id "g46.t1"; gene_id "g46"; NW_003724208.1 AUGUSTUS exon 277368 277475 . + . transcript_id "g46.t1"; gene_id "g46"; NW_003724208.1 AUGUSTUS stop_codon 277453 277455 . + 0 transcript_id "g46.t1"; gene_id "g46"; NW_003724208.1 AUGUSTUS exon 278220 278404 . + . transcript_id "g46.t1"; gene_id "g46"; NW_003724208.1 AUGUSTUS tts 278404 278404 . + . transcript_id "g46.t1"; gene_id "g46"; # coding sequence = [atgggtattgttgatgccttgcgtctcgggtatcctcgcagttgccaactggacgtttgctttcaaccaaggatgattt # atggctcagtcaatcctacaaaagatgtcctgacagggtgtccggacacaccctccgatgtgtcagaagttttgcctccctttaatggtgggacaact # ttttggcttgtcatgatggcattgaggcggcggaatgcggactgtgataggctgtctgaggtgactcagcatggcctgcgttttatggccaaggatct # agacaacatatcctga] # protein sequence = [MGIVDALRLGYPRSCQLDVCFQPRMIYGSVNPTKDVLTGCPDTPSDVSEVLPPFNGGTTFWLVMMALRRRNADCDRLS # EVTQHGLRFMAKDLDNIS] # end gene g46 ### # start gene g47 NW_003724208.1 AUGUSTUS gene 279368 280429 0.03 + . g47 NW_003724208.1 AUGUSTUS transcript 279368 280429 0.03 + . g47.t1 NW_003724208.1 AUGUSTUS tss 279368 279368 . + . transcript_id "g47.t1"; gene_id "g47"; NW_003724208.1 AUGUSTUS exon 279368 279708 . + . transcript_id "g47.t1"; gene_id "g47"; NW_003724208.1 AUGUSTUS start_codon 279538 279540 . + 0 transcript_id "g47.t1"; gene_id "g47"; NW_003724208.1 AUGUSTUS initial 279538 279708 0.66 + 0 transcript_id "g47.t1"; gene_id "g47"; NW_003724208.1 AUGUSTUS internal 279936 280094 0.82 + 0 transcript_id "g47.t1"; gene_id "g47"; NW_003724208.1 AUGUSTUS terminal 280358 280378 0.62 + 0 transcript_id "g47.t1"; gene_id "g47"; NW_003724208.1 AUGUSTUS intron 279709 279935 0.66 + . transcript_id "g47.t1"; gene_id "g47"; NW_003724208.1 AUGUSTUS intron 280095 280357 0.58 + . transcript_id "g47.t1"; gene_id "g47"; NW_003724208.1 AUGUSTUS CDS 279538 279708 0.66 + 0 transcript_id "g47.t1"; gene_id "g47"; NW_003724208.1 AUGUSTUS CDS 279936 280094 0.82 + 0 transcript_id "g47.t1"; gene_id "g47"; NW_003724208.1 AUGUSTUS exon 279936 280094 . + . transcript_id "g47.t1"; gene_id "g47"; NW_003724208.1 AUGUSTUS CDS 280358 280378 0.62 + 0 transcript_id "g47.t1"; gene_id "g47"; NW_003724208.1 AUGUSTUS exon 280358 280429 . + . transcript_id "g47.t1"; gene_id "g47"; NW_003724208.1 AUGUSTUS stop_codon 280376 280378 . + 0 transcript_id "g47.t1"; gene_id "g47"; NW_003724208.1 AUGUSTUS tts 280429 280429 . + . transcript_id "g47.t1"; gene_id "g47"; # coding sequence = [atgtcgtttgatctgatgttgaagccctcatgcagcggctgtggatccaccacggatttgtacggaagcaactgcaagc # acatgactctctgcttgtcgtgtggcaaaaccatggcagagaaccacgggaaatgctacgactgtggcacccctgtcactcgattgattagggaatac # aatgttcggacgaattccagcggcgataagaattacttcattggtaggtttgtgactggtttgccgggtttttcaaagaagaaaaatgctgataataa # atggtctctgcataaagaggggcttcaaggacgccaagtttctgatgctttgcggtgtcttcttttacatgcctaa] # protein sequence = [MSFDLMLKPSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYDCGTPVTRLIREYNVRTNSSGDKNYFIGRFVT # GLPGFSKKKNADNKWSLHKEGLQGRQVSDALRCLLLHA] # end gene g47 ### # start gene g48 NW_003724208.1 AUGUSTUS gene 284102 289463 0.02 - . g48 NW_003724208.1 AUGUSTUS transcript 284102 289463 0.01 - . g48.t1 NW_003724208.1 AUGUSTUS tts 284102 284102 . - . transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 284102 284969 . - . transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS stop_codon 284571 284573 . - 0 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS terminal 284571 284969 0.45 - 0 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS internal 285054 285202 0.47 - 2 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS internal 285314 285412 0.58 - 2 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS internal 285524 286647 0.69 - 1 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS internal 286817 286972 0.47 - 1 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS internal 287077 287160 0.48 - 1 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS internal 287262 287439 0.47 - 2 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS internal 287599 287752 0.76 - 0 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS internal 287884 288341 0.62 - 2 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS internal 288422 288666 0.73 - 1 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS initial 288768 288955 0.58 - 0 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS intron 284970 285053 0.5 - . transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS intron 285203 285313 0.67 - . transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS intron 285413 285523 0.75 - . transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS intron 286648 286816 0.81 - . transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS intron 286973 287076 0.48 - . transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS intron 287161 287261 0.49 - . transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS intron 287440 287598 0.78 - . transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS intron 287753 287883 0.86 - . transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS intron 288342 288421 0.63 - . transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS intron 288667 288767 0.73 - . transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS CDS 284571 284969 0.45 - 0 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS CDS 285054 285202 0.47 - 2 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 285054 285202 . - . transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS CDS 285314 285412 0.58 - 2 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 285314 285412 . - . transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS CDS 285524 286647 0.69 - 1 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 285524 286647 . - . transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS CDS 286817 286972 0.47 - 1 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 286817 286972 . - . transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS CDS 287077 287160 0.48 - 1 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 287077 287160 . - . transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS CDS 287262 287439 0.47 - 2 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 287262 287439 . - . transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS CDS 287599 287752 0.76 - 0 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 287599 287752 . - . transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS CDS 287884 288341 0.62 - 2 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 287884 288341 . - . transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS CDS 288422 288666 0.73 - 1 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 288422 288666 . - . transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS CDS 288768 288955 0.58 - 0 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 288768 289180 . - . transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS start_codon 288953 288955 . - 0 transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 289347 289463 . - . transcript_id "g48.t1"; gene_id "g48"; NW_003724208.1 AUGUSTUS tss 289463 289463 . - . transcript_id "g48.t1"; gene_id "g48"; # coding sequence = [atgggcaacgagcgagaggttagggatgaaggaaaaggagactcacgcgttggtttcaaaatggcgaatgtacagacgc # atggagaacctgcaaaagtggacgtgccgtgtgaaaatggtgaaaggggatgcagaaaggcagctgcgttctctgaagcgatgtcggaaaaagtagca # gatggtgacaggcccgcggaggagggccaagtgactgaaggccacaaagaattaatggaaatgggccggcccaagtctttaccctataaaggccctga # ggtggtgatggaacgatccattgaggctagggctcccgacaggggactgggcgtcagtggagagcttgagagggaaatgataggctctcagatggggt # cgcgttcaccggccgtcaatctcacagagttcaccaacgaagccttgctggaggatccaaatggggaaagtgtagccatggctggggtcttcaatcag # agcagtagctcgaatgaagttgggggagcagttatgggtcctttaaggatgatatgggcggatgggagggaggccgaggtattgcaaatggcgggtag # ggaagcaggggttttcggagagaaatcagagggggttacggataggatcctccatgaggatatggaggagagggaagaagagggggaaccttgttggc # aatctagtagtttggctaagtttagccgctatattggaatgccgacggagggattcgaaagggaaattttgttattactgaaaagaatgaaagaaagg # aagattcagaaaggaaaattagaccgcaaaaaaaggaaaaaattgaagtcgtcaaaatttgaaagagaattgagaaaattggaatggatagtgaacta # tattggagaagaaggaggagaagaaggggaaactaagatccaagacatgtcaaagggtattattcgcagcctaggggtgggaagatatcttgactggg # gggcagtggattcaagaggggcagttggtggtatagtggtgttttgggacaacagagtattggacttggttgatattcaaaaaggggattttaatgcc # atcctaagtcctaaagagcgcaacagaggggggagcctgaattcgaacatgagaaggttcttagaaattatagaagacttagagttaaaggatgtgcc # tttagtcgggggcccttttacttggaacggaggggtgaataatcagaccttcttaaggctggatagggggtgtgagaagaggcccttcccttttagat # ttgaaaacatgtggttgaaagtggaaggtgttaaggagcttatgaagtcttggattgagctcagaaaaaatgcggcgttggagcaggtgcagttttgg # gatgcaaaggagaaaattagcagactgaatttggaagagctggaagctagggaagattataaaaaatgggttttacttgaagaaatcaattggggcaa # aaatctagggaattcgggggattggcgtccttctatatccgggctgcagttagagactctggatcagttggatgctagtactttggagagcccgttca # cggaagaggaggtgttcaatgccttgttgagttgcaatggggataaagctccggggccagatggattctctatggctttctggcaatttgcttgggat # ttcgtgaaggcggatgtgttgtgttttttcaaggagttctatgaaaatggaaaatttgttaaaagcctaaatgcaactttttttgtcttaattccaaa # aaaagtgggagctgaagacttgggggattttaggcctataagcttggtgggaagcttgtataagtggttggccaaggtcttagccaataggctaaaaa # aggtggttggaaaggtgatctccaaggctcaaggggcgtttgtggaaggaagacaaatcctagacgcaatgttgatagccaatgaagccattgattcg # actctgaaaaataatgagagtgtcatcttatgcaaattggatatagagaaggcttatgataatgtggattggacttttattctcacagttatgcagaa # aatgggttttggggagaaatggatcaggtggattaaatggtgcatctccactgcaagtttttctgtgttggtcaatggaacccctacaggttttttcc # aaagctcaaagggattaaggcagggtgatcccttttccccttatctctttgttatagcaatggaggtttttagcgtttttctcaaaagggctgtagag # ggaggctatttatcggggtgtagggtcaaggggaggagtgaagaaggggtccttatatcccatttgttgttcgccgatgatactctggtgttttgtaa # tccgtctcaagaccacttgacttatcttagttggttacttatgtggttcgaggccacttcgggattgagaataaatttggaaaaaagtgaactcattc # ctgtaggaagggtagagaatatggatgaccttgcttgggagtttggttgcaaagtgggtagcttgccgtccacatatttggggatgcccttgggggct # tctttcaaatcaacatcagtttgggatggagtggaagatcgattccgtaaaaggctagtcaaacggagattagaaaagattcaaagggacttcctttg # gggtgggggtaatttggagcgaaagcctcatctagtaagatgggaggtggtgtgcttaatgattagagggaaatatgaagaagagagagggggttggt # cctctcgggaagtgagagaggctcatggcttggggttgtggaaagggataaggatggattgggaattagtgagcaataggttggtcttcattgttggt # aatgggaggagggaagaaagtgtggcagatgtttgggactccttggcggaggggggatgggggggttggaatccatgctttttaagagctttcaatga # ttgggaggtagaggaagcgtcaagttttatggagcggttacatcgtaacagagttattgaggatgtggaggacatggtatcctggactgaaactaaga # gtggtaaattctcggttaaatctctatacttggcccttgaagcggggtgttcgactcggtttccttcaagccttatttggaatgagaatgtgcagccc # aagattagtttttttgcatgggaggctacgtggggcaaagcactaaccttggacaaggtgcaaaaaagaggatgggctttggcaaatagatgtttttt # gtgtcttgagaatgagtag] # protein sequence = [MGNEREVRDEGKGDSRVGFKMANVQTHGEPAKVDVPCENGERGCRKAAAFSEAMSEKVADGDRPAEEGQVTEGHKELM # EMGRPKSLPYKGPEVVMERSIEARAPDRGLGVSGELEREMIGSQMGSRSPAVNLTEFTNEALLEDPNGESVAMAGVFNQSSSSNEVGGAVMGPLRMIW # ADGREAEVLQMAGREAGVFGEKSEGVTDRILHEDMEEREEEGEPCWQSSSLAKFSRYIGMPTEGFEREILLLLKRMKERKIQKGKLDRKKRKKLKSSK # FERELRKLEWIVNYIGEEGGEEGETKIQDMSKGIIRSLGVGRYLDWGAVDSRGAVGGIVVFWDNRVLDLVDIQKGDFNAILSPKERNRGGSLNSNMRR # FLEIIEDLELKDVPLVGGPFTWNGGVNNQTFLRLDRGCEKRPFPFRFENMWLKVEGVKELMKSWIELRKNAALEQVQFWDAKEKISRLNLEELEARED # YKKWVLLEEINWGKNLGNSGDWRPSISGLQLETLDQLDASTLESPFTEEEVFNALLSCNGDKAPGPDGFSMAFWQFAWDFVKADVLCFFKEFYENGKF # VKSLNATFFVLIPKKVGAEDLGDFRPISLVGSLYKWLAKVLANRLKKVVGKVISKAQGAFVEGRQILDAMLIANEAIDSTLKNNESVILCKLDIEKAY # DNVDWTFILTVMQKMGFGEKWIRWIKWCISTASFSVLVNGTPTGFFQSSKGLRQGDPFSPYLFVIAMEVFSVFLKRAVEGGYLSGCRVKGRSEEGVLI # SHLLFADDTLVFCNPSQDHLTYLSWLLMWFEATSGLRINLEKSELIPVGRVENMDDLAWEFGCKVGSLPSTYLGMPLGASFKSTSVWDGVEDRFRKRL # VKRRLEKIQRDFLWGGGNLERKPHLVRWEVVCLMIRGKYEEERGGWSSREVREAHGLGLWKGIRMDWELVSNRLVFIVGNGRREESVADVWDSLAEGG # WGGWNPCFLRAFNDWEVEEASSFMERLHRNRVIEDVEDMVSWTETKSGKFSVKSLYLALEAGCSTRFPSSLIWNENVQPKISFFAWEATWGKALTLDK # VQKRGWALANRCFLCLENE] NW_003724208.1 AUGUSTUS transcript 284102 289313 0.01 - . g48.t2 NW_003724208.1 AUGUSTUS tts 284102 284102 . - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 284102 284969 . - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS stop_codon 284571 284573 . - 0 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS terminal 284571 284969 0.45 - 0 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS internal 285054 285202 0.47 - 2 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS internal 285314 285412 0.58 - 2 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS internal 285524 286647 0.69 - 1 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS internal 286817 286972 0.47 - 1 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS internal 287077 287160 0.48 - 1 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS internal 287262 287439 0.47 - 2 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS internal 287599 287752 0.76 - 0 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS internal 287884 288341 0.62 - 2 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS internal 288422 288666 0.73 - 1 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS internal 288768 288962 0.16 - 1 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS initial 289035 289204 0.16 - 0 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS intron 284970 285053 0.5 - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS intron 285203 285313 0.67 - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS intron 285413 285523 0.75 - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS intron 286648 286816 0.81 - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS intron 286973 287076 0.48 - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS intron 287161 287261 0.49 - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS intron 287440 287598 0.78 - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS intron 287753 287883 0.86 - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS intron 288342 288421 0.63 - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS intron 288667 288767 0.73 - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS intron 288963 289034 0.16 - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS CDS 284571 284969 0.45 - 0 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS CDS 285054 285202 0.47 - 2 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 285054 285202 . - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS CDS 285314 285412 0.58 - 2 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 285314 285412 . - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS CDS 285524 286647 0.69 - 1 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 285524 286647 . - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS CDS 286817 286972 0.47 - 1 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 286817 286972 . - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS CDS 287077 287160 0.48 - 1 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 287077 287160 . - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS CDS 287262 287439 0.47 - 2 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 287262 287439 . - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS CDS 287599 287752 0.76 - 0 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 287599 287752 . - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS CDS 287884 288341 0.62 - 2 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 287884 288341 . - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS CDS 288422 288666 0.73 - 1 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 288422 288666 . - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS CDS 288768 288962 0.16 - 1 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 288768 288962 . - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS CDS 289035 289204 0.16 - 0 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS exon 289035 289313 . - . transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS start_codon 289202 289204 . - 0 transcript_id "g48.t2"; gene_id "g48"; NW_003724208.1 AUGUSTUS tss 289313 289313 . - . transcript_id "g48.t2"; gene_id "g48"; # coding sequence = [atgccgttgcatttttggagccaggagatactcagaaaaatcaatgattgttgcggggggttcctcgcagtggatgaag # acactgcaaaatttaaggaattaaaatgggccagactattagtgagatcggaaggcttagagtggccgagctcattgcaagtggcagttggaaacgag # atgggcaacgagcgagaggttagggatgaaggaaaaggagactcacgcgttggtttcaaaatggcgaatgtacagacgcatggagaacctgcaaaagt # ggacgtgccgtgtgaaaatggtgaaaggggatgcagaaaggcagctgcgttctctgaagcgatgtcggaaaaagtagcagatggtgacaggcccgcgg # aggagggccaagtgactgaaggccacaaagaattaatggaaatgggccggcccaagtctttaccctataaaggccctgaggtggtgatggaacgatcc # attgaggctagggctcccgacaggggactgggcgtcagtggagagcttgagagggaaatgataggctctcagatggggtcgcgttcaccggccgtcaa # tctcacagagttcaccaacgaagccttgctggaggatccaaatggggaaagtgtagccatggctggggtcttcaatcagagcagtagctcgaatgaag # ttgggggagcagttatgggtcctttaaggatgatatgggcggatgggagggaggccgaggtattgcaaatggcgggtagggaagcaggggttttcgga # gagaaatcagagggggttacggataggatcctccatgaggatatggaggagagggaagaagagggggaaccttgttggcaatctagtagtttggctaa # gtttagccgctatattggaatgccgacggagggattcgaaagggaaattttgttattactgaaaagaatgaaagaaaggaagattcagaaaggaaaat # tagaccgcaaaaaaaggaaaaaattgaagtcgtcaaaatttgaaagagaattgagaaaattggaatggatagtgaactatattggagaagaaggagga # gaagaaggggaaactaagatccaagacatgtcaaagggtattattcgcagcctaggggtgggaagatatcttgactggggggcagtggattcaagagg # ggcagttggtggtatagtggtgttttgggacaacagagtattggacttggttgatattcaaaaaggggattttaatgccatcctaagtcctaaagagc # gcaacagaggggggagcctgaattcgaacatgagaaggttcttagaaattatagaagacttagagttaaaggatgtgcctttagtcgggggccctttt # acttggaacggaggggtgaataatcagaccttcttaaggctggatagggggtgtgagaagaggcccttcccttttagatttgaaaacatgtggttgaa # agtggaaggtgttaaggagcttatgaagtcttggattgagctcagaaaaaatgcggcgttggagcaggtgcagttttgggatgcaaaggagaaaatta # gcagactgaatttggaagagctggaagctagggaagattataaaaaatgggttttacttgaagaaatcaattggggcaaaaatctagggaattcgggg # gattggcgtccttctatatccgggctgcagttagagactctggatcagttggatgctagtactttggagagcccgttcacggaagaggaggtgttcaa # tgccttgttgagttgcaatggggataaagctccggggccagatggattctctatggctttctggcaatttgcttgggatttcgtgaaggcggatgtgt # tgtgttttttcaaggagttctatgaaaatggaaaatttgttaaaagcctaaatgcaactttttttgtcttaattccaaaaaaagtgggagctgaagac # ttgggggattttaggcctataagcttggtgggaagcttgtataagtggttggccaaggtcttagccaataggctaaaaaaggtggttggaaaggtgat # ctccaaggctcaaggggcgtttgtggaaggaagacaaatcctagacgcaatgttgatagccaatgaagccattgattcgactctgaaaaataatgaga # gtgtcatcttatgcaaattggatatagagaaggcttatgataatgtggattggacttttattctcacagttatgcagaaaatgggttttggggagaaa # tggatcaggtggattaaatggtgcatctccactgcaagtttttctgtgttggtcaatggaacccctacaggttttttccaaagctcaaagggattaag # gcagggtgatcccttttccccttatctctttgttatagcaatggaggtttttagcgtttttctcaaaagggctgtagagggaggctatttatcggggt # gtagggtcaaggggaggagtgaagaaggggtccttatatcccatttgttgttcgccgatgatactctggtgttttgtaatccgtctcaagaccacttg # acttatcttagttggttacttatgtggttcgaggccacttcgggattgagaataaatttggaaaaaagtgaactcattcctgtaggaagggtagagaa # tatggatgaccttgcttgggagtttggttgcaaagtgggtagcttgccgtccacatatttggggatgcccttgggggcttctttcaaatcaacatcag # tttgggatggagtggaagatcgattccgtaaaaggctagtcaaacggagattagaaaagattcaaagggacttcctttggggtgggggtaatttggag # cgaaagcctcatctagtaagatgggaggtggtgtgcttaatgattagagggaaatatgaagaagagagagggggttggtcctctcgggaagtgagaga # ggctcatggcttggggttgtggaaagggataaggatggattgggaattagtgagcaataggttggtcttcattgttggtaatgggaggagggaagaaa # gtgtggcagatgtttgggactccttggcggaggggggatgggggggttggaatccatgctttttaagagctttcaatgattgggaggtagaggaagcg # tcaagttttatggagcggttacatcgtaacagagttattgaggatgtggaggacatggtatcctggactgaaactaagagtggtaaattctcggttaa # atctctatacttggcccttgaagcggggtgttcgactcggtttccttcaagccttatttggaatgagaatgtgcagcccaagattagtttttttgcat # gggaggctacgtggggcaaagcactaaccttggacaaggtgcaaaaaagaggatgggctttggcaaatagatgttttttgtgtcttgagaatgagtag] # protein sequence = [MPLHFWSQEILRKINDCCGGFLAVDEDTAKFKELKWARLLVRSEGLEWPSSLQVAVGNEMGNEREVRDEGKGDSRVGF # KMANVQTHGEPAKVDVPCENGERGCRKAAAFSEAMSEKVADGDRPAEEGQVTEGHKELMEMGRPKSLPYKGPEVVMERSIEARAPDRGLGVSGELERE # MIGSQMGSRSPAVNLTEFTNEALLEDPNGESVAMAGVFNQSSSSNEVGGAVMGPLRMIWADGREAEVLQMAGREAGVFGEKSEGVTDRILHEDMEERE # EEGEPCWQSSSLAKFSRYIGMPTEGFEREILLLLKRMKERKIQKGKLDRKKRKKLKSSKFERELRKLEWIVNYIGEEGGEEGETKIQDMSKGIIRSLG # VGRYLDWGAVDSRGAVGGIVVFWDNRVLDLVDIQKGDFNAILSPKERNRGGSLNSNMRRFLEIIEDLELKDVPLVGGPFTWNGGVNNQTFLRLDRGCE # KRPFPFRFENMWLKVEGVKELMKSWIELRKNAALEQVQFWDAKEKISRLNLEELEAREDYKKWVLLEEINWGKNLGNSGDWRPSISGLQLETLDQLDA # STLESPFTEEEVFNALLSCNGDKAPGPDGFSMAFWQFAWDFVKADVLCFFKEFYENGKFVKSLNATFFVLIPKKVGAEDLGDFRPISLVGSLYKWLAK # VLANRLKKVVGKVISKAQGAFVEGRQILDAMLIANEAIDSTLKNNESVILCKLDIEKAYDNVDWTFILTVMQKMGFGEKWIRWIKWCISTASFSVLVN # GTPTGFFQSSKGLRQGDPFSPYLFVIAMEVFSVFLKRAVEGGYLSGCRVKGRSEEGVLISHLLFADDTLVFCNPSQDHLTYLSWLLMWFEATSGLRIN # LEKSELIPVGRVENMDDLAWEFGCKVGSLPSTYLGMPLGASFKSTSVWDGVEDRFRKRLVKRRLEKIQRDFLWGGGNLERKPHLVRWEVVCLMIRGKY # EEERGGWSSREVREAHGLGLWKGIRMDWELVSNRLVFIVGNGRREESVADVWDSLAEGGWGGWNPCFLRAFNDWEVEEASSFMERLHRNRVIEDVEDM # VSWTETKSGKFSVKSLYLALEAGCSTRFPSSLIWNENVQPKISFFAWEATWGKALTLDKVQKRGWALANRCFLCLENE] # end gene g48 ### # start gene g49 NW_003724208.1 AUGUSTUS gene 290898 296505 0.14 + . g49 NW_003724208.1 AUGUSTUS transcript 290898 296505 0.14 + . g49.t1 NW_003724208.1 AUGUSTUS tss 290898 290898 . + . transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS exon 290898 290944 . + . transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS start_codon 290927 290929 . + 0 transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS initial 290927 290944 1 + 0 transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS internal 291125 291270 0.98 + 0 transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS internal 291556 291932 0.86 + 1 transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS internal 294512 294627 0.97 + 2 transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS internal 294832 294966 1 + 0 transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS internal 295154 295366 0.9 + 0 transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS internal 295490 295702 0.99 + 0 transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS terminal 296221 296310 0.85 + 0 transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS intron 290945 291124 0.98 + . transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS intron 291271 291555 1 + . transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS intron 291933 294511 0.83 + . transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS intron 294628 294831 0.97 + . transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS intron 294967 295153 1 + . transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS intron 295367 295489 0.9 + . transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS intron 295703 296220 0.81 + . transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS CDS 290927 290944 1 + 0 transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS CDS 291125 291270 0.98 + 0 transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS exon 291125 291270 . + . transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS CDS 291556 291932 0.86 + 1 transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS exon 291556 291932 . + . transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS CDS 294512 294627 0.97 + 2 transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS exon 294512 294627 . + . transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS CDS 294832 294966 1 + 0 transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS exon 294832 294966 . + . transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS CDS 295154 295366 0.9 + 0 transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS exon 295154 295366 . + . transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS CDS 295490 295702 0.99 + 0 transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS exon 295490 295702 . + . transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS CDS 296221 296310 0.85 + 0 transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS exon 296221 296505 . + . transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS stop_codon 296308 296310 . + 0 transcript_id "g49.t1"; gene_id "g49"; NW_003724208.1 AUGUSTUS tts 296505 296505 . + . transcript_id "g49.t1"; gene_id "g49"; # coding sequence = [atgcaaccaatttggctggagaagtacaagaataaaccttggctcttggaggatgaaacaggtcaatatcagtatcatg # gtcagcttgagggttcacaatcagcaacttactacctactaatgatgcaaggaaaggaatttgttgctattccagctggatcttggtacaactttaac # aaagttgctcagtataagcaactcaccttggaggaagcagaagagaagatgaagaataggaggaggactgcagatggatatcaaagatggatgatgaa # ggcagcaaataatggacctgctgcatttggtgaagtggagaagcttgatgacaaggagactggtggtgcagctggtggtgggaggggacgtaaaaaac # aaactggtgatgaagaagaaggtaatgtctcggataaggcagaggaagatgaagaagaagaggcagaaaggaagaacagacttggacttaacaaaaga # agtggtgatgacgatgaagaaggtccaagaggtggtgatcatgatttagatgatgatgatattgagaagggtgatgattgggagcatgaagaaatttt # cactgatgacgatgaagctgttggtaatgatcctgaggaacgggaagatttggcacccgaagttcctgcacctccagaaataaagcaggatgaagagg # acgaagatgattctaatgaagaggagggaggattaagcaaatctggaaaggagttgaaaaaactgcttggaaaagctgctggaatgaatgattcggat # gcagaggatgacgatgacgatgaagaagaagatgagattggcctttctcctgtgctggctccaaaacagaaggatgtacctaaagaagagcctgctga # taacagtcctatgaaatcagctactgcttctgctcggtcaacaccacctacttcaaaatcatcaaaagggaagagaaagtcaaatggtgatgacatga # aaacaactaatggtggacctccaaagaaggtgaagacagaaaatgaatcaaaatcttctgcaaaagatgaaggcccatctccttctaaagttactgca # actccaaagggaacgccatcatcatctgtgaaaactggatcaacatcgtcagctggaccagtcacagaagatgaaatcagggctgttttattgcagaa # ggcacctgtgaccactcaggatcttgtcgccaaatttaaagccagactgaaatcccaagaggataagaaggcttttgctgatatactgaggagaatct # ctaagatacaaaagactaatggacctaactatgttgtgttgagagataaatga] # protein sequence = [MQPIWLEKYKNKPWLLEDETGQYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKN # RRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSDKAEEDEEEEAERKNRLGLNKRSGDDDEEGPRGGDHDLDDD # DIEKGDDWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMNDSDAEDDDDDEEEDEIGLSPVL # APKQKDVPKEEPADNSPMKSATASARSTPPTSKSSKGKRKSNGDDMKTTNGGPPKKVKTENESKSSAKDEGPSPSKVTATPKGTPSSSVKTGSTSSAG # PVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVVLRDK] # end gene g49 ### # start gene g50 NW_003724208.1 AUGUSTUS gene 298389 299573 0.13 - . g50 NW_003724208.1 AUGUSTUS transcript 298389 299573 0.13 - . g50.t1 NW_003724208.1 AUGUSTUS tts 298389 298389 . - . transcript_id "g50.t1"; gene_id "g50"; NW_003724208.1 AUGUSTUS exon 298389 298880 . - . transcript_id "g50.t1"; gene_id "g50"; NW_003724208.1 AUGUSTUS stop_codon 298528 298530 . - 0 transcript_id "g50.t1"; gene_id "g50"; NW_003724208.1 AUGUSTUS terminal 298528 298880 1 - 2 transcript_id "g50.t1"; gene_id "g50"; NW_003724208.1 AUGUSTUS initial 299368 299530 0.99 - 0 transcript_id "g50.t1"; gene_id "g50"; NW_003724208.1 AUGUSTUS intron 298881 299367 0.99 - . transcript_id "g50.t1"; gene_id "g50"; NW_003724208.1 AUGUSTUS CDS 298528 298880 1 - 2 transcript_id "g50.t1"; gene_id "g50"; NW_003724208.1 AUGUSTUS CDS 299368 299530 0.99 - 0 transcript_id "g50.t1"; gene_id "g50"; NW_003724208.1 AUGUSTUS exon 299368 299573 . - . transcript_id "g50.t1"; gene_id "g50"; NW_003724208.1 AUGUSTUS start_codon 299528 299530 . - 0 transcript_id "g50.t1"; gene_id "g50"; NW_003724208.1 AUGUSTUS tss 299573 299573 . - . transcript_id "g50.t1"; gene_id "g50"; # coding sequence = [atggctggagtgaagatgatcgtggctctgttgctcgtggtctatgtgagttgggtgggagcccagacgcatcacgtcg # tcggcggcgaccgtggctgggccaagtcctccgaggtcagagactggctgtccgacaaagtgttcagagtcggagacaaaatctggttcatatactcc # gcagcacaggagggcgttgctgagctcaggagcaaggaggaattcgagtcgtgcgatgtgagcaaccccatcaagatgtacacggacggtctagatag # cgtacccttggacggagaagggatccgctacttcacgagcagcaagacagagagctgcaaagatggcctgaagctacacgttgatgtccagcccacta # gtgagatcgggagcgttgccacgtcagagacctttgcagagacgctggctgaggggccctcagcaccttctgctgcggcccacatcagtgcgctttct # ccactatttttgatgggtctgctgatctgttacttcggcccatga] # protein sequence = [MAGVKMIVALLLVVYVSWVGAQTHHVVGGDRGWAKSSEVRDWLSDKVFRVGDKIWFIYSAAQEGVAELRSKEEFESCD # VSNPIKMYTDGLDSVPLDGEGIRYFTSSKTESCKDGLKLHVDVQPTSEIGSVATSETFAETLAEGPSAPSAAAHISALSPLFLMGLLICYFGP] # end gene g50 ### # start gene g51 NW_003724208.1 AUGUSTUS gene 307206 308403 0.04 - . g51 NW_003724208.1 AUGUSTUS transcript 307206 308403 0.04 - . g51.t1 NW_003724208.1 AUGUSTUS tts 307206 307206 . - . transcript_id "g51.t1"; gene_id "g51"; NW_003724208.1 AUGUSTUS exon 307206 307758 . - . transcript_id "g51.t1"; gene_id "g51"; NW_003724208.1 AUGUSTUS stop_codon 307247 307249 . - 0 transcript_id "g51.t1"; gene_id "g51"; NW_003724208.1 AUGUSTUS terminal 307247 307758 1 - 2 transcript_id "g51.t1"; gene_id "g51"; NW_003724208.1 AUGUSTUS initial 308189 308351 0.91 - 0 transcript_id "g51.t1"; gene_id "g51"; NW_003724208.1 AUGUSTUS intron 307759 308188 0.91 - . transcript_id "g51.t1"; gene_id "g51"; NW_003724208.1 AUGUSTUS CDS 307247 307758 1 - 2 transcript_id "g51.t1"; gene_id "g51"; NW_003724208.1 AUGUSTUS CDS 308189 308351 0.91 - 0 transcript_id "g51.t1"; gene_id "g51"; NW_003724208.1 AUGUSTUS exon 308189 308403 . - . transcript_id "g51.t1"; gene_id "g51"; NW_003724208.1 AUGUSTUS start_codon 308349 308351 . - 0 transcript_id "g51.t1"; gene_id "g51"; NW_003724208.1 AUGUSTUS tss 308403 308403 . - . transcript_id "g51.t1"; gene_id "g51"; # coding sequence = [atggcagaagtgaagctagttgtggctctgttgctcctcgtctatgtgagttgggcgggagccctggtgcaccacgtcg # tcggcggcgaccgtggctgggacacatcttccgatgtccaggcctggttgtccaacaaagtgttcagagtcggagacaaaatctggttcatatactcc # ggaggacaggagggcgtagttgagcttaagagcagggaggaattcgattcgtgcgatgtgagcaaccccatcaggacatacacggagggtctagatgc # tgtattaatgggtagcgaagggattcgctacttcacaagcagtaagccaaagagctgcaaagacggcctgaggctacttgtggaggtccagtccaatc # gtgagatcaagagcgatgccaagtcagagaccgctacaataacgctggctgctgggcccatatccttttctgttgtagcccccgctgcaacgaccctg # gctgctgggcccatatccttttctgctggagcccccgctgcaacgaccctggctgctgggcccatatcctctcctgctgtaggccttgctgcaacgac # cctggctgatgggcccatatcatcttctgcagtagcccccgctgcaacgaccctggctcctgagcccatatcaccttctgctgcaacccatttcactt # gcacctag] # protein sequence = [MAEVKLVVALLLLVYVSWAGALVHHVVGGDRGWDTSSDVQAWLSNKVFRVGDKIWFIYSGGQEGVVELKSREEFDSCD # VSNPIRTYTEGLDAVLMGSEGIRYFTSSKPKSCKDGLRLLVEVQSNREIKSDAKSETATITLAAGPISFSVVAPAATTLAAGPISFSAGAPAATTLAA # GPISSPAVGLAATTLADGPISSSAVAPAATTLAPEPISPSAATHFTCT] # end gene g51 ### # start gene g52 NW_003724208.1 AUGUSTUS gene 310610 311723 0.12 - . g52 NW_003724208.1 AUGUSTUS transcript 310610 311723 0.12 - . g52.t1 NW_003724208.1 AUGUSTUS tts 310610 310610 . - . transcript_id "g52.t1"; gene_id "g52"; NW_003724208.1 AUGUSTUS exon 310610 311723 . - . transcript_id "g52.t1"; gene_id "g52"; NW_003724208.1 AUGUSTUS stop_codon 310685 310687 . - 0 transcript_id "g52.t1"; gene_id "g52"; NW_003724208.1 AUGUSTUS single 310685 311272 0.92 - 0 transcript_id "g52.t1"; gene_id "g52"; NW_003724208.1 AUGUSTUS CDS 310685 311272 0.92 - 0 transcript_id "g52.t1"; gene_id "g52"; NW_003724208.1 AUGUSTUS start_codon 311270 311272 . - 0 transcript_id "g52.t1"; gene_id "g52"; NW_003724208.1 AUGUSTUS tss 311723 311723 . - . transcript_id "g52.t1"; gene_id "g52"; # coding sequence = [atgggtgcaaagctatgttgtatgagtctgtctacctcagactttaatgagtcaaaaggcattgaaggacatgagcaga # agccaccaccaaggtcgaccatgctcaacttcaccatcaggcctagatgcatgaagaaagaggaggaggaggagaagaagaagaagaagaagagagat # catgaccagtggctgccacctgagaagaaatctacgaagatgtgtaatctagcaactctggaggagtggctcttgtcctctccggggatgaagccggc # cgactccataaccgggggtgagcttcatgttttcaagcagctgtccaaacatagggttcacccatcttcaagtagggtccatgcagagttgatcaccc # ccagtccaagagacagaataatctcattggagaggattgatgaaggagatcatcatggaggaggaggagagaccttggaggtgggttcctcagtgggc # agaagcaagagtgggcagctggggagaaaggtgacgtttaggtggccagaggctgatgttatcgtattttactcaccggaggggacttccgaagaaag # tgatgaacactctccctag] # protein sequence = [MGAKLCCMSLSTSDFNESKGIEGHEQKPPPRSTMLNFTIRPRCMKKEEEEEKKKKKKRDHDQWLPPEKKSTKMCNLAT # LEEWLLSSPGMKPADSITGGELHVFKQLSKHRVHPSSSRVHAELITPSPRDRIISLERIDEGDHHGGGGETLEVGSSVGRSKSGQLGRKVTFRWPEAD # VIVFYSPEGTSEESDEHSP] # end gene g52 ### # start gene g53 NW_003724208.1 AUGUSTUS gene 315438 317572 0.11 + . g53 NW_003724208.1 AUGUSTUS transcript 315438 317572 0.11 + . g53.t1 NW_003724208.1 AUGUSTUS tss 315438 315438 . + . transcript_id "g53.t1"; gene_id "g53"; NW_003724208.1 AUGUSTUS exon 315438 315644 . + . transcript_id "g53.t1"; gene_id "g53"; NW_003724208.1 AUGUSTUS exon 316586 316647 . + . transcript_id "g53.t1"; gene_id "g53"; NW_003724208.1 AUGUSTUS start_codon 316592 316594 . + 0 transcript_id "g53.t1"; gene_id "g53"; NW_003724208.1 AUGUSTUS initial 316592 316647 0.62 + 0 transcript_id "g53.t1"; gene_id "g53"; NW_003724208.1 AUGUSTUS terminal 316728 316845 0.7 + 1 transcript_id "g53.t1"; gene_id "g53"; NW_003724208.1 AUGUSTUS intron 316648 316727 0.62 + . transcript_id "g53.t1"; gene_id "g53"; NW_003724208.1 AUGUSTUS CDS 316592 316647 0.62 + 0 transcript_id "g53.t1"; gene_id "g53"; NW_003724208.1 AUGUSTUS CDS 316728 316845 0.7 + 1 transcript_id "g53.t1"; gene_id "g53"; NW_003724208.1 AUGUSTUS exon 316728 317572 . + . transcript_id "g53.t1"; gene_id "g53"; NW_003724208.1 AUGUSTUS stop_codon 316843 316845 . + 0 transcript_id "g53.t1"; gene_id "g53"; NW_003724208.1 AUGUSTUS tts 317572 317572 . + . transcript_id "g53.t1"; gene_id "g53"; # coding sequence = [atggggaaaagatggagtgaaagaggaaatgaaaggtgtcagttgaagagcagtgggatttccacccaatactttgctt # tgcttcctcaaggcttaaatcccatattctcttctttatctctgccgcctctttttgcggggtttctctcacactccaagagctctctgggttga] # protein sequence = [MGKRWSERGNERCQLKSSGISTQYFALLPQGLNPIFSSLSLPPLFAGFLSHSKSSLG] # end gene g53 ### # start gene g54 NW_003724208.1 AUGUSTUS gene 318068 322499 0.02 + . g54 NW_003724208.1 AUGUSTUS transcript 318068 322499 0.02 + . g54.t1 NW_003724208.1 AUGUSTUS tss 318068 318068 . + . transcript_id "g54.t1"; gene_id "g54"; NW_003724208.1 AUGUSTUS exon 318068 318153 . + . transcript_id "g54.t1"; gene_id "g54"; NW_003724208.1 AUGUSTUS exon 319397 319541 . + . transcript_id "g54.t1"; gene_id "g54"; NW_003724208.1 AUGUSTUS start_codon 319467 319469 . + 0 transcript_id "g54.t1"; gene_id "g54"; NW_003724208.1 AUGUSTUS initial 319467 319541 1 + 0 transcript_id "g54.t1"; gene_id "g54"; NW_003724208.1 AUGUSTUS internal 320031 320284 0.56 + 0 transcript_id "g54.t1"; gene_id "g54"; NW_003724208.1 AUGUSTUS internal 320465 320616 0.25 + 1 transcript_id "g54.t1"; gene_id "g54"; NW_003724208.1 AUGUSTUS internal 321038 321179 0.25 + 2 transcript_id "g54.t1"; gene_id "g54"; NW_003724208.1 AUGUSTUS terminal 321492 321552 0.07 + 1 transcript_id "g54.t1"; gene_id "g54"; NW_003724208.1 AUGUSTUS intron 319542 320030 1 + . transcript_id "g54.t1"; gene_id "g54"; NW_003724208.1 AUGUSTUS intron 320285 320464 0.29 + . transcript_id "g54.t1"; gene_id "g54"; NW_003724208.1 AUGUSTUS intron 320617 321037 0.23 + . transcript_id "g54.t1"; gene_id "g54"; NW_003724208.1 AUGUSTUS intron 321180 321491 0.17 + . transcript_id "g54.t1"; gene_id "g54"; NW_003724208.1 AUGUSTUS CDS 319467 319541 1 + 0 transcript_id "g54.t1"; gene_id "g54"; NW_003724208.1 AUGUSTUS CDS 320031 320284 0.56 + 0 transcript_id "g54.t1"; gene_id "g54"; NW_003724208.1 AUGUSTUS exon 320031 320284 . + . transcript_id "g54.t1"; gene_id "g54"; NW_003724208.1 AUGUSTUS CDS 320465 320616 0.25 + 1 transcript_id "g54.t1"; gene_id "g54"; NW_003724208.1 AUGUSTUS exon 320465 320616 . + . transcript_id "g54.t1"; gene_id "g54"; NW_003724208.1 AUGUSTUS CDS 321038 321179 0.25 + 2 transcript_id "g54.t1"; gene_id "g54"; NW_003724208.1 AUGUSTUS exon 321038 321179 . + . transcript_id "g54.t1"; gene_id "g54"; NW_003724208.1 AUGUSTUS CDS 321492 321552 0.07 + 1 transcript_id "g54.t1"; gene_id "g54"; NW_003724208.1 AUGUSTUS exon 321492 322499 . + . transcript_id "g54.t1"; gene_id "g54"; NW_003724208.1 AUGUSTUS stop_codon 321550 321552 . + 0 transcript_id "g54.t1"; gene_id "g54"; NW_003724208.1 AUGUSTUS tts 322499 322499 . + . transcript_id "g54.t1"; gene_id "g54"; # coding sequence = [atgcaaaaggacaacactaccagcgccctgccaacacctgctgcacgtgttcggcagcgtaaacgctcaaatgaggttc # ctccagaggctagtaaagcaaatggaaaccatcttcttgctgatgatcggaacaaatacaggtctatgtggatccgagcacgctcaacagtctggatg # attgggggatttgcattaatcatctacatgggtcatctctacatttgggccatggtggttgtcatccaaatctttatggcaagagagctgttctgtct # actcaggaaaactcatgaagacagtcatctcccaggtttcaggctattaaattggcactttttcttcacagcaatgctatttgtatatggccgcattc # tcagtcaacggctggtcaatacagtaactcctgacaaattcttatataagcttgtgggcaaccttatcaagtatcatatggttacttgttatttcttg # tacattgcaggttttatgtggtttattcttacgttaaagaagaagatgtacaagtatcaatttggccagtatgcatggacacacatgattctaattgt # ggtgtttacccagtctgccttcaccgtggccaacatttttgaaggaattttctggaaggacagggggtcttacaatgttggagggtgtgggccagggt # gctatttcttaaattag] # protein sequence = [MQKDNTTSALPTPAARVRQRKRSNEVPPEASKANGNHLLADDRNKYRSMWIRARSTVWMIGGFALIIYMGHLYIWAMV # VVIQIFMARELFCLLRKTHEDSHLPGFRLLNWHFFFTAMLFVYGRILSQRLVNTVTPDKFLYKLVGNLIKYHMVTCYFLYIAGFMWFILTLKKKMYKY # QFGQYAWTHMILIVVFTQSAFTVANIFEGIFWKDRGSYNVGGCGPGCYFLN] # end gene g54 ### # start gene g55 NW_003724208.1 AUGUSTUS gene 322958 324868 0.17 + . g55 NW_003724208.1 AUGUSTUS transcript 322958 324868 0.09 + . g55.t1 NW_003724208.1 AUGUSTUS tss 322958 322958 . + . transcript_id "g55.t1"; gene_id "g55"; NW_003724208.1 AUGUSTUS exon 322958 323144 . + . transcript_id "g55.t1"; gene_id "g55"; NW_003724208.1 AUGUSTUS start_codon 323046 323048 . + 0 transcript_id "g55.t1"; gene_id "g55"; NW_003724208.1 AUGUSTUS initial 323046 323144 0.83 + 0 transcript_id "g55.t1"; gene_id "g55"; NW_003724208.1 AUGUSTUS internal 323233 323319 0.8 + 0 transcript_id "g55.t1"; gene_id "g55"; NW_003724208.1 AUGUSTUS internal 324073 324201 0.64 + 0 transcript_id "g55.t1"; gene_id "g55"; NW_003724208.1 AUGUSTUS internal 324309 324365 0.55 + 0 transcript_id "g55.t1"; gene_id "g55"; NW_003724208.1 AUGUSTUS intron 323145 323232 0.99 + . transcript_id "g55.t1"; gene_id "g55"; NW_003724208.1 AUGUSTUS intron 323320 324072 0.65 + . transcript_id "g55.t1"; gene_id "g55"; NW_003724208.1 AUGUSTUS intron 324202 324308 0.68 + . transcript_id "g55.t1"; gene_id "g55"; NW_003724208.1 AUGUSTUS intron 324366 324868 0.14 + . transcript_id "g55.t1"; gene_id "g55"; NW_003724208.1 AUGUSTUS CDS 323046 323144 0.83 + 0 transcript_id "g55.t1"; gene_id "g55"; NW_003724208.1 AUGUSTUS CDS 323233 323319 0.8 + 0 transcript_id "g55.t1"; gene_id "g55"; NW_003724208.1 AUGUSTUS exon 323233 323319 . + . transcript_id "g55.t1"; gene_id "g55"; NW_003724208.1 AUGUSTUS CDS 324073 324201 0.64 + 0 transcript_id "g55.t1"; gene_id "g55"; NW_003724208.1 AUGUSTUS exon 324073 324201 . + . transcript_id "g55.t1"; gene_id "g55"; NW_003724208.1 AUGUSTUS CDS 324309 324365 0.55 + 0 transcript_id "g55.t1"; gene_id "g55"; NW_003724208.1 AUGUSTUS exon 324309 324365 . + . transcript_id "g55.t1"; gene_id "g55"; # coding sequence = [atgcaagcacatcattctaaacccttgtacaataccaacttgttcatgcagcttgcaaatatcatgggtcgttttcagt # ggctaacatgtccaaggaaggatttatcaactggttggcttcattgtgatcctggtccgttgtttaagccagagtatttcgatttatcaggatgggtt # cctagatggtttccttggaaggaggtctccattttaccagttcagtggcatgctttatgtgtcggtttgtttgcatcaataatagcaccttttggagg # attttttgcaagtggctttaaaagagcttttaagatcaaggactttggcgatagtattcctggacacggtggaattactgatagaatggattgtcag] # protein sequence = [MQAHHSKPLYNTNLFMQLANIMGRFQWLTCPRKDLSTGWLHCDPGPLFKPEYFDLSGWVPRWFPWKEVSILPVQWHAL # CVGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQ] NW_003724208.1 AUGUSTUS transcript 322958 324623 0.05 + . g55.t2 NW_003724208.1 AUGUSTUS tss 322958 322958 . + . transcript_id "g55.t2"; gene_id "g55"; NW_003724208.1 AUGUSTUS exon 322958 323144 . + . transcript_id "g55.t2"; gene_id "g55"; NW_003724208.1 AUGUSTUS start_codon 323046 323048 . + 0 transcript_id "g55.t2"; gene_id "g55"; NW_003724208.1 AUGUSTUS initial 323046 323144 0.83 + 0 transcript_id "g55.t2"; gene_id "g55"; NW_003724208.1 AUGUSTUS internal 323233 323319 0.8 + 0 transcript_id "g55.t2"; gene_id "g55"; NW_003724208.1 AUGUSTUS internal 324073 324201 0.64 + 0 transcript_id "g55.t2"; gene_id "g55"; NW_003724208.1 AUGUSTUS internal 324309 324365 0.55 + 0 transcript_id "g55.t2"; gene_id "g55"; NW_003724208.1 AUGUSTUS terminal 324515 324562 0.22 + 0 transcript_id "g55.t2"; gene_id "g55"; NW_003724208.1 AUGUSTUS intron 323145 323232 0.99 + . transcript_id "g55.t2"; gene_id "g55"; NW_003724208.1 AUGUSTUS intron 323320 324072 0.65 + . transcript_id "g55.t2"; gene_id "g55"; NW_003724208.1 AUGUSTUS intron 324202 324308 0.68 + . transcript_id "g55.t2"; gene_id "g55"; NW_003724208.1 AUGUSTUS intron 324366 324514 0.29 + . transcript_id "g55.t2"; gene_id "g55"; NW_003724208.1 AUGUSTUS CDS 323046 323144 0.83 + 0 transcript_id "g55.t2"; gene_id "g55"; NW_003724208.1 AUGUSTUS CDS 323233 323319 0.8 + 0 transcript_id "g55.t2"; gene_id "g55"; NW_003724208.1 AUGUSTUS exon 323233 323319 . + . transcript_id "g55.t2"; gene_id "g55"; NW_003724208.1 AUGUSTUS CDS 324073 324201 0.64 + 0 transcript_id "g55.t2"; gene_id "g55"; NW_003724208.1 AUGUSTUS exon 324073 324201 . + . transcript_id "g55.t2"; gene_id "g55"; NW_003724208.1 AUGUSTUS CDS 324309 324365 0.55 + 0 transcript_id "g55.t2"; gene_id "g55"; NW_003724208.1 AUGUSTUS exon 324309 324365 . + . transcript_id "g55.t2"; gene_id "g55"; NW_003724208.1 AUGUSTUS CDS 324515 324562 0.22 + 0 transcript_id "g55.t2"; gene_id "g55"; NW_003724208.1 AUGUSTUS exon 324515 324623 . + . transcript_id "g55.t2"; gene_id "g55"; NW_003724208.1 AUGUSTUS stop_codon 324560 324562 . + 0 transcript_id "g55.t2"; gene_id "g55"; NW_003724208.1 AUGUSTUS tts 324623 324623 . + . transcript_id "g55.t2"; gene_id "g55"; # coding sequence = [atgcaagcacatcattctaaacccttgtacaataccaacttgttcatgcagcttgcaaatatcatgggtcgttttcagt # ggctaacatgtccaaggaaggatttatcaactggttggcttcattgtgatcctggtccgttgtttaagccagagtatttcgatttatcaggatgggtt # cctagatggtttccttggaaggaggtctccattttaccagttcagtggcatgctttatgtgtcggtttgtttgcatcaataatagcaccttttggagg # attttttgcaagtggctttaaaagagcttttaagatcaaggactttggcgatagtattcctggacacggtggaattactgatagaatggattgtcagg # agtttgaaccctacttttggaatggcatacaacgaggaagttactga] # protein sequence = [MQAHHSKPLYNTNLFMQLANIMGRFQWLTCPRKDLSTGWLHCDPGPLFKPEYFDLSGWVPRWFPWKEVSILPVQWHAL # CVGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQEFEPYFWNGIQRGSY] NW_003724208.1 AUGUSTUS transcript 322958 324623 0.03 + . g55.t3 NW_003724208.1 AUGUSTUS tss 322958 322958 . + . transcript_id "g55.t3"; gene_id "g55"; NW_003724208.1 AUGUSTUS exon 322958 323144 . + . transcript_id "g55.t3"; gene_id "g55"; NW_003724208.1 AUGUSTUS start_codon 323046 323048 . + 0 transcript_id "g55.t3"; gene_id "g55"; NW_003724208.1 AUGUSTUS initial 323046 323144 0.83 + 0 transcript_id "g55.t3"; gene_id "g55"; NW_003724208.1 AUGUSTUS internal 323233 323319 0.8 + 0 transcript_id "g55.t3"; gene_id "g55"; NW_003724208.1 AUGUSTUS internal 324073 324201 0.64 + 0 transcript_id "g55.t3"; gene_id "g55"; NW_003724208.1 AUGUSTUS terminal 324309 324452 0.12 + 0 transcript_id "g55.t3"; gene_id "g55"; NW_003724208.1 AUGUSTUS intron 323145 323232 0.99 + . transcript_id "g55.t3"; gene_id "g55"; NW_003724208.1 AUGUSTUS intron 323320 324072 0.65 + . transcript_id "g55.t3"; gene_id "g55"; NW_003724208.1 AUGUSTUS intron 324202 324308 0.68 + . transcript_id "g55.t3"; gene_id "g55"; NW_003724208.1 AUGUSTUS CDS 323046 323144 0.83 + 0 transcript_id "g55.t3"; gene_id "g55"; NW_003724208.1 AUGUSTUS CDS 323233 323319 0.8 + 0 transcript_id "g55.t3"; gene_id "g55"; NW_003724208.1 AUGUSTUS exon 323233 323319 . + . transcript_id "g55.t3"; gene_id "g55"; NW_003724208.1 AUGUSTUS CDS 324073 324201 0.64 + 0 transcript_id "g55.t3"; gene_id "g55"; NW_003724208.1 AUGUSTUS exon 324073 324201 . + . transcript_id "g55.t3"; gene_id "g55"; NW_003724208.1 AUGUSTUS CDS 324309 324452 0.12 + 0 transcript_id "g55.t3"; gene_id "g55"; NW_003724208.1 AUGUSTUS exon 324309 324623 . + . transcript_id "g55.t3"; gene_id "g55"; NW_003724208.1 AUGUSTUS stop_codon 324450 324452 . + 0 transcript_id "g55.t3"; gene_id "g55"; NW_003724208.1 AUGUSTUS tts 324623 324623 . + . transcript_id "g55.t3"; gene_id "g55"; # coding sequence = [atgcaagcacatcattctaaacccttgtacaataccaacttgttcatgcagcttgcaaatatcatgggtcgttttcagt # ggctaacatgtccaaggaaggatttatcaactggttggcttcattgtgatcctggtccgttgtttaagccagagtatttcgatttatcaggatgggtt # cctagatggtttccttggaaggaggtctccattttaccagttcagtggcatgctttatgtgtcggtttgtttgcatcaataatagcaccttttggagg # attttttgcaagtggctttaaaagagcttttaagatcaaggactttggcgatagtattcctggacacggtggaattactgatagaatggattgtcagg # taagcttcaaagtgtgtagtgttcatctaggtgtacttgcattaggatataaacacacattgttgacagtgtttttccaagaataa] # protein sequence = [MQAHHSKPLYNTNLFMQLANIMGRFQWLTCPRKDLSTGWLHCDPGPLFKPEYFDLSGWVPRWFPWKEVSILPVQWHAL # CVGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQVSFKVCSVHLGVLALGYKHTLLTVFFQE] # end gene g55 ### # command line: # augustus --species=arabidopsis --UTR=on --strand=both --sample=100 --keep_viterbi=true --alternatives-from-sampling=true --minexonintronprob=0.08 --minmeanexonintronprob=0.4 --maxtracks=3 --genemodel=partial /data/www/augpred/webdata/predRhPG7WvS/genome.fa --codingseq=on --exonnames=on