Stride Visual Assignment

Legend of secondary structure icons:
helixH Alpha-Helix
extendedE Extended Configuration (Beta-sheet)
isolated beta BIsolated Beta Bridge
isolated beta bIsolated Beta Bridge (Type 3 Fig 4,cd)
turnT Turn
coilC or " " Coil
3-10 helixG 3-10 Helix
pi-helixI Pi-Helix

Residue Information: (point on the structure of a residue to get the detailed assignment information)

Residue nameChainPdb residue # Ordinal residue #One letter code StructurePhi anglePsi angle Solvent accessible area

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TRANSPORT PROTEIN 23-MAY-11 2YJP

Chain: A

  HHHHHHH EEEEETTEETTTEEETTTT EE HHHHHHHHHHHHHH  
1 AATVAAIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLG50
  TTTTEEEEE GGGHHHHHHHTTTTEETTTTB HHHHH EEE EEE 
51 SPDKVEFVLTEAANRVEYVRSGKVDLILANFTQTPERAEAVDFADPYMKV100
  EEEEEETTTT GGGGTTT EEEETTTHHHHHHHHHHTTT EEEE H 
101 ALGVVSPKNKPITDMAQLKDQTLLVNKGTTADAFFTKSHPEVKLLKFDQN150
  HHHHHHHHHTTTTEEEEEHHHHHHHHHHTTTEEEEET EEE EEE 
151 TETFDALKDGRGVALAHDNALLWAWAKENPNFEVAIGNLGPAEFIAPAVQ200
  TTTHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHTTTTTGGG B  
201 KGNADLLNWVNGEIAAMKKDGRLKAAYEKTLLPVYGEKVKPEALLAE 247

Chain: B

  HHHHHHH EEEEETTEETTTEEEETTTEEE HHHHHHHHHHHHHH T 
1 ATVAAIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGS50
  TTTEEEEE GGGHHHHHHHTTTTEEEEEEE HHHHH EEE EEE  
51 PDKVEFVLTEAANRVEYVRSGKVDLILANFTQTPERAEAVDFADPYMKVA100
  EEEEEETTTT GGGTTTTEEEEETTTHHHHHHHHHTTTTEEEEE HH 
101 LGVVSPKNKPITDMAQLKDQTLLVNKGTTADAFFTKSHPEVKLLKFDQNT150
  HHHHHHHHTTTTEEEEEHHHHHHHHHHTTTEEEEET EEEEEEEET 
151 ETFDALKDGRGVALAHDNALLWAWAKENPNFEVAIGNLGPAEFIAPAVQK200
  TTHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHTTTTTGGG B  
201 GNADLLNWVNGEIAAMKKDGRLKAAYEKTLLPVYGEKVKPEALLAE 246

Chain: C

  HHHHHHH EEEEETTEETTTEEETTTT EE HHHHHHHHHHHHHH T 
1 ATVAAIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGS50
  TTTEEEEE GGGHHHHHHHTTTTEEEEEEE HHHHH EE EEEE 
51 PDKVEFVLTEAANRVEYVRSGKVDLILANFTQTPERAEAVDFADPYMKVA100
  EEEEEETTTT GGGGTTTEEEEETTTHHHHHHHHHHTTTEEEEE HH 
101 LGVVSPKNKPITDMAQLKDQTLLVNKGTTADAFFTKSHPEVKLLKFDQNT150
  HHHHHHHHTTTTEEEEEHHHHHHHHHTTTTEEEEEEEEEEEEEEEEEETT 
151 ETFDALKDGRGVALAHDNALLWAWAKENPNFEVAIGNLGPAEFIAPAVQK200
  TTHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHTTTTTGGG B  
201 GNADLLNWVNGEIAAMKKDGRLKAAYEKTLLPVYGEKVKPEALLAE 246

links to other protein structure servers for structure 2YJP : PDB - SCOP - CATH - PDBSum - MSD

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