FastQCFastQC Report
Вт 27 дек 2016
trimm.out

Summary

[OK]Basic Statistics

MeasureValue
Filenametrimm.out
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6993284
Sequences flagged as poor quality0
Sequence length30-36
%GC29

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCTCG3550.013.8802159
TCGGAAG9000.013.276373
CGGAAGA8450.012.3731264
GCCGTCT2052.759407E-911.65454619
GAGGCTC2251.3437239E-79.9544979
GACCGGA1552.3297277E-49.6608411
GATCGGA17050.09.485191
AGGCTCG2251.4371781E-69.29006710
GCGCTCG1450.00139697759.2679829
GGAAGAG11350.09.0789445
AGAGCTC5500.08.6882468
GATCGGT3552.2262611E-88.0144171
CGGAAGG1900.00181365517.8611214
ATCGGAA17900.07.76011232
AGCTCGG2000.00301159737.46523310
AGATCGG14650.07.409149630
GCTCGCA2453.6082932E-47.31267111
TCGGACG3101.3252551E-57.2270563
GCTCGTA6700.07.130764511
CGGAAGC2607.089593E-46.8935994
Produced by FastQC (version 0.11.2)