#!/bin/bash
msbar X03038_gene1.fasta A.fasta -point 4 -count 774 -auto
msbar X03038_gene1.fasta H.fasta -point 4 -count 194 -auto
msbar H.fasta F.fasta -point 4 -count 451 -auto
msbar H.fasta G.fasta -point 4 -count 32  -auto
msbar G.fasta E.fasta -point 4 -count 451 -auto
msbar G.fasta T.fasta -point 4 -count 32 -auto
msbar T.fasta D.fasta -point 4 -count 419 -auto
msbar T.fasta P.fasta -point 4 -count 323 -auto
msbar P.fasta B.fasta -point 4 -count 65 -auto
msbar P.fasta C.fasta -point 4 -count 65 -auto