RID: 14ZARHJD016
Job Title:RecName: Full=mRNA-capping enzyme nsP1;EC=2.1.1.-...
Program: BLASTP
Query: RecName: Full=mRNA-capping enzyme nsP1;EC=2.1.1.- {ECO:0000250|UniProtKB:P27282};EC=2.7.7.- {ECO:0000250|UniProtKB:P03317}; AltName: Full=Non-structural protein 1; ID: lcl|Query_3325133(amino acid) Length: 539
Database: swissprot Non-redundant UniProtKB/SwissProt sequences
Sequences producing significant alignments:
Scientific Common Max Total Query E Per. Acc.
Description Name Name Taxid Score Score cover Value Ident Len Accession
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Aura virus NA 44158 1126 1126 100% 0.0 100.00 2499 Q86924.3
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Ockelbo virus NA 31699 876 876 100% 0.0 76.30 2515 P27283.2
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Sindbis virus NA 11034 872 872 100% 0.0 75.74 2513 P03317.2
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Semliki Fore... NA 11033 719 719 99% 0.0 62.99 2432 P08411.2
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Getah virus NA 59300 692 692 87% 0.0 67.16 2467 Q5Y389.3
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Sagiyama virus NA 59303 691 691 87% 0.0 67.16 2467 Q9JGL0.3
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Ross river v... NA 11031 681 681 99% 0.0 60.63 2480 P13887.2
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Mayaro virus... NA 374990 679 679 99% 0.0 60.93 2437 Q8QZ73.3
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... O'nyong-nyon... NA 11028 674 674 99% 0.0 60.45 2514 P13886.2
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... O'nyong-nyon... NA 374989 672 672 99% 0.0 60.26 2513 O90368.1
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Igbo Ora virus NA 79899 671 671 99% 0.0 60.07 2513 O90370.1
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Chikungunya ... NA 371095 665 665 99% 0.0 61.12 2474 Q5XXP4.1
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Venezuelan e... NA 11038 658 658 100% 0.0 58.67 2493 P27282.3
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Chikungunya ... NA 371094 657 657 99% 0.0 60.52 2474 Q8JUX6.1
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Venezuelan e... NA 36385 657 657 96% 0.0 59.96 2493 P36328.2
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Venezuelan e... NA 36382 656 656 100% 0.0 58.30 2485 P36327.3
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Barmah Fores... NA 11020 650 650 96% 0.0 59.54 2411 P87515.3
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Venezuelan e... NA 36384 649 649 100% 0.0 56.88 2499 Q9WJC7.3
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Western equi... NA 11039 647 647 100% 0.0 60.00 2467 P13896.3
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Venezuelan e... NA 11036 646 646 100% 0.0 56.51 2497 Q8V294.3
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Eastern equi... NA 374598 644 644 100% 0.0 59.59 2494 Q4QXJ8.3
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Eastern equi... NA 374597 643 643 100% 0.0 59.44 2474 Q306W8.3
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Eastern equi... NA 374596 640 640 100% 0.0 59.44 2471 Q306W6.3
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Sleeping dis... NA 78540 407 407 98% 2e-126 42.96 2593 Q8QL53.1
RecName: Full=Polyprotein P1234; Short=P1234; AltName:... Salmon pancr... NA 84589 405 405 95% 8e-126 42.75 2601 Q8JJX1.1
Alignments:
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Aura virus]
Sequence ID: Q86924.3 Length: 2499
Range 1: 1 to 539
Score:1126 bits(2912), Expect:0.0,
Method:Compositional matrix adjust.,
Identities:539/539(100%), Positives:539/539(100%), Gaps:0/539(0%)
Query 1 MEKPTVHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTS 60
MEKPTVHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTS
Sbjct 1 MEKPTVHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTS 60
Query 61 VTILDIGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLAD 120
VTILDIGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLAD
Sbjct 61 VTILDIGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLAD 120
Query 121 LKSVLESPDAETGTICFHNDVICRTTAEVSVMQNVYINAPSTIYHQALKGVRKLYWIGFD 180
LKSVLESPDAETGTICFHNDVICRTTAEVSVMQNVYINAPSTIYHQALKGVRKLYWIGFD
Sbjct 121 LKSVLESPDAETGTICFHNDVICRTTAEVSVMQNVYINAPSTIYHQALKGVRKLYWIGFD 180
Query 181 TTQFMFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTNV 240
TTQFMFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTNV
Sbjct 181 TTQFMFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTNV 240
Query 241 YFSVGSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITGR 300
YFSVGSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITGR
Sbjct 241 YFSVGSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITGR 300
Query 301 VNRYTVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKLL 360
VNRYTVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKLL
Sbjct 301 VNRYTVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKLL 360
Query 361 VGLNQRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFGC 420
VGLNQRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFGC
Sbjct 361 VGLNQRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFGC 420
Query 421 LWAFKTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLLVKKTNKP 480
LWAFKTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLLVKKTNKP
Sbjct 421 LWAFKTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLLVKKTNKP 480
Query 481 VVTITDTAVKNAQEAYNEAVETAEAEEKAKALPPLKPTAPPVAEDVKCEVTDLVDDAGA 539
VVTITDTAVKNAQEAYNEAVETAEAEEKAKALPPLKPTAPPVAEDVKCEVTDLVDDAGA
Sbjct 481 VVTITDTAVKNAQEAYNEAVETAEAEEKAKALPPLKPTAPPVAEDVKCEVTDLVDDAGA 539
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Ockelbo virus]
Sequence ID: P27283.2 Length: 2515
Range 1: 1 to 540
Score:876 bits(2264), Expect:0.0,
Method:Compositional matrix adjust.,
Identities:412/540(76%), Positives:462/540(85%), Gaps:1/540(0%)
Query 1 MEKPTVHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTS 60
MEKP V+VDVDPQSPFV+QLQKSFPQFE+VAQQ TPNDHANARAFSHLASKLIE E+PT+
Sbjct 1 MEKPVVNVDVDPQSPFVVQLQKSFPQFEVVAQQATPNDHANARAFSHLASKLIELEVPTT 60
Query 61 VTILDIGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLAD 120
TILDIGSAPARRM+SEH+YHCVCPMRSPEDPDR+M YAS+LA+KA +ITNK LH+K+ D
Sbjct 61 ATILDIGSAPARRMFSEHQYHCVCPMRSPEDPDRMMKYASKLAEKACKITNKNLHEKIKD 120
Query 121 LKSVLESPDAETGTICFHNDVICRTTAEVSVMQNVYINAPSTIYHQALKGVRKLYWIGFD 180
L++VL++PDAET ++CFHNDV C T AE SVMQ+VYINAP TIYHQA+KGVR LYWIGFD
Sbjct 121 LRTVLDTPDAETPSLCFHNDVTCNTRAEYSVMQDVYINAPGTIYHQAMKGVRTLYWIGFD 180
Query 181 TTQFMFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTNV 240
TTQFMFS+MAGSYP+YNTNWADE+VLEARNIGLCSTKL EG GKLS RKK LKPG+ V
Sbjct 181 TTQFMFSAMAGSYPAYNTNWADEKVLEARNIGLCSTKLSEGRTGKLSIMRKKELKPGSRV 240
Query 241 YFSVGSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITGR 300
YFSVGSTLYPE+RA LQSWHLPSVFHLKGKQS+TCRCDT V+CEGYVVKKITISPGITG
Sbjct 241 YFSVGSTLYPEHRASLQSWHLPSVFHLKGKQSYTCRCDTVVSCEGYVVKKITISPGITGE 300
Query 301 VNRYTVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKLL 360
Y VTNNSEGFLLCK+TDTVKGERVSFPVCTYIP +ICDQMTGI+ATDI P+DAQKLL
Sbjct 301 TVGYAVTNNSEGFLLCKVTDTVKGERVSFPVCTYIPATICDQMTGIMATDISPDDAQKLL 360
Query 361 VGLNQRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFGC 420
VGLNQRIV+NGKTNRNTNTMQNYLLP +A G SKWAKERK D +EK L RERKL +GC
Sbjct 361 VGLNQRIVINGKTNRNTNTMQNYLLPTIAQGFSKWAKERKEDLDNEKMLGTRERKLTYGC 420
Query 421 LWAFKTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLLVKKTNKP 480
LWAF+TKK+HSFYRPPGTQT VKV A FSAFPMSSVWTTSLPMSLRQK+KL L K +
Sbjct 421 LWAFRTKKVHSFYRPPGTQTSVKVPASFSAFPMSSVWTTSLPMSLRQKMKLALQPKKEEK 480
Query 481 VVTITDTAVKNAQEAYNEAVETAEAEEKAKALPPLKPTAP-PVAEDVKCEVTDLVDDAGA 539
++ + + V A+ A+ +A E A AE+ +ALPPL A +V CEV L D GA
Sbjct 481 LLQVPEELVMEAKAAFEDAQEEARAEKLREALPPLVADKDIEAAAEVVCEVEGLQADIGA 540
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; AltName: Full=p270 nonstructural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Sindbis virus]
Sequence ID: P03317.2 Length: 2513
Range 1: 1 to 540
Score:872 bits(2254), Expect:0.0,
Method:Compositional matrix adjust.,
Identities:409/540(76%), Positives:462/540(85%), Gaps:1/540(0%)
Query 1 MEKPTVHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTS 60
MEKP V+VDVDPQSPFV+QLQKSFPQFE+VAQQVTPNDHANARAFSHLASKLIE E+PT+
Sbjct 1 MEKPVVNVDVDPQSPFVVQLQKSFPQFEVVAQQVTPNDHANARAFSHLASKLIELEVPTT 60
Query 61 VTILDIGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLAD 120
TILDIGSAPARRM+SEH+YHCVCPMRSPEDPDR+M YAS+LA+KA +ITNK LH+K+ D
Sbjct 61 ATILDIGSAPARRMFSEHQYHCVCPMRSPEDPDRMMKYASKLAEKACKITNKNLHEKIKD 120
Query 121 LKSVLESPDAETGTICFHNDVICRTTAEVSVMQNVYINAPSTIYHQALKGVRKLYWIGFD 180
L++VL++PDAET ++CFHNDV C AE SVMQ+VYINAP TIYHQA+KGVR LYWIGFD
Sbjct 121 LRTVLDTPDAETPSLCFHNDVTCNMRAEYSVMQDVYINAPGTIYHQAMKGVRTLYWIGFD 180
Query 181 TTQFMFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTNV 240
TTQFMFS+MAGSYP+YNTNWADE+VLEARNIGLCSTKL EG GKLS RKK LKPG+ V
Sbjct 181 TTQFMFSAMAGSYPAYNTNWADEKVLEARNIGLCSTKLSEGRTGKLSIMRKKELKPGSRV 240
Query 241 YFSVGSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITGR 300
YFSVGSTLYPE+RA LQSWHLPSVFHL GKQS+TCRCDT V+CEGYVVKKITISPGITG
Sbjct 241 YFSVGSTLYPEHRASLQSWHLPSVFHLNGKQSYTCRCDTVVSCEGYVVKKITISPGITGE 300
Query 301 VNRYTVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKLL 360
Y VT+NSEGFLLCK+TDTVKGERVSFPVCTYIP +ICDQMTGI+ATDI P+DAQKLL
Sbjct 301 TVGYAVTHNSEGFLLCKVTDTVKGERVSFPVCTYIPATICDQMTGIMATDISPDDAQKLL 360
Query 361 VGLNQRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFGC 420
VGLNQRIV+NG+TNRNTNTMQNYLLP +A G SKWAKERK D +EK L RERKL +GC
Sbjct 361 VGLNQRIVINGRTNRNTNTMQNYLLPIIAQGFSKWAKERKDDLDNEKMLGTRERKLTYGC 420
Query 421 LWAFKTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLLVKKTNKP 480
LWAF+TKK+HSFYRPPGTQT VKV A FSAFPMSSVWTTSLPMSLRQK+KL L K +
Sbjct 421 LWAFRTKKVHSFYRPPGTQTCVKVPASFSAFPMSSVWTTSLPMSLRQKLKLALQPKKEEK 480
Query 481 VVTITDTAVKNAQEAYNEAVETAEAEEKAKALPPL-KPTAPPVAEDVKCEVTDLVDDAGA 539
++ +++ V A+ A+ +A E A AE+ +ALPPL A +V CEV L D GA
Sbjct 481 LLQVSEELVMEAKAAFEDAQEEARAEKLREALPPLVADKGIEAAAEVVCEVEGLQADIGA 540
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Semliki Forest virus]
Sequence ID: P08411.2 Length: 2432
Range 1: 5 to 537
Score:719 bits(1855), Expect:0.0,
Method:Compositional matrix adjust.,
Identities:337/535(63%), Positives:417/535(77%), Gaps:3/535(0%)
Query 6 VHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTSVTILD 65
VHVD++ SPF+ LQK+FP FE+ + QVTPNDHANARAFSHLA+KLIE E ILD
Sbjct 5 VHVDIEADSPFIKSLQKAFPSFEVESLQVTPNDHANARAFSHLATKLIEQETDKDTLILD 64
Query 66 IGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLADLKSVL 125
IGSAP+RRM S HKYHCVCPMRS EDP+RL+ YA +LA +G++ ++ + K+ DL++V+
Sbjct 65 IGSAPSRRMMSTHKYHCVCPMRSAEDPERLVCYAKKLAAASGKVLDREIAGKITDLQTVM 124
Query 126 ESPDAETGTICFHNDVICRTTAEVSVMQNVY-INAPSTIYHQALKGVRKLYWIGFDTTQF 184
+PDAE+ T C H DV CRT AEV+V Q+VY ++AP+++YHQA+KGVR YWIGFDTT F
Sbjct 125 ATPDAESPTFCLHTDVTCRTAAEVAVYQDVYAVHAPTSLYHQAMKGVRTAYWIGFDTTPF 184
Query 185 MFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTNVYFSV 244
MF ++AG+YP+Y TNWADE+VL+ARNIGLC+ L EG +GKLS RKK LKP V FSV
Sbjct 185 MFDALAGAYPTYATNWADEQVLQARNIGLCAASLTEGRLGKLSILRKKQLKPCDTVMFSV 244
Query 245 GSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITGRVNRY 304
GSTLY E+R L+SWHLPSVFHLKGKQSFTCRCDT V+CEGYVVKKIT+ PG+ G+ Y
Sbjct 245 GSTLYTESRKLLRSWHLPSVFHLKGKQSFTCRCDTIVSCEGYVVKKITMCPGLYGKTVGY 304
Query 305 TVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKLLVGLN 364
VT ++EGFL+CK TDTVKGERVSFPVCTY+P +ICDQMTGILATD+ PEDAQKLLVGLN
Sbjct 305 AVTYHAEGFLVCKTTDTVKGERVSFPVCTYVPSTICDQMTGILATDVTPEDAQKLLVGLN 364
Query 365 QRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFGCLWAF 424
QRIVVNG+T RNTNTM+NYLLP VA SKWA+E KAD DEKPL VRER L CLWAF
Sbjct 365 QRIVVNGRTQRNTNTMKNYLLPIVAVAFSKWAREYKADLDDEKPLGVRERSLTCCCLWAF 424
Query 425 KTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLLVKKTNKPVVTI 484
KT+K+H+ Y+ P TQTIVKV +EF++F + S+W+T L + +R ++K+LL KKT + ++ +
Sbjct 425 KTRKMHTMYKKPDTQTIVKVPSEFNSFVIPSLWSTGLAIPVRSRIKMLLAKKTKRELIPV 484
Query 485 TDTAVKNAQEAYNEAVETAEAEEKAKALPPLKPTAPPVAEDVKCEVTDLVDDAGA 539
D + +A++A E E EAE +ALPPL P AP V +V +L AGA
Sbjct 485 LDAS--SARDAEQEEKERLEAELTREALPPLVPIAPAETGVVDVDVEELEYHAGA 537
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Getah virus]
Sequence ID: Q5Y389.3 Length: 2467
Range 1: 3 to 471
Score:692 bits(1785), Expect:0.0,
Method:Compositional matrix adjust.,
Identities:315/469(67%), Positives:383/469(81%), Gaps:1/469(0%)
Query 6 VHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTSVTILD 65
V VDV+ SPF+ LQK+FP FE+ +QQVTPNDHANARAFSHLA+KLIE E+PT VTILD
Sbjct 3 VTVDVEADSPFLKALQKAFPAFEVESQQVTPNDHANARAFSHLATKLIEQEVPTGVTILD 62
Query 66 IGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLADLKSVL 125
+GSAPARR+ S+H YHC+CPM+S EDP+RL NYA +LA +G + +K + K+ DL+ V+
Sbjct 63 VGSAPARRLMSDHTYHCICPMKSAEDPERLANYARKLAKASGTVLDKNVSGKITDLQDVM 122
Query 126 ESPDAETGTICFHNDVICRTTAEVSVMQNVY-INAPSTIYHQALKGVRKLYWIGFDTTQF 184
+PD E+ T C H D CRT AEV+V Q+VY ++AP+++YHQA+KGVR YWIGFDTT F
Sbjct 123 ATPDLESPTFCLHTDETCRTRAEVAVYQDVYAVHAPTSLYHQAIKGVRTAYWIGFDTTPF 182
Query 185 MFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTNVYFSV 244
MF ++AG+YP+Y+TNWADE+VL+ARNIGLC+T L EG GKLS RKK L+P V FSV
Sbjct 183 MFEALAGAYPAYSTNWADEQVLQARNIGLCATGLSEGRRGKLSIMRKKCLRPSDRVMFSV 242
Query 245 GSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITGRVNRY 304
GSTLY E+R L+SWHLPSVFHLKGK SFTCRCDT V+CEGYVVKKITISPGI G+ Y
Sbjct 243 GSTLYTESRKLLRSWHLPSVFHLKGKNSFTCRCDTVVSCEGYVVKKITISPGIYGKTVDY 302
Query 305 TVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKLLVGLN 364
VT+++EGFL+CKITDTV+GERVSFPVCTY+P +ICDQMTGILATD+ PEDAQKLLVGLN
Sbjct 303 AVTHHAEGFLMCKITDTVRGERVSFPVCTYVPATICDQMTGILATDVTPEDAQKLLVGLN 362
Query 365 QRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFGCLWAF 424
QRIVVNG+T RNTNTM+NYLLP VA SKWA+E +AD DEKPL RER L CLWAF
Sbjct 363 QRIVVNGRTQRNTNTMKNYLLPVVAQAFSKWAREARADMEDEKPLGTRERTLTCCCLWAF 422
Query 425 KTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLL 473
K+ KIH+ Y+ P TQTIVKV + F +F + S+W++SL M +RQ++KLLL
Sbjct 423 KSHKIHTMYKRPETQTIVKVPSTFDSFVIPSLWSSSLSMGIRQRIKLLL 471
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Sagiyama virus]
Sequence ID: Q9JGL0.3 Length: 2467
Range 1: 3 to 471
Score:691 bits(1784), Expect:0.0,
Method:Compositional matrix adjust.,
Identities:315/469(67%), Positives:383/469(81%), Gaps:1/469(0%)
Query 6 VHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTSVTILD 65
V VDV+ SPF+ LQK+FP FE+ +QQVTPNDHANARAFSHLA+KLIE E+PT VTILD
Sbjct 3 VTVDVEADSPFLKALQKAFPAFEVESQQVTPNDHANARAFSHLATKLIEQEVPTGVTILD 62
Query 66 IGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLADLKSVL 125
+GSAPARR+ S+H YHC+CPM+S EDP+RL NYA +LA +G + +K + K+ DL+ V+
Sbjct 63 VGSAPARRLMSDHTYHCICPMKSAEDPERLANYARKLAKASGTVLDKNVSGKITDLQDVM 122
Query 126 ESPDAETGTICFHNDVICRTTAEVSVMQNVY-INAPSTIYHQALKGVRKLYWIGFDTTQF 184
+PD E+ T C H D CRT AEV+V Q+VY ++AP+++YHQA+KGVR YWIGFDTT F
Sbjct 123 ATPDLESPTFCLHTDETCRTRAEVAVYQDVYAVHAPTSLYHQAIKGVRTAYWIGFDTTPF 182
Query 185 MFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTNVYFSV 244
MF ++AG+YP+Y+TNWADE+VL+ARNIGLC+T L EG GKLS RKK L+P V FSV
Sbjct 183 MFEALAGAYPAYSTNWADEQVLQARNIGLCATGLSEGRRGKLSIMRKKCLRPSDRVMFSV 242
Query 245 GSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITGRVNRY 304
GSTLY E+R L+SWHLPSVFHLKGK SFTCRCDT V+CEGYVVKKITISPGI G+ Y
Sbjct 243 GSTLYTESRKLLRSWHLPSVFHLKGKNSFTCRCDTVVSCEGYVVKKITISPGIYGKTVDY 302
Query 305 TVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKLLVGLN 364
VT+++EGFL+CKITDTV+GERVSFPVCTY+P +ICDQMTGILATD+ PEDAQKLLVGLN
Sbjct 303 AVTHHAEGFLVCKITDTVRGERVSFPVCTYVPATICDQMTGILATDVTPEDAQKLLVGLN 362
Query 365 QRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFGCLWAF 424
QRIVVNG+T RNTNTM+NYLLP VA SKWA+E +AD DEKPL RER L CLWAF
Sbjct 363 QRIVVNGRTQRNTNTMKNYLLPVVAQAFSKWAREARADMEDEKPLGTRERTLTCCCLWAF 422
Query 425 KTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLL 473
K+ KIH+ Y+ P TQTIVKV + F +F + S+W++SL M +RQ++KLLL
Sbjct 423 KSHKIHTMYKRPETQTIVKVPSTFDSFVIPSLWSSSLSMGIRQRIKLLL 471
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Ross river virus (STRAIN NB5092)]
Sequence ID: P13887.2 Length: 2480
Range 1: 3 to 533
Score:681 bits(1757), Expect:0.0,
Method:Compositional matrix adjust.,
Identities:325/536(61%), Positives:406/536(75%), Gaps:7/536(1%)
Query 6 VHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTSVTILD 65
V VDV+ SPF+ LQK+FP FE+ +QQVTPNDHANARAFSHLA+KLIE E+P ++TILD
Sbjct 3 VTVDVEADSPFLKALQKAFPAFEVESQQVTPNDHANARAFSHLATKLIEQEVPANITILD 62
Query 66 IGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLADLKSVL 125
+GSAPARR+ S+H YHC+CPM+S EDP+RL NYA +LA AGE+ +K + K+ DL+ V+
Sbjct 63 VGSAPARRLMSDHSYHCICPMKSAEDPERLANYARKLAKTAGEVLDKNVSGKITDLQDVM 122
Query 126 ESPDAETGTICFHNDVICRTTAEVSVMQNVYINAPSTIYHQALKGVRKLYWIGFDTTQFM 185
+PD E+ T C H D CRT AEV+V Q+V +AP+++YHQA+KGVR +YWIGFDTT FM
Sbjct 123 ATPDLESPTFCLHTDETCRTRAEVAVYQDVXXHAPTSLYHQAMKGVRTVYWIGFDTTPFM 182
Query 186 FSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTNVYFSVG 245
F +AG+YP+Y+TNWADE+VL+ARNIGLC+T L EG GK+S RKK L+P FSVG
Sbjct 183 FEVVAGAYPTYSTNWADEQVLQARNIGLCATSLSEGHRGKISIMRKKRLRPSDRXMFSVG 242
Query 246 STLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITGRVNRYT 305
TLY E+R L+SWHLPSVFHLKGK SFTCRCDT V+CEGYVVKKIT+SPG G+ Y
Sbjct 243 XTLYIESRRLLKSWHLPSVFHLKGKNSFTCRCDTIVSCEGYVVKKITMSPGTYGKTVGYA 302
Query 306 VTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKLLVGLNQ 365
VT+++EGFL+CK+TDTV+GERVSFPVCTY+P +ICDQMTGILATD+ PEDAQKLLVGLNQ
Sbjct 303 VTHHAEGFLMCKVTDTVRGERVSFPVCTYVPATICDQMTGILATDVTPEDAQKLLVGLNQ 362
Query 366 RIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFGCLWAFK 425
RIVVNG+T RNTNTM+NYLLP VA SKWA+E KAD DEKPL RER L CLWAFK
Sbjct 363 RIVVNGRTQRNTNTMKNYLLPVVAQAFSKWAREAKADMEDEKPLGTRERTLTCCCLWAFK 422
Query 426 TKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLLVKKTNKPVVTIT 485
K H+ Y+ P TQTIVKV + F +F + S+W++SL + +RQ++KLLL K ++ +
Sbjct 423 NHKTHTMYKRPDTQTIVKVPSTFDSFVIPSLWSSSLSIGIRQRIKLLLGPKLSRDLPYSG 482
Query 486 DTAVKNAQEAYNEAVETAEAEEKAK-ALPPLKPTAPPVAEDV-KCEVTDLVDDAGA 539
D +N + E + E + ALPPL A+DV + +V +L AGA
Sbjct 483 D---RNEAREAEKEAEETKEAELTREALPPL--VGSNCADDVDQVDVEELTYRAGA 533
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Mayaro virus (strain Brazil)]
Sequence ID: Q8QZ73.3 Length: 2437
Range 1: 4 to 536
Score:679 bits(1753), Expect:0.0,
Method:Compositional matrix adjust.,
Identities:326/535(61%), Positives:411/535(76%), Gaps:3/535(0%)
Query 6 VHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTSVTILD 65
V VD++ +SPF+ LQ++FP FE+ AQQVTPNDHANARAFSHLA+KLIE E ILD
Sbjct 4 VFVDIEAESPFLKSLQRAFPAFEVEAQQVTPNDHANARAFSHLATKLIEQETEKDTLILD 63
Query 66 IGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLADLKSVL 125
IGSAPARRM SEH YHCVCPMRS EDP+RL+ YA +LA +GE+ ++ + K+ DL+SV+
Sbjct 64 IGSAPARRMMSEHTYHCVCPMRSAEDPERLLYYARKLAKASGEVVDRNIAAKIDDLQSVM 123
Query 126 ESPDAETGTICFHNDVICRTTAEVSVMQNVY-INAPSTIYHQALKGVRKLYWIGFDTTQF 184
+PD E+ T C H D CRT AEV+V Q+VY ++AP+++Y QA+KGVR YWIGFDTT F
Sbjct 124 ATPDNESRTFCLHTDQTCRTQAEVAVYQDVYAVHAPTSLYFQAMKGVRTAYWIGFDTTPF 183
Query 185 MFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTNVYFSV 244
MF +MAG+YP+Y TNWADE+VL+ARNIGLCS L EG +GKLS RKK + P + FSV
Sbjct 184 MFDTMAGAYPTYATNWADEQVLKARNIGLCSASLTEGHLGKLSIMRKKKMTPSDQIMFSV 243
Query 245 GSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITGRVNRY 304
GSTLY E+R L+SWHLPSVFHLKG+QS+TCRCDT V+CEGYVVKKIT+SPG+ G+ + Y
Sbjct 244 GSTLYIESRRLLKSWHLPSVFHLKGRQSYTCRCDTIVSCEGYVVKKITMSPGVFGKTSGY 303
Query 305 TVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKLLVGLN 364
VT+++EGFL+CK TDT+ GERVSFP+CTY+P +ICDQMTGILAT++ PEDAQKLLVGLN
Sbjct 304 AVTHHAEGFLVCKTTDTIAGERVSFPICTYVPSTICDQMTGILATEVTPEDAQKLLVGLN 363
Query 365 QRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFGCLWAF 424
QRIVVNG+T RNTNTM+NYLLP V+ SKWAKE + D DEK + +RER L CLWAF
Sbjct 364 QRIVVNGRTQRNTNTMKNYLLPVVSQAFSKWAKEYRLDQEDEKNMGMRERTLTCCCLWAF 423
Query 425 KTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLLVKKTNKPVVTI 484
KT K H+ Y+ P TQTIVKV +EF++F + S+W+ L + +R +++LLL + +P+V
Sbjct 424 KTHKNHTMYKKPDTQTIVKVPSEFNSFVIPSLWSAGLSIGIRHRIRLLLQSRRVEPLVPS 483
Query 485 TDTAVKNAQEAYNEAVETAEAEEKAKALPPLKPTAPPVAEDVKCEVTDLVDDAGA 539
D V A+ A EA E EAE+ ALPPL PTAP + + + +V +L AGA
Sbjct 484 MD--VGEARAAEREAAEAKEAEDTLAALPPLIPTAPVLDDIPEVDVEELEFRAGA 536
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [O'nyong-nyong virus strain Gulu]
Sequence ID: P13886.2 Length: 2514
Range 1: 3 to 535
Score:674 bits(1740), Expect:0.0,
Method:Compositional matrix adjust.,
Identities:324/536(60%), Positives:404/536(75%), Gaps:4/536(0%)
Query 5 TVHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTSVTIL 64
+V+VD+D S F+ LQ+++P FE+ +QVTPNDHANARAFSHLA KLIE EI TIL
Sbjct 3 SVYVDIDADSAFLKALQQAYPMFEVEPKQVTPNDHANARAFSHLAIKLIEQEIDPDSTIL 62
Query 65 DIGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLADLKSV 124
DIGSAPARRM S+ KYHCVCPMRS EDP+RL NYA +LA AG++T+K + K+ DL++V
Sbjct 63 DIGSAPARRMMSDRKYHCVCPMRSAEDPERLANYARKLASAAGKVTDKNISGKINDLQAV 122
Query 125 LESPDAETGTICFHNDVICRTTAEVSVMQNVY-INAPSTIYHQALKGVRKLYWIGFDTTQ 183
+ P+ ET T C H D C+ +V++ Q+VY ++AP+++YHQA+KGVR YWIGFDTT
Sbjct 123 MAVPNMETSTFCLHTDATCKQRGDVAIYQDVYAVHAPTSLYHQAIKGVRVAYWIGFDTTP 182
Query 184 FMFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTNVYFS 243
FM+++MAG+YPSY+TNWADE+VL+A+NIGLCST L EG GKLS R K LKP V FS
Sbjct 183 FMYNAMAGAYPSYSTNWADEQVLKAKNIGLCSTDLSEGRRGKLSIMRGKKLKPCDRVLFS 242
Query 244 VGSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITGRVNR 303
VGSTLYPE+R LQSWHLPSVFHLKGK SFTCRCDT V+CEGYVVK++T+SPGI G+ +
Sbjct 243 VGSTLYPESRKLLQSWHLPSVFHLKGKLSFTCRCDTIVSCEGYVVKRVTMSPGIYGKTSG 302
Query 304 YTVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKLLVGL 363
Y VT+++ GFL+CK TDTV GERVSF VCTY+P +ICDQMTGILAT++ PEDAQKLLVGL
Sbjct 303 YAVTHHAGGFLMCKTTDTVDGERVSFSVCTYVPATICDQMTGILATEVTPEDAQKLLVGL 362
Query 364 NQRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFGCLWA 423
NQRIVVNG+T RNTNTM+NYLLP VA SKWAKE + D DEK L VRER L CLWA
Sbjct 363 NQRIVVNGRTQRNTNTMKNYLLPIVAQAFSKWAKECRKDMEDEKLLGVRERTLTCCCLWA 422
Query 424 FKTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLLVKKTNKPVVT 483
F+ K H+ Y+ P TQ+I KV AEF +F + S+W++ L + LR ++K LL K +
Sbjct 423 FRKHKTHTVYKRPDTQSIQKVPAEFDSFVIPSLWSSGLSIPLRTRIKWLLSKAPKYEQLP 482
Query 484 ITDTAVKNAQEAYNEAVETAEAEEKAKALPPLKPTAPPVAEDVKCEVTDLVDDAGA 539
+ A + AQ A +AVE EAE +A+PPL+ T + V+ +V L D AGA
Sbjct 483 HSGNAEEAAQ-AETDAVEEQEAELTREAMPPLQATQDDI--QVEIDVEQLEDRAGA 535
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [O'nyong-nyong virus strain SG650]
Sequence ID: O90368.1 Length: 2513
Range 1: 3 to 535
Score:672 bits(1734), Expect:0.0,
Method:Compositional matrix adjust.,
Identities:323/536(60%), Positives:403/536(75%), Gaps:4/536(0%)
Query 5 TVHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTSVTIL 64
+V+VD+D S F+ LQ+++P FE+ +QVTPNDHANARAFSHLA KLIE EI TIL
Sbjct 3 SVYVDIDADSAFLKALQRAYPMFEVEPKQVTPNDHANARAFSHLAIKLIEQEIDPDSTIL 62
Query 65 DIGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLADLKSV 124
DIG APARRM S+ KYHCVCPMRS EDP+RL NYA +LA AG++T+K + K+ DL++V
Sbjct 63 DIGPAPARRMMSDRKYHCVCPMRSAEDPERLANYARKLASAAGKVTDKNISGKINDLQAV 122
Query 125 LESPDAETGTICFHNDVICRTTAEVSVMQNVY-INAPSTIYHQALKGVRKLYWIGFDTTQ 183
+ P+ ET T C H D C+ +V++ Q+VY ++AP+++YHQA+KGVR YWIGFDTT
Sbjct 123 MAVPNMETSTFCLHTDATCKQRGDVAIYQDVYAVHAPTSLYHQAIKGVRVAYWIGFDTTP 182
Query 184 FMFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTNVYFS 243
FM+++MAG+YPSY+TNWADE+VL+A+NIGLCST L EG GKLS R K LKP V FS
Sbjct 183 FMYNAMAGAYPSYSTNWADEQVLKAKNIGLCSTDLSEGRRGKLSIMRGKKLKPCDRVLFS 242
Query 244 VGSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITGRVNR 303
VGSTLYPE+R LQSWHLPSVFHLKGK SFTCRCDT V+CEGYVVK++T+SPGI G+ +
Sbjct 243 VGSTLYPESRKLLQSWHLPSVFHLKGKLSFTCRCDTIVSCEGYVVKRVTMSPGIYGKTSG 302
Query 304 YTVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKLLVGL 363
Y VT++++GFL+CK TDTV GERVSF VCTY+P +ICDQMTGILAT++ PEDAQKLLVGL
Sbjct 303 YAVTHHADGFLMCKTTDTVDGERVSFSVCTYVPATICDQMTGILATEVTPEDAQKLLVGL 362
Query 364 NQRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFGCLWA 423
NQRIVVNG+T RNTNTM+NYLLP VA SKWAKE + D DEK L VRER L CLWA
Sbjct 363 NQRIVVNGRTQRNTNTMKNYLLPIVAQAFSKWAKECRKDMEDEKLLGVRERTLTCCCLWA 422
Query 424 FKTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLLVKKTNKPVVT 483
F+ K H+ Y+ P TQ+I KV AEF +F + S+W++ L + LR ++K LL K +
Sbjct 423 FRKHKTHTVYKRPDTQSIQKVPAEFDSFVIPSLWSSGLSIPLRTRIKWLLSKAPKHEQLP 482
Query 484 ITDTAVKNAQEAYNEAVETAEAEEKAKALPPLKPTAPPVAEDVKCEVTDLVDDAGA 539
+ A + AQ A +A E EAE +A+PPL+ T V V+ +V L D AGA
Sbjct 483 HSGNAEEAAQ-AEMDAAEEREAELTREAMPPLQATQDDV--QVEIDVEQLEDRAGA 535
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Igbo Ora virus]
Sequence ID: O90370.1 Length: 2513
Range 1: 3 to 535
Score:671 bits(1730), Expect:0.0,
Method:Compositional matrix adjust.,
Identities:322/536(60%), Positives:402/536(75%), Gaps:4/536(0%)
Query 5 TVHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTSVTIL 64
+V+VD+D S F+ LQ+++P FE+ +QVTPNDHANARAFSHLA KLIE EI TIL
Sbjct 3 SVYVDIDADSAFLKALQRAYPMFEVEPKQVTPNDHANARAFSHLAIKLIEQEIDPGSTIL 62
Query 65 DIGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLADLKSV 124
IGSAPARRM S+ KYHCVCPMRS EDP+RL NYA +LA AG++T+K + K+ DL++V
Sbjct 63 GIGSAPARRMMSDRKYHCVCPMRSAEDPERLANYARKLASAAGKVTDKNISGKINDLQAV 122
Query 125 LESPDAETGTICFHNDVICRTTAEVSVMQNVY-INAPSTIYHQALKGVRKLYWIGFDTTQ 183
+ P+ ET T C H D C+ +V++ Q+VY ++AP+++YHQA+KGV YWIGFDTT
Sbjct 123 MAVPNMETSTFCLHTDATCKQRGDVAIYQDVYAVHAPTSLYHQAIKGVHVAYWIGFDTTP 182
Query 184 FMFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTNVYFS 243
FM+++MAG+YPSY+TNWADE+VL+A+NIGLCST L EG GKLS R K KP V FS
Sbjct 183 FMYNAMAGAYPSYSTNWADEQVLKAKNIGLCSTDLSEGRRGKLSIMRGKKFKPCDRVLFS 242
Query 244 VGSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITGRVNR 303
VGSTLYPE+R LQSWHLPSVFHLKGK SFTCRCDT V+CEGYVVK++T+SPGI G+ +
Sbjct 243 VGSTLYPESRKLLQSWHLPSVFHLKGKLSFTCRCDTIVSCEGYVVKRVTMSPGIYGKTSG 302
Query 304 YTVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKLLVGL 363
Y VT++++GFL+CK TDTV GERVSF VCTY+P +ICDQMTGILAT++ PEDAQKLLVGL
Sbjct 303 YAVTHHADGFLMCKTTDTVDGERVSFSVCTYVPATICDQMTGILATEVTPEDAQKLLVGL 362
Query 364 NQRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFGCLWA 423
NQRIVVNG+T RNTNTM+NYLLP VA SKWAKE + D DEK L VRER L CLWA
Sbjct 363 NQRIVVNGRTQRNTNTMKNYLLPIVAQAFSKWAKECRKDMEDEKLLGVRERTLTCCCLWA 422
Query 424 FKTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLLVKKTNKPVVT 483
F+ K H+ Y+ P TQ+I KV AEF +F + S+W++ L + LR ++K LL K +
Sbjct 423 FRKHKTHTVYKRPDTQSIQKVPAEFDSFVIPSLWSSGLSIPLRTRIKWLLSKAPKHEQLP 482
Query 484 ITDTAVKNAQEAYNEAVETAEAEEKAKALPPLKPTAPPVAEDVKCEVTDLVDDAGA 539
+ A + AQ A +AVE EAE +A+PPL+ T V V+ +V L D AGA
Sbjct 483 HSGNAEEAAQ-AETDAVEEREAELTREAMPPLQATQDDV--QVEIDVEQLEDRAGA 535
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Chikungunya virus strain Senegal 37997]
Sequence ID: Q5XXP4.1 Length: 2474
Range 1: 4 to 535
Score:665 bits(1715), Expect:0.0,
Method:Compositional matrix adjust.,
Identities:327/535(61%), Positives:407/535(76%), Gaps:4/535(0%)
Query 6 VHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTSVTILD 65
V+VD+D S F+ LQ+++P FE+ +QVTPNDHANARAFSHLA KLIE EI TILD
Sbjct 4 VYVDIDADSAFLKALQRAYPMFEVEPRQVTPNDHANARAFSHLAIKLIEQEIDPDSTILD 63
Query 66 IGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLADLKSVL 125
IGSAPARRM S+ KYHCVCPMRS EDP+RL NYA +LA AG++ ++ + +K+ DL++V+
Sbjct 64 IGSAPARRMMSDRKYHCVCPMRSAEDPERLANYARKLASAAGKVLDRNISEKIGDLQAVM 123
Query 126 ESPDAETGTICFHNDVICRTTAEVSVMQNVY-INAPSTIYHQALKGVRKLYWIGFDTTQF 184
PDAET T C H DV CR A+V++ Q+VY ++AP+++YHQA+KGVR YWIGFDTT F
Sbjct 124 AVPDAETPTFCLHTDVSCRQRADVAIYQDVYAVHAPTSLYHQAIKGVRVAYWIGFDTTPF 183
Query 185 MFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTNVYFSV 244
M+++MAG+YPSY+TNWADE+VL+A+NIGLCST L EG GKLS R K +KP V FSV
Sbjct 184 MYNAMAGAYPSYSTNWADEQVLKAKNIGLCSTDLTEGRRGKLSIMRGKKMKPCDRVLFSV 243
Query 245 GSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITGRVNRY 304
GSTLYPE+R L+SWHLPSVFHLKGK SFTCRCDT V+CEGYVVK+ITISPG+ G+ Y
Sbjct 244 GSTLYPESRKLLKSWHLPSVFHLKGKLSFTCRCDTVVSCEGYVVKRITISPGLYGKTTGY 303
Query 305 TVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKLLVGLN 364
VT++++GFL+CK TDTV GERVSF VCTY+P +ICDQMTGILAT++ PEDAQKLLVGLN
Sbjct 304 AVTHHADGFLMCKTTDTVDGERVSFSVCTYVPATICDQMTGILATEVTPEDAQKLLVGLN 363
Query 365 QRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFGCLWAF 424
QRIVVNG+T RNTNTM+NYLLP VA SKWAKE + D DEK L +RER L CLWAF
Sbjct 364 QRIVVNGRTQRNTNTMKNYLLPVVAQAFSKWAKECRKDMEDEKLLGIRERTLTCCCLWAF 423
Query 425 KTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLLVKKTNKPVVTI 484
K +K H+ Y+ P TQ+I KV AEF +F + S+W++ L + LR ++K LL K ++
Sbjct 424 KKQKTHTVYKRPDTQSIQKVPAEFDSFVVPSLWSSGLSIPLRTRIKWLLSKVPKTDLIPY 483
Query 485 TDTAVKNAQEAYNEAVETAEAEEKAKALPPLKPTAPPVAEDVKCEVTDLVDDAGA 539
+ A K A++A EA E EAE +ALPPL+ V V+ +V L D AGA
Sbjct 484 SGDA-KEARDAEKEAEEEREAELTREALPPLQAAQDDV--QVEIDVEQLEDRAGA 535
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Venezuelan equine encephalitis virus (strain Trinidad donkey)]
Sequence ID: P27282.3 Length: 2493
Range 1: 1 to 535
Score:658 bits(1697), Expect:0.0,
Method:Compositional matrix adjust.,
Identities:318/542(59%), Positives:405/542(74%), Gaps:10/542(1%)
Query 1 MEKPTVHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTS 60
MEK VHVD++ SPF+ LQ+SFPQFE+ A+QVT NDHANARAFSHLASKLIE E+ S
Sbjct 1 MEK--VHVDIEEDSPFLRALQRSFPQFEVEAKQVTDNDHANARAFSHLASKLIETEVDPS 58
Query 61 VTILDIGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLAD 120
TILDIGSAPARRMYS+HKYHC+CPMR EDPDRL YA++L EIT+K L K+ +
Sbjct 59 DTILDIGSAPARRMYSKHKYHCICPMRCAEDPDRLYKYATKLKKNCKEITDKELDKKMKE 118
Query 121 LKSVLESPDAETGTICFHNDVICRTTAEVSVMQNVY-INAPSTIYHQALKGVRKLYWIGF 179
L +V+ PD ET T+C H+D CR +V+V Q+VY ++ P+++YHQA KGVR YWIGF
Sbjct 119 LAAVMSDPDLETETMCLHDDESCRYEGQVAVYQDVYAVDGPTSLYHQANKGVRVAYWIGF 178
Query 180 DTTQFMFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTN 239
DTT FMF ++AG+YPSY+TNWADE VL ARNIGLCS+ + E + +S RKK LKP N
Sbjct 179 DTTPFMFKNLAGAYPSYSTNWADETVLTARNIGLCSSDVMERSRRGMSILRKKYLKPSNN 238
Query 240 VYFSVGSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITG 299
V FSVGST+Y E R L+SWHLPSVFHL+GKQ++TCRC+T V+C+GYVVK+I ISPG+ G
Sbjct 239 VLFSVGSTIYHEKRDLLRSWHLPSVFHLRGKQNYTCRCETIVSCDGYVVKRIAISPGLYG 298
Query 300 RVNRYTVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKL 359
+ + Y T + EGFL CK+TDT+ GERVSFPVCTY+P ++CDQMTGILATD+ +DAQKL
Sbjct 299 KPSGYAATMHREGFLCCKVTDTLNGERVSFPVCTYVPATLCDQMTGILATDVSADDAQKL 358
Query 360 LVGLNQRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFG 419
LVGLNQRIVVNG+T RNTNTM+NYLLP VA ++WAKE K D DE+PL +R+R+L G
Sbjct 359 LVGLNQRIVVNGRTQRNTNTMKNYLLPVVAQAFARWAKEYKEDQEDERPLGLRDRQLVMG 418
Query 420 CLWAFKTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKV-KLLLVKKTN 478
C WAF+ KI S Y+ P TQTI+KV ++F +F + + + +L + LR ++ K+L K
Sbjct 419 CCWAFRRHKITSIYKRPDTQTIIKVNSDFHSFVLPRIGSNTLEIGLRTRIRKMLEEHKEP 478
Query 479 KPVVTITDTAVKNAQEAYNEAVETAEAEEKAKALPPLKPTAPPVAE-DVKCEVTDLVDDA 537
P++T D V+ A+ A +EA E EAEE ALPPL A V E ++ +V ++ +A
Sbjct 479 SPLITAED--VQEAKCAADEAKEVREAEELRAALPPL---AADVEEPTLEADVDLMLQEA 533
Query 538 GA 539
GA
Sbjct 534 GA 535
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Chikungunya virus strain S27-African prototype]
Sequence ID: Q8JUX6.1 Length: 2474
Range 1: 4 to 535
Score:657 bits(1694), Expect:0.0,
Method:Compositional matrix adjust.,
Identities:325/537(61%), Positives:405/537(75%), Gaps:8/537(1%)
Query 6 VHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTSVTILD 65
V+VD+D S F+ LQ+++P FE+ +QVTPNDHANARAFSHLA KLIE EI TILD
Sbjct 4 VYVDIDADSAFLKALQRAYPMFEVEPRQVTPNDHANARAFSHLAIKLIEQEIDPDSTILD 63
Query 66 IGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLADLKSVL 125
IGSAPARRM S+ KYHCVCPMRS EDP+RL NYA +LA AG++ ++ + K+ DL++V+
Sbjct 64 IGSAPARRMMSDRKYHCVCPMRSAEDPERLANYARKLASAAGKVLDRNISGKIGDLQAVM 123
Query 126 ESPDAETGTICFHNDVICRTTAEVSVMQNVY-INAPSTIYHQALKGVRKLYWIGFDTTQF 184
PD ET T C H DV CR A+V++ Q+VY ++AP+++YHQA+KGVR YW+GFDTT F
Sbjct 124 AVPDTETPTFCLHTDVSCRQRADVAIYQDVYAVHAPTSLYHQAIKGVRLAYWVGFDTTPF 183
Query 185 MFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTNVYFSV 244
M+++MAG+YPSY+TNWADE+VL+A+NIGLCST L EG GKLS R K L+P V FSV
Sbjct 184 MYNAMAGAYPSYSTNWADEQVLKAKNIGLCSTDLTEGRRGKLSIMRGKKLEPCDRVLFSV 243
Query 245 GSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITGRVNRY 304
GSTLYPE+R L+SWHLPSVFHLKGK SFTCRCDT V+CEGYVVK+IT+SPG+ G+ Y
Sbjct 244 GSTLYPESRKLLKSWHLPSVFHLKGKLSFTCRCDTVVSCEGYVVKRITMSPGLYGKTTGY 303
Query 305 TVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKLLVGLN 364
VT++++GFL+CK TDTV GERVSF VCTY+P +ICDQMTGILAT++ PEDAQKLLVGLN
Sbjct 304 AVTHHADGFLMCKTTDTVDGERVSFSVCTYVPATICDQMTGILATEVTPEDAQKLLVGLN 363
Query 365 QRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFGCLWAF 424
QRIVVNG+T RNTNTM+NY++P VA SKWAKE + D DEK L VRER L CLWAF
Sbjct 364 QRIVVNGRTQRNTNTMKNYMIPVVAQAFSKWAKECRKDMEDEKLLGVRERTLTCCCLWAF 423
Query 425 KTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLLVKKTNKPVVTI 484
K +K H+ Y+ P TQ+I KV AEF +F + S+W++ L + LR ++K LL K K +T
Sbjct 424 KKQKTHTVYKRPDTQSIQKVQAEFDSFVVPSLWSSGLSIPLRTRIKWLL-SKVPKTDLTP 482
Query 485 TDTAVKNAQEAYNEAVETAEAEEKAKALPPLKPTAPPVAEDVKCE--VTDLVDDAGA 539
+ A++A EA E EAE +ALPPL+ EDV+ E V L D AGA
Sbjct 483 YSGDAQEARDAEKEAEEEREAELTLEALPPLQ----AAQEDVQVEIDVEQLEDRAGA 535
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Venezuelan equine encephalitis virus (strain P676)]
Sequence ID: P36328.2 Length: 2493
Range 1: 1 to 513
Score:657 bits(1694), Expect:0.0,
Method:Compositional matrix adjust.,
Identities:310/517(60%), Positives:392/517(75%), Gaps:6/517(1%)
Query 1 MEKPTVHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTS 60
MEK VHVD++ SPF+ LQ+SFPQFE+ A+QVT NDHANARAFSHLASKLIE E+ S
Sbjct 1 MEK--VHVDIEEDSPFLRALQRSFPQFEVEAKQVTDNDHANARAFSHLASKLIETEVDPS 58
Query 61 VTILDIGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLAD 120
TILDIGSAPARRMYS+HKYHC+CPMR EDPDRL YA++L EIT+K L K+ +
Sbjct 59 DTILDIGSAPARRMYSKHKYHCICPMRCAEDPDRLYKYATKLKKNCKEITDKELDKKMKE 118
Query 121 LKSVLESPDAETGTICFHNDVICRTTAEVSVMQNVY-INAPSTIYHQALKGVRKLYWIGF 179
L +V+ PD ET T+C H+D CR +V+V Q+VY ++ P+++YHQA KGVR YWIGF
Sbjct 119 LAAVMSDPDLETETMCLHDDESCRYEGQVAVYQDVYAVDGPTSLYHQANKGVRVAYWIGF 178
Query 180 DTTQFMFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTN 239
DTT FMF ++AG+YPSY+TNWADE VL ARNIGLCS+ + E + +S RKK LKP N
Sbjct 179 DTTPFMFKNLAGAYPSYSTNWADETVLTARNIGLCSSDVMERSRRGMSILRKKYLKPSNN 238
Query 240 VYFSVGSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITG 299
V FSVGST+Y E R L+SWHLPSVFHL+GKQ++TCRC+T V+C+GYVVK+I ISPG+ G
Sbjct 239 VLFSVGSTIYHEKRDLLRSWHLPSVFHLRGKQNYTCRCETIVSCDGYVVKRIAISPGLYG 298
Query 300 RVNRYTVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKL 359
+ + Y T + EGFL CK+TDT+ GERVSFPVCTY+P ++CDQMTGILATD+ +DAQKL
Sbjct 299 KPSGYAATMHREGFLCCKVTDTLNGERVSFPVCTYVPATLCDQMTGILATDVSADDAQKL 358
Query 360 LVGLNQRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFG 419
LVGLNQRIVVNG+T RNTNTM+NYLLP VA ++WAKE K D DE+PL +R+R+L G
Sbjct 359 LVGLNQRIVVNGRTQRNTNTMKNYLLPVVAQAFARWAKEYKEDQEDERPLGLRDRQLVMG 418
Query 420 CLWAFKTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKV-KLLLVKKTN 478
C WAF+ KI S Y+ P TQTI+KV ++F +F + + + +L + LR ++ K+L K
Sbjct 419 CCWAFRRHKITSIYKRPDTQTIIKVNSDFHSFVLPRIGSNTLEIGLRTRIRKMLEEHKEP 478
Query 479 KPVVTITDTAVKNAQEAYNEAVETAEAEEKAKALPPL 515
P++T D ++ A+ A +EA E EAEE ALPPL
Sbjct 479 SPLITAED--IQEAKCAADEAKEVREAEELRAALPPL 513
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Venezuelan equine encephalitis virus (strain 3880)]
Sequence ID: P36327.3 Length: 2485
Range 1: 1 to 535
Score:656 bits(1693), Expect:0.0,
Method:Compositional matrix adjust.,
Identities:316/542(58%), Positives:404/542(74%), Gaps:10/542(1%)
Query 1 MEKPTVHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTS 60
MEK VHVD++ SPF+ LQ+SFPQFE+ A+QVT NDHANARAFSHLASKLIE E+ S
Sbjct 1 MEK--VHVDIEEDSPFLRALQRSFPQFEVEAKQVTDNDHANARAFSHLASKLIETEVDPS 58
Query 61 VTILDIGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLAD 120
TILDIGSAPARRMYS+HKYHC+CPMR EDPDRL YA++L EIT+K L K+ +
Sbjct 59 DTILDIGSAPARRMYSKHKYHCICPMRCAEDPDRLYKYATKLKKNCKEITDKELDKKMKE 118
Query 121 LKSVLESPDAETGTICFHNDVICRTTAEVSVMQNVY-INAPSTIYHQALKGVRKLYWIGF 179
L +V+ PD ET T+C H+D CR +V+V Q+VY ++ P+++YHQA KGVR YWIGF
Sbjct 119 LAAVMSDPDLETETMCLHDDESCRYEGQVAVYQDVYAVDGPTSLYHQANKGVRVAYWIGF 178
Query 180 DTTQFMFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTN 239
DTT FMF ++AG+YPSY+TNWADE VL ARNIGLCS+ + E + +S RKK LKP N
Sbjct 179 DTTPFMFKNLAGAYPSYSTNWADETVLTARNIGLCSSDVMERSRRGMSILRKKYLKPSNN 238
Query 240 VYFSVGSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITG 299
V FSVGST+Y E R L+SWHLPSVFHL+GKQ++TCRC+T V+C+GYVVK+I ISPG+ G
Sbjct 239 VLFSVGSTIYHEKRDLLRSWHLPSVFHLRGKQNYTCRCETIVSCDGYVVKRIAISPGLYG 298
Query 300 RVNRYTVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKL 359
+ + Y T + EGFL CK+TDT+ GERVSFPVCTY+P ++CDQMTGILATD+ +DAQKL
Sbjct 299 KPSGYAATMHREGFLCCKVTDTLNGERVSFPVCTYVPATLCDQMTGILATDVSADDAQKL 358
Query 360 LVGLNQRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFG 419
LVGLNQRIVVNG+T RNTNTM+NYLLP VA ++WAKE K D DE+PL +R+R+L G
Sbjct 359 LVGLNQRIVVNGRTQRNTNTMKNYLLPVVAQAFARWAKEYKEDQEDERPLGLRDRQLVMG 418
Query 420 CLWAFKTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKV-KLLLVKKTN 478
C WAF+ KI S Y+ P TQTI+KV ++F +F + + + +L + LR ++ K+L K
Sbjct 419 CCWAFRRHKITSIYKRPDTQTIIKVNSDFHSFVLPRIGSNTLEIGLRTRIRKMLEEHKEP 478
Query 479 KPVVTITDTAVKNAQEAYNEAVETAEAEEKAKALPPLKPTAPPVAE-DVKCEVTDLVDDA 537
P++T D ++ A+ A +EA E EAEE LPPL A V E ++ +V ++ +A
Sbjct 479 SPLITAED--IQEAKCAADEAKEVREAEELRAVLPPL---AADVEEPTLEADVDLMLQEA 533
Query 538 GA 539
GA
Sbjct 534 GA 535
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Barmah Forest virus]
Sequence ID: P87515.3 Length: 2411
Range 1: 1 to 515
Score:650 bits(1676), Expect:0.0,
Method:Compositional matrix adjust.,
Identities:309/519(60%), Positives:385/519(74%), Gaps:5/519(0%)
Query 1 MEKPTVHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTS 60
M KP V +DV+P+S F Q+Q FPQFEI A Q TPNDHA+ARAFSHLA+KLIE E
Sbjct 1 MAKPVVKIDVEPESHFAKQVQSCFPQFEIEAVQTTPNDHAHARAFSHLATKLIEMETAKD 60
Query 61 VTILDIGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLAD 120
ILDIGSAPARR+YSEHKYHCVCPM+ EDP+R++ YA +L AG K +KL D
Sbjct 61 QIILDIGSAPARRLYSEHKYHCVCPMKCTEDPERMLGYARKLI--AGSAKGKA--EKLRD 116
Query 121 LKSVLESPDAETGTICFHNDVICRTTAEVSVMQNVY-INAPSTIYHQALKGVRKLYWIGF 179
L+ VL +PD ET ++C H D CR +V+V Q+VY I+AP+T+YHQALKGVR YWIGF
Sbjct 117 LRDVLATPDIETQSLCLHTDASCRYRGDVAVYQDVYAIDAPTTLYHQALKGVRTAYWIGF 176
Query 180 DTTQFMFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTN 239
DTT FM+ ++AG+YP Y+TNWADE+VLE+RNIGLCS K+ EG S RKK LK
Sbjct 177 DTTPFMYDALAGAYPLYSTNWADEQVLESRNIGLCSDKVSEGGKKGRSILRKKFLKQSDR 236
Query 240 VYFSVGSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITG 299
V FSVGSTLY E+R LQSWHLPS FHLKGK SFTCRCDT V+CEGYV+KKIT+ PG+TG
Sbjct 237 VMFSVGSTLYTESRKLLQSWHLPSTFHLKGKSSFTCRCDTIVSCEGYVLKKITMCPGVTG 296
Query 300 RVNRYTVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKL 359
+ Y VT++ EGF++ K+TDT++GERVSF VCTY+P ++CDQMTGILAT++ +DAQKL
Sbjct 297 KPIGYAVTHHKEGFVVGKVTDTIRGERVSFAVCTYVPTTLCDQMTGILATEVTADDAQKL 356
Query 360 LVGLNQRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFG 419
LVGLNQRIVVNG+T RNTNTM+NYLLP VA L+KWAKE K D DE+PLN R+R L
Sbjct 357 LVGLNQRIVVNGRTQRNTNTMKNYLLPLVAQALAKWAKEAKQDMEDERPLNERQRTLTCL 416
Query 420 CLWAFKTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLLVKKTNK 479
C WAFK K H+ Y+ P TQ+IVKV EF++FP+ S+W+ + +SLRQK+K++L +
Sbjct 417 CCWAFKRNKRHAIYKRPDTQSIVKVPCEFTSFPLVSLWSAGMSISLRQKLKMMLQARQPT 476
Query 480 PVVTITDTAVKNAQEAYNEAVETAEAEEKAKALPPLKPT 518
+ +T+ ++ A EAV+TA AE A P + T
Sbjct 477 QIAAVTEELIQEAAAVEQEAVDTANAELDHAAWPSIVDT 515
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Venezuelan equine encephalitis virus (strain Mena II)]
Sequence ID: Q9WJC7.3 Length: 2499
Range 1: 1 to 535
Score:649 bits(1673), Expect:0.0,
Method:Compositional matrix adjust.,
Identities:310/545(57%), Positives:401/545(73%), Gaps:16/545(2%)
Query 1 MEKPTVHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTS 60
MEK VHVD++ SPF+ LQ+SFPQFE+ A+QVT NDHANARAFSHLASKLIE E+ S
Sbjct 1 MEK--VHVDIEEDSPFLRALQRSFPQFEVEAKQVTDNDHANARAFSHLASKLIETEVEPS 58
Query 61 VTILDIGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLAD 120
TILDIGSAPARRMYS+HKYHC+CPM+ EDPDRL YA++L EIT+K L K+ +
Sbjct 59 DTILDIGSAPARRMYSKHKYHCICPMKCAEDPDRLFKYAAKLKKNCKEITDKELDKKMKE 118
Query 121 LKSVLESPDAETGTICFHNDVICRTTAEVSVMQNVY-INAPSTIYHQALKGVRKLYWIGF 179
L V+ PD ET TIC H+D CR +V+V Q+VY ++ P+++YHQA KGVR YWIGF
Sbjct 119 LAEVMNDPDLETETICLHDDETCRFEGQVAVYQDVYAVDGPTSLYHQANKGVRVAYWIGF 178
Query 180 DTTQFMFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTN 239
DTT FMF ++AG+YPSY+TNWADE VL ARNIGLCS+ + E + +S RKK LKP N
Sbjct 179 DTTPFMFKNLAGAYPSYSTNWADETVLTARNIGLCSSDVMERSRRGMSILRKKFLKPSNN 238
Query 240 VYFSVGSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITG 299
V FSVGST+Y E R L+SWHLPSVFHL+GKQ++TCRC+T V+C+GYVVK+I ISPG+ G
Sbjct 239 VLFSVGSTIYHEKRDLLRSWHLPSVFHLRGKQNYTCRCETIVSCDGYVVKRIAISPGLYG 298
Query 300 RVNRYTVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKL 359
+ + Y T + EGFL CK+TDT+ GERVSFPVCTY+P ++CDQMTGILATD+ +DAQKL
Sbjct 299 KPSGYAATMHREGFLCCKVTDTLNGERVSFPVCTYVPATLCDQMTGILATDVSADDAQKL 358
Query 360 LVGLNQRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFG 419
LVGLNQRIVVNG+T RNTNTM+NYLLP VA ++WAKE K D DE+PL +R+R+L G
Sbjct 359 LVGLNQRIVVNGRTQRNTNTMKNYLLPVVAQAFARWAKEYKEDQEDERPLGLRDRQLVMG 418
Query 420 CLWAFKTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLLVKKTNK 479
C WAF+ KI S Y+ P TQTI+KV ++F +F + + +++L + LR ++K LL + ++
Sbjct 419 CCWAFRKHKITSVYKRPDTQTIIKVNSDFHSFVLPRIGSSTLEIGLRTRIKKLLEEPVDR 478
Query 480 PVVTITDTAVKNAQEAYNEAVETAEAEEKAKALPPLKPTAPPVAEDV-----KCEVTDLV 534
P + D + QEA N A+ ++ K L+ PP++ DV + +V ++
Sbjct 479 PPLITAD----DIQEAKN----AADEAKEVKEAEELRAALPPLSADVEEPALEADVDLML 530
Query 535 DDAGA 539
+AGA
Sbjct 531 QEAGA 535
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Western equine encephalitis virus]
Sequence ID: P13896.3 Length: 2467
Range 1: 1 to 533
Score:647 bits(1670), Expect:0.0,
Method:Compositional matrix adjust.,
Identities:324/540(60%), Positives:401/540(74%), Gaps:8/540(1%)
Query 1 MEKPTVHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTS 60
ME+ +HVD+D SP+V LQ++FPQFEI A+QVT NDHANARAFSH+A+KLIE E+
Sbjct 1 MER--IHVDLDADSPYVKSLQRTFPQFEIEARQVTDNDHANARAFSHVATKLIESEVDRD 58
Query 61 VTILDIGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLAD 120
ILDIGSAP R +S H+YHC+CPM S EDPDRL YA RL K +IT+K + K AD
Sbjct 59 QVILDIGSAPVRHAHSNHRYHCICPMISAEDPDRLQRYAERL--KKSDITDKNIASKAAD 116
Query 121 LKSVLESPDAETGTICFHNDVICRTTAEVSVMQNVY-INAPSTIYHQALKGVRKLYWIGF 179
L V+ +PDAET ++C H D CR V+V Q+VY ++AP++IYHQALKGVR +YWIGF
Sbjct 117 LLEVMSTPDAETPSLCMHTDATCRYFGSVAVYQDVYAVHAPTSIYHQALKGVRTIYWIGF 176
Query 180 DTTQFMFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTN 239
DTT FM+ +MAGSYP+YNTNWADERVLEARNIGL ++ L+E +GKLS RKK L+P
Sbjct 177 DTTPFMYKNMAGSYPTYNTNWADERVLEARNIGLGNSDLQESRLGKLSILRKKRLQPTNK 236
Query 240 VYFSVGSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITG 299
+ FSVGST+Y E+R+ L+SWHLP+VFHLKGK +FT RC T V+CEGYV+KKITISPG+ G
Sbjct 237 IIFSVGSTIYTEDRSLLRSWHLPNVFHLKGKSNFTGRCGTIVSCEGYVIKKITISPGLYG 296
Query 300 RVNRYTVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKL 359
+V T + EGFL CK+TDT++GERVSF VCTY+P ++CDQMTGILATD+ +DAQKL
Sbjct 297 KVENLASTMHREGFLSCKVTDTLRGERVSFAVCTYVPATLCDQMTGILATDVSVDDAQKL 356
Query 360 LVGLNQRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFG 419
LVGLNQRIVVNG+T RNTNTMQNYLLP VA S+WA+E +AD DEK L VRER L G
Sbjct 357 LVGLNQRIVVNGRTQRNTNTMQNYLLPVVAQAFSRWAREHRADLDDEKELGVRERTLTMG 416
Query 420 CLWAFKTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLLVKKTNK 479
C WAFKT+KI S Y+ PGTQTI KV A F +F + + + L M R+++KLLL + T K
Sbjct 417 CCWAFKTQKITSIYKKPGTQTIKKVPAVFDSFVIPRLTSHGLDMGFRRRLKLLL-EPTVK 475
Query 480 PVVTITDTAVKNAQEAYNEAVETAEAEEKAKALPPLKPTAPPVAEDVKCEVTDLVDDAGA 539
P IT V++ + EA E A AEE +ALPPL P E V+ EV ++ +AGA
Sbjct 476 PAPAITMADVEHLRGLQQEAEEVAAAEEIREALPPLLPEIE--KETVEAEVDLIMQEAGA 533
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Venezuelan equine encephalitis virus]
Sequence ID: Q8V294.3 Length: 2497
Range 1: 1 to 535
Score:646 bits(1666), Expect:0.0,
Method:Compositional matrix adjust.,
Identities:308/545(57%), Positives:400/545(73%), Gaps:16/545(2%)
Query 1 MEKPTVHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTS 60
MEK VHVD++ SPF+ LQ+SFPQFE+ A+QVT NDHANARAFSHLASKLIE E+ S
Sbjct 1 MEK--VHVDIEEDSPFLRALQRSFPQFEVEAKQVTDNDHANARAFSHLASKLIETEVEPS 58
Query 61 VTILDIGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLAD 120
TILDIGSAPARRMYS+HKYHC+CPM+ EDPDRL YA++L +IT+K L K+ +
Sbjct 59 DTILDIGSAPARRMYSKHKYHCICPMKCAEDPDRLFKYAAKLKKNCKDITDKELDKKMKE 118
Query 121 LKSVLESPDAETGTICFHNDVICRTTAEVSVMQNVY-INAPSTIYHQALKGVRKLYWIGF 179
L V+ PD ET TIC H+D CR +V+V Q+VY ++ P+++YHQA KGVR YWIGF
Sbjct 119 LAEVMSDPDLETETICLHDDETCRFEGQVAVYQDVYAVDGPTSLYHQANKGVRVAYWIGF 178
Query 180 DTTQFMFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTN 239
DTT FMF ++AG+YPSY+TNWADE VL ARNIGLCS+ + E + +S RKK LKP N
Sbjct 179 DTTPFMFKNLAGAYPSYSTNWADETVLTARNIGLCSSDVMERSRRGMSILRKKFLKPSNN 238
Query 240 VYFSVGSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITG 299
V FSVGST+Y E R L+SWHLPSVFHL+GKQ++TCRC+T V+C+GYVVK+I ISPG+ G
Sbjct 239 VLFSVGSTIYHEKRDLLRSWHLPSVFHLRGKQNYTCRCETIVSCDGYVVKRIAISPGLYG 298
Query 300 RVNRYTVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKL 359
+ + Y T + EGFL CK+TDT+ GERVSFPVCTY+P ++CDQMTGILATD+ +DAQKL
Sbjct 299 KPSGYAATMHREGFLCCKVTDTLDGERVSFPVCTYVPATLCDQMTGILATDVSADDAQKL 358
Query 360 LVGLNQRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFG 419
LVGLNQRIVVNG+T RNTNTM+NYLLP VA ++WAKE K D DE+PL +R+R+L G
Sbjct 359 LVGLNQRIVVNGRTQRNTNTMKNYLLPVVAQAFARWAKEYKEDQEDERPLGLRDRQLVMG 418
Query 420 CLWAFKTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLLVKKTNK 479
C WAF+ KI S Y+ P TQTI+KV ++F +F + + + +L + LR +++ LL + ++
Sbjct 419 CCWAFRKHKITSVYKRPDTQTIIKVNSDFHSFVLPRIGSNTLEIGLRTRIRKLLEEPVDR 478
Query 480 PVVTITDTAVKNAQEAYNEAVETAEAEEKAKALPPLKPTAPPVAEDV-----KCEVTDLV 534
P + D + QEA N A+ ++ K L+ PP++ DV + +V ++
Sbjct 479 PPLITAD----DIQEAKN----AADEAKEVKEAEELRAALPPLSADVEEPALEADVDLML 530
Query 535 DDAGA 539
+AGA
Sbjct 531 QEAGA 535
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Eastern equine encephalitis virus (strain Florida 91-469)]
Sequence ID: Q4QXJ8.3 Length: 2494
Range 1: 1 to 533
Score:644 bits(1660), Expect:0.0,
Method:Compositional matrix adjust.,
Identities:323/542(60%), Positives:399/542(73%), Gaps:12/542(2%)
Query 1 MEKPTVHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTS 60
MEK VHVD+D SPFV LQ+ FP FEI A QVT NDHANARAFSHLA+KLIE E+ T
Sbjct 1 MEK--VHVDLDADSPFVKSLQRCFPHFEIEATQVTDNDHANARAFSHLATKLIEGEVDTD 58
Query 61 VTILDIGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLAD 120
ILDIGSAP R +S+HKYHC+CPM+S EDPDRL YA +L + ++T+K + K AD
Sbjct 59 QVILDIGSAPVRHTHSKHKYHCICPMKSAEDPDRLYRYADKL--RKSDVTDKCIASKAAD 116
Query 121 LKSVLESPDAETGTICFHNDVICRTTAEVSVMQNVY-INAPSTIYHQALKGVRKLYWIGF 179
L +V+ +PDAET ++C H D CR V+V Q+VY ++AP++IY+QALKGVR +YWIGF
Sbjct 117 LLTVMSTPDAETPSLCMHTDSTCRYHGSVAVYQDVYAVHAPTSIYYQALKGVRTIYWIGF 176
Query 180 DTTQFMFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTN 239
DTT FM+ +MAG+YP+YNTNWADE VLEARNIGL S+ L E + GK+S RKK L+P
Sbjct 177 DTTPFMYKNMAGAYPTYNTNWADESVLEARNIGLGSSDLHEKSFGKVSIMRKKKLQPTNK 236
Query 240 VYFSVGSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITG 299
V FSVGST+Y E R L+SWHLP+VFHLKGK SFT RC+T V+CEGYVVKKIT+SPGI G
Sbjct 237 VIFSVGSTIYTEERILLRSWHLPNVFHLKGKTSFTGRCNTIVSCEGYVVKKITLSPGIYG 296
Query 300 RVNRYTVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKL 359
+V+ T + EGFL CK+TDT++GERVSFPVCTY+P ++CDQMTGILATD+ +DAQKL
Sbjct 297 KVDNLASTMHREGFLSCKVTDTLRGERVSFPVCTYVPATLCDQMTGILATDVSVDDAQKL 356
Query 360 LVGLNQRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFG 419
LVGLNQRIVVNG+T RNTNTMQNYLLP VA S+WA+E +AD DEK L VRER L G
Sbjct 357 LVGLNQRIVVNGRTQRNTNTMQNYLLPVVAQAFSRWAREHRADLEDEKGLGVRERSLVMG 416
Query 420 CLWAFKTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLL-VKKTN 478
C WAFKT KI S Y+ PGTQTI KV A F++F + + L + LR+++K+L KK
Sbjct 417 CCWAFKTHKITSIYKRPGTQTIKKVPAVFNSFVIPQPTSYGLDIGLRRRIKMLFDAKKAP 476
Query 479 KPVVTITDTA-VKNAQEAYNEAVETAEAEEKAKALPPLKPTAPPVAEDVKCEVTDLVDDA 537
P++T D A +K Q+ A AEAE ALPPL P E V+ ++ ++ +A
Sbjct 477 APIITEADVAHLKGLQDE---AEAVAEAEAVRAALPPLLPEVD--KETVEADIDLIMQEA 531
Query 538 GA 539
GA
Sbjct 532 GA 533
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Eastern equine encephalitis virus (strain PE-3.0815)]
Sequence ID: Q306W8.3 Length: 2474
Range 1: 1 to 533
Score:643 bits(1659), Expect:0.0,
Method:Compositional matrix adjust.,
Identities:321/540(59%), Positives:397/540(73%), Gaps:8/540(1%)
Query 1 MEKPTVHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTS 60
MEK VHVD+D SP+V LQK FP FEI A QVT NDHANARAFSHLA+KLIE E+
Sbjct 1 MEK--VHVDLDADSPYVKLLQKCFPHFEIEATQVTDNDHANARAFSHLATKLIESEVDPD 58
Query 61 VTILDIGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLAD 120
ILDIGSAP R +S+HKYHC+CPM S EDPDRL YA +L + ++T++ + K AD
Sbjct 59 QVILDIGSAPVRHTHSKHKYHCICPMISAEDPDRLQRYADKL--RKSDVTDRFIASKAAD 116
Query 121 LKSVLESPDAETGTICFHNDVICRTTAEVSVMQNVY-INAPSTIYHQALKGVRKLYWIGF 179
L +V+ +PD ET ++C H D CR V+V Q+VY ++AP++IYHQALKGVR +YWIGF
Sbjct 117 LLTVMSTPDVETPSLCMHTDSTCRYHGTVAVYQDVYAVHAPTSIYHQALKGVRTIYWIGF 176
Query 180 DTTQFMFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTN 239
DTT FM+ +MAG+YP+YNTNWADE VLEARNIGLCS+ L E +GK+S RKK L+P
Sbjct 177 DTTPFMYKNMAGAYPTYNTNWADESVLEARNIGLCSSDLHEKRLGKISIMRKKKLQPTNK 236
Query 240 VYFSVGSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITG 299
V FSVGST+Y E R L+SWHLP+VFHLKGK SFT RC+T V+C+GYVVKKITISPGI G
Sbjct 237 VVFSVGSTIYTEERILLRSWHLPNVFHLKGKTSFTGRCNTIVSCDGYVVKKITISPGIYG 296
Query 300 RVNRYTVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKL 359
+V+ T + EGFL CK+TDT++GERVSFPVCTY+P ++CDQMTGILATD+ +DAQKL
Sbjct 297 KVDNLASTLHREGFLSCKVTDTLRGERVSFPVCTYVPATLCDQMTGILATDVSVDDAQKL 356
Query 360 LVGLNQRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFG 419
LVGLNQRIVVNG+T RNTNTMQNYLLP VA S+WA+E +AD DEK L VRER L G
Sbjct 357 LVGLNQRIVVNGRTQRNTNTMQNYLLPVVAQAFSRWAREYRADLEDEKDLGVRERSLVMG 416
Query 420 CLWAFKTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLLVKKTNK 479
C WAFKT KI S Y+ PGTQTI KV A F++F + + L + LR+++K+LL +K K
Sbjct 417 CCWAFKTHKITSIYKKPGTQTIKKVPAVFNSFVIPQFNSYGLNIGLRRRIKMLLEEK-RK 475
Query 480 PVVTITDTAVKNAQEAYNEAVETAEAEEKAKALPPLKPTAPPVAEDVKCEVTDLVDDAGA 539
P IT+ V + + EA AEAE ALPPL P E ++ ++ ++ +AGA
Sbjct 476 PAPIITEADVAHLKGMQEEAEAVAEAEAVRAALPPLLPEVE--RETIEADIDLIMQEAGA 533
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Eastern equine encephalitis virus (strain PE-0.0155)]
Sequence ID: Q306W6.3 Length: 2471
Range 1: 1 to 533
Score:640 bits(1652), Expect:0.0,
Method:Compositional matrix adjust.,
Identities:321/540(59%), Positives:394/540(72%), Gaps:8/540(1%)
Query 1 MEKPTVHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTS 60
MEK VHVD+D SP+V LQK FP FEI A QVT NDHANARAFSHLA+KLIE E+
Sbjct 1 MEK--VHVDLDADSPYVKSLQKCFPHFEIEATQVTDNDHANARAFSHLATKLIESEVDPD 58
Query 61 VTILDIGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLAD 120
ILDIGSAP R +S+HKYHC+CPM S EDPDRL YA +L + ++T++ + K AD
Sbjct 59 QVILDIGSAPVRHTHSKHKYHCICPMISAEDPDRLHRYADKL--RKSDVTDRFIASKAAD 116
Query 121 LKSVLESPDAETGTICFHNDVICRTTAEVSVMQNVY-INAPSTIYHQALKGVRKLYWIGF 179
L +V+ +PD ET ++C H D CR V+V Q+VY ++AP++IYHQALKGVR +YWIGF
Sbjct 117 LLTVMSTPDVETPSLCMHTDSTCRYHGTVAVYQDVYAVHAPTSIYHQALKGVRTIYWIGF 176
Query 180 DTTQFMFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTN 239
DTT FM+ +MAG+YP+YNTNWADE VLEARNIGLCS+ L E GK+S RKK L+P
Sbjct 177 DTTPFMYKNMAGAYPTYNTNWADESVLEARNIGLCSSDLHEQRFGKISIMRKKKLQPTNK 236
Query 240 VYFSVGSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITG 299
V FSVGST+Y E R L+SWHLP+VFHLKGK SFT RC+T V+CEGYVVKKITISPGI G
Sbjct 237 VVFSVGSTIYTEERILLRSWHLPNVFHLKGKTSFTGRCNTIVSCEGYVVKKITISPGIYG 296
Query 300 RVNRYTVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKL 359
+V+ T + EGFL CK+TDT++GERVSFPVCTY+P ++CDQMTGILATD+ +DAQKL
Sbjct 297 KVDNLASTMHREGFLSCKVTDTLRGERVSFPVCTYVPATLCDQMTGILATDVSVDDAQKL 356
Query 360 LVGLNQRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKLAFG 419
LVGLNQRIVVNG+T RNTNTM NYLLP VA S+WA+E AD DEK L VRER L G
Sbjct 357 LVGLNQRIVVNGRTQRNTNTMPNYLLPIVAQAFSRWAREYHADLEDEKDLGVRERSLVMG 416
Query 420 CLWAFKTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLLVKKTNK 479
C WAFKT KI S Y+ PGTQT KV A F++F + + + L + LR+++K+LL +K K
Sbjct 417 CCWAFKTHKITSIYKKPGTQTTKKVPAVFNSFVVPQLTSYGLDIELRRRIKMLLEEK-KK 475
Query 480 PVVTITDTAVKNAQEAYNEAVETAEAEEKAKALPPLKPTAPPVAEDVKCEVTDLVDDAGA 539
P IT+ V + + EA AEAE ALPPL P E V+ ++ ++ +AGA
Sbjct 476 PAPIITEADVAHLKGMQEEAEVVAEAEAIRAALPPLLPEVE--RETVEADIDLIMQEAGA 533
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Sleeping disease virus]
Sequence ID: Q8QL53.1 Length: 2593
Range 1: 14 to 548
Score:407 bits(1046), Expect:2e-126,
Method:Compositional matrix adjust.,
Identities:232/540(43%), Positives:318/540(58%), Gaps:17/540(3%)
Query 5 TVHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPT-SVTI 63
TV VD+ P + Q + +FP FE+VA + NDHA ARAFSHLA+K IE +I V +
Sbjct 14 TVTVDLPADHPALNQFKTAFPGFEVVASNRSSNDHAAARAFSHLATKWIERDIDGRQVIV 73
Query 64 LDIGSAPARRMYSEHK--YHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLADL 121
DIGSAPARR+ + YH VCP + EDP+RL +YA +L + + D++ DL
Sbjct 74 ADIGSAPARRVGAPDNVTYHSVCPRKCAEDPERLASYARKLVRAVEKGDGHLVSDRITDL 133
Query 122 KSVLESPDA--ETGTICFHNDVICRTTAEVSVMQNVY-INAPSTIYHQALKGVRKLYWIG 178
K VLE+PD ET +IC ++DV C+ A+++V Q+VY ++APSTIY QA KG R +YWIG
Sbjct 134 KDVLENPDTSLETTSICLNDDVSCKVKADIAVYQDVYAVDAPSTIYAQADKGTRVVYWIG 193
Query 179 FDTTQFMFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGT 238
F+ F +MAGS+P Y+ NW+D VL A+N+ LC + L E ++ FR K L P
Sbjct 194 FEPFVFHTDAMAGSFPLYDANWSDSAVLAAKNLPLCYSGLSEDSIKWRFRFRDKPLVPSG 253
Query 239 NVYFSVGSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGIT 298
+++SVGST Y E+R L+SWHLPS FH +TCRCDT V+C GYVVKKITI GI
Sbjct 254 EIHYSVGSTHYVEDRDKLKSWHLPSTFHFVAPNKYTCRCDTVVSCGGYVVKKITICEGIV 313
Query 299 GR-VNRYTVTN-NSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDA 356
GR N T+ + +G ++ K +DT+ E+VSFPV TYIP ICDQMT + A ++ D
Sbjct 314 GRPANEELATSYHRDGVVVTKFSDTINHEQVSFPVVTYIPAVICDQMTAMTADPVKYPDV 373
Query 357 QKLLVGLNQRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKL 416
KLLVGLNQRIVVNG T RN N+M N L+P A L WA E + D DE+ +
Sbjct 374 VKLLVGLNQRIVVNGTTVRNVNSMDNSLIPVFARALCSWADEARRDMEDEQDMYGVTSVT 433
Query 417 AFGCLW-AFKTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLLVK 475
+ C+ A+ ++ H+FYR P + + V A+F+ SL + L+
Sbjct 434 TWICICRAYDKRQQHTFYRRPKQSSGIYVPAKFTG-----SLRASLSATYLNLPLKQLLL 488
Query 476 KTNKPVVTITDTAVKNAQEAY-NEAVETAEAEEKAKALPPLKPT--APPVAEDVKCEVTD 532
T K + D A+ + EA ++A E E E+ P+ A + +D + EV D
Sbjct 489 NTLKRAIKPGDQALADETEARAHDAAEVHELTEEEGRQQAANPSYIADVLGQDDEEEVDD 548
>RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Salmon pancreas disease virus]
Sequence ID: Q8JJX1.1 Length: 2601
Range 1: 14 to 532
Score:405 bits(1042), Expect:8e-126,
Method:Compositional matrix adjust.,
Identities:224/524(43%), Positives:315/524(60%), Gaps:15/524(2%)
Query 5 TVHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPT-SVTI 63
TV V++ P + Q + +FP FE+VA + NDHA ARAFSHLA+K IE +I V +
Sbjct 14 TVTVNLPADHPALNQFKTAFPGFEVVASNRSSNDHAAARAFSHLATKWIERDIGGRQVIV 73
Query 64 LDIGSAPARRMYSEHK--YHCVCPMRSPEDPDRLMNYASRLADKAGEITNKRLHDKLADL 121
DIGSAPARR+ + YH VCP + EDP+RL +YA +L +++K+ DL
Sbjct 74 ADIGSAPARRIGAPDNVTYHSVCPRKCAEDPERLASYARKLVRAVERGDGHLVNEKITDL 133
Query 122 KSVLESPDA--ETGTICFHNDVICRTTAEVSVMQNVY-INAPSTIYHQALKGVRKLYWIG 178
K VLE+PD ET +IC ++DV C+ A+++V Q+VY ++APSTIY QA KG R +YWIG
Sbjct 134 KDVLENPDTSLETTSICLNDDVSCKVKADIAVYQDVYAVDAPSTIYAQADKGTRVVYWIG 193
Query 179 FDTTQFMFSSMAGSYPSYNTNWADERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGT 238
F+ F +MAGS+P Y+ NW+D VL A+N+ LC + L E ++ FR K L P
Sbjct 194 FEPFVFHTDAMAGSFPLYDANWSDSAVLAAKNLPLCYSGLSEDSIKWRFRFRDKPLVPSG 253
Query 239 NVYFSVGSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGIT 298
+++SVGST Y E+R L+SWHLPS FH +TCRCDT V+C GYVVKKITI GI
Sbjct 254 EIHYSVGSTHYVEDRDKLKSWHLPSTFHFVAPNKYTCRCDTVVSCGGYVVKKITICEGIV 313
Query 299 G--RVNRYTVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDA 356
G + + +G ++ K +DT+ E+VSFPV TYIP ICDQMT + A ++ DA
Sbjct 314 GIPAKEELATSYHRDGVVVTKFSDTINHEQVSFPVVTYIPAVICDQMTAMTANPVKYSDA 373
Query 357 QKLLVGLNQRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKADCSDEKPLNVRERKL 416
KLLVGLNQRIVVNG T RN N+M N L+P A L WA E + D DE+ L
Sbjct 374 VKLLVGLNQRIVVNGTTVRNVNSMDNSLIPVFARALCSWADEVRRDMEDEQDLYGITSVT 433
Query 417 AFGCLW-AFKTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLLVK 475
+ C+ A+ ++ H+FYR P + + V A+F+ + + + + +++ L +K
Sbjct 434 TWICICRAYDKRQQHTFYRRPKQSSGIYVPAKFTG-SLRAALSATYLNLPLKQLLLNTLK 492
Query 476 KTNKPVVTITDTAVKNAQEAY-NEAVETAEAEEKAKALPPLKPT 518
+ KP+ D A+ + EA ++A E E E+ + P+
Sbjct 493 RAIKPM----DQAIADETEALAHDAAEVHELTEEERRQQAANPS 532