FastQCFastQC Report
Пн 1 дек 2014
Ath_tae_CTTGTA_L003_R2_010.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameAth_tae_CTTGTA_L003_R2_010.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2439795
Sequences flagged as poor quality0
Sequence length101
%GC35

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA3450.018.58302946-47
TGGTCGC4200.015.82301142-43
AGCGTCG5450.013.51158610-11
GAGCGTC6007.348717E-1012.6739989
AAGAGCG10100.011.2927347
CGTCGTG6200.011.10618312-13
GGTCGCC3802.6884663E-910.61807342-43
TCGGTGG7750.010.41181738-39
GTCGCCG6500.010.22514844-45
CCGTATC6200.09.96033148-49
TCGGAAG11001.8189894E-129.9302293
GGTGGTC7750.09.79905540-41
GTACTGG4050.0050022389.383141
AGAGCGT8903.4877303E-89.0782858
AGAGCGG4350.0089558328.7406878
TCGCGGC2550.0034771858.382215524-25
GATCGGA14357.2759576E-128.2756351
GTAGGGA10650.08.25036118-19
GTGTAGG11850.08.215816516-17
ATCGGAA16251.8189894E-127.8907212
Produced by FastQC (version 0.11.2)