# motif_id motif_alt_id sequence_name start stop strand score p-value q-value matched_sequence 1 YP_003374227.1|recA 27 42 - 24.8765 3.45e-09 0.00208 GCGAACATTTGTTCGA 1 YP_003373808.1|lexA 96 111 - 24.2963 6.57e-09 0.00208 TCAAACATCTGTTCGA 1 YP_003373809.1|lysM 47 62 + 24.2963 6.57e-09 0.00208 TCAAACATCTGTTCGA 1 YP_003373364.1|rmuC 47 62 + 22.7407 2e-08 0.00307 TAGAACGTATGTTCGA 1 YP_003373502.1|HMPREF0424_0244 92 107 - 22.5062 2.26e-08 0.00307 TCGAACGTTTGTTCTA 1 YP_003374043.1|HMPREF0424_0826 50 65 + 22.5062 2.26e-08 0.00307 TCGAACGTTTGTTCTA 1 YP_003373501.1|HMPREF0424_0243 84 99 + 22.5062 2.26e-08 0.00307 TCGAACGTTTGTTCTA 1 YP_003374035.1|HMPREF0424_0817 77 92 - 21.9259 3.3e-08 0.00348 TCGAACACTTGTTCTA 1 YP_003374034.1|uvrA 133 148 + 21.9259 3.3e-08 0.00348 TCGAACACTTGTTCTA 1 YP_003374054.1|ruvA 9 24 - 21.6049 4.14e-08 0.00393 TAGAACATCTGTTCTA 1 YP_003373809.1|lysM 47 62 - 18.9136 1.87e-07 0.0148 TCGAACAGATGTTTGA 1 YP_003373808.1|lexA 96 111 + 18.9136 1.87e-07 0.0148 TCGAACAGATGTTTGA 1 YP_003374054.1|ruvA 9 24 + 18.0494 2.92e-07 0.0213 TAGAACAGATGTTCTA 1 YP_003373808.1|lexA 44 59 - 17.1111 4.55e-07 0.0272 TAATACATCTGTTCGA 1 YP_003373809.1|lysM 99 114 + 17.1111 4.55e-07 0.0272 TAATACATCTGTTCGA 1 YP_003373364.1|rmuC 47 62 - 17.0988 4.59e-07 0.0272 TCGAACATACGTTCTA 1 YP_003373940.1|HMPREF0424_0713 133 148 - 13.8765 1.84e-06 0.103 CAAAACGTCTGTGCGA 1 YP_003373809.1|lysM 115 130 - 13.321 2.29e-06 0.105 CTGAACATTTGTTCTA 1 YP_003373808.1|lexA 28 43 + 13.321 2.29e-06 0.105 CTGAACATTTGTTCTA 1 YP_003373809.1|lysM 79 94 - 13.284 2.33e-06 0.105 TGACACATTTGTTCGA 1 YP_003373808.1|lexA 64 79 + 13.284 2.33e-06 0.105 TGACACATTTGTTCGA 1 YP_003373809.1|lysM 99 114 - 11.4198 4.72e-06 0.195 TCGAACAGATGTATTA 1 YP_003373808.1|lexA 44 59 + 11.4198 4.72e-06 0.195 TCGAACAGATGTATTA 1 YP_003374227.1|recA 27 42 + 10.5679 6.39e-06 0.253 TCGAACAAATGTTCGC 1 YP_003374035.1|HMPREF0424_0817 77 92 + 9.96296 7.88e-06 0.288 TAGAACAAGTGTTCGA 1 YP_003374034.1|uvrA 133 148 - 9.96296 7.88e-06 0.288 TAGAACAAGTGTTCGA 1 YP_003373327.1|HMPREF0424_0056 35 50 - 9.48148 9.32e-06 0.328 ACATACGGCTGTTCCA 1 YP_003374481.1|HMPREF0424_1293 259 274 - 9.33333 9.81e-06 0.333 CCGAACATTCGTGCAA 1 YP_003374221.1|prs_1 77 92 - 8.69136 1.22e-05 0.399 CCAAACATTAGTTCGC 1 HMPREF0424_1379|HMPREF0424_1379 105 120 + 8.07407 1.49e-05 0.455 TAAAACACCTGTCCGG 1 HMPREF0424_1372|HMPREF0424_1372 377 392 + 7.7284 1.67e-05 0.455 ACGAATATTTGTTCCG 1 YP_003373613.1|HMPREF0424_0363 640 655 - 7.7284 1.67e-05 0.455 ACGAATATTTGTTCCG 1 YP_003374368.1|HMPREF0424_1170 253 268 - 7.71605 1.67e-05 0.455 ACGAATATTCGTTCCA 1 YP_003374367.1|rpoB 608 623 + 7.71605 1.67e-05 0.455 ACGAATATTCGTTCCA 1 YP_003374368.1|HMPREF0424_1170 958 973 - 7.7037 1.68e-05 0.455 TCGTACATTTGCTCTA 1 YP_003373495.1|groS 80 95 + 7.5679 1.75e-05 0.463 TAGAACGTAAGTGCGG 1 YP_003374043.1|HMPREF0424_0826 50 65 - 6.8642 2.19e-05 0.533 TAGAACAAACGTTCGA 1 YP_003373502.1|HMPREF0424_0244 92 107 + 6.8642 2.19e-05 0.533 TAGAACAAACGTTCGA 1 YP_003373501.1|HMPREF0424_0243 84 99 - 6.8642 2.19e-05 0.533 TAGAACAAACGTTCGA 1 YP_003374198.1|HMPREF0424_0988 140 155 + 6.64198 2.35e-05 0.557 TCACACGGTTGTTTTA 1 YP_003373406.1|atpB 92 107 + 6.51852 2.44e-05 0.566 TGAAACATATGATCTA 1 YP_003373756.1|HMPREF0424_0515 72 87 - 6.23457 2.66e-05 0.593 TAAAACACTCGTACCA 1 YP_003373565.1|rplI 140 155 - 6.11111 2.77e-05 0.593 CAGCACCCTTGTTCCA 1 YP_003374048.1|HMPREF0424_0831 179 194 - 6.02469 2.85e-05 0.593 ACGTACGGATGTTCCG 1 YP_003373764.1|HMPREF0424_0523 17 32 - 5.98765 2.88e-05 0.593 CAAAACATTTGTTTAA 1 YP_003373597.1|HMPREF0424_0346 38 53 + 5.92593 2.94e-05 0.593 TAAAACGTGAGTTCTA 1 YP_003373596.1|HMPREF0424_0345 621 636 + 5.92593 2.94e-05 0.593 TAAAACGTGAGTTCTA 1 YP_003374444.1|HMPREF0424_1254 703 718 - 5.69136 3.16e-05 0.613 AAGAACGGTTGATTGA 1 YP_003373447.1|pgl 230 245 + 5.67901 3.17e-05 0.613 CAATACGCATGTTCCA 1 YP_003373349.1|dcm_1 336 351 - 4.76543 4.17e-05 0.747 CAGCACATCTGTATCA 1 YP_003373348.1|HMPREF0424_0081 225 240 + 4.76543 4.17e-05 0.747 CAGCACATCTGTATCA 1 YP_003864089.1|HMPREF0424_1209a 370 385 - 4.71605 4.22e-05 0.747 TCAAACGGTTGTTGCA 1 YP_003373980.1|HMPREF0424_0753 101 116 + 4.71605 4.22e-05 0.747 TTATACGTTTGTGCTA 1 YP_003373692.1|HMPREF0424_0447 159 174 - 4.62963 4.33e-05 0.747 TAGAATATTTGTATTA 1 YP_003373691.1|HMPREF0424_0446 87 102 + 4.62963 4.33e-05 0.747 TAGAATATTTGTATTA 1 YP_003373351.1|ppk 2 17 - 4.50617 4.49e-05 0.748 TCAAAAATTTGTACCA 1 YP_003373352.1|HMPREF0424_0085 664 679 - 4.50617 4.49e-05 0.748 TCAAAAATTTGTACCA 1 YP_003374500.1|HMPREF0424_1312 136 151 - 3.93827 5.3e-05 0.805 GAAAATATGTGTTCTA 1 YP_003373747.1|HMPREF0424_0506 53 68 + 3.93827 5.3e-05 0.805 ACGAACCTTTGTGCAG 1 YP_003373808.1|lexA 64 79 - 3.90123 5.36e-05 0.805 TCGAACAAATGTGTCA 1 YP_003373809.1|lysM 79 94 + 3.90123 5.36e-05 0.805 TCGAACAAATGTGTCA 1 YP_003374499.1|HMPREF0424_1311 490 505 - 3.77778 5.55e-05 0.805 ACGTACGTCTTTGCGA 1 YP_003373936.1|HMPREF0424_0709 18 33 - 3.7284 5.63e-05 0.805 GCGAATAATTGTGCGA 1 YP_003374201.1|HMPREF0424_0991 21 36 - 3.7284 5.63e-05 0.805 TAAAACCTCTTTTCGA 1 YP_003374073.1|HMPREF0424_0856 463 478 - 3.67901 5.71e-05 0.805 TGGAAGGTATGTTCCA 1 YP_003373805.1|HMPREF0424_0569 194 209 + 3.66667 5.73e-05 0.805 GCGCACGTAAGTGTGA 1 YP_003373752.1|HMPREF0424_0511 1173 1188 + 3.66667 5.73e-05 0.805 TCGACCATTTGTTGGA 1 YP_003374289.1|prfA 312 327 + 3.55556 5.92e-05 0.805 ACAAACAGCTTTGCGA 1 YP_003373406.1|atpB 92 107 - 3.54321 5.94e-05 0.805 TAGATCATATGTTTCA 1 YP_003374154.1|HMPREF0424_0941 9 24 + 3.54321 5.94e-05 0.805 ACGCACGCATATTCGA 1 YP_003373864.1|HMPREF0424_0633 532 547 - 3.41975 6.15e-05 0.805 ATAAACATATGTTTTA 1 YP_003374221.1|prs_1 240 255 + 3.39506 6.19e-05 0.805 TGAAATGTATGTTCGC 1 YP_003374113.1|fmt 178 193 + 3.37037 6.24e-05 0.805 TAGAAAGCTTGTGCCA 1 YP_003374171.1|HMPREF0424_0961 309 324 + 3.34568 6.28e-05 0.805 TAGAACGCCTAATCGA 1 YP_003373752.1|HMPREF0424_0511 523 538 + 3.25926 6.43e-05 0.814 ATAAACATTAGTTCTA 1 YP_003374009.1|HMPREF0424_0791 187 202 - 3.20988 6.52e-05 0.814 GCGCACACCTTTTCTA 1 YP_003374296.1|HMPREF0424_1095 131 146 + 3.11111 6.71e-05 0.814 GTGAACACATCTTCGA 1 YP_003373522.1|rpsH 253 268 - 3.02469 6.89e-05 0.814 TCCAACGTCTGTCCAA 1 YP_003373786.1|cysK 331 346 - 2.85185 7.23e-05 0.814 GCAAACATCATTTCGA 1 YP_003373637.1|HMPREF0424_0387 79 94 + 2.85185 7.23e-05 0.814 GAGAGCGTATGTTTGA 1 YP_003373787.1|HMPREF0424_0550 310 325 + 2.85185 7.23e-05 0.814 GCAAACATCATTTCGA 1 YP_003373515.1|rplB 101 116 - 2.83951 7.25e-05 0.814 TAGAACGCGTGATCTC 1 YP_003373652.1|HMPREF0424_0403 240 255 + 2.76543 7.4e-05 0.814 GCGAAGGCATGTTCAA 1 YP_003374323.1|nrdG 324 339 + 2.76543 7.4e-05 0.814 GCGAACGCATGAGTCA 1 YP_003373277.1|ahpC 428 443 - 2.7284 7.48e-05 0.814 AAGAACATCAGTATCA 1 YP_003373295.1|HMPREF0424_0024 291 306 + 2.71605 7.5e-05 0.814 GAGAACAGTTCTTCGC 1 YP_003374491.1|HMPREF0424_1303 82 97 - 2.65432 7.63e-05 0.814 GCAAACGTTTGTTTGT 1 YP_003374492.1|HMPREF0424_1304 206 221 + 2.65432 7.63e-05 0.814 GCAAACGTTTGTTTGT 1 YP_003373822.1|whiB 267 282 + 2.65432 7.63e-05 0.814 TGGTACAGCAGTTCAA 1 YP_003373585.1|HMPREF0424_0331 324 339 + 2.55556 7.84e-05 0.827 AAGCACTTCTGTTCTA 1 YP_003373488.1|rplL 180 195 + 2.41975 8.15e-05 0.835 TCGAAGATAAGTTTGA 1 YP_003373860.1|guaA 48 63 - 2.39506 8.21e-05 0.835 TAATACATTTGTTTTC 1 YP_003373859.1|xfp 321 336 + 2.39506 8.21e-05 0.835 TAATACATTTGTTTTC 1 YP_003373589.1|rpmF 215 230 - 2.35802 8.3e-05 0.835 GAGAACCGCAGTTCGG 1 YP_003373307.1|HMPREF0424_0036 305 320 + 2.33333 8.35e-05 0.835 TCACACAGTTGCTCCA 1 YP_003373932.1|hup 240 255 + 2.08642 8.95e-05 0.885 TCGCACAGAAGTCCAA 1 YP_003373651.1|HMPREF0424_0402 211 226 - 1.98765 9.19e-05 0.896 TCATACATCTTTTTGA 1 YP_003374379.1|HMPREF0424_1182 113 128 - 1.95062 9.28e-05 0.896 ATAAACGCCTGTTTCA 1 YP_003373755.1|HMPREF0424_0514 204 219 - 1.92593 9.34e-05 0.896 CAGAAGATCTGTACTA 1 YP_003374456.1|HMPREF0424_1266 96 111 - 1.87654 9.47e-05 0.899 AAGTACAGACGTGCCA 1 YP_003374315.1|dnaE 69 84 + 1.79012 9.69e-05 0.902 TCGTACATTTGCACAA 1 YP_003373941.1|HMPREF0424_0714 165 180 - 1.76543 9.76e-05 0.902 AGGTACAGCTGATCCA 1 YP_003373866.1|HMPREF0424_0636 200 215 - 1.75309 9.79e-05 0.902 CAGAACCCGTGTGTGA 1 HMPREF0424_1400|HMPREF0424_1400 73 88 - 1.71605 9.89e-05 0.903 TCGAACAGCCGAGTCA