RID: 43XB5REW013 Job Title:Protein Sequence Program: BLASTP Query: unnamed protein product ID: lcl|Query_5031362(amino acid) Length: 1916 Database: nr All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Sequences producing significant alignments: Scientific Common Max Total Query E Per. Acc. Description Name Name Taxid Score Score cover Value Ident Len Accession RecName: Full=Replicase polyprotein 1a; Short=pp1a; AltName:... Bat SARS cor... NA 442736 3971 3971 100% 0.0 100.00 4376 P0C6F8.1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:... Bat SARS cor... NA 442736 3964 3964 100% 0.0 100.00 7067 P0C6W2.1 ORF1ab [Bat SARS coronavirus HKU3] Bat SARS cor... NA 442736 3964 3964 100% 0.0 100.00 7067 QND76018.1 orf1ab polyprotein [Bat SARS coronavirus HKU3-6] Bat SARS cor... NA 742003 3962 3962 100% 0.0 99.95 7067 ADE34743.1 orf1ab polyprotein [Bat SARS coronavirus HKU3-5] Bat SARS cor... NA 742002 3962 3962 100% 0.0 99.95 7067 ADE34732.1 orf1ab polyprotein [Bat SARS coronavirus HKU3-2] Bat SARS cor... NA 338605 3962 3962 100% 0.0 99.95 7067 AAZ41328.1 orf1ab polyprotein [Bat SARS coronavirus HKU3-4] Bat SARS cor... NA 742001 3960 3960 100% 0.0 99.90 7067 ADE34721.1 orf1ab polyprotein [Bat SARS coronavirus HKU3-12] Bat SARS cor... NA 741999 3960 3960 100% 0.0 99.90 7067 ADE34811.1 orf1ab polyprotein [Bat SARS coronavirus HKU3-11] Bat SARS cor... NA 741998 3949 3949 100% 0.0 99.69 7064 ADE34800.1 orf1ab polyprotein [Bat SARS coronavirus HKU3-9] Bat SARS cor... NA 742006 3948 3948 100% 0.0 99.63 7064 ADE34778.1 orf1ab polyprotein [Bat SARS coronavirus HKU3-13] Bat SARS cor... NA 742000 3925 3925 100% 0.0 99.32 7058 ADE34822.1 orf1ab polyprotein [Bat SARS coronavirus HKU3-8] Bat SARS cor... NA 742005 3920 3920 100% 0.0 98.70 7071 ADE34765.1 orf1ab polyprotein [Bat SARS coronavirus HKU3-7] Bat SARS cor... NA 742004 3919 3919 100% 0.0 98.65 7071 ADE34754.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3903 3903 100% 0.0 98.18 7071 QZX47319.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3887 3887 100% 0.0 97.81 7070 QZX47474.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3887 3887 100% 0.0 97.81 7070 QZX47494.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3885 3885 100% 0.0 97.81 7069 QZX47469.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3885 3885 100% 0.0 97.66 7070 QZX47464.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3881 3881 100% 0.0 97.66 7070 QZX47329.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3878 3878 100% 0.0 97.55 7070 QZX47314.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3872 3872 100% 0.0 97.55 7070 QZX47324.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3868 3868 100% 0.0 97.29 7070 QZX47499.1 ORF1a polyprotein [Severe acute respiratory syndrome-related... Severe acute... NA 694009 3866 3866 100% 0.0 96.77 4380 WEG19461.1 ORF1a polyprotein [Severe acute respiratory syndrome-related... Severe acute... NA 694009 3865 3865 100% 0.0 96.77 4380 WEG19471.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3864 3864 100% 0.0 97.14 7070 QZX47459.1 ORF1a protein [Severe acute respiratory syndrome-related... Severe acute... NA 694009 3863 3863 100% 0.0 96.67 4380 WCZ55791.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3860 3860 100% 0.0 96.77 7071 QZX47279.1 ORF1ab polyprotein [Severe acute respiratory syndrome-related... Severe acute... NA 694009 3860 3860 100% 0.0 96.77 7071 WEG19470.1 ORF1ab polyprotein [Severe acute respiratory syndrome-related... Severe acute... NA 694009 3858 3858 100% 0.0 96.77 7071 WEG19460.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3858 3858 100% 0.0 97.13 7067 QZX47454.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3855 3855 100% 0.0 96.61 7071 QZX47374.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3855 3855 100% 0.0 96.61 7071 QZX47349.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3855 3855 100% 0.0 96.61 7071 QZX47354.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3855 3855 100% 0.0 96.61 7071 QZX47379.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3855 3855 100% 0.0 96.61 7071 QZX47339.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3854 3854 100% 0.0 96.56 7071 QZX47344.1 ORF1 protein [Severe acute respiratory syndrome-related... Severe acute... NA 694009 3853 3853 100% 0.0 96.41 4380 WCZ55805.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3852 3852 100% 0.0 96.51 7071 QZX47334.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3849 3849 100% 0.0 96.61 7070 QZX47284.1 orf1a polyprotein [Severe acute respiratory syndrome-related... Severe acute... NA 694009 3843 3843 99% 0.0 95.99 4380 QSI99225.1 ORF1a protein [Severe acute respiratory syndrome-related... Severe acute... NA 694009 3843 3843 100% 0.0 96.25 4375 WCZ55798.1 orf1ab polyprotein [Bat SARS-like coronavirus] Bat SARS-lik... NA 1508227 3841 3841 100% 0.0 96.25 7063 AID16715.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3836 3836 100% 0.0 96.46 7070 QZX47309.1 ORF1a polyprotein [Severe acute respiratory syndrome-related... Severe acute... NA 694009 3836 3836 100% 0.0 96.20 4371 WEG19431.1 orf1ab polyprotein [Severe acute respiratory syndrome-related... Severe acute... NA 694009 3834 3834 99% 0.0 95.99 7071 QSI99215.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3829 3829 100% 0.0 95.89 7070 QZX47409.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3829 3829 100% 0.0 95.94 7071 QZX47394.1 ORF1ab polyprotein [Severe acute respiratory syndrome-related... Severe acute... NA 694009 3828 3828 100% 0.0 96.20 7062 WEG19430.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3827 3827 100% 0.0 95.94 7071 QZX47384.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3827 3827 100% 0.0 95.99 7071 QZX47389.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3826 3826 100% 0.0 95.94 7071 QZX47404.1 ORF1ab polyprotein [Bat betacoronavirus] Bat betacoro... NA 1805463 3823 3823 100% 0.0 95.62 7071 UNO59078.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3821 3821 100% 0.0 95.73 7071 QZX47414.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3820 3820 100% 0.0 95.52 7071 QZX47479.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3816 3816 100% 0.0 95.78 7072 QZX47399.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3809 3809 100% 0.0 95.26 7071 QZX47489.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3804 3804 100% 0.0 95.21 7071 QZX47484.1 ORF1a polyprotein [Severe acute respiratory syndrome-related... Severe acute... NA 694009 3683 3683 100% 0.0 93.91 4379 WEG19451.1 ORF1ab polyprotein [Severe acute respiratory syndrome-related... Severe acute... NA 694009 3671 3671 100% 0.0 93.91 7070 WEG19450.1 ORF1ab polyprotein [Bat Coronavirus RsHB20] Bat Coronavi... NA 3018906 3669 3669 100% 0.0 94.22 7070 WCC63982.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3666 3666 100% 0.0 93.59 7067 QZX47504.1 ORF1ab polyprotein [BtRs-BetaCoV/HuB2013] BtRs-BetaCoV... NA 1503302 3665 3665 100% 0.0 94.43 7070 AIA62309.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3663 3663 100% 0.0 94.38 7070 QZX47449.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3659 3659 99% 0.0 94.53 7069 QZX47574.1 ORF1a protein [Severe acute respiratory syndrome-related... Severe acute... NA 694009 3657 3657 100% 0.0 92.14 4373 WCZ55812.1 ORF1a protein [Bat coronavirus Rp/Shaanxi2011] Bat coronavi... NA 1283332 3655 3655 100% 0.0 93.18 4374 AGC74164.1 ORF1a protein [Severe acute respiratory syndrome-related... Severe acute... NA 694009 3655 3655 100% 0.0 92.08 4373 WCZ55819.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3655 3655 100% 0.0 94.22 7070 QZX47444.1 orf1ab polyprotein [Jingmen Rhinolophus sinicus betacoronaviru... Jingmen Rhin... NA 2877476 3646 3646 100% 0.0 93.70 7070 UBB42404.1 ORF1a polyprotein [Horseshoe bat sarbecovirus] Horseshoe ba... NA 3068538 3632 3632 100% 0.0 92.14 4377 WMT59408.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3631 3631 100% 0.0 93.49 7067 QZX47434.1 ORF1a polyprotein [Horseshoe bat sarbecovirus] Horseshoe ba... NA 3068538 3629 3629 100% 0.0 92.14 4377 WMT59309.1 ORF1ab polyprotein [Horseshoe bat sarbecovirus] Horseshoe ba... NA 3068538 3624 3624 100% 0.0 92.14 7068 WMT59308.1 ORF1ab polyprotein [Horseshoe bat sarbecovirus] Horseshoe ba... NA 3068538 3624 3624 100% 0.0 92.14 7068 WMT59439.1 ORF1ab polyprotein [Horseshoe bat sarbecovirus] Horseshoe ba... NA 3068538 3623 3623 100% 0.0 92.14 7068 WMT59407.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3620 3620 100% 0.0 91.93 7072 QZX47419.1 ORF1a polyprotein [Severe acute respiratory syndrome-related... Severe acute... NA 694009 3615 3615 100% 0.0 91.63 4382 WEG19511.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3612 3612 100% 0.0 92.04 7072 QZX47429.1 non-structural polyprotein 1a [Bat SARS-like coronavirus... Bat SARS-lik... NA 1415851 3612 3612 100% 0.0 91.48 4382 AGZ48804.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3611 3611 100% 0.0 92.04 7072 QZX47424.1 ORF1ab polyprotein [Severe acute respiratory syndrome-related... Severe acute... NA 694009 3606 3606 100% 0.0 91.63 7073 WEG19510.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3606 3606 100% 0.0 92.76 7067 QZX47439.1 ORF1ab [Coronavirus BtRs-BetaCoV/YN2018D] Coronavirus ... NA 2591237 3606 3606 100% 0.0 91.53 7073 QDF43834.1 non-structural polyprotein 1ab [Bat SARS-like coronavirus... Bat SARS-lik... NA 1415851 3605 3605 100% 0.0 91.48 7073 AGZ48805.1 nsp3 [SARS coronavirus Tor2] SARS coronav... NA 227984 3605 3605 100% 0.0 91.47 1922 NP_828862.2 ORF1ab polyprotein [BtRf-BetaCoV/SX2013] BtRf-BetaCoV... NA 1503300 3605 3605 100% 0.0 93.02 7068 AIA62299.1 ORF1ab polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3604 3604 100% 0.0 92.60 7067 QZX47569.1 ORF1ab polyprotein [Bat Coronavirus RsYN20] Bat Coronavi... NA 3018909 3603 3603 100% 0.0 91.94 7073 WCC63994.1 ORF1ab polyprotein [BtRf-BetaCoV/HeB2013] BtRf-BetaCoV... NA 1503296 3601 3601 100% 0.0 92.81 7068 AIA62289.1 non-structural polyprotein 1a [Bat SARS-like coronavirus] Bat SARS-lik... NA 1508227 3601 3601 100% 0.0 91.79 4382 ATO98131.1 ORF1ab polyprotein [BtRs-BetaCoV/YN2013] BtRs-BetaCoV... NA 1503303 3601 3601 100% 0.0 91.94 7073 AIA62329.1 ORF1a polyprotein [Sarbecovirus sp.] Sarbecovirus... NA 2833184 3599 3599 100% 0.0 91.63 4382 UUX91052.1 ORF1a polyprotein [Severe acute respiratory syndrome-related... Severe acute... NA 694009 3598 3598 100% 0.0 91.79 4382 WEG19501.1 non-structural polyprotein 1a [Bat SARS-like coronavirus] Bat SARS-lik... NA 1508227 3595 3595 100% 0.0 91.63 4382 ATO98230.1 non-structural polyprotein 1a [Bat SARS-like coronavirus] Bat SARS-lik... NA 1508227 3594 3594 100% 0.0 91.68 4382 ATO98107.1 non-structural polyprotein 1a [Bat SARS-like coronavirus] Bat SARS-lik... NA 1508227 3593 3593 100% 0.0 91.74 4382 ATO98217.1 non-structural polyprotein 1a [Bat SARS-like coronavirus] Bat SARS-lik... NA 1508227 3593 3593 100% 0.0 91.63 4382 ATO98156.1 non-structural polyprotein 1a [Bat SARS-like coronavirus] Bat SARS-lik... NA 1508227 3593 3593 100% 0.0 91.74 4382 ATO98119.1 non-structural polyprotein 1ab [Bat SARS-like coronavirus] Bat SARS-lik... NA 1508227 3593 3593 100% 0.0 91.79 7073 ATO98130.1 non-structural polyprotein 1a [Bat SARS-like coronavirus] Bat SARS-lik... NA 1508227 3592 3592 100% 0.0 91.68 4382 ATO98180.1 Alignments: >RecName: Full=Replicase polyprotein 1a; Short=pp1a; AltName: Full=ORF1a polyprotein; Contains: RecName: Full=Non-structural protein 1; Short=nsp1; AltName: Full=Leader protein; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65 homolog; Contains: RecName: Full=Papain-like protease nsp3; Short=PL-PRO; AltName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=PL2-PRO; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; Contains: RecName: Full=3C-like proteinase nsp5; Short=3CL-PRO; Short=3CLp; AltName: Full=nsp5; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; Contains: RecName: Full=RNA-capping enzyme subunit nsp9; AltName: Full=Non-structural protein 9; Short=nsp9; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; Contains: RecName: Full=Non-structural protein 11; Short=nsp11 [Bat SARS coronavirus HKU3] Sequence ID: P0C6F8.1 Length: 4376 >replicase polyprotein 1A [recombinant coronavirus] Sequence ID: ACJ60693.1 Length: 4376 >ORF1a [Bat SARS coronavirus HKU3] Sequence ID: QND76019.1 Length: 4376 >ORF1a [Bat SARS coronavirus HKU3] Sequence ID: QND76033.1 Length: 4376 Range 1: 819 to 2734 Score:3971 bits(10298), Expect:0.0, Method:Compositional matrix adjust., Identities:1916/1916(100%), Positives:1916/1916(100%), Gaps:0/1916(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV 180 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV Sbjct 939 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV 998 Query 181 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN 240 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN Sbjct 999 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN 1058 Query 241 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL 300 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL Sbjct 1059 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL 1118 Query 301 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE 360 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE Sbjct 1119 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE 1178 Query 361 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ 420 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ Sbjct 1179 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ 1238 Query 421 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT 480 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT Sbjct 1239 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT 1298 Query 481 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL 540 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL Sbjct 1299 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL 1358 Query 541 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM 600 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM Sbjct 1359 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM 1418 Query 601 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA 660 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA Sbjct 1419 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA 1478 Query 661 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT 720 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT Sbjct 1479 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT 1538 Query 721 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL 780 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL Sbjct 1539 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL 1598 Query 781 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE 840 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE Sbjct 1599 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE 1658 Query 841 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV 900 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV Sbjct 1659 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV 1718 Query 901 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM 960 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM Sbjct 1719 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM 1778 Query 961 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF 1020 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF Sbjct 1779 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF 1838 Query 1021 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN 1080 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN Sbjct 1839 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN 1898 Query 1081 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH 1140 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH Sbjct 1899 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH 1958 Query 1141 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT 1200 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT Sbjct 1959 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT 2018 Query 1201 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI 1260 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI Sbjct 2019 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI 2078 Query 1261 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN 1320 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN Sbjct 2079 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN 2138 Query 1321 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF 1380 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF Sbjct 2139 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF 2198 Query 1381 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP 1440 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP Sbjct 2199 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP 2258 Query 1441 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM 1500 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM Sbjct 2259 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM 2318 Query 1501 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS 1560 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS Sbjct 2319 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS 2378 Query 1561 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD 1620 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD Sbjct 2379 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD 2438 Query 1621 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL 1680 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL Sbjct 2439 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL 2498 Query 1681 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS 1740 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS Sbjct 2499 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS 2558 Query 1741 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD 1800 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD Sbjct 2559 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD 2618 Query 1801 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH 1860 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH Sbjct 2619 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH 2678 Query 1861 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2734 >RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Host translation inhibitor nsp1; Short=nsp1; AltName: Full=Leader protein; Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65 homolog; Contains: RecName: Full=Papain-like proteinase nsp3; Short=PL-PRO; AltName: Full=Non-structural protein 3; Short=nsp3; Contains: RecName: Full=Non-structural protein 4; Short=nsp4; Contains: RecName: Full=3C-like proteinase nsp5; Short=3CL-PRO; Short=3CLp; AltName: Full=nsp5; Contains: RecName: Full=Non-structural protein 6; Short=nsp6; Contains: RecName: Full=Non-structural protein 7; Short=nsp7; Contains: RecName: Full=Non-structural protein 8; Short=nsp8; Contains: RecName: Full=Viral protein genome-linked nsp9; AltName: Full=Non-structural protein 9; Short=nsp9; AltName: Full=RNA-capping enzyme subunit nsp9; AltName: Full=p12; Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL; Contains: RecName: Full=RNA-directed RNA polymerase nsp12; Short=Pol; Short=RdRp; AltName: Full=nsp12; Contains: RecName: Full=Helicase nsp13; Short=Hel; AltName: Full=nsp13; Contains: RecName: Full=Guanine-N7 methyltransferase nsp14; Short=ExoN; AltName: Full=nsp14; Contains: RecName: Full=Uridylate-specific endoribonuclease nsp15; AltName: Full=NendoU; AltName: Full=nsp15; Contains: RecName: Full=2'-O-methyltransferase nsp16; AltName: Full=nsp16 [Bat SARS coronavirus HKU3] Sequence ID: P0C6W2.1 Length: 7067 >orf1ab polyprotein [Bat SARS coronavirus HKU3-1] Sequence ID: AAY88865.2 Length: 7067 >orf1ab polyprotein [Bat SARS coronavirus HKU3-3] Sequence ID: AAZ41339.1 Length: 7067 Range 1: 819 to 2734 Score:3964 bits(10281), Expect:0.0, Method:Compositional matrix adjust., Identities:1916/1916(100%), Positives:1916/1916(100%), Gaps:0/1916(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV 180 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV Sbjct 939 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV 998 Query 181 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN 240 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN Sbjct 999 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN 1058 Query 241 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL 300 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL Sbjct 1059 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL 1118 Query 301 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE 360 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE Sbjct 1119 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE 1178 Query 361 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ 420 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ Sbjct 1179 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ 1238 Query 421 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT 480 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT Sbjct 1239 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT 1298 Query 481 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL 540 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL Sbjct 1299 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL 1358 Query 541 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM 600 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM Sbjct 1359 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM 1418 Query 601 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA 660 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA Sbjct 1419 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA 1478 Query 661 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT 720 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT Sbjct 1479 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT 1538 Query 721 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL 780 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL Sbjct 1539 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL 1598 Query 781 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE 840 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE Sbjct 1599 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE 1658 Query 841 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV 900 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV Sbjct 1659 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV 1718 Query 901 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM 960 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM Sbjct 1719 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM 1778 Query 961 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF 1020 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF Sbjct 1779 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF 1838 Query 1021 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN 1080 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN Sbjct 1839 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN 1898 Query 1081 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH 1140 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH Sbjct 1899 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH 1958 Query 1141 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT 1200 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT Sbjct 1959 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT 2018 Query 1201 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI 1260 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI Sbjct 2019 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI 2078 Query 1261 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN 1320 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN Sbjct 2079 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN 2138 Query 1321 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF 1380 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF Sbjct 2139 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF 2198 Query 1381 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP 1440 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP Sbjct 2199 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP 2258 Query 1441 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM 1500 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM Sbjct 2259 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM 2318 Query 1501 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS 1560 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS Sbjct 2319 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS 2378 Query 1561 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD 1620 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD Sbjct 2379 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD 2438 Query 1621 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL 1680 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL Sbjct 2439 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL 2498 Query 1681 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS 1740 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS Sbjct 2499 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS 2558 Query 1741 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD 1800 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD Sbjct 2559 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD 2618 Query 1801 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH 1860 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH Sbjct 2619 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH 2678 Query 1861 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2734 >ORF1ab [Bat SARS coronavirus HKU3] Sequence ID: QND76018.1 Length: 7067 >ORF1ab [Bat SARS coronavirus HKU3] Sequence ID: QND76032.1 Length: 7067 Range 1: 819 to 2734 Score:3964 bits(10281), Expect:0.0, Method:Compositional matrix adjust., Identities:1916/1916(100%), Positives:1916/1916(100%), Gaps:0/1916(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV 180 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV Sbjct 939 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV 998 Query 181 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN 240 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN Sbjct 999 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN 1058 Query 241 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL 300 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL Sbjct 1059 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL 1118 Query 301 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE 360 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE Sbjct 1119 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE 1178 Query 361 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ 420 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ Sbjct 1179 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ 1238 Query 421 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT 480 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT Sbjct 1239 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT 1298 Query 481 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL 540 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL Sbjct 1299 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL 1358 Query 541 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM 600 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM Sbjct 1359 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM 1418 Query 601 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA 660 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA Sbjct 1419 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA 1478 Query 661 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT 720 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT Sbjct 1479 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT 1538 Query 721 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL 780 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL Sbjct 1539 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL 1598 Query 781 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE 840 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE Sbjct 1599 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE 1658 Query 841 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV 900 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV Sbjct 1659 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV 1718 Query 901 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM 960 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM Sbjct 1719 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM 1778 Query 961 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF 1020 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF Sbjct 1779 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF 1838 Query 1021 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN 1080 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN Sbjct 1839 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN 1898 Query 1081 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH 1140 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH Sbjct 1899 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH 1958 Query 1141 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT 1200 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT Sbjct 1959 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT 2018 Query 1201 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI 1260 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI Sbjct 2019 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI 2078 Query 1261 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN 1320 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN Sbjct 2079 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN 2138 Query 1321 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF 1380 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF Sbjct 2139 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF 2198 Query 1381 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP 1440 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP Sbjct 2199 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP 2258 Query 1441 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM 1500 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM Sbjct 2259 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM 2318 Query 1501 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS 1560 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS Sbjct 2319 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS 2378 Query 1561 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD 1620 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD Sbjct 2379 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD 2438 Query 1621 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL 1680 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL Sbjct 2439 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL 2498 Query 1681 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS 1740 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS Sbjct 2499 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS 2558 Query 1741 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD 1800 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD Sbjct 2559 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD 2618 Query 1801 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH 1860 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH Sbjct 2619 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH 2678 Query 1861 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2734 >orf1ab polyprotein [Bat SARS coronavirus HKU3-6] Sequence ID: ADE34743.1 Length: 7067 Range 1: 819 to 2734 Score:3962 bits(10274), Expect:0.0, Method:Compositional matrix adjust., Identities:1915/1916(99%), Positives:1915/1916(99%), Gaps:0/1916(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV 180 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV Sbjct 939 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV 998 Query 181 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN 240 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN Sbjct 999 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN 1058 Query 241 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL 300 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL Sbjct 1059 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL 1118 Query 301 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE 360 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE Sbjct 1119 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE 1178 Query 361 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ 420 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ Sbjct 1179 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ 1238 Query 421 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT 480 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT Sbjct 1239 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT 1298 Query 481 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL 540 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL Sbjct 1299 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL 1358 Query 541 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM 600 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM Sbjct 1359 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM 1418 Query 601 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA 660 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA Sbjct 1419 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA 1478 Query 661 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT 720 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT Sbjct 1479 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT 1538 Query 721 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL 780 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL Sbjct 1539 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL 1598 Query 781 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE 840 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE Sbjct 1599 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE 1658 Query 841 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV 900 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV Sbjct 1659 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV 1718 Query 901 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM 960 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM Sbjct 1719 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM 1778 Query 961 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF 1020 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF Sbjct 1779 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF 1838 Query 1021 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN 1080 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN Sbjct 1839 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN 1898 Query 1081 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH 1140 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH Sbjct 1899 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH 1958 Query 1141 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT 1200 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT Sbjct 1959 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT 2018 Query 1201 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI 1260 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI Sbjct 2019 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI 2078 Query 1261 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN 1320 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN Sbjct 2079 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN 2138 Query 1321 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF 1380 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF Sbjct 2139 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF 2198 Query 1381 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP 1440 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP Sbjct 2199 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP 2258 Query 1441 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM 1500 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM Sbjct 2259 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM 2318 Query 1501 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS 1560 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS Sbjct 2319 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS 2378 Query 1561 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD 1620 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD Sbjct 2379 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD 2438 Query 1621 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL 1680 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL Sbjct 2439 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL 2498 Query 1681 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS 1740 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS Sbjct 2499 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS 2558 Query 1741 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD 1800 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD Sbjct 2559 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD 2618 Query 1801 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH 1860 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH Sbjct 2619 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH 2678 Query 1861 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2734 >orf1ab polyprotein [Bat SARS coronavirus HKU3-5] Sequence ID: ADE34732.1 Length: 7067 Range 1: 819 to 2734 Score:3962 bits(10274), Expect:0.0, Method:Compositional matrix adjust., Identities:1915/1916(99%), Positives:1915/1916(99%), Gaps:0/1916(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV 180 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV Sbjct 939 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV 998 Query 181 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN 240 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN Sbjct 999 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN 1058 Query 241 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL 300 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL Sbjct 1059 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL 1118 Query 301 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE 360 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE Sbjct 1119 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE 1178 Query 361 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ 420 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ Sbjct 1179 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ 1238 Query 421 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT 480 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT Sbjct 1239 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT 1298 Query 481 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL 540 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL Sbjct 1299 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL 1358 Query 541 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM 600 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM Sbjct 1359 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM 1418 Query 601 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA 660 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA Sbjct 1419 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA 1478 Query 661 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT 720 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT Sbjct 1479 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT 1538 Query 721 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL 780 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL Sbjct 1539 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL 1598 Query 781 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE 840 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE Sbjct 1599 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE 1658 Query 841 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV 900 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV Sbjct 1659 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV 1718 Query 901 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM 960 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM Sbjct 1719 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM 1778 Query 961 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF 1020 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF Sbjct 1779 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF 1838 Query 1021 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN 1080 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN Sbjct 1839 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN 1898 Query 1081 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH 1140 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH Sbjct 1899 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH 1958 Query 1141 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT 1200 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT Sbjct 1959 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT 2018 Query 1201 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI 1260 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI Sbjct 2019 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI 2078 Query 1261 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN 1320 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN Sbjct 2079 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN 2138 Query 1321 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF 1380 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF Sbjct 2139 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF 2198 Query 1381 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP 1440 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP Sbjct 2199 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP 2258 Query 1441 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM 1500 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM Sbjct 2259 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM 2318 Query 1501 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS 1560 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS Sbjct 2319 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS 2378 Query 1561 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD 1620 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD Sbjct 2379 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD 2438 Query 1621 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL 1680 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL Sbjct 2439 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL 2498 Query 1681 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS 1740 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS Sbjct 2499 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS 2558 Query 1741 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD 1800 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD Sbjct 2559 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD 2618 Query 1801 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH 1860 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH Sbjct 2619 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH 2678 Query 1861 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2734 >orf1ab polyprotein [Bat SARS coronavirus HKU3-2] Sequence ID: AAZ41328.1 Length: 7067 Range 1: 819 to 2734 Score:3962 bits(10274), Expect:0.0, Method:Compositional matrix adjust., Identities:1915/1916(99%), Positives:1915/1916(99%), Gaps:0/1916(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV 180 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV Sbjct 939 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV 998 Query 181 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN 240 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN Sbjct 999 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN 1058 Query 241 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL 300 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL Sbjct 1059 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL 1118 Query 301 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE 360 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE Sbjct 1119 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE 1178 Query 361 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ 420 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ Sbjct 1179 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ 1238 Query 421 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT 480 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT Sbjct 1239 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT 1298 Query 481 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL 540 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL Sbjct 1299 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL 1358 Query 541 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM 600 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM Sbjct 1359 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM 1418 Query 601 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA 660 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA Sbjct 1419 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA 1478 Query 661 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT 720 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT Sbjct 1479 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT 1538 Query 721 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL 780 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL Sbjct 1539 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL 1598 Query 781 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE 840 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE Sbjct 1599 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE 1658 Query 841 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV 900 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV Sbjct 1659 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV 1718 Query 901 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM 960 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM Sbjct 1719 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM 1778 Query 961 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF 1020 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF Sbjct 1779 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF 1838 Query 1021 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN 1080 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN Sbjct 1839 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN 1898 Query 1081 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH 1140 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH Sbjct 1899 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH 1958 Query 1141 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT 1200 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT Sbjct 1959 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT 2018 Query 1201 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI 1260 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI Sbjct 2019 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI 2078 Query 1261 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN 1320 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN Sbjct 2079 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN 2138 Query 1321 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF 1380 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF Sbjct 2139 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF 2198 Query 1381 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP 1440 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP Sbjct 2199 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP 2258 Query 1441 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM 1500 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM Sbjct 2259 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM 2318 Query 1501 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS 1560 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS Sbjct 2319 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS 2378 Query 1561 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD 1620 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD Sbjct 2379 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD 2438 Query 1621 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL 1680 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL Sbjct 2439 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL 2498 Query 1681 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS 1740 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS Sbjct 2499 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS 2558 Query 1741 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD 1800 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD Sbjct 2559 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD 2618 Query 1801 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH 1860 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH Sbjct 2619 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH 2678 Query 1861 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2734 >orf1ab polyprotein [Bat SARS coronavirus HKU3-4] Sequence ID: ADE34721.1 Length: 7067 Range 1: 819 to 2734 Score:3960 bits(10270), Expect:0.0, Method:Compositional matrix adjust., Identities:1914/1916(99%), Positives:1914/1916(99%), Gaps:0/1916(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV 180 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV Sbjct 939 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV 998 Query 181 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN 240 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN Sbjct 999 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN 1058 Query 241 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL 300 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL Sbjct 1059 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL 1118 Query 301 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE 360 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE Sbjct 1119 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE 1178 Query 361 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ 420 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ Sbjct 1179 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ 1238 Query 421 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT 480 NMLRGEDMSFLEKDAPYIVGDVI SGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT Sbjct 1239 NMLRGEDMSFLEKDAPYIVGDVINSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT 1298 Query 481 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL 540 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL Sbjct 1299 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL 1358 Query 541 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM 600 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM Sbjct 1359 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM 1418 Query 601 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA 660 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA Sbjct 1419 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA 1478 Query 661 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT 720 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT Sbjct 1479 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT 1538 Query 721 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL 780 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL Sbjct 1539 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL 1598 Query 781 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE 840 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE Sbjct 1599 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE 1658 Query 841 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV 900 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV Sbjct 1659 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV 1718 Query 901 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM 960 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM Sbjct 1719 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM 1778 Query 961 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF 1020 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF Sbjct 1779 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF 1838 Query 1021 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN 1080 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN Sbjct 1839 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN 1898 Query 1081 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH 1140 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH Sbjct 1899 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH 1958 Query 1141 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT 1200 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT Sbjct 1959 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT 2018 Query 1201 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI 1260 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI Sbjct 2019 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI 2078 Query 1261 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN 1320 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN Sbjct 2079 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN 2138 Query 1321 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF 1380 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF Sbjct 2139 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF 2198 Query 1381 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP 1440 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP Sbjct 2199 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP 2258 Query 1441 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM 1500 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM Sbjct 2259 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM 2318 Query 1501 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS 1560 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS Sbjct 2319 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS 2378 Query 1561 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD 1620 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD Sbjct 2379 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD 2438 Query 1621 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL 1680 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL Sbjct 2439 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL 2498 Query 1681 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS 1740 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS Sbjct 2499 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS 2558 Query 1741 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD 1800 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD Sbjct 2559 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD 2618 Query 1801 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH 1860 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH Sbjct 2619 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH 2678 Query 1861 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2734 >orf1ab polyprotein [Bat SARS coronavirus HKU3-12] Sequence ID: ADE34811.1 Length: 7067 Range 1: 819 to 2734 Score:3960 bits(10269), Expect:0.0, Method:Compositional matrix adjust., Identities:1914/1916(99%), Positives:1914/1916(99%), Gaps:0/1916(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV 180 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV Sbjct 939 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV 998 Query 181 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN 240 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN Sbjct 999 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN 1058 Query 241 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL 300 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL Sbjct 1059 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL 1118 Query 301 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE 360 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE Sbjct 1119 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE 1178 Query 361 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ 420 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ Sbjct 1179 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ 1238 Query 421 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT 480 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT Sbjct 1239 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT 1298 Query 481 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL 540 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL Sbjct 1299 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL 1358 Query 541 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM 600 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM Sbjct 1359 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM 1418 Query 601 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA 660 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA Sbjct 1419 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA 1478 Query 661 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT 720 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT Sbjct 1479 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT 1538 Query 721 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL 780 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL Sbjct 1539 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL 1598 Query 781 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE 840 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE Sbjct 1599 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE 1658 Query 841 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV 900 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV Sbjct 1659 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV 1718 Query 901 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM 960 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM Sbjct 1719 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM 1778 Query 961 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF 1020 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF Sbjct 1779 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF 1838 Query 1021 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN 1080 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN Sbjct 1839 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN 1898 Query 1081 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH 1140 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH Sbjct 1899 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH 1958 Query 1141 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT 1200 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT Sbjct 1959 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT 2018 Query 1201 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI 1260 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI Sbjct 2019 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI 2078 Query 1261 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN 1320 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN Sbjct 2079 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN 2138 Query 1321 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF 1380 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF Sbjct 2139 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF 2198 Query 1381 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP 1440 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP Sbjct 2199 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP 2258 Query 1441 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM 1500 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM Sbjct 2259 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM 2318 Query 1501 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS 1560 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS Sbjct 2319 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS 2378 Query 1561 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD 1620 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD Sbjct 2379 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD 2438 Query 1621 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL 1680 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL Sbjct 2439 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL 2498 Query 1681 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS 1740 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS Sbjct 2499 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS 2558 Query 1741 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD 1800 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD Sbjct 2559 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD 2618 Query 1801 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH 1860 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH Sbjct 2619 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH 2678 Query 1861 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPF LTCATTRQVVNVITTKISLKGG Sbjct 2679 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFSLTCATTRQVVNVITTKISLKGG 2734 >orf1ab polyprotein [Bat SARS coronavirus HKU3-11] Sequence ID: ADE34800.1 Length: 7064 Range 1: 819 to 2731 Score:3949 bits(10240), Expect:0.0, Method:Compositional matrix adjust., Identities:1910/1916(99%), Positives:1912/1916(99%), Gaps:3/1916(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV 180 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV Sbjct 939 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV 998 Query 181 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN 240 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN Sbjct 999 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN 1058 Query 241 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL 300 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL Sbjct 1059 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL 1118 Query 301 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE 360 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE Sbjct 1119 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE 1178 Query 361 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ 420 EPKLEEPKAVQPVAEKPVD +IKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ Sbjct 1179 EPKLEEPKAVQPVAEKPVD---EIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ 1235 Query 421 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT 480 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT Sbjct 1236 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT 1295 Query 481 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL 540 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL Sbjct 1296 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL 1355 Query 541 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM 600 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM Sbjct 1356 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM 1415 Query 601 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA 660 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA Sbjct 1416 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA 1475 Query 661 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT 720 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT Sbjct 1476 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT 1535 Query 721 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL 780 IKVFTTVD+TNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL Sbjct 1536 IKVFTTVDSTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL 1595 Query 781 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE 840 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE Sbjct 1596 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE 1655 Query 841 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV 900 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV Sbjct 1656 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV 1715 Query 901 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM 960 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM Sbjct 1716 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM 1775 Query 961 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF 1020 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF Sbjct 1776 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF 1835 Query 1021 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN 1080 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN Sbjct 1836 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN 1895 Query 1081 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH 1140 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH Sbjct 1896 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH 1955 Query 1141 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT 1200 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT Sbjct 1956 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT 2015 Query 1201 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI 1260 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI Sbjct 2016 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI 2075 Query 1261 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN 1320 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN Sbjct 2076 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN 2135 Query 1321 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF 1380 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF Sbjct 2136 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF 2195 Query 1381 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP 1440 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP Sbjct 2196 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP 2255 Query 1441 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM 1500 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM Sbjct 2256 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM 2315 Query 1501 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS 1560 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS Sbjct 2316 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS 2375 Query 1561 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD 1620 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD Sbjct 2376 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD 2435 Query 1621 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL 1680 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL Sbjct 2436 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL 2495 Query 1681 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS 1740 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS Sbjct 2496 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS 2555 Query 1741 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD 1800 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD Sbjct 2556 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD 2615 Query 1801 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH 1860 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH Sbjct 2616 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH 2675 Query 1861 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2676 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2731 >orf1ab polyprotein [Bat SARS coronavirus HKU3-9] Sequence ID: ADE34778.1 Length: 7064 >orf1ab polyprotein [Bat SARS coronavirus HKU3-10] Sequence ID: ADE34789.1 Length: 7064 Range 1: 819 to 2731 Score:3948 bits(10238), Expect:0.0, Method:Compositional matrix adjust., Identities:1909/1916(99%), Positives:1912/1916(99%), Gaps:3/1916(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV 180 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV Sbjct 939 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV 998 Query 181 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN 240 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN Sbjct 999 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN 1058 Query 241 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL 300 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL Sbjct 1059 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL 1118 Query 301 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE 360 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE Sbjct 1119 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE 1178 Query 361 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ 420 EPKLEEPKAVQPVAEKPVD +IKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ Sbjct 1179 EPKLEEPKAVQPVAEKPVD---EIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ 1235 Query 421 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT 480 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT Sbjct 1236 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT 1295 Query 481 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL 540 YPGQGCAGYTLEEAKTALK+CKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL Sbjct 1296 YPGQGCAGYTLEEAKTALKRCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL 1355 Query 541 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM 600 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM Sbjct 1356 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM 1415 Query 601 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA 660 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA Sbjct 1416 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA 1475 Query 661 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT 720 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT Sbjct 1476 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT 1535 Query 721 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL 780 IKVFTTVD+TNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL Sbjct 1536 IKVFTTVDSTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL 1595 Query 781 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE 840 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE Sbjct 1596 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE 1655 Query 841 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV 900 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV Sbjct 1656 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV 1715 Query 901 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM 960 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM Sbjct 1716 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM 1775 Query 961 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF 1020 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF Sbjct 1776 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF 1835 Query 1021 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN 1080 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN Sbjct 1836 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN 1895 Query 1081 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH 1140 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH Sbjct 1896 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH 1955 Query 1141 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT 1200 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT Sbjct 1956 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT 2015 Query 1201 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI 1260 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI Sbjct 2016 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI 2075 Query 1261 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN 1320 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN Sbjct 2076 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN 2135 Query 1321 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF 1380 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF Sbjct 2136 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF 2195 Query 1381 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP 1440 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP Sbjct 2196 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP 2255 Query 1441 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM 1500 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM Sbjct 2256 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM 2315 Query 1501 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS 1560 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS Sbjct 2316 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS 2375 Query 1561 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD 1620 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD Sbjct 2376 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD 2435 Query 1621 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL 1680 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL Sbjct 2436 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL 2495 Query 1681 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS 1740 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS Sbjct 2496 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS 2555 Query 1741 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD 1800 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD Sbjct 2556 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD 2615 Query 1801 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH 1860 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH Sbjct 2616 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH 2675 Query 1861 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2676 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2731 >orf1ab polyprotein [Bat SARS coronavirus HKU3-13] Sequence ID: ADE34822.1 Length: 7058 Range 1: 819 to 2725 Score:3925 bits(10180), Expect:0.0, Method:Compositional matrix adjust., Identities:1903/1916(99%), Positives:1905/1916(99%), Gaps:9/1916(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPP EECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPP------EECE 932 Query 121 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV 180 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV Sbjct 933 DEEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEPV 992 Query 181 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN 240 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN Sbjct 993 NQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQN 1052 Query 241 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL 300 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL Sbjct 1053 ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVLL 1112 Query 301 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE 360 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE Sbjct 1113 APLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKEE 1172 Query 361 EPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ 420 EPKLEEPKAVQPVAEKPVD +IKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ Sbjct 1173 EPKLEEPKAVQPVAEKPVD---EIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDSQ 1229 Query 421 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT 480 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT Sbjct 1230 NMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYITT 1289 Query 481 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL 540 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL Sbjct 1290 YPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRKL 1349 Query 541 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM 600 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM Sbjct 1350 MPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM 1409 Query 601 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA 660 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA Sbjct 1410 PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSLA 1469 Query 661 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT 720 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT Sbjct 1470 GSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVKT 1529 Query 721 IKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL 780 IKVFTTVD+TNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL Sbjct 1530 IKVFTTVDSTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTL 1589 Query 781 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE 840 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE Sbjct 1590 RSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQVE 1649 Query 841 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV 900 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV Sbjct 1650 VKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRV 1709 Query 901 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM 960 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM Sbjct 1710 LNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVMM 1769 Query 961 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF 1020 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF Sbjct 1770 SAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDVF 1829 Query 1021 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN 1080 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN Sbjct 1830 YKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFDN 1889 Query 1081 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH 1140 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH Sbjct 1890 FKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLVH 1949 Query 1141 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT 1200 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT Sbjct 1950 KPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTTT 2009 Query 1201 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI 1260 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI Sbjct 2010 SEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSITI 2069 Query 1261 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN 1320 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN Sbjct 2070 KKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFSN 2129 Query 1321 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF 1380 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF Sbjct 2130 YMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKLF 2189 Query 1381 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYFP 1440 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRE YINSSNVTTMDFCQGYFP Sbjct 2190 TIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRESYINSSNVTTMDFCQGYFP 2249 Query 1441 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM 1500 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM Sbjct 2250 CSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAIM 2309 Query 1501 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS 1560 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS Sbjct 2310 QAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTSS 2369 Query 1561 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD 1620 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD Sbjct 2370 TCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFISD 2429 Query 1621 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL 1680 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL Sbjct 2430 EVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDNL 2489 Query 1681 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS 1740 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS Sbjct 2490 RANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEVS 2549 Query 1741 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD 1800 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD Sbjct 2550 VKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVD 2609 Query 1801 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH 1860 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH Sbjct 2610 TKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSH 2669 Query 1861 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2670 NVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2725 >orf1ab polyprotein [Bat SARS coronavirus HKU3-8] Sequence ID: ADE34765.1 Length: 7071 Range 1: 819 to 2738 Score:3920 bits(10167), Expect:0.0, Method:Compositional matrix adjust., Identities:1895/1920(99%), Positives:1902/1920(99%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEEE TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAE EPEPLP Sbjct 939 DEEEISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAESEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VR QVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 DVLLAPLLSAGIFGAKPLQSLKMCVETVRAQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 NKEEEPKLEEPKAVQPV EKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 NKEEEPKLEEPKAVQPVVEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTT+MLARALK+VPVAE Sbjct 1239 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTDMLARALKKVPVAE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1359 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEE ARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEETARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQPMPNA Sbjct 1839 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPMPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA Sbjct 1899 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSF VLVVEDTQGMDNLACES Sbjct 1959 KLLHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFGVLVVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET Sbjct 2019 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR Sbjct 2079 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2139 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTIVMWLLLLS CLGSLTYVTA LGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ Sbjct 2199 SKLFTIVMWLLLLSTCLGSLTYVTAALGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL Sbjct 2259 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTF+S ARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFMSTARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >orf1ab polyprotein [Bat SARS coronavirus HKU3-7] Sequence ID: ADE34754.1 Length: 7071 Range 1: 819 to 2738 Score:3919 bits(10162), Expect:0.0, Method:Compositional matrix adjust., Identities:1894/1920(99%), Positives:1902/1920(99%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGE+TVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGENTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEEE TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAE EPEPLP Sbjct 939 DEEEISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAESEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VR QVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 DVLLAPLLSAGIFGAKPLQSLKMCVETVRAQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 NKEEEPKLEEPKAVQPV EKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 NKEEEPKLEEPKAVQPVVEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTT+MLARALK+VPVAE Sbjct 1239 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTDMLARALKKVPVAE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1359 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEE ARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEETARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQPMPNA Sbjct 1839 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPMPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA Sbjct 1899 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSF VLVVEDTQGMDNLACES Sbjct 1959 KLLHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFGVLVVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET Sbjct 2019 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR Sbjct 2079 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2139 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTIVMWLLLLS CLGSLTYVTA LGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ Sbjct 2199 SKLFTIVMWLLLLSTCLGSLTYVTAALGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL Sbjct 2259 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTF+S ARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFMSTARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47319.1 Length: 7071 Range 1: 819 to 2738 Score:3903 bits(10121), Expect:0.0, Method:Compositional matrix adjust., Identities:1885/1920(98%), Positives:1895/1920(98%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEQISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIR+NGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRKNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 NKEEEPKLEEPKAVQPVAE+PVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 NKEEEPKLEEPKAVQPVAERPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPVAE Sbjct 1239 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVAE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYG RFFFYTSKEPVASIITKLNSLNEP Sbjct 1359 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGARFFFYTSKEPVASIITKLNSLNEP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGV YTEIEPKLDGYYKK NAYYTEQPIDLVPTQPMPNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVIYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPMPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPN WCLRCLWSTKPVDTSN+FEVL VEDTQGMD LACES Sbjct 1959 KLLHKPILWHINQTTNKTTYKPNTWCLRCLWSTKPVDTSNTFEVLAVEDTQGMDTLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKE+IECDVKTTEVVGNVILKPSE GVKVT EL HEDLMAAYVEET Sbjct 2019 QTTTSEEVVENPTVQKEVIECDVKTTEVVGNVILKPSEAGVKVTSELCHEDLMAAYVEET 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQ AVITSNCIKKCVQR Sbjct 2079 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQAAVITSNCIKKCVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2139 VFNNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTIVMWLLLLSICLGSLTYVTA GVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ Sbjct 2199 SKLFTIVMWLLLLSICLGSLTYVTAAFGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL Sbjct 2259 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLK LVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKTLVATAHSELAKGVALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47474.1 Length: 7070 Range 1: 819 to 2737 Score:3887 bits(10080), Expect:0.0, Method:Compositional matrix adjust., Identities:1878/1920(98%), Positives:1893/1920(98%), Gaps:5/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEEE TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEEILEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSA+PTVIVNAAN HLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSARPTVIVNAANIHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESDEYIRQNGPL VGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQIESDEYIRQNGPLIVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 K+EEPKLEEPK VQPVAE+PVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 -KKEEPKLEEPKEVQPVAERPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1237 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV+E Sbjct 1238 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVSE 1297 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1298 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1357 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYG RFFFYTSKEPVASIITKLNSLNEP Sbjct 1358 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGSRFFFYTSKEPVASIITKLNSLNEP 1417 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1418 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1477 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1478 ISLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 1537 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1538 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1597 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1598 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1657 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1658 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1717 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQK TTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1718 AKRVLNVVCKHCGQKITTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1777 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1778 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1837 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQPMPNA Sbjct 1838 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPMPNA 1897 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1898 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1957 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPN WCLRCLWSTKP+DTSN+FEVL VEDTQGMDNLACES Sbjct 1958 KLLHKPILWHINQTTNKTTYKPNTWCLRCLWSTKPLDTSNTFEVLAVEDTQGMDNLACES 2017 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKP+EEGVK+T ELGHEDLMAAYVEET Sbjct 2018 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPAEEGVKITPELGHEDLMAAYVEET 2077 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHG AAINSVPWSKILAYVKPFLGQ AVITSNCIKKCVQR Sbjct 2078 SITIKKPNELSLALGLKTLATHGTAAINSVPWSKILAYVKPFLGQAAVITSNCIKKCVQR 2137 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2138 VFNNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2197 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTIVMWLLLLSICLGSLTYV A LGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ Sbjct 2198 SKLFTIVMWLLLLSICLGSLTYVIAALGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 2257 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL Sbjct 2258 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 2317 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG Sbjct 2318 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 2377 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST Sbjct 2378 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 2437 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2438 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 2497 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2498 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2557 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2558 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2617 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDI+VTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2618 TDVDTKDVIECLKLSHHSDIDVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2677 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2678 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2737 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47494.1 Length: 7070 Range 1: 819 to 2737 Score:3887 bits(10079), Expect:0.0, Method:Compositional matrix adjust., Identities:1878/1920(98%), Positives:1892/1920(98%), Gaps:5/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDDRVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEEE TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEEISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSA+PTVIVNAAN HLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSARPTVIVNAANIHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESD YIRQNGPL VGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQIESDAYIRQNGPLIVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 K+EEPKLEEPK VQPVAE+PVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 -KKEEPKLEEPKEVQPVAERPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1237 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV+E Sbjct 1238 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVSE 1297 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1298 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1357 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1358 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1417 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1418 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1477 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1478 ISLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 1537 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1538 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1597 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1598 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1657 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1658 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1717 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1718 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1777 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1778 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1837 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQPMPNA Sbjct 1838 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPMPNA 1897 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1898 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1957 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPN WCLRCLWSTKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1958 KLLHKPILWHINQTTNKTTYKPNTWCLRCLWSTKPVDTSNTFEVLAVEDTQGMDNLACES 2017 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKP+EEGVK+T ELGHEDLMAAYVEET Sbjct 2018 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPAEEGVKITPELGHEDLMAAYVEET 2077 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHG AAINSVPWSKILAYVKPFLGQ AVITSNCIKKCVQR Sbjct 2078 SITIKKPNELSLALGLKTLATHGTAAINSVPWSKILAYVKPFLGQAAVITSNCIKKCVQR 2137 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSV KLCLDVCINYVKSPKF Sbjct 2138 VFNNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVVKLCLDVCINYVKSPKF 2197 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTIVMWLLLLSICLGSLTYVTA LGVCLSSLGVPSYCDGVRELY NSSNVTTMDFCQ Sbjct 2198 SKLFTIVMWLLLLSICLGSLTYVTAALGVCLSSLGVPSYCDGVRELYTNSSNVTTMDFCQ 2257 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTF GLAAEWLLAYMLFTKFFYLLGL Sbjct 2258 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFFGLAAEWLLAYMLFTKFFYLLGL 2317 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG Sbjct 2318 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 2377 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST Sbjct 2378 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 2437 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2438 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 2497 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2498 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2557 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2558 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2617 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDI+VTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2618 TDVDTKDVIECLKLSHHSDIDVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2677 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2678 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2737 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47469.1 Length: 7069 Range 1: 819 to 2737 Score:3885 bits(10075), Expect:0.0, Method:Compositional matrix adjust., Identities:1878/1920(98%), Positives:1893/1920(98%), Gaps:5/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEEE TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEEILEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSA+PTVIVNAAN HLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSARPTVIVNAANIHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESDEYIRQNGPL VGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQIESDEYIRQNGPLIVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 K+EEPKLEEPK VQPVAE+PVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 -KKEEPKLEEPKEVQPVAERPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1237 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV+E Sbjct 1238 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVSE 1297 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1298 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1357 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYG RFFFYTSKEPVASIITKLNSLNEP Sbjct 1358 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGSRFFFYTSKEPVASIITKLNSLNEP 1417 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1418 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1477 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1478 ISLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 1537 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1538 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1597 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1598 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1657 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1658 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1717 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQK TTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1718 AKRVLNVVCKHCGQKITTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1777 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1778 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1837 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQPMPNA Sbjct 1838 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPMPNA 1897 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1898 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1957 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPN WCLRCLWSTKP+DTSN+FEVL VEDTQGMDNLACES Sbjct 1958 KLLHKPILWHINQTTNKTTYKPNTWCLRCLWSTKPLDTSNTFEVLAVEDTQGMDNLACES 2017 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKP+EEGVK+T ELGHEDLMAAYVEET Sbjct 2018 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPAEEGVKITPELGHEDLMAAYVEET 2077 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHG AAINSVPWSKILAYVKPFLGQ AVITSNCIKKCVQR Sbjct 2078 SITIKKPNELSLALGLKTLATHGTAAINSVPWSKILAYVKPFLGQAAVITSNCIKKCVQR 2137 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2138 VFNNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2197 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTIVMWLLLLSICLGSLTYV A LGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ Sbjct 2198 SKLFTIVMWLLLLSICLGSLTYVIAALGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 2257 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL Sbjct 2258 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 2317 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG Sbjct 2318 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 2377 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST Sbjct 2378 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 2437 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2438 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 2497 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2498 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2557 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2558 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2617 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDI+VTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2618 TDVDTKDVIECLKLSHHSDIDVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2677 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2678 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2737 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47464.1 Length: 7070 Range 1: 819 to 2737 Score:3885 bits(10074), Expect:0.0, Method:Compositional matrix adjust., Identities:1875/1920(98%), Positives:1894/1920(98%), Gaps:5/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEEE TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEEISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQF+GYLKLTDNVAIKCIDIVKEAQSA+PTVIVNAAN HLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFIGYLKLTDNVAIKCIDIVKEAQSARPTVIVNAANIHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESDEYIRQNGPL VGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQIESDEYIRQNGPLIVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 K+EEPKLEEPK VQPVAE+P+DVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 -KKEEPKLEEPKEVQPVAERPIDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1237 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV+E Sbjct 1238 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVSE 1297 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1298 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1357 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGI+DYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1358 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIMDYGVRFFFYTSKEPVASIITKLNSLNEP 1417 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1418 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1477 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1478 ISLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 1537 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1538 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1597 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1598 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1657 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETM HLLQHANLES Sbjct 1658 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMIHLLQHANLES 1717 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCK+CGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1718 AKRVLNVVCKYCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1777 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1778 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1837 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQPMPNA Sbjct 1838 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPMPNA 1897 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1898 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1957 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPN WCLRCLWSTKP+DTSN+FEVL VEDTQGMDNLACES Sbjct 1958 KLLHKPILWHINQTTNKTTYKPNTWCLRCLWSTKPLDTSNTFEVLAVEDTQGMDNLACES 2017 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKP+EEGVK+T ELGHEDLMAAYVEET Sbjct 2018 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPAEEGVKITPELGHEDLMAAYVEET 2077 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHG AAINSVPWSKILAYVKPFLGQ AVITSNCIKKCVQR Sbjct 2078 SITIKKPNELSLALGLKTLATHGTAAINSVPWSKILAYVKPFLGQAAVITSNCIKKCVQR 2137 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2138 VFNNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2197 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTIVMWLLLLSICLGSLTYV A LGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ Sbjct 2198 SKLFTIVMWLLLLSICLGSLTYVIAALGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 2257 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL Sbjct 2258 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 2317 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG Sbjct 2318 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 2377 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST Sbjct 2378 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 2437 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2438 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 2497 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2498 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2557 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2558 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2617 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDI+VTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2618 TDVDTKDVIECLKLSHHSDIDVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2677 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2678 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2737 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47329.1 Length: 7070 Range 1: 819 to 2737 Score:3881 bits(10065), Expect:0.0, Method:Compositional matrix adjust., Identities:1875/1920(98%), Positives:1890/1920(98%), Gaps:5/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEEE TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEEISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTV+VNAAN HLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVLVNAANIHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGED QLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDAQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKP+VESP Sbjct 1119 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPQVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 K+EEPKLEEPK QPVAE+PVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 -KKEEPKLEEPKEAQPVAERPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1237 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPVAE Sbjct 1238 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVAE 1297 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1298 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1357 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1358 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1417 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1418 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1477 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1478 ISLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 1537 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1538 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1597 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1598 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1657 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1658 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1717 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1718 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1777 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHIT+KETLYR+DGAHLTKMSEYKG V Sbjct 1778 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITSKETLYRIDGAHLTKMSEYKGSV 1837 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQPMPNA Sbjct 1838 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPMPNA 1897 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSN KFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1898 SFDNFKLTCSNIKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1957 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPN WCLRCLWSTKPVDTSN FEVLVVEDTQGMDNLACES Sbjct 1958 KLLHKPILWHINQTTNKTTYKPNTWCLRCLWSTKPVDTSNIFEVLVVEDTQGMDNLACES 2017 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKE+IECDVKTTEVVGNVILKPSE GVKVT EL HEDLMAAYVEET Sbjct 2018 QTTTSEEVVENPTVQKEVIECDVKTTEVVGNVILKPSEAGVKVTSELCHEDLMAAYVEET 2077 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQ AVITSNCIKKCVQR Sbjct 2078 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQAAVITSNCIKKCVQR 2137 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2138 VFNNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2197 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFT+VMWLLLLSICLGSL YVTA LGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ Sbjct 2198 SKLFTVVMWLLLLSICLGSLIYVTAALGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 2257 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL Sbjct 2258 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 2317 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG Sbjct 2318 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 2377 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2378 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKVHNWNCLNCDTFCAGST 2437 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2438 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 2497 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAA+SASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2498 LDNLRANNTKGSLPINVIVFDGKSKCEESAARSASVYYSQLMCQPILLLDQALVSDVGDS 2557 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLK LVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2558 TEVSVKMFDAYVDTFSATFSVPMEKLKTLVATAHSELAKGVALDGVLSTFVSAARQGVVD 2617 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2618 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2677 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2678 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2737 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47314.1 Length: 7070 Range 1: 819 to 2737 Score:3878 bits(10056), Expect:0.0, Method:Compositional matrix adjust., Identities:1873/1920(98%), Positives:1891/1920(98%), Gaps:5/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEE LSSRMYCSFYPPDEEEDC+ECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEENLSSRMYCSFYPPDEEEDCDECE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE ETCEHEYGTEDDYKGLPLEFGASTETP VEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEQISEETCEHEYGTEDDYKGLPLEFGASTETPRVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKC+DIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCVDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ+ESDEYI+QNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQSESDEYIKQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 K+EEPKLEEPK VQPVAE+PVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 -KKEEPKLEEPKEVQPVAERPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1237 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGED+SFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPVAE Sbjct 1238 QDSQNMLRGEDISFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVAE 1297 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1298 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1357 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1358 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1417 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+F+ET Sbjct 1418 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFLET 1477 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT GSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1478 ISLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTMGSPIEFHLDGEVLPLDKLKSLLSLR 1537 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1538 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1597 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLR+EAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1598 DDTLRNEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1657 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1658 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1717 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1718 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1777 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1778 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1837 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQPMPNA Sbjct 1838 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPMPNA 1897 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSN KFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1898 SFDNFKLTCSNIKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1957 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPN WCLRCLWSTKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1958 KLLHKPILWHINQTTNKTTYKPNTWCLRCLWSTKPVDTSNTFEVLAVEDTQGMDNLACES 2017 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKP+EEGVK+T ELGHEDLMAAYVEET Sbjct 2018 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPAEEGVKITPELGHEDLMAAYVEET 2077 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHG AAINSVPWSKILAYVKPFLGQ AV TSNCIKKCVQR Sbjct 2078 SITIKKPNELSLALGLKTLATHGTAAINSVPWSKILAYVKPFLGQAAVTTSNCIKKCVQR 2137 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDV INYVKSPKF Sbjct 2138 VFNNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVSINYVKSPKF 2197 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTIVMWLLLLSICLGSLTYVTA LGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ Sbjct 2198 SKLFTIVMWLLLLSICLGSLTYVTAALGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 2257 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL Sbjct 2258 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 2317 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG Sbjct 2318 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 2377 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST Sbjct 2378 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 2437 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2438 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 2497 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2498 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2557 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLK LVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2558 TEVSVKMFDAYVDTFSATFSVPMEKLKTLVATAHSELAKGVALDGVLSTFVSAARQGVVD 2617 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2618 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2677 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIR AAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2678 AKSHNVSLVWNVKDYMSLSEQLRKQIRGAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2737 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47324.1 Length: 7070 Range 1: 819 to 2737 Score:3872 bits(10041), Expect:0.0, Method:Compositional matrix adjust., Identities:1873/1920(98%), Positives:1886/1920(98%), Gaps:5/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATF LFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFNLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEEE TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEEISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAAN HLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANIHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGED QLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDAQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 K+EEPKLEEPK VQPVAE+PVD KPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 -KKEEPKLEEPKEVQPVAERPVDAKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1237 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPVAE Sbjct 1238 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVAE 1297 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPN+KEEVLGTVSWNLREMLAHAEE Sbjct 1298 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNQKEEVLGTVSWNLREMLAHAEE 1357 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1358 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1417 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1418 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1477 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGD IVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1478 ISLAGSYRDWSYSGQRTELGVEFLKRGDTIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 1537 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1538 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1597 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1598 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1657 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1658 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1717 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1718 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1777 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKG V Sbjct 1778 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGSV 1837 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGV YTEIEPKLDGYYKK NAYYTEQPIDLVPTQPMPNA Sbjct 1838 TDVFYKETSYTTTIKPVSYKLDGVIYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPMPNA 1897 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1898 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1957 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPN WCLRCLWSTKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1958 KLLHKPILWHINQTTNKTTYKPNTWCLRCLWSTKPVDTSNTFEVLAVEDTQGMDNLACES 2017 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKE+IECDVKTTEVVGNVILKPSE GVKVT EL HEDLMAAYVEET Sbjct 2018 QTTTSEEVVENPTVQKEVIECDVKTTEVVGNVILKPSEAGVKVTSELCHEDLMAAYVEET 2077 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQ AVITSNCIKKCVQR Sbjct 2078 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQAAVITSNCIKKCVQR 2137 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDV INYVKSPKF Sbjct 2138 VFNNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVSINYVKSPKF 2197 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFT+VMWLLLLSICLGSL YVTA LGVCLSSLGVPSYCDGVRELYINSSNVTTMD CQ Sbjct 2198 SKLFTVVMWLLLLSICLGSLIYVTAALGVCLSSLGVPSYCDGVRELYINSSNVTTMDLCQ 2257 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL Sbjct 2258 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 2317 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG Sbjct 2318 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 2377 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2378 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKVHNWNCLNCDTFCAGST 2437 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2438 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 2497 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAA+SASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2498 LDNLRANNTKGSLPINVIVFDGKSKCEESAARSASVYYSQLMCQPILLLDQALVSDVGDS 2557 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLK LVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2558 TEVSVKMFDAYVDTFSATFSVPMEKLKTLVATAHSELAKGVALDGVLSTFVSAARQGVVD 2617 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2618 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2677 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2678 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2737 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47499.1 Length: 7070 Range 1: 819 to 2737 Score:3868 bits(10030), Expect:0.0, Method:Compositional matrix adjust., Identities:1868/1920(97%), Positives:1887/1920(98%), Gaps:5/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVK VTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKCVTFGEDTVLEVQGYKNVKITFELDDRVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEEE TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEEISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSA+PTVIVNAAN HLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSARPTVIVNAANIHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESD YIRQNG L VGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQIESDAYIRQNGHLIVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 K+EEPKLEEPK VQP+AEKPV VKPKI+ACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 -KKEEPKLEEPKEVQPIAEKPVGVKPKIRACIDEVTTTLEETKFLTNKLLLFADINGKLY 1237 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPVAE Sbjct 1238 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVAE 1297 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNE+EEVLGTVSWNLREMLAHAEE Sbjct 1298 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEREEVLGTVSWNLREMLAHAEE 1357 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1358 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1417 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1418 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1477 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1478 ISLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 1537 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1538 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1597 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1598 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1657 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1658 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1717 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTL+GVEAVMYMGTLSYDELKTGVS+PCVCGRNATQYLVQQESS Sbjct 1718 AKRVLNVVCKHCGQKTTTLRGVEAVMYMGTLSYDELKTGVSVPCVCGRNATQYLVQQESS 1777 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1778 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1837 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1838 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1897 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1898 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1957 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPN WCLRCLWSTKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1958 KLLHKPILWHINQTTNKTTYKPNTWCLRCLWSTKPVDTSNTFEVLAVEDTQGMDNLACES 2017 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKP+EEGVK+T ELGHEDLMAAYVEET Sbjct 2018 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPAEEGVKITPELGHEDLMAAYVEET 2077 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHG AAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR Sbjct 2078 SITIKKPNELSLALGLKTLATHGTAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 2137 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLL QLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2138 VFNNYMPYVITLLLQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2197 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTIVMWLLLLSICLGSLTYVTA LGVCLSSLGVPSYCDGVRELY NSSNVTTMDFCQ Sbjct 2198 SKLFTIVMWLLLLSICLGSLTYVTAALGVCLSSLGVPSYCDGVRELYTNSSNVTTMDFCQ 2257 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL Sbjct 2258 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 2317 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG Sbjct 2318 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 2377 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST Sbjct 2378 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 2437 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYF KAGQKTYERHPLSHFVN Sbjct 2438 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFGKAGQKTYERHPLSHFVN 2497 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2498 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2557 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPM+K K LVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2558 TEVSVKMFDAYVDTFSATFSVPMDKFKTLVATAHSELAKGVALDGVLSTFVSAARQGVVD 2617 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHH+DIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2618 TDVDTKDVIECLKLSHHTDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2677 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSE LRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2678 AKSHNVSLVWNVKDYMSLSEHLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2737 >ORF1a polyprotein [Severe acute respiratory syndrome-related coronavirus] Sequence ID: WEG19461.1 Length: 4380 Range 1: 819 to 2738 Score:3866 bits(10026), Expect:0.0, Method:Compositional matrix adjust., Identities:1858/1920(97%), Positives:1884/1920(98%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 D+EE TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLD A EAEPEPEPLP Sbjct 939 DDEEISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDGATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKC+DIVKEAQSAKPTVIVNAAN HLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCVDIVKEAQSAKPTVIVNAANIHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ+ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLK AYENFNSQ Sbjct 1059 AMQSESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKMAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 VLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 GVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 NK EEPKLEEPK VQPV EKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 NKREEPKLEEPKEVQPVVEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDV+TSGDITCVIIPAKK+GGTTEMLARALK+VPVAE Sbjct 1239 QDSQNMLRGEDMSFLEKDAPYIVGDVVTSGDITCVIIPAKKAGGTTEMLARALKKVPVAE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIM TIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLN+LN+P Sbjct 1359 TRKLMPICLDVRAIMTTIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNALNQP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTT SP+EFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTESPVEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCK+CGQKTTTL+GVEAVMYMGTLSYD+LKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKYCGQKTTTLEGVEAVMYMGTLSYDQLKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTC NTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCPNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1959 KLLHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNTFEVLEVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QT TSEEVVENPTVQKE+IECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVE T Sbjct 2019 QTPTSEEVVENPTVQKEVIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVENT 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHGAAAINSV WSKILAYVKPFLGQ V TSNC+KKCVQR Sbjct 2079 SITIKKPNELSLALGLKTLATHGAAAINSVSWSKILAYVKPFLGQATVTTSNCMKKCVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2139 VFNNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFT+VMWLLLLS CLGSL YV A GVCLSSLGVPSYCDGVR+LYINSSNVTTMDFC+ Sbjct 2199 SKLFTVVMWLLLLSTCLGSLIYVIAAFGVCLSSLGVPSYCDGVRDLYINSSNVTTMDFCE 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G PCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL Sbjct 2259 GSLPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAP+SAMVRMYIFFASFYYVWKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPISAMVRMYIFFASFYYVWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKVHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1a polyprotein [Severe acute respiratory syndrome-related coronavirus] Sequence ID: WEG19471.1 Length: 4380 Range 1: 819 to 2738 Score:3865 bits(10024), Expect:0.0, Method:Compositional matrix adjust., Identities:1858/1920(97%), Positives:1885/1920(98%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 D+EE TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLD A EAEPEPEPLP Sbjct 939 DDEEISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDGATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKC+DIVKEAQSAKPTVIVNAAN HLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCVDIVKEAQSAKPTVIVNAANIHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ+ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLK AYENFNSQ Sbjct 1059 AMQSESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKMAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 VLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 GVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 NK EEPKLEEPK VQPV EKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 NKREEPKLEEPKEVQPVVEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDV+TSGDITCVIIPAKK+GGTTEMLARALK+VPVAE Sbjct 1239 QDSQNMLRGEDMSFLEKDAPYIVGDVVTSGDITCVIIPAKKAGGTTEMLARALKKVPVAE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIM TIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLN+LN+P Sbjct 1359 TRKLMPICLDVRAIMTTIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNALNQP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTT SP+EFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTESPVEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCK+CGQKTTTL+GVEAVMYMGTLSYD+LKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKYCGQKTTTLEGVEAVMYMGTLSYDQLKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTC NTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCPNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1959 KLLHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNTFEVLEVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QT TSEEVVENPTVQKE+IECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVE T Sbjct 2019 QTPTSEEVVENPTVQKEVIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVENT 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQ V TSNC+KKCVQR Sbjct 2079 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQATVTTSNCMKKCVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2139 VFNNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFT+VMWLLLLS CLGSL YV A GVCLSSLGVPSYCDGVR+LYINSSNVTTMDFC+ Sbjct 2199 SKLFTVVMWLLLLSTCLGSLIYVIAAFGVCLSSLGVPSYCDGVRDLYINSSNVTTMDFCE 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G PCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL Sbjct 2259 GSLPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAP+SAMVRMYIFFASFYYVWKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPISAMVRMYIFFASFYYVWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKVHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVY+SQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYHSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47459.1 Length: 7070 Range 1: 819 to 2737 Score:3864 bits(10020), Expect:0.0, Method:Compositional matrix adjust., Identities:1865/1920(97%), Positives:1888/1920(98%), Gaps:5/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEEE TCEHEYGTEDDYKGLPLEFGASTET HV++EEEEEDWLD+A EAEPEPEPLP Sbjct 939 DEEEIAEETCEHEYGTEDDYKGLPLEFGASTETSHVDDEEEEEDWLDNATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAAN HLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANIHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLK KVES Sbjct 1119 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKSKVES- 1177 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +K+EEPKLEEPK VQPV E+ VDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1178 SKKEEPKLEEPKEVQPVVERHVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1237 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDV+TSGDITCVIIPAKK+GGTTEMLARALK+VP AE Sbjct 1238 QDSQNMLRGEDMSFLEKDAPYIVGDVVTSGDITCVIIPAKKAGGTTEMLARALKKVPAAE 1297 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1298 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1357 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLN+LN+P Sbjct 1358 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNALNQP 1417 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1418 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1477 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSP+EFHLDGEVLPLDKLKSLLSLR Sbjct 1478 ISLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPVEFHLDGEVLPLDKLKSLLSLR 1537 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1538 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1597 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1598 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1657 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQ EVKFNAPALQEAYYRARAGDAAN CALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1658 QQSEVKFNAPALQEAYYRARAGDAANLCALILAYSNKTVGELGDVRETMTHLLQHANLES 1717 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1718 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1777 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGPV Sbjct 1778 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV 1837 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1838 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1897 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTC NTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1898 SFDNFKLTCFNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1957 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPN WCLRCLWSTKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1958 KLLHKPILWHINQTTNKTTYKPNTWCLRCLWSTKPVDTSNTFEVLAVEDTQGMDNLACES 2017 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKP+E+GVK+T ELGHEDLMAAYVEET Sbjct 2018 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPAEKGVKITPELGHEDLMAAYVEET 2077 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHG AAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR Sbjct 2078 SITIKKPNELSLALGLKTLATHGTAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 2137 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2138 VFNNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2197 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTIVMWLLLLSICLGSLTYVTA LGVCLSSLGVPSYCDGVRELY NSSNVTTMDFCQ Sbjct 2198 SKLFTIVMWLLLLSICLGSLTYVTAALGVCLSSLGVPSYCDGVRELYTNSSNVTTMDFCQ 2257 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFL LAAEWLLAYMLFTKFFYLLGL Sbjct 2258 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLSLAAEWLLAYMLFTKFFYLLGL 2317 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAP+SAMVRMYIFFASFYYVWKSYVHIMDG Sbjct 2318 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPISAMVRMYIFFASFYYVWKSYVHIMDG 2377 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST Sbjct 2378 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 2437 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2438 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 2497 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2498 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2557 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2558 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2617 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2618 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2677 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNI FRLTCATTRQVVNVITTKISLKGG Sbjct 2678 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNISFRLTCATTRQVVNVITTKISLKGG 2737 >MAG: ORF1a protein [Severe acute respiratory syndrome-related coronavirus] Sequence ID: WCZ55791.1 Length: 4380 Range 1: 819 to 2738 Score:3863 bits(10019), Expect:0.0, Method:Compositional matrix adjust., Identities:1856/1920(97%), Positives:1883/1920(98%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDT+LEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTILEVQGYKNVKITFELDDRVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDC+ECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCDECE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEQISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +KEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFAD+NGKLY Sbjct 1179 DKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADVNGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGED SFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV E Sbjct 1239 QDSQNMLRGEDTSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVDE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1359 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQ TELGVEFLKRGDKIVYHT GSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGSYRDWSYSGQHTELGVEFLKRGDKIVYHTAGSPIEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKF+APALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFSAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPN WCLRCLW+TKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1959 KLLHKPILWHINQTTNKTTYKPNTWCLRCLWTTKPVDTSNTFEVLAVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET Sbjct 2019 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHG +AINSVPWSKILAYVKPFLGQ V TSNCIKKCVQR Sbjct 2079 SITIKKPNELSLALGLKTLATHGVSAINSVPWSKILAYVKPFLGQAVVTTSNCIKKCVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPY ITLLFQLCTFTKSTNS+I+ASLPTTIAKNSVK VA+LCLD INYVKSPKF Sbjct 2139 VFNNYMPYFITLLFQLCTFTKSTNSKIRASLPTTIAKNSVKGVARLCLDAGINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSLTYVTA LGV LS+ GVPSYC GVRELY+NSSNVTTMDFC+ Sbjct 2199 SKLFTIAMWLLLLSICLGSLTYVTAALGVFLSNFGVPSYCSGVRELYLNSSNVTTMDFCE 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLGL Sbjct 2259 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMW IISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWLIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQF+RPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFRRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGS+PINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSIPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47279.1 Length: 7071 Range 1: 819 to 2738 Score:3860 bits(10011), Expect:0.0, Method:Compositional matrix adjust., Identities:1858/1920(97%), Positives:1884/1920(98%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 D+EE TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLD A EAEPEPEPLP Sbjct 939 DDEEISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDGATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKC+DIVKEAQSAKPTVIVNAAN HLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCVDIVKEAQSAKPTVIVNAANIHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ+ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLK AYENFNSQ Sbjct 1059 AMQSESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKMAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 VLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 GVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 NK EEPKLEEPK VQPV EKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 NKREEPKLEEPKEVQPVVEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDV+TSGDITCVIIPAKK+GGTTEMLARALK+VPVAE Sbjct 1239 QDSQNMLRGEDMSFLEKDAPYIVGDVVTSGDITCVIIPAKKAGGTTEMLARALKKVPVAE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIM TIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLN+LN+P Sbjct 1359 TRKLMPICLDVRAIMTTIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNALNQP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTT SP+EFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTESPVEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCK+CGQKTTTLKGVEAVMYMGTLSYD+LKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKYCGQKTTTLKGVEAVMYMGTLSYDQLKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTC NTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCPNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSN+FEVL +EDTQGMDNLACES Sbjct 1959 KLLHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNTFEVLEIEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QT TSEEVVENPTVQKE+IECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVE T Sbjct 2019 QTPTSEEVVENPTVQKEVIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVENT 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQ V TSNC+KKCVQR Sbjct 2079 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQATVTTSNCMKKCVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2139 VFNNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFT+VMWLLLLS CLGSL YV A GVCLSSLGVPSYCDGVR+LY NSSNVTTMDFC+ Sbjct 2199 SKLFTVVMWLLLLSTCLGSLIYVIAAFGVCLSSLGVPSYCDGVRDLYTNSSNVTTMDFCE 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G PCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL Sbjct 2259 GSLPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAP+SAMVRMYIFFASFYYVWKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPISAMVRMYIFFASFYYVWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKVHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1ab polyprotein [Severe acute respiratory syndrome-related coronavirus] Sequence ID: WEG19470.1 Length: 7071 Range 1: 819 to 2738 Score:3860 bits(10009), Expect:0.0, Method:Compositional matrix adjust., Identities:1858/1920(97%), Positives:1885/1920(98%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 D+EE TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLD A EAEPEPEPLP Sbjct 939 DDEEISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDGATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKC+DIVKEAQSAKPTVIVNAAN HLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCVDIVKEAQSAKPTVIVNAANIHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ+ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLK AYENFNSQ Sbjct 1059 AMQSESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKMAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 VLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 GVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 NK EEPKLEEPK VQPV EKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 NKREEPKLEEPKEVQPVVEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDV+TSGDITCVIIPAKK+GGTTEMLARALK+VPVAE Sbjct 1239 QDSQNMLRGEDMSFLEKDAPYIVGDVVTSGDITCVIIPAKKAGGTTEMLARALKKVPVAE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIM TIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLN+LN+P Sbjct 1359 TRKLMPICLDVRAIMTTIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNALNQP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTT SP+EFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTESPVEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCK+CGQKTTTL+GVEAVMYMGTLSYD+LKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKYCGQKTTTLEGVEAVMYMGTLSYDQLKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTC NTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCPNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1959 KLLHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNTFEVLEVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QT TSEEVVENPTVQKE+IECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVE T Sbjct 2019 QTPTSEEVVENPTVQKEVIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVENT 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQ V TSNC+KKCVQR Sbjct 2079 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQATVTTSNCMKKCVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2139 VFNNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFT+VMWLLLLS CLGSL YV A GVCLSSLGVPSYCDGVR+LYINSSNVTTMDFC+ Sbjct 2199 SKLFTVVMWLLLLSTCLGSLIYVIAAFGVCLSSLGVPSYCDGVRDLYINSSNVTTMDFCE 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G PCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL Sbjct 2259 GSLPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAP+SAMVRMYIFFASFYYVWKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPISAMVRMYIFFASFYYVWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKVHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVY+SQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYHSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1ab polyprotein [Severe acute respiratory syndrome-related coronavirus] Sequence ID: WEG19460.1 Length: 7071 Range 1: 819 to 2738 Score:3858 bits(10005), Expect:0.0, Method:Compositional matrix adjust., Identities:1858/1920(97%), Positives:1884/1920(98%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 D+EE TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLD A EAEPEPEPLP Sbjct 939 DDEEISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDGATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKC+DIVKEAQSAKPTVIVNAAN HLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCVDIVKEAQSAKPTVIVNAANIHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ+ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLK AYENFNSQ Sbjct 1059 AMQSESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKMAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 VLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 GVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 NK EEPKLEEPK VQPV EKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 NKREEPKLEEPKEVQPVVEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDV+TSGDITCVIIPAKK+GGTTEMLARALK+VPVAE Sbjct 1239 QDSQNMLRGEDMSFLEKDAPYIVGDVVTSGDITCVIIPAKKAGGTTEMLARALKKVPVAE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIM TIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLN+LN+P Sbjct 1359 TRKLMPICLDVRAIMTTIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNALNQP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTT SP+EFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTESPVEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCK+CGQKTTTL+GVEAVMYMGTLSYD+LKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKYCGQKTTTLEGVEAVMYMGTLSYDQLKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTC NTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCPNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1959 KLLHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNTFEVLEVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QT TSEEVVENPTVQKE+IECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVE T Sbjct 2019 QTPTSEEVVENPTVQKEVIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVENT 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHGAAAINSV WSKILAYVKPFLGQ V TSNC+KKCVQR Sbjct 2079 SITIKKPNELSLALGLKTLATHGAAAINSVSWSKILAYVKPFLGQATVTTSNCMKKCVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2139 VFNNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFT+VMWLLLLS CLGSL YV A GVCLSSLGVPSYCDGVR+LYINSSNVTTMDFC+ Sbjct 2199 SKLFTVVMWLLLLSTCLGSLIYVIAAFGVCLSSLGVPSYCDGVRDLYINSSNVTTMDFCE 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G PCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL Sbjct 2259 GSLPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAP+SAMVRMYIFFASFYYVWKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPISAMVRMYIFFASFYYVWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKVHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47454.1 Length: 7067 Range 1: 819 to 2734 Score:3858 bits(10005), Expect:0.0, Method:Compositional matrix adjust., Identities:1862/1917(97%), Positives:1883/1917(98%), Gaps:2/1917(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEE-ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPEEP 179 D+E ETCEHEYGTEDDYKGLPLEFGAS E HVEEEE EEDWLDDA EAEPEPEPLPEEP Sbjct 939 DDEGETCEHEYGTEDDYKGLPLEFGASIEIQHVEEEEAEEDWLDDATEAEPEPEPLPEEP 998 Query 180 VNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGAMQ 239 VNQFVGYLKLTDNVAIKC+DIVKEAQSAKPTVIVNAAN HLKHGGGVAGALNKATNGAMQ Sbjct 999 VNQFVGYLKLTDNVAIKCVDIVKEAQSAKPTVIVNAANIHLKHGGGVAGALNKATNGAMQ 1058 Query 240 NESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVL 299 NESDEYI+QNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVL Sbjct 1059 NESDEYIKQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQDVL 1118 Query 300 LAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPNKE 359 LAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLK KVESP K+ Sbjct 1119 LAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKSKVESP-KK 1177 Query 360 EEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDS 419 EEPKLEEPK VQPV E+PVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDS Sbjct 1178 EEPKLEEPKEVQPVVERPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQDS 1237 Query 420 QNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEYIT 479 QNMLRGEDMSFLEKDAPYIVGDV+TSGDITCVIIPAKKSGGTTEMLARALK+VPVAEYIT Sbjct 1238 QNMLRGEDMSFLEKDAPYIVGDVVTSGDITCVIIPAKKSGGTTEMLARALKKVPVAEYIT 1297 Query 480 TYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRK 539 TYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRK Sbjct 1298 TYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEETRK 1357 Query 540 LMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVT 599 LMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLN+LN+PLVT Sbjct 1358 LMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNALNQPLVT 1417 Query 600 MPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETTSL 659 MPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET SL Sbjct 1418 MPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVETISL 1477 Query 660 AGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLREVK 719 AGSYRDWSYSGQRTELGVEFLKRGDKIVYHTT SP+EFHLDGEVLP DKLKSLLSLREVK Sbjct 1478 AGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTESPVEFHLDGEVLPFDKLKSLLSLREVK 1537 Query 720 TIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDT 779 TIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDT Sbjct 1538 TIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDT 1597 Query 780 LRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQV 839 LRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQV Sbjct 1598 LRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQQV 1657 Query 840 EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKR 899 EVKFNAPALQEAYYRARAGDAAN CALILAYSNKTVGELGDVRETMTHLLQHANLESAKR Sbjct 1658 EVKFNAPALQEAYYRARAGDAANLCALILAYSNKTVGELGDVRETMTHLLQHANLESAKR 1717 Query 900 VLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSFVM 959 VLNVVCK+CGQKTTTLKGVEAVMYMGTLSYDELKTGV IPCVCGRNATQYLVQQESSFVM Sbjct 1718 VLNVVCKYCGQKTTTLKGVEAVMYMGTLSYDELKTGVPIPCVCGRNATQYLVQQESSFVM 1777 Query 960 MSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVTDV 1019 MSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGPVTDV Sbjct 1778 MSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVTDV 1837 Query 1020 FYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNASFD 1079 FYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNASFD Sbjct 1838 FYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNASFD 1897 Query 1080 NFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAKLV 1139 NFKLTCSN KFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGAKL+ Sbjct 1898 NFKLTCSNIKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGAKLL 1957 Query 1140 HKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQTT 1199 HKPILWHINQTTNKTTYKPN WCLRCLWSTKPVDTSN+FEVL VEDTQGMDNLACESQT Sbjct 1958 HKPILWHINQTTNKTTYKPNTWCLRCLWSTKPVDTSNTFEVLEVEDTQGMDNLACESQTP 2017 Query 1200 TSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETSIT 1259 TSEEVVENPTVQKE+IECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVE TSIT Sbjct 2018 TSEEVVENPTVQKEVIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVENTSIT 2077 Query 1260 IKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRVFS 1319 IKKPNELSLALGLKTLATHGAAAINSVPWS+ILAYVKPFLGQ V TSNCIKKCVQRVF+ Sbjct 2078 IKKPNELSLALGLKTLATHGAAAINSVPWSEILAYVKPFLGQATVTTSNCIKKCVQRVFN 2137 Query 1320 NYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKL 1379 NYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKL Sbjct 2138 NYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFSKL 2197 Query 1380 FTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQGYF 1439 FTIVMWLLLLSICLGSLTYVTA GVCLSSLGVPSYCDGVRELY NSSNVTTMDFCQG F Sbjct 2198 FTIVMWLLLLSICLGSLTYVTAAFGVCLSSLGVPSYCDGVRELYTNSSNVTTMDFCQGSF 2257 Query 1440 PCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAI 1499 PCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAI Sbjct 2258 PCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLSAI 2317 Query 1500 MQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTS 1559 MQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTS Sbjct 2318 MQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGCTS 2377 Query 1560 STCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFIS 1619 STCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFIS Sbjct 2378 STCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTFIS 2437 Query 1620 DEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDN 1679 DEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDN Sbjct 2438 DEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNLDN 2497 Query 1680 LRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEV 1739 LRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEV Sbjct 2498 LRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDSTEV 2557 Query 1740 SVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDV 1799 SVKMFDAYVDTFSATFSVPMEKLKALVATAH+ELAKGVALDGVLSTFVSAARQGVVDTDV Sbjct 2558 SVKMFDAYVDTFSATFSVPMEKLKALVATAHNELAKGVALDGVLSTFVSAARQGVVDTDV 2617 Query 1800 DTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKS 1859 DTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKS Sbjct 2618 DTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKS 2677 Query 1860 HNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 HNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2678 HNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2734 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47374.1 Length: 7071 Range 1: 819 to 2738 Score:3855 bits(9997), Expect:0.0, Method:Compositional matrix adjust., Identities:1855/1920(97%), Positives:1883/1920(98%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDT+LEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTILEVQGYKNVKITFELDDRVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDC+ECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCDECE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEQISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 VLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 GVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +K+EEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFAD+NGKLY Sbjct 1179 DKKEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADVNGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGED SFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV E Sbjct 1239 QDSQNMLRGEDTSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVDE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1359 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQ TELGVEFLKRGDKIVYHT GSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGSYRDWSYSGQHTELGVEFLKRGDKIVYHTAGSPIEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPN WCLRCLW+TKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1959 KLLHKPILWHINQTTNKTTYKPNTWCLRCLWTTKPVDTSNTFEVLAVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET Sbjct 2019 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHG +AINSVPWSKILAYVKPFLGQ V TSNCIKKCVQR Sbjct 2079 SITIKKPNELSLALGLKTLATHGVSAINSVPWSKILAYVKPFLGQAVVTTSNCIKKCVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNS+I+ASLPTTIAKNSVK VA+LCLD INYVKSPKF Sbjct 2139 VFNNYMPYVITLLFQLCTFTKSTNSKIRASLPTTIAKNSVKGVARLCLDAGINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSLTYVTA LGV LS+ GVPSYC GVRELY+NSSNVTTMDFC+ Sbjct 2199 SKLFTIAMWLLLLSICLGSLTYVTAALGVFLSNFGVPSYCSGVRELYLNSSNVTTMDFCE 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLGL Sbjct 2259 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMW IISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWLIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFC+ HNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCRTHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQF+RPINPTDQS+YV+DSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFRRPINPTDQSSYVIDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47349.1 Length: 7071 Range 1: 819 to 2738 Score:3855 bits(9997), Expect:0.0, Method:Compositional matrix adjust., Identities:1855/1920(97%), Positives:1883/1920(98%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDT+LEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTILEVQGYKNVKITFELDDRVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDC+ECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCDECE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEQISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 VLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 GVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +K+EEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFAD+NGKLY Sbjct 1179 DKKEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADVNGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGED SFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV E Sbjct 1239 QDSQNMLRGEDTSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVDE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1359 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQ TELGVEFLKRGDKIVYHT GSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGSYRDWSYSGQHTELGVEFLKRGDKIVYHTAGSPIEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPN WCLRCLW+TKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1959 KLLHKPILWHINQTTNKTTYKPNTWCLRCLWTTKPVDTSNTFEVLAVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET Sbjct 2019 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHG +AINSVPWSKILAYVKPFLGQ V TSNCIKKCVQR Sbjct 2079 SITIKKPNELSLALGLKTLATHGVSAINSVPWSKILAYVKPFLGQAVVTTSNCIKKCVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNS+I+ASLPTTIAKNSVK VA+LCLD INYVKSPKF Sbjct 2139 VFNNYMPYVITLLFQLCTFTKSTNSKIRASLPTTIAKNSVKGVARLCLDAGINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSLTYVTA LGV LS+ GVPSYC GVRELY+NSSNVTTMDFC+ Sbjct 2199 SKLFTIAMWLLLLSICLGSLTYVTAALGVFLSNFGVPSYCSGVRELYLNSSNVTTMDFCE 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLGL Sbjct 2259 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMW IISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWLIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFC+ HNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCRTHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQF+RPINPTDQS+YV+DSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFRRPINPTDQSSYVIDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47354.1 Length: 7071 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47359.1 Length: 7071 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47364.1 Length: 7071 Range 1: 819 to 2738 Score:3855 bits(9997), Expect:0.0, Method:Compositional matrix adjust., Identities:1855/1920(97%), Positives:1883/1920(98%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDT+LEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTILEVQGYKNVKITFELDDRVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDC+ECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCDECE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEQISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 VLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 GVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +K+EEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFAD+NGKLY Sbjct 1179 DKKEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADVNGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGED SFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV E Sbjct 1239 QDSQNMLRGEDTSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVDE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1359 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQ TELGVEFLKRGDKIVYHT GSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGSYRDWSYSGQHTELGVEFLKRGDKIVYHTAGSPIEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPN WCLRCLW+TKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1959 KLLHKPILWHINQTTNKTTYKPNTWCLRCLWTTKPVDTSNTFEVLAVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET Sbjct 2019 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHG +AINSVPWSKILAYVKPFLGQ V TSNCIKKCVQR Sbjct 2079 SITIKKPNELSLALGLKTLATHGVSAINSVPWSKILAYVKPFLGQAVVTTSNCIKKCVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNS+I+ASLPTTIAKNSVK VA+LCLD INYVKSPKF Sbjct 2139 VFNNYMPYVITLLFQLCTFTKSTNSKIRASLPTTIAKNSVKGVARLCLDAGINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSLTYVTA LGV LS+ GVPSYC GVRELY+NSSNVTTMDFC+ Sbjct 2199 SKLFTIAMWLLLLSICLGSLTYVTAALGVFLSNFGVPSYCSGVRELYLNSSNVTTMDFCE 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLGL Sbjct 2259 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMW IISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWLIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFC+ HNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCRTHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQF+RPINPTDQS+YV+DSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFRRPINPTDQSSYVIDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47379.1 Length: 7071 Range 1: 819 to 2738 Score:3855 bits(9997), Expect:0.0, Method:Compositional matrix adjust., Identities:1855/1920(97%), Positives:1883/1920(98%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDT+LEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTILEVQGYKNVKITFELDDRVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDC+ECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCDECE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEQISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 VLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 GVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +K+EEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFAD+NGKLY Sbjct 1179 DKKEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADVNGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGED SFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV E Sbjct 1239 QDSQNMLRGEDTSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVDE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1359 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQ TELGVEFLKRGDKIVYHT GSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGSYRDWSYSGQHTELGVEFLKRGDKIVYHTAGSPIEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPN WCLRCLW+TKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1959 KLLHKPILWHINQTTNKTTYKPNTWCLRCLWTTKPVDTSNTFEVLAVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET Sbjct 2019 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHG +AINSVPWSKILAYVKPFLGQ V TSNCIKKCVQR Sbjct 2079 SITIKKPNELSLALGLKTLATHGVSAINSVPWSKILAYVKPFLGQAVVTTSNCIKKCVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNS+I+ASLPTTIAKNSVK VA+LCLD INYVKSPKF Sbjct 2139 VFNNYMPYVITLLFQLCTFTKSTNSKIRASLPTTIAKNSVKGVARLCLDAGINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSLTYVTA LGV LS+ GVPSYC GVRELY+NSSNVTTMDFC+ Sbjct 2199 SKLFTIAMWLLLLSICLGSLTYVTAALGVFLSNFGVPSYCSGVRELYLNSSNVTTMDFCE 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLGL Sbjct 2259 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMW IISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWLIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFC+ HNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCRTHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQF+RPINPTDQS+YV+DSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFRRPINPTDQSSYVIDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47339.1 Length: 7071 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47369.1 Length: 7071 Range 1: 819 to 2738 Score:3855 bits(9996), Expect:0.0, Method:Compositional matrix adjust., Identities:1855/1920(97%), Positives:1882/1920(98%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDT+LE+QGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTILEIQGYKNVKITFELDDRVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 A+VKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDC+ECE Sbjct 879 AIVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCDECE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEQISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESD YIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQNESDVYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +KEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFAD+NGKLY Sbjct 1179 DKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADVNGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGED SFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV E Sbjct 1239 QDSQNMLRGEDTSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVDE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEA+TALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEARTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1359 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQ TELGVEFLKRGDKIVYHT GSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGSYRDWSYSGQHTELGVEFLKRGDKIVYHTAGSPIEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPN WCLRCLW+TKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1959 KLLHKPILWHINQTTNKTTYKPNTWCLRCLWTTKPVDTSNTFEVLAVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET Sbjct 2019 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHG +AINSVPWSKILAYVKPFLGQ V TSNCIKKCVQR Sbjct 2079 SITIKKPNELSLALGLKTLATHGVSAINSVPWSKILAYVKPFLGQAVVTTSNCIKKCVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNS+I ASLPTTIAKNSVK VA+LCLD INYVKSPKF Sbjct 2139 VFNNYMPYVITLLFQLCTFTKSTNSKISASLPTTIAKNSVKGVARLCLDAGINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSLTYVTA LGV LS+ GVPSYC GVRELY+NSSNVTTMDFC+ Sbjct 2199 SKLFTIAMWLLLLSICLGSLTYVTAALGVFLSNFGVPSYCSGVRELYLNSSNVTTMDFCE 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLGL Sbjct 2259 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMW IISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWLIISIVQMAPVSAMVRMYIFFASFYYLWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQF+RPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFRRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47344.1 Length: 7071 Range 1: 819 to 2738 Score:3854 bits(9994), Expect:0.0, Method:Compositional matrix adjust., Identities:1854/1920(97%), Positives:1883/1920(98%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDT+LEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTILEVQGYKNVKITFELDDRVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDC+ECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCDECE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEQISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 VLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 GVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +K+EEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFAD+NGKLY Sbjct 1179 DKKEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADVNGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGED SFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV E Sbjct 1239 QDSQNMLRGEDTSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVDE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGI+DYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1359 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIMDYGVRFFFYTSKEPVASIITKLNSLNEP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQ TELGVEFLKRGDKIVYHT GSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGSYRDWSYSGQHTELGVEFLKRGDKIVYHTAGSPIEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPN WCLRCLW+TKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1959 KLLHKPILWHINQTTNKTTYKPNTWCLRCLWTTKPVDTSNTFEVLAVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET Sbjct 2019 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHG +AINSVPWSKILAYVKPFLGQ V TSNCIKKCVQR Sbjct 2079 SITIKKPNELSLALGLKTLATHGVSAINSVPWSKILAYVKPFLGQAVVTTSNCIKKCVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNS+I+ASLPTTIAKNSVK VA+LCLD INYVKSPKF Sbjct 2139 VFNNYMPYVITLLFQLCTFTKSTNSKIRASLPTTIAKNSVKGVARLCLDAGINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSLTYVTA LGV LS+ GVPSYC GVRELY+NSSNVTTMDFC+ Sbjct 2199 SKLFTIAMWLLLLSICLGSLTYVTAALGVFLSNFGVPSYCSGVRELYLNSSNVTTMDFCE 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLGL Sbjct 2259 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMW IISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWLIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFC+ HNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCRTHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQF+RPINPTDQS+YV+DSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFRRPINPTDQSSYVIDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >MAG: ORF1 protein [Severe acute respiratory syndrome-related coronavirus] Sequence ID: WCZ55805.1 Length: 4380 Range 1: 819 to 2738 Score:3853 bits(9991), Expect:0.0, Method:Compositional matrix adjust., Identities:1851/1920(96%), Positives:1879/1920(97%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP KGVTFGEDT+LEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APAKGVTFGEDTILEVQGYKNVKITFELDDRVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDC+ECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCDECE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEE+EEDWLDD EAEPEPEPLP Sbjct 939 DEEQISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEKEEDWLDDPTEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 VLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 GVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +K+EE KLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFAD+NGKLY Sbjct 1179 DKKEEQKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADVNGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGED SFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV E Sbjct 1239 QDSQNMLRGEDTSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVDE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1359 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQ TELGVEFLKRGDKIVYHT GSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGSYRDWSYSGQHTELGVEFLKRGDKIVYHTAGSPIEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DD LRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDILRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPN WCLRCLW+TKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1959 KLLHKPILWHINQTTNKTTYKPNTWCLRCLWTTKPVDTSNTFEVLAVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET Sbjct 2019 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHG +AINSVPWSKILAYVKPFLGQ V TSNCIKKCVQR Sbjct 2079 SITIKKPNELSLALGLKTLATHGVSAINSVPWSKILAYVKPFLGQAVVTTSNCIKKCVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNS+I+ASLPTTIAKNSVK VA+LCLD INYVKSPKF Sbjct 2139 VFNNYMPYVITLLFQLCTFTKSTNSKIRASLPTTIAKNSVKGVARLCLDAGINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSLTYVTA LGV LS+ GVPSYC GVRELY+NSSNVTTMDFC+ Sbjct 2199 SKLFTIAMWLLLLSICLGSLTYVTAALGVFLSNFGVPSYCSGVRELYLNSSNVTTMDFCE 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLGL Sbjct 2259 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMW IISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWLIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQF+RPINPTDQS+YV+DSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFRRPINPTDQSSYVIDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47334.1 Length: 7071 Range 1: 819 to 2738 Score:3852 bits(9990), Expect:0.0, Method:Compositional matrix adjust., Identities:1853/1920(97%), Positives:1882/1920(98%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDT+LEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTILEVQGYKNVKITFELDDRVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDC+ECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCDECE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEQISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLL+RAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLRRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 VLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 GVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +K+EEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFAD+NGKLY Sbjct 1179 DKKEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADVNGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGED SFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV E Sbjct 1239 QDSQNMLRGEDTSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVDE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1359 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLE+AARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEQAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQ TELGVEFLKRGDKIVYHT GSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGSYRDWSYSGQHTELGVEFLKRGDKIVYHTAGSPIEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDG HLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGTHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPN WCLRCLW+TKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1959 KLLHKPILWHINQTTNKTTYKPNTWCLRCLWTTKPVDTSNTFEVLAVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET Sbjct 2019 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHG +AINSVPWSKILAYVKPFLGQ V TSNCIKKCVQR Sbjct 2079 SITIKKPNELSLALGLKTLATHGVSAINSVPWSKILAYVKPFLGQAVVTTSNCIKKCVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNS+I+ASLPTTIAKNSVK VA+LCLD INYVKSPKF Sbjct 2139 VFNNYMPYVITLLFQLCTFTKSTNSKIRASLPTTIAKNSVKGVARLCLDAGINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSLTYVTA LGV LS+ GVPSYC GVRELY+NSSNVTTMDFC+ Sbjct 2199 SKLFTIAMWLLLLSICLGSLTYVTAALGVFLSNFGVPSYCSGVRELYLNSSNVTTMDFCE 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLGL Sbjct 2259 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMW IISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWLIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQF+RPINPTDQS+YV+DSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFRRPINPTDQSSYVIDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47284.1 Length: 7070 Range 1: 819 to 2737 Score:3849 bits(9982), Expect:0.0, Method:Compositional matrix adjust., Identities:1855/1920(97%), Positives:1882/1920(98%), Gaps:5/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDT+LEVQGYKNVKI FELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTILEVQGYKNVKIAFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 D+EE TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLD AIEAEPE EPLP Sbjct 939 DDEEISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDGAIEAEPEQEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKC+DIVKEAQSAKPTVIVNAAN HLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCVDIVKEAQSAKPTVIVNAANIHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ+ESD YIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQSESDGYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFG KPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLK KVESP Sbjct 1119 DVLLAPLLSAGIFGVKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKSKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 K+EEPKLEEPK VQPV E+PVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 -KKEEPKLEEPKEVQPVVERPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1237 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDV+TSGDITCVIIPAKK+GGTTEMLARALK+VPVAE Sbjct 1238 QDSQNMLRGEDMSFLEKDAPYIVGDVVTSGDITCVIIPAKKAGGTTEMLARALKKVPVAE 1297 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1298 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1357 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLN+LN+P Sbjct 1358 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNALNQP 1417 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1418 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1477 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTT SP+EFHLDGEVLPLDKLKSLLSLR Sbjct 1478 ISLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTESPVEFHLDGEVLPLDKLKSLLSLR 1537 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1538 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1597 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1598 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1657 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAAN CALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1658 QQVEVKFNAPALQEAYYRARAGDAANLCALILAYSNKTVGELGDVRETMTHLLQHANLES 1717 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1718 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1777 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGPV Sbjct 1778 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV 1837 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1838 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1897 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKL CSNTKFAD LNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1898 SFDNFKLACSNTKFADALNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1957 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1958 KLLHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNTFEVLEVEDTQGMDNLACES 2017 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QT TSEEVVENPTVQKE+IECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET Sbjct 2018 QTPTSEEVVENPTVQKEVIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 2077 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQ V TSNC+KKCVQR Sbjct 2078 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQATVTTSNCMKKCVQR 2137 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2138 VFNNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2197 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFT+VMWLLLLS CLGSL YV A GVCLSSLGVPSYCDGVR+LYINSSNVTTMDFC+ Sbjct 2198 SKLFTVVMWLLLLSTCLGSLIYVIAAFGVCLSSLGVPSYCDGVRDLYINSSNVTTMDFCE 2257 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G PCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL Sbjct 2258 GSLPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 2317 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAP+SAMVRMYIFFASFYYVWKSYVHIMDG Sbjct 2318 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPISAMVRMYIFFASFYYVWKSYVHIMDG 2377 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2378 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKVHNWNCLNCDTFCAGST 2437 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2438 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 2497 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2498 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2557 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2558 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2617 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2618 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2677 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAA+KNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2678 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAARKNNIPFRLTCATTRQVVNVITTKISLKGG 2737 >orf1a polyprotein [Severe acute respiratory syndrome-related coronavirus] Sequence ID: QSI99225.1 Length: 4380 Range 1: 820 to 2738 Score:3843 bits(9965), Expect:0.0, Method:Compositional matrix adjust., Identities:1842/1919(96%), Positives:1877/1919(97%), Gaps:4/1919(0%) Query 2 PVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAEA 61 PVKGVTFGEDT+LEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAEA Sbjct 820 PVKGVTFGEDTILEVQGYKNVKITFELDDRVDKVLNEKCSVYTVESGTEVTEFACVVAEA 879 Query 62 VVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECED 121 VVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDC+ECED Sbjct 880 VVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCDECED 939 Query 122 EE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPE 177 EE ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLPE Sbjct 940 EEQISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLPE 999 Query 178 EPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGA 237 EPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGA Sbjct 1000 EPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGA 1059 Query 238 MQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQD 297 MQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1060 MQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQG 1119 Query 298 VLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPN 357 VLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP+ Sbjct 1120 VLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESPD 1179 Query 358 KEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQ 417 K+EEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFAD+NGKLYQ Sbjct 1180 KKEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADVNGKLYQ 1239 Query 418 DSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEY 477 DSQNMLRGED SFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV EY Sbjct 1240 DSQNMLRGEDTSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVDEY 1299 Query 478 ITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEET 537 ITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEET Sbjct 1300 ITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEET 1359 Query 538 RKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPL 597 RKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPL Sbjct 1360 RKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPL 1419 Query 598 VTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETT 657 VTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1420 VTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVETI 1479 Query 658 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLRE 717 SLAGSYRDWSYSGQ TELGVEFLKRGDKIVYHT GSPIEFHLDGEVLPLDKLKSLLSLRE Sbjct 1480 SLAGSYRDWSYSGQHTELGVEFLKRGDKIVYHTAGSPIEFHLDGEVLPLDKLKSLLSLRE 1539 Query 718 VKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSD 777 VKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSD Sbjct 1540 VKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSD 1599 Query 778 DTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQ 837 DTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQ Sbjct 1600 DTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQ 1659 Query 838 QVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESA 897 QVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESA Sbjct 1660 QVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESA 1719 Query 898 KRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSF 957 KRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSF Sbjct 1720 KRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSF 1779 Query 958 VMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVT 1017 VMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVT Sbjct 1780 VMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVT 1839 Query 1018 DVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNAS 1077 DVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNAS Sbjct 1840 DVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNAS 1899 Query 1078 FDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAK 1137 FDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGAK Sbjct 1900 FDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGAK 1959 Query 1138 LVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQ 1197 L+HKPILWHINQTTNKTTYKPN WCLRCLW+TKPVDTSN+FEVL VEDTQGMDNLACES+ Sbjct 1960 LLHKPILWHINQTTNKTTYKPNTWCLRCLWTTKPVDTSNTFEVLAVEDTQGMDNLACESR 2019 Query 1198 TTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETS 1257 TSEEVVENPT+QKE+IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAYVE TS Sbjct 2020 QPTSEEVVENPTIQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAYVENTS 2079 Query 1258 ITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRV 1317 ITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ AV TSNC K+ VQR+ Sbjct 2080 ITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAAVTTSNCAKRLVQRM 2139 Query 1318 FSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFS 1377 F+NYMPYV+TLLFQLCTFTKSTN RI+ASLPT IAKNSV+ VA+LCLD INYVKSPKFS Sbjct 2140 FNNYMPYVLTLLFQLCTFTKSTNFRIRASLPTIIAKNSVRGVARLCLDAGINYVKSPKFS 2199 Query 1378 KLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQG 1437 KLFTI MWLLLLSICLGSLTYVTA LGV LS+ GVPSYC GVRELY+NSSNVTTMDFC+G Sbjct 2200 KLFTIAMWLLLLSICLGSLTYVTAALGVFLSNFGVPSYCSGVRELYLNSSNVTTMDFCEG 2259 Query 1438 YFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLS 1497 FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLGLS Sbjct 2260 SFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLGLS 2319 Query 1498 AIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGC 1557 AIMQ FFGYFASHFISNSWLMW IISIVQMAPVSAMVRMYIFFASFYY+WKSYVH+MDGC Sbjct 2320 AIMQVFFGYFASHFISNSWLMWLIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHVMDGC 2379 Query 1558 TSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTF 1617 TSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGSTF Sbjct 2380 TSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGSTF 2439 Query 1618 ISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNL 1677 ISDEVARDLSLQF+RPINPTDQS+YV+DSV VKNGALHLYFDKAGQKTYERHPLSHFVNL Sbjct 2440 ISDEVARDLSLQFRRPINPTDQSSYVIDSVAVKNGALHLYFDKAGQKTYERHPLSHFVNL 2499 Query 1678 DNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDST 1737 DNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDST Sbjct 2500 DNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDST 2559 Query 1738 EVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDT 1797 EVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDT Sbjct 2560 EVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDT 2619 Query 1798 DVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVA 1857 DVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVA Sbjct 2620 DVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVA 2679 Query 1858 KSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 KSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2680 KSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >MAG: ORF1a protein [Severe acute respiratory syndrome-related coronavirus] Sequence ID: WCZ55798.1 Length: 4375 Range 1: 819 to 2733 Score:3843 bits(9965), Expect:0.0, Method:Compositional matrix adjust., Identities:1848/1920(96%), Positives:1877/1920(97%), Gaps:9/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP KGVTFGEDT+LEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APAKGVTFGEDTILEVQGYKNVKITFELDDRVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDC+ECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCDECE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEE+EEDWLD EPEPEPLP Sbjct 939 DEEQISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEKEEDWLD-----EPEPEPLP 993 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 994 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1053 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1054 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1113 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 VLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1114 GVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1173 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +K+EE KLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFAD+NGKLY Sbjct 1174 DKKEEQKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADVNGKLY 1233 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGED SFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV E Sbjct 1234 QDSQNMLRGEDTSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVDE 1293 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1294 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1353 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEG+VDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1354 TRKLMPICLDVRAIMATIQRKYKGIKVQEGVVDYGVRFFFYTSKEPVASIITKLNSLNEP 1413 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1414 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1473 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQ TELGVEFLKRGDKIVYHT GSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1474 ISLAGSYRDWSYSGQHTELGVEFLKRGDKIVYHTAGSPIEFHLDGEVLPLDKLKSLLSLR 1533 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1534 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1593 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1594 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1653 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1654 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1713 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1714 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1773 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1774 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1833 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1834 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1893 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1894 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1953 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPN WCLRCLW+TKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1954 KLLHKPILWHINQTTNKTTYKPNTWCLRCLWTTKPVDTSNTFEVLAVEDTQGMDNLACES 2013 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET Sbjct 2014 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 2073 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHG +AINSVPWSKILAYVKPFLGQ V TSNCIKKCVQR Sbjct 2074 SITIKKPNELSLALGLKTLATHGVSAINSVPWSKILAYVKPFLGQAVVTTSNCIKKCVQR 2133 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNS+I+ASLPTTIAKNSVK VA+LCLD INYVKSPKF Sbjct 2134 VFNNYMPYVITLLFQLCTFTKSTNSKIRASLPTTIAKNSVKGVARLCLDAGINYVKSPKF 2193 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSLTYVTA LGV LS+ GVPSYC GVRELY+NSSNVTTMDFC+ Sbjct 2194 SKLFTIAMWLLLLSICLGSLTYVTAALGVFLSNFGVPSYCSGVRELYLNSSNVTTMDFCE 2253 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLGL Sbjct 2254 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLGL 2313 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMW IISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2314 SAIMQVFFGYFASHFISNSWLMWLIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2373 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2374 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGST 2433 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQF+RPINPTDQS+YV+DSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2434 FISDEVARDLSLQFRRPINPTDQSSYVIDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2493 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2494 LDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2553 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2554 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2613 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2614 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2673 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2674 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2733 >orf1ab polyprotein [Bat SARS-like coronavirus] Sequence ID: AID16715.1 Length: 7063 Range 1: 813 to 2731 Score:3841 bits(9961), Expect:0.0, Method:Compositional matrix adjust., Identities:1848/1920(96%), Positives:1884/1920(98%), Gaps:5/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP K VTFG+DTV+EVQGYK+V ITFELD R+DKVLNEKCS YTVE GTEV EFACVVA+ Sbjct 813 APTK-VTFGDDTVIEVQGYKSVNITFELDERIDKVLNEKCSNYTVELGTEVNEFACVVAD 871 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AV+KTLQPVS+LLTP+GIDLDEWS+AT+YLFD++GE KLSSRMYCSFYPPDEEEDC+ECE Sbjct 872 AVIKTLQPVSELLTPLGIDLDEWSMATYYLFDESGEFKLSSRMYCSFYPPDEEEDCDECE 931 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE E CEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDD IE EPEPEPLP Sbjct 932 DEEQISEEACEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDVIETEPEPEPLP 991 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 992 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1051 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIR NGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1052 AMQNESDEYIRLNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1111 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKV+SP Sbjct 1112 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVKSP 1171 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLF+DINGKLY Sbjct 1172 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFSDINGKLY 1231 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPVAE Sbjct 1232 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVAE 1291 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1292 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1351 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQ+G+VDYGVRFFFYTS+EPVASIITKLNSLNEP Sbjct 1352 TRKLMPICLDVRAIMATIQRKYKGIKVQKGLVDYGVRFFFYTSEEPVASIITKLNSLNEP 1411 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1412 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1471 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 TSLAGSYRDWSYSGQ TELGVEFLKRGDKIVYH TGSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1472 TSLAGSYRDWSYSGQHTELGVEFLKRGDKIVYHNTGSPIEFHLDGEVLPLDKLKSLLSLR 1531 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSM YGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1532 EVKTIKVFTTVDNTNLHTHIVDMSMPYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1591 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTS+KWADNNCYLSSVLLAL Sbjct 1592 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSVKWADNNCYLSSVLLAL 1651 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1652 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1711 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTL+GVEAVMYMGTLSYDELKTGVS+PCVCG NATQYLVQQESS Sbjct 1712 AKRVLNVVCKHCGQKTTTLRGVEAVMYMGTLSYDELKTGVSVPCVCGCNATQYLVQQESS 1771 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPP EYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1772 FVMMSAPPTEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1831 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1832 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1891 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKP+SRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1892 SFDNFKLTCSNTKFADDLNQMTGFKKPSSRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1951 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPN WCLRCLWSTKPVDTSN+FEVLVVEDTQGMDNLACES Sbjct 1952 KLLHKPILWHINQTTNKTTYKPNTWCLRCLWSTKPVDTSNTFEVLVVEDTQGMDNLACES 2011 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKP+EEGVK+T ELGHEDLMAAYVEET Sbjct 2012 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPAEEGVKITPELGHEDLMAAYVEET 2071 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHG AAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR Sbjct 2072 SITIKKPNELSLALGLKTLATHGTAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 2131 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2132 VFNNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2191 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTIVMWLLLLSICLGSLTYVTA LGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ Sbjct 2192 SKLFTIVMWLLLLSICLGSLTYVTAALGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 2251 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL Sbjct 2252 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 2311 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFA FYYVWK YVHIMDG Sbjct 2312 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFAFFYYVWKGYVHIMDG 2371 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST Sbjct 2372 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 2431 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQSAY+VDSVTVKNGALHLYFDKAGQK YERHPLSHFVN Sbjct 2432 FISDEVARDLSLQFKRPINPTDQSAYIVDSVTVKNGALHLYFDKAGQKAYERHPLSHFVN 2491 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAA+SASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2492 LDNLRANNTKGSLPINVIVFDGKSKCEESAARSASVYYSQLMCQPILLLDQALVSDVGDS 2551 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHS LAKGVALDGVLSTFVSAARQGVVD Sbjct 2552 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSALAKGVALDGVLSTFVSAARQGVVD 2611 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHH+DIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2612 TDVDTKDVIECLKLSHHTDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2671 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVI TKISLKGG Sbjct 2672 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVINTKISLKGG 2731 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47309.1 Length: 7070 Range 1: 819 to 2737 Score:3836 bits(9948), Expect:0.0, Method:Compositional matrix adjust., Identities:1852/1920(96%), Positives:1878/1920(97%), Gaps:5/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNV ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVNITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEE E Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEEYE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 D+EE TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWL DA+EAE EPEPLP Sbjct 939 DDEEISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLGDAMEAELEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAAN HLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANIHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLL+ AYENFNSQ Sbjct 1059 AMQKESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLRMAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 VLLAPLLSAGIFGAKPLQSLK+CVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 GVLLAPLLSAGIFGAKPLQSLKICVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 K+E+PKLEE K VQPVAE+PVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 -KKEDPKLEESKEVQPVAERPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1237 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPVAE Sbjct 1238 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVAE 1297 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSE PNEKEEVLGTVSWNLREMLAHAEE Sbjct 1298 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSEAPNEKEEVLGTVSWNLREMLAHAEE 1357 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1358 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1417 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLK PAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1418 LVTMPIGYVTHGLNLEEAARCMRSLKTPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1477 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1478 ISLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTIESPIEFHLDGEVLPLDKLKSLLSLR 1537 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTH+VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1538 EVKTIKVFTTVDNTNLHTHVVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1597 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1598 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1657 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1658 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1717 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTL+GVEAVMYMGTLSYDELKTGVS+PCVCGRNATQYLVQQESS Sbjct 1718 AKRVLNVVCKHCGQKTTTLRGVEAVMYMGTLSYDELKTGVSVPCVCGRNATQYLVQQESS 1777 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKL+QGAFLCANEYTGNYQCGHYTHITAKE LYR+DGAHLTKMSEYKGPV Sbjct 1778 FVMMSAPPAEYKLRQGAFLCANEYTGNYQCGHYTHITAKEMLYRIDGAHLTKMSEYKGPV 1837 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1838 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1897 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1898 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1957 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYK N WCLRCLWSTKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1958 KLLHKPILWHINQTTNKTTYKSNTWCLRCLWSTKPVDTSNTFEVLAVEDTQGMDNLACES 2017 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKE+IECDVKTTEVVGNVILKP+EEGVKVT ELGHEDLMAAYVEET Sbjct 2018 QTTTSEEVVENPTVQKEVIECDVKTTEVVGNVILKPAEEGVKVTPELGHEDLMAAYVEET 2077 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQ V TSNCIKKCVQR Sbjct 2078 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQAVVTTSNCIKKCVQR 2137 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2138 VFNNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2197 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTIV WLLLLSICLGSL YV A GVCLSSLGVPSYCDGVR+LYINSSNVTTMDFC+ Sbjct 2198 SKLFTIVTWLLLLSICLGSLIYVIAAFGVCLSSLGVPSYCDGVRDLYINSSNVTTMDFCE 2257 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G PCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL Sbjct 2258 GSLPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 2317 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SA+MQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG Sbjct 2318 SAVMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 2377 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2378 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKVHNWNCLNCDTFCAGST 2437 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2438 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 2497 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2498 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2557 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2558 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2617 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2618 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2677 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2678 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2737 >ORF1a polyprotein [Severe acute respiratory syndrome-related coronavirus] Sequence ID: WEG19431.1 Length: 4371 >ORF1a polyprotein [Severe acute respiratory syndrome-related coronavirus] Sequence ID: WEG19441.1 Length: 4371 Range 1: 819 to 2729 Score:3836 bits(9948), Expect:0.0, Method:Compositional matrix adjust., Identities:1847/1920(96%), Positives:1873/1920(97%), Gaps:13/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDT+LEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTILEVQGYKNVKITFELDDRVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDC+ECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCDECE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEQISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 VLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 GVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +KEEEPKLEEPKAVQPV +IKACIDEVTTTLEETKFLTNKLLLFAD+NGKLY Sbjct 1179 DKEEEPKLEEPKAVQPV---------EIKACIDEVTTTLEETKFLTNKLLLFADVNGKLY 1229 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGED SFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV E Sbjct 1230 QDSQNMLRGEDTSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVDE 1289 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1290 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1349 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1350 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1409 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1410 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1469 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1470 ISLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 1529 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGP YLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1530 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPIYLDGADVTKIKPHVNHEGKTFFVLPS 1589 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1590 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1649 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1650 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1709 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1710 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1769 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1770 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1829 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1830 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1889 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTC NTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1890 SFDNFKLTCFNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1949 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPNIWCLRCLW TKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1950 KLLHKPILWHINQTTNKTTYKPNIWCLRCLWITKPVDTSNTFEVLAVEDTQGMDNLACES 2009 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPS EGVKVTQELGHEDLMAAYVEET Sbjct 2010 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSAEGVKVTQELGHEDLMAAYVEET 2069 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHG +AINSVPWSKILAYVKPFLGQ V TSNCIKKCVQR Sbjct 2070 SITIKKPNELSLALGLKTLATHGVSAINSVPWSKILAYVKPFLGQAVVTTSNCIKKCVQR 2129 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNS+I+ASLPTTIAKNSVK VA+LCLD INYVKSPKF Sbjct 2130 VFNNYMPYVITLLFQLCTFTKSTNSKIRASLPTTIAKNSVKGVARLCLDAGINYVKSPKF 2189 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSLTYVTA LGV LS+ GVPSYC GVRELY+NSSNVTTMDFC+ Sbjct 2190 SKLFTIAMWLLLLSICLGSLTYVTAALGVFLSNFGVPSYCSGVRELYLNSSNVTTMDFCE 2249 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLGL Sbjct 2250 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLGL 2309 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMW IISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2310 SAIMQVFFGYFASHFISNSWLMWLIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2369 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2370 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGST 2429 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQF+RPINPTDQ++YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2430 FISDEVARDLSLQFRRPINPTDQASYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2489 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2490 LDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2549 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2550 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2609 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2610 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2669 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2670 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2729 >orf1ab polyprotein [Severe acute respiratory syndrome-related coronavirus] Sequence ID: QSI99215.1 Length: 7071 Range 1: 820 to 2738 Score:3834 bits(9943), Expect:0.0, Method:Compositional matrix adjust., Identities:1842/1919(96%), Positives:1877/1919(97%), Gaps:4/1919(0%) Query 2 PVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAEA 61 PVKGVTFGEDT+LEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAEA Sbjct 820 PVKGVTFGEDTILEVQGYKNVKITFELDDRVDKVLNEKCSVYTVESGTEVTEFACVVAEA 879 Query 62 VVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECED 121 VVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDC+ECED Sbjct 880 VVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCDECED 939 Query 122 EE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPE 177 EE ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLPE Sbjct 940 EEQISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLPE 999 Query 178 EPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGA 237 EPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGA Sbjct 1000 EPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGA 1059 Query 238 MQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQD 297 MQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1060 MQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQG 1119 Query 298 VLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPN 357 VLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP+ Sbjct 1120 VLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESPD 1179 Query 358 KEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQ 417 K+EEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFAD+NGKLYQ Sbjct 1180 KKEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADVNGKLYQ 1239 Query 418 DSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEY 477 DSQNMLRGED SFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV EY Sbjct 1240 DSQNMLRGEDTSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVDEY 1299 Query 478 ITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEET 537 ITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEET Sbjct 1300 ITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEET 1359 Query 538 RKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPL 597 RKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPL Sbjct 1360 RKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPL 1419 Query 598 VTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETT 657 VTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1420 VTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVETI 1479 Query 658 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLRE 717 SLAGSYRDWSYSGQ TELGVEFLKRGDKIVYHT GSPIEFHLDGEVLPLDKLKSLLSLRE Sbjct 1480 SLAGSYRDWSYSGQHTELGVEFLKRGDKIVYHTAGSPIEFHLDGEVLPLDKLKSLLSLRE 1539 Query 718 VKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSD 777 VKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSD Sbjct 1540 VKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSD 1599 Query 778 DTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQ 837 DTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQ Sbjct 1600 DTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQ 1659 Query 838 QVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESA 897 QVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESA Sbjct 1660 QVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESA 1719 Query 898 KRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSF 957 KRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSF Sbjct 1720 KRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSF 1779 Query 958 VMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVT 1017 VMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVT Sbjct 1780 VMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVT 1839 Query 1018 DVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNAS 1077 DVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNAS Sbjct 1840 DVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNAS 1899 Query 1078 FDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAK 1137 FDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGAK Sbjct 1900 FDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGAK 1959 Query 1138 LVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQ 1197 L+HKPILWHINQTTNKTTYKPN WCLRCLW+TKPVDTSN+FEVL VEDTQGMDNLACES+ Sbjct 1960 LLHKPILWHINQTTNKTTYKPNTWCLRCLWTTKPVDTSNTFEVLAVEDTQGMDNLACESR 2019 Query 1198 TTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETS 1257 TSEEVVENPT+QKE+IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAYVE TS Sbjct 2020 QPTSEEVVENPTIQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAYVENTS 2079 Query 1258 ITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRV 1317 ITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ AV TSNC K+ VQR+ Sbjct 2080 ITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAAVTTSNCAKRLVQRM 2139 Query 1318 FSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFS 1377 F+NYMPYV+TLLFQLCTFTKSTN RI+ASLPT IAKNSV+ VA+LCLD INYVKSPKFS Sbjct 2140 FNNYMPYVLTLLFQLCTFTKSTNFRIRASLPTIIAKNSVRGVARLCLDAGINYVKSPKFS 2199 Query 1378 KLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQG 1437 KLFTI MWLLLLSICLGSLTYVTA LGV LS+ GVPSYC GVRELY+NSSNVTTMDFC+G Sbjct 2200 KLFTIAMWLLLLSICLGSLTYVTAALGVFLSNFGVPSYCSGVRELYLNSSNVTTMDFCEG 2259 Query 1438 YFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLS 1497 FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLGLS Sbjct 2260 SFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLGLS 2319 Query 1498 AIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGC 1557 AIMQ FFGYFASHFISNSWLMW IISIVQMAPVSAMVRMYIFFASFYY+WKSYVH+MDGC Sbjct 2320 AIMQVFFGYFASHFISNSWLMWLIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHVMDGC 2379 Query 1558 TSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTF 1617 TSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGSTF Sbjct 2380 TSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGSTF 2439 Query 1618 ISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNL 1677 ISDEVARDLSLQF+RPINPTDQS+YV+DSV VKNGALHLYFDKAGQKTYERHPLSHFVNL Sbjct 2440 ISDEVARDLSLQFRRPINPTDQSSYVIDSVAVKNGALHLYFDKAGQKTYERHPLSHFVNL 2499 Query 1678 DNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDST 1737 DNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDST Sbjct 2500 DNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDST 2559 Query 1738 EVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDT 1797 EVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDT Sbjct 2560 EVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDT 2619 Query 1798 DVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVA 1857 DVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVA Sbjct 2620 DVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVA 2679 Query 1858 KSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 KSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2680 KSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47409.1 Length: 7070 Range 1: 819 to 2738 Score:3829 bits(9930), Expect:0.0, Method:Compositional matrix adjust., Identities:1841/1920(96%), Positives:1872/1920(97%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVQITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEE+DC+ECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEDDCDECE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEQISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +KEEE KLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 DKEEEQKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV E Sbjct 1239 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVDE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1359 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAG YRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGLYRDWSYSGQRTELGVEFLKRGDKIVYHTIESPVEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDN NLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNINLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSN KFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCSNIKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNLACES Sbjct 1959 KLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 Q TSEEVVENPT+QKE+IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAYVE T Sbjct 2019 QQPTSEEVVENPTIQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAYVENT 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAY KPFLGQ V TSNCIKKCVQR Sbjct 2079 SITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYAKPFLGQAVVTTSNCIKKCVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNSRI+ASLPTTIAKNSVK VA+LCLD INY+KSPKF Sbjct 2139 VFNNYMPYVITLLFQLCTFTKSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYLKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSL YVTA LGV L++ G PSYC GVRELY+NSSNVTTMDFC+ Sbjct 2199 SKLFTIAMWLLLLSICLGSLIYVTAALGVFLANFGAPSYCSGVRELYLNSSNVTTMDFCE 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLGL Sbjct 2259 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMW IISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWLIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47394.1 Length: 7071 Range 1: 819 to 2738 Score:3829 bits(9929), Expect:0.0, Method:Compositional matrix adjust., Identities:1842/1920(96%), Positives:1871/1920(97%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVQITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEE+DC+ECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEDDCDECE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEQISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +KEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 DKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV E Sbjct 1239 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVDE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1359 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAG YRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGLYRDWSYSGQRTELGVEFLKRGDKIVYHTIESPVEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDN NLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNINLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSN KFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCSNIKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVD SNSFEVL VEDTQGMDNLACES Sbjct 1959 KLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDMSNSFEVLAVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 Q TSEEVVENPT+QKE+IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAYVE T Sbjct 2019 QQPTSEEVVENPTIQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAYVENT 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ V TSNCIKKCVQR Sbjct 2079 SITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAVVTTSNCIKKCVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNSRI+ASLPTTIAKNSVK VA+LCLD INYVKSPKF Sbjct 2139 VFNNYMPYVITLLFQLCTFTKSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 KLFTI MWLLLLSICLGSL YVTA LGV LS+ G PSYC GVRELY+NSSNVTTMDFC+ Sbjct 2199 FKLFTIAMWLLLLSICLGSLIYVTAALGVFLSNFGAPSYCSGVRELYLNSSNVTTMDFCE 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQV ISSYKLDLT LGLAAEW LAYMLFTKFFYLLGL Sbjct 2259 GSFPCSVCLSGLDSLDSYPALETIQVMISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMW IISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWLIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1ab polyprotein [Severe acute respiratory syndrome-related coronavirus] Sequence ID: WEG19430.1 Length: 7062 >ORF1ab polyprotein [Severe acute respiratory syndrome-related coronavirus] Sequence ID: WEG19440.1 Length: 7062 Range 1: 819 to 2729 Score:3828 bits(9927), Expect:0.0, Method:Compositional matrix adjust., Identities:1847/1920(96%), Positives:1873/1920(97%), Gaps:13/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDT+LEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTILEVQGYKNVKITFELDDRVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDC+ECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCDECE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEQISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 VLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 GVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +KEEEPKLEEPKAVQPV +IKACIDEVTTTLEETKFLTNKLLLFAD+NGKLY Sbjct 1179 DKEEEPKLEEPKAVQPV---------EIKACIDEVTTTLEETKFLTNKLLLFADVNGKLY 1229 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGED SFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV E Sbjct 1230 QDSQNMLRGEDTSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVDE 1289 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1290 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1349 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1350 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1409 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1410 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1469 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1470 ISLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 1529 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGP YLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1530 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPIYLDGADVTKIKPHVNHEGKTFFVLPS 1589 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1590 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1649 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1650 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1709 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1710 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1769 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1770 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1829 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1830 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1889 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTC NTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1890 SFDNFKLTCFNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1949 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPNIWCLRCLW TKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1950 KLLHKPILWHINQTTNKTTYKPNIWCLRCLWITKPVDTSNTFEVLAVEDTQGMDNLACES 2009 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPS EGVKVTQELGHEDLMAAYVEET Sbjct 2010 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSAEGVKVTQELGHEDLMAAYVEET 2069 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHG +AINSVPWSKILAYVKPFLGQ V TSNCIKKCVQR Sbjct 2070 SITIKKPNELSLALGLKTLATHGVSAINSVPWSKILAYVKPFLGQAVVTTSNCIKKCVQR 2129 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNS+I+ASLPTTIAKNSVK VA+LCLD INYVKSPKF Sbjct 2130 VFNNYMPYVITLLFQLCTFTKSTNSKIRASLPTTIAKNSVKGVARLCLDAGINYVKSPKF 2189 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSLTYVTA LGV LS+ GVPSYC GVRELY+NSSNVTTMDFC+ Sbjct 2190 SKLFTIAMWLLLLSICLGSLTYVTAALGVFLSNFGVPSYCSGVRELYLNSSNVTTMDFCE 2249 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLGL Sbjct 2250 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLGL 2309 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMW IISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2310 SAIMQVFFGYFASHFISNSWLMWLIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2369 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2370 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGST 2429 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQF+RPINPTDQ++YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2430 FISDEVARDLSLQFRRPINPTDQASYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2489 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2490 LDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2549 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2550 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2609 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2610 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2669 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2670 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2729 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47384.1 Length: 7071 Range 1: 819 to 2738 Score:3827 bits(9925), Expect:0.0, Method:Compositional matrix adjust., Identities:1842/1920(96%), Positives:1871/1920(97%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVQITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEE+DC+ECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEDDCDECE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEQISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +KEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 DKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV E Sbjct 1239 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVDE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1359 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAG YRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGLYRDWSYSGQRTELGVEFLKRGDKIVYHTIESPVEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDN NLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNINLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSN KFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCSNIKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVD SNSFEVL VEDTQGMDNLACES Sbjct 1959 KLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDMSNSFEVLAVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 Q TSEEVVENPT+QKE+IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAYVE T Sbjct 2019 QQPTSEEVVENPTIQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAYVENT 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ V TSNCIKKCVQR Sbjct 2079 SITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAVVTTSNCIKKCVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNSRI+ASLPTTIAKNSVK VA+LCLD INYVKSPKF Sbjct 2139 VFNNYMPYVITLLFQLCTFTKSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 KLFTI MWLLLLSICLGSL YVTA LGV LS+ G PSYC GVRELY+NSSNVTTMDFC+ Sbjct 2199 FKLFTIAMWLLLLSICLGSLIYVTAALGVFLSNFGAPSYCSGVRELYLNSSNVTTMDFCE 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQV ISSYKLDLT LGLAAEW LAYMLFTKFFYLLGL Sbjct 2259 GSFPCSVCLSGLDSLDSYPALETIQVMISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMW IISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWLIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47389.1 Length: 7071 Range 1: 819 to 2738 Score:3827 bits(9924), Expect:0.0, Method:Compositional matrix adjust., Identities:1843/1920(96%), Positives:1873/1920(97%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDC+ECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCDECE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA +AEPEPEPLP Sbjct 939 DEEQISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATQAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVY+AVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYIAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 NKEEEPKLEEPK VQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 NKEEEPKLEEPKTVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV E Sbjct 1239 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVDE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1359 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAG YRDWSYSGQRTELGVEFLKRGDKIVYHTT S IEFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGLYRDWSYSGQRTELGVEFLKRGDKIVYHTTESTIEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVD SMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNTNLHTHIVDTSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQ+GGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQIGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDV+ET+T+LLQ+ANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVKETITNLLQNANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPIPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVD SNSFEVL VEDTQGMDNLACES Sbjct 1959 KLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDMSNSFEVLAVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 Q TSEEVVENPT+QKE+IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAYVE T Sbjct 2019 QQPTSEEVVENPTIQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAYVENT 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ V TSNCIKKCVQR Sbjct 2079 SITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAVVTTSNCIKKCVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNSRI+ASLPTTIAKNSVK VA+LCLD INYVKSPKF Sbjct 2139 VFNNYMPYVITLLFQLCTFTKSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSL YVTA LGV LS+ G PSYC GVRELY+NSSNVTTMDFC+ Sbjct 2199 SKLFTIAMWLLLLSICLGSLIYVTAALGVFLSNFGAPSYCSGVRELYLNSSNVTTMDFCE 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQV ISSYKLDLT LGLAAEW LAYMLFTKFFYLLGL Sbjct 2259 GSFPCSVCLSGLDSLDSYPALETIQVMISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMW IISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWLIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47404.1 Length: 7071 Range 1: 819 to 2738 Score:3826 bits(9923), Expect:0.0, Method:Compositional matrix adjust., Identities:1842/1920(96%), Positives:1873/1920(97%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVQITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEE+DC+ECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEDDCDECE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE ETCEHEYGTEDDYKGLPLEFGASTET HVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEQISEETCEHEYGTEDDYKGLPLEFGASTETLHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVN+FVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 999 EEPVNRFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +KEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 DKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV E Sbjct 1239 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVDE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKL+PICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1359 TRKLVPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAG YRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGLYRDWSYSGQRTELGVEFLKRGDKIVYHTIESPVEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDN NLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNINLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSN KFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCSNIKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNLACES Sbjct 1959 KLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 Q TSEEVVENPT+QKE+IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAYVE T Sbjct 2019 QQPTSEEVVENPTIQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAYVENT 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAY KPFLGQ V TSNCIKKCVQR Sbjct 2079 SITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYAKPFLGQAVVTTSNCIKKCVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNSRI+ASLPTTIAKNSVK VA+LCLD INYVKSPKF Sbjct 2139 VFNNYMPYVITLLFQLCTFTKSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSL YVTA LGV LS+LG PSYC GVRELY+NSSNVTTMDFC+ Sbjct 2199 SKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNLGAPSYCSGVRELYLNSSNVTTMDFCE 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLGL Sbjct 2259 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKG LPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGLLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1ab polyprotein [Bat betacoronavirus] Sequence ID: UNO59078.1 Length: 7071 Range 1: 819 to 2738 Score:3823 bits(9914), Expect:0.0, Method:Compositional matrix adjust., Identities:1836/1920(96%), Positives:1873/1920(97%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDT+LEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTILEVQGYKNVKITFELDDRVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDC+ECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCDECE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEQISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 VLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 GVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +K+E PKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFAD+NGKLY Sbjct 1179 DKKEGPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADVNGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGED SFLEKDAPYIVGDV+TSGDITCVIIPAKK+GGTTEMLARALK+VPV E Sbjct 1239 QDSQNMLRGEDTSFLEKDAPYIVGDVVTSGDITCVIIPAKKAGGTTEMLARALKKVPVDE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1359 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQ TELGVEFLKRGDKIVYHT GSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGSYRDWSYSGQHTELGVEFLKRGDKIVYHTAGSPIEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPILWHINQTTNKTTYKPN WCLRCLW+TKPVDTSN+FEVL VEDTQGMDNLACES Sbjct 1959 KLLHKPILWHINQTTNKTTYKPNTWCLRCLWTTKPVDTSNTFEVLAVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 + TSEEVVENPT+QKE+IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAYVE T Sbjct 2019 RQPTSEEVVENPTIQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAYVENT 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ AV TSNC K+ VQR Sbjct 2079 SITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAAVTTSNCAKRLVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 +F+NYMPYV+TLLFQLCTFTKSTN RI+ASLPT IAKNSV+ VA+LCLD INYVKSPKF Sbjct 2139 MFNNYMPYVLTLLFQLCTFTKSTNFRIRASLPTIIAKNSVRGVARLCLDAGINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI +WLLLLSICLGSL YVTA LGV LS+ G PSYC GVRE Y+NSSNVTTMDFC+ Sbjct 2199 SKLFTIAVWLLLLSICLGSLIYVTAALGVLLSNFGAPSYCSGVRESYLNSSNVTTMDFCE 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTK FYLLGL Sbjct 2259 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWFLAYMLFTKLFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKG ALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGAALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLS+HSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSYHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47414.1 Length: 7071 Range 1: 819 to 2738 Score:3821 bits(9909), Expect:0.0, Method:Compositional matrix adjust., Identities:1838/1920(96%), Positives:1870/1920(97%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVQITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEE+DC+ECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEDDCDECE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEQISEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +KEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 DKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIP KK+GGTTEMLARALK+VPV E Sbjct 1239 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPTKKAGGTTEMLARALKKVPVDE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1359 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAG YRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGLYRDWSYSGQRTELGVEFLKRGDKIVYHTIESPVEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDN NLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNINLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSAL+HTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALSHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSN KFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCSNIKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVD SNSFEVL VEDTQGMDNLACES Sbjct 1959 KLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDMSNSFEVLAVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 Q TSEEVVENPT+QKE+IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAYVE T Sbjct 2019 QQPTSEEVVENPTIQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAYVENT 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ V TSNCIKKCVQR Sbjct 2079 SITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAVVTTSNCIKKCVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFTKSTNSRI+ASLPTTIAKNSVK VA+LCLD INYVKSPKF Sbjct 2139 VFNNYMPYVITLLFQLCTFTKSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 KLFTI MWLLLLSICLGSL YVTA LGV LS+ G PSYC GVRELY+NSSNVTTMDFC+ Sbjct 2199 FKLFTIAMWLLLLSICLGSLIYVTAALGVFLSNFGAPSYCSGVRELYLNSSNVTTMDFCE 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQV ISSYKLDLT LGLAAEW LAYMLFTKFFYLLGL Sbjct 2259 GSFPCSVCLSGLDSLDSYPALETIQVMISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMW IISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWLIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKC++SAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCDDSAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AK+HNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKNHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47479.1 Length: 7071 Range 1: 819 to 2738 Score:3820 bits(9905), Expect:0.0, Method:Compositional matrix adjust., Identities:1834/1920(96%), Positives:1869/1920(97%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVQITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSS MYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSHMYCSFYPPDEEEDCEECE 938 Query 121 D----EEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 D EETCEHEYGTEDDYKGLPLEFGASTET HVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DAEEVSEETCEHEYGTEDDYKGLPLEFGASTETSHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAAN HLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANIHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +KEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 DKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGD+IT+GDITCVIIPAKK+GGTTEMLARALK VP AE Sbjct 1239 QDSQNMLRGEDMSFLEKDAPYIVGDIITNGDITCVIIPAKKAGGTTEMLARALKRVPAAE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEA+TALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEARTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1359 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQ T KTT+KPN WCLRCLWS KPVDTSNSFEVL VEDTQGMDNLACES Sbjct 1959 KLLHKPIVWHINQATTKTTFKPNTWCLRCLWSIKPVDTSNSFEVLAVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 + TSEEVVENPT+QKE+IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAYVE T Sbjct 2019 RQPTSEEVVENPTIQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAYVENT 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ AV TSNC K+ VQR Sbjct 2079 SITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAAVTTSNCAKRLVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 +F+NYMPYV+TLLFQLCTFTKSTN RI+ASLPTTIAKNSV+ VA+LCLD INYVKSPKF Sbjct 2139 MFNNYMPYVLTLLFQLCTFTKSTNFRIRASLPTTIAKNSVRGVARLCLDAGINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSL YVTA LGV LS+ G PSYC GVRE Y+NSSNVTTMDFC+ Sbjct 2199 SKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNFGAPSYCSGVRESYLNSSNVTTMDFCE 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTK FYLLGL Sbjct 2259 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWFLAYMLFTKLFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2439 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKG ALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGAALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47399.1 Length: 7072 Range 1: 819 to 2739 Score:3816 bits(9895), Expect:0.0, Method:Compositional matrix adjust., Identities:1840/1921(96%), Positives:1872/1921(97%), Gaps:5/1921(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVQITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEE+DC+ECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEDDCDECE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE ETCEHEYGTEDDYKGLPLEFGASTET HVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DEEQISEETCEHEYGTEDDYKGLPLEFGASTETLHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVN+FVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG Sbjct 999 EEPVNRFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFN-S 295 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYE F+ S Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYEKFSIS 1118 Query 296 QDVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVES 355 QDVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVES Sbjct 1119 QDVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVES 1178 Query 356 PNKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKL 415 P+KEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKL Sbjct 1179 PDKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKL 1238 Query 416 YQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVA 475 YQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV Sbjct 1239 YQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVD 1298 Query 476 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAE 535 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAE Sbjct 1299 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAE 1358 Query 536 ETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNE 595 ETRKL+PICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNE Sbjct 1359 ETRKLVPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNE 1418 Query 596 PLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVE 655 PLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVE Sbjct 1419 PLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVE 1478 Query 656 TTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSL 715 T SLAG YRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSLLSL Sbjct 1479 TISLAGLYRDWSYSGQRTELGVEFLKRGDKIVYHTIESPVEFHLDGEVLPLDKLKSLLSL 1538 Query 716 REVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLP 775 REVKTIKVFTTVDN NLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLP Sbjct 1539 REVKTIKVFTTVDNINLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLP 1598 Query 776 SDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA 835 SDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA Sbjct 1599 SDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA 1658 Query 836 LQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE 895 LQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE Sbjct 1659 LQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE 1718 Query 896 SAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQES 955 SAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQES Sbjct 1719 SAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQES 1778 Query 956 SFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGP 1015 SFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGP Sbjct 1779 SFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGP 1838 Query 1016 VTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPN 1075 VTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PN Sbjct 1839 VTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPN 1898 Query 1076 ASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKG 1135 ASFDNFKLTCSN KFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SFKKG Sbjct 1899 ASFDNFKLTCSNIKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKG 1958 Query 1136 AKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACE 1195 AKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNLACE Sbjct 1959 AKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNLACE 2018 Query 1196 SQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEE 1255 SQ TSEEVVENPT+QKE+IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAYVE Sbjct 2019 SQQPTSEEVVENPTIQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAYVEN 2078 Query 1256 TSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQ 1315 TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAY KPFLGQ V TSNCIKKCVQ Sbjct 2079 TSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYAKPFLGQAVVTTSNCIKKCVQ 2138 Query 1316 RVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPK 1375 RVF+NYMPYVITLLFQLCTFTKSTNSRI+ASLPTTIAKNSVK VA+LCLD INYVKSPK Sbjct 2139 RVFNNYMPYVITLLFQLCTFTKSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYVKSPK 2198 Query 1376 FSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFC 1435 FSKLFTI MWLLLLSICLGSL YVTA LGV LS+LG PSYC GVRELY+NSSNVTTMDFC Sbjct 2199 FSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNLGAPSYCSGVRELYLNSSNVTTMDFC 2258 Query 1436 QGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLG 1495 +G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLG Sbjct 2259 EGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLG 2318 Query 1496 LSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMD 1555 LSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMD Sbjct 2319 LSAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMD 2378 Query 1556 GCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGS 1615 GCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGS Sbjct 2379 GCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGS 2438 Query 1616 TFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFV 1675 TFISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFV Sbjct 2439 TFISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFV 2498 Query 1676 NLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGD 1735 NLDNLRANNTKG LPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGD Sbjct 2499 NLDNLRANNTKGLLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGD 2558 Query 1736 STEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVV 1795 STEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVV Sbjct 2559 STEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVV 2618 Query 1796 DTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ 1855 DTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ Sbjct 2619 DTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ 2678 Query 1856 VAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG 1915 VAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG Sbjct 2679 VAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG 2738 Query 1916 G 1916 G Sbjct 2739 G 2739 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47489.1 Length: 7071 Range 1: 818 to 2737 Score:3809 bits(9877), Expect:0.0, Method:Compositional matrix adjust., Identities:1829/1920(95%), Positives:1866/1920(97%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCS+YTVESGTEVTEFACVVAE Sbjct 818 APVKGVTFGEDTVLEVQGYKNVQITFELDERVDKVLNEKCSIYTVESGTEVTEFACVVAE 877 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSS MYCSFYPPDEEEDCEECE Sbjct 878 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSHMYCSFYPPDEEEDCEECE 937 Query 121 D----EEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 D EETCEHEYGTEDDYKGLPLEFGASTET HVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 938 DAEEVSEETCEHEYGTEDDYKGLPLEFGASTETSHVEEEEEEEDWLDDATEAEPEPEPLP 997 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQ AKPTVIVNAAN HLKHGGGVAGALNKATNG Sbjct 998 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQIAKPTVIVNAANIHLKHGGGVAGALNKATNG 1057 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1058 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1117 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1118 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1177 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +KEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1178 DKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1237 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGED SFLE+DAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV E Sbjct 1238 QDSQNMLRGEDTSFLEQDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVDE 1297 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1298 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1357 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLN LNEP Sbjct 1358 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNFLNEP 1417 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 L+TMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1418 LITMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1477 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSP+EFHLDGEVLPLDKLKSLLSLR Sbjct 1478 ISLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPVEFHLDGEVLPLDKLKSLLSLR 1537 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1538 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1597 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1598 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1657 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAAN CALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1658 QQVEVKFNAPALQEAYYRARAGDAANLCALILAYSNKTVGELGDVRETMTHLLQHANLES 1717 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1718 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1777 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGPV Sbjct 1778 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV 1837 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1838 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1897 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1898 SFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGA 1957 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQ T KTT+KPN WCLRCLWS KPVDTSNSFEVL VEDTQGMDNLACES Sbjct 1958 KLLHKPIVWHINQATTKTTFKPNTWCLRCLWSIKPVDTSNSFEVLAVEDTQGMDNLACES 2017 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 +TTTSEEVVENPT+QK +IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAYVE T Sbjct 2018 RTTTSEEVVENPTIQKGVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAYVENT 2077 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ AV TSNC K+ VQR Sbjct 2078 SITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAAVTTSNCAKRLVQR 2137 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 +F+NYMPYV+TLLFQLCTFTKSTN RI+ASLPTTIAKNSV+ VA+LCLD INYVKSPKF Sbjct 2138 MFNNYMPYVLTLLFQLCTFTKSTNFRIRASLPTTIAKNSVRGVARLCLDAGINYVKSPKF 2197 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSL YVTA LGV LS+ G PSYC GVRE Y+NSSNVTTMDFC+ Sbjct 2198 SKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNFGAPSYCSGVRESYLNSSNVTTMDFCE 2257 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTK FYLLGL Sbjct 2258 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWFLAYMLFTKLFYLLGL 2317 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2318 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2377 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2378 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGST 2437 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERH LSHFVN Sbjct 2438 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHLLSHFVN 2497 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2498 LDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2557 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKG ALDGVLSTFVSAARQGVVD Sbjct 2558 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGAALDGVLSTFVSAARQGVVD 2617 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2618 TDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2677 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2678 AKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2737 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47484.1 Length: 7071 Range 1: 819 to 2738 Score:3804 bits(9865), Expect:0.0, Method:Compositional matrix adjust., Identities:1828/1920(95%), Positives:1866/1920(97%), Gaps:4/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCS+YTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVQITFELDERVDKVLNEKCSIYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSS MYCSFYPPDEEEDCEECE Sbjct 879 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSHMYCSFYPPDEEEDCEECE 938 Query 121 D----EEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 D EETCEHEYGTEDDYKGLPLEFGASTET HVEEEEEEEDWLDDA EAEPEPEPLP Sbjct 939 DVEEVSEETCEHEYGTEDDYKGLPLEFGASTETSHVEEEEEEEDWLDDATEAEPEPEPLP 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAAN HLKHGGGVAGALNKATNG Sbjct 999 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANIHLKHGGGVAGALNKATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1059 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLKPKVESP Sbjct 1119 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKPKVESP 1178 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +KEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1179 DKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1238 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGED SFLE+DAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VPV E Sbjct 1239 QDSQNMLRGEDTSFLEQDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPVDE 1298 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1299 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1358 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1359 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1418 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1419 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1478 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGS +EFHLDGEVLPLDKLKSLLSLR Sbjct 1479 ISLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSLVEFHLDGEVLPLDKLKSLLSLR 1538 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1539 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1598 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1599 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1658 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAAN CALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1659 QQVEVKFNAPALQEAYYRARAGDAANLCALILAYSNKTVGELGDVRETMTHLLQHANLES 1718 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1719 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1778 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEY+LQQGAFLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGPV Sbjct 1779 FVMMSAPPAEYELQQGAFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV 1838 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1839 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1898 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1899 SFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGA 1958 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQ T KTT+KPN WCLRCLWS KPVDTSNSFEVL VEDTQGMDNLACES Sbjct 1959 KLLHKPIVWHINQATTKTTFKPNTWCLRCLWSIKPVDTSNSFEVLAVEDTQGMDNLACES 2018 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 + TSEEVV+NPT+QKE+IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAYVE T Sbjct 2019 RQPTSEEVVDNPTIQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAYVENT 2078 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ AV TSNC K+ VQR Sbjct 2079 SITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAAVTTSNCAKRLVQR 2138 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 +F+NYMPYV+TLLFQLCTFTKSTN RI+ASLPTTIAKNSV+ VA+LCLD INYVKSPKF Sbjct 2139 MFNNYMPYVLTLLFQLCTFTKSTNFRIRASLPTTIAKNSVRGVARLCLDAGINYVKSPKF 2198 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSL YVTA LGV LS+ G PSYC GVRE Y+NSSNVTTMDFC+ Sbjct 2199 SKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNFGAPSYCSGVRESYLNSSNVTTMDFCE 2258 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTK FYLLGL Sbjct 2259 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWFLAYMLFTKLFYLLGL 2318 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2319 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2378 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2379 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGST 2438 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERH LSHFVN Sbjct 2439 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHLLSHFVN 2498 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2499 LDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2558 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKG ALDGVLSTFVSAARQGVVD Sbjct 2559 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGAALDGVLSTFVSAARQGVVD 2618 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2619 TDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2678 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2679 AKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2738 >ORF1a polyprotein [Severe acute respiratory syndrome-related coronavirus] Sequence ID: WEG19451.1 Length: 4379 Range 1: 819 to 2737 Score:3683 bits(9550), Expect:0.0, Method:Compositional matrix adjust., Identities:1803/1920(94%), Positives:1856/1920(96%), Gaps:5/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP +GVTFGE+TVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APARGVTFGENTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEW VATFYLFDDAGEEKLSSRMYCSFYPPDE+E+CEE E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWGVATFYLFDDAGEEKLSSRMYCSFYPPDEDEECEEYE 938 Query 121 DEEETCE----HEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 +EEE E HEYGTEDDYKGLPLEFGASTET V+EEEEE+ L+DA+EAEPEPEPLP Sbjct 939 EEEEIPEETCEHEYGTEDDYKGLPLEFGASTETQQVDEEEEEDW-LEDAVEAEPEPEPLP 997 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQF GYLKLTDNVAIKC DIVKEAQSAKP VIVNAAN HLKHGGGVAGALNKATNG Sbjct 998 EEPVNQFTGYLKLTDNVAIKCADIVKEAQSAKPAVIVNAANIHLKHGGGVAGALNKATNG 1057 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESD+YI+QNGPLTVGGSCLLSGHNLAEKC+HVVGPNLNAGE VQLLK AYENFNSQ Sbjct 1058 AMQKESDDYIKQNGPLTVGGSCLLSGHNLAEKCMHVVGPNLNAGEAVQLLKTAYENFNSQ 1117 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPL SLK+CVE V TQVY+AVNDKSLYDQIVLDYLDSLKPKVE+P Sbjct 1118 DVLLAPLLSAGIFGAKPLHSLKVCVETVHTQVYIAVNDKSLYDQIVLDYLDSLKPKVENP 1177 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +EE PKL EPK QPVAEK DVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1178 KQEEGPKLGEPKMEQPVAEKSADVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1237 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLA+ALK+VP+ E Sbjct 1238 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLAKALKKVPIGE 1297 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTAL+KCKSAFYVLPSETPNEKEE+LGTVSWNLREMLAHAEE Sbjct 1298 YITTYPGQGCAGYTLEEAKTALRKCKSAFYVLPSETPNEKEEILGTVSWNLREMLAHAEE 1357 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPIC+DVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1358 TRKLMPICMDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1417 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSS+TPEE+FVET Sbjct 1418 LVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSRTPEEHFVET 1477 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLP+DKLKSLLSLR Sbjct 1478 VSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTMESPVEFHLDGEVLPIDKLKSLLSLR 1537 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHT +VDMSMTYGQQFGPTYLDGADVTKIKPH NHEGKTFFVLPS Sbjct 1538 EVKTIKVFTTVDNTNLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHANHEGKTFFVLPS 1597 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1598 DDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1657 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1658 QQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1717 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVL+VVCKHCGQKTTTL GVEAVMYMGTLSYD+LKTGVSIPCVCGRNATQYLVQQESS Sbjct 1718 AKRVLSVVCKHCGQKTTTLTGVEAVMYMGTLSYDDLKTGVSIPCVCGRNATQYLVQQESS 1777 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQG FLCANEYTG YQCGHYTHITAKETLYR+DGAHLTKMSEYKGPV Sbjct 1778 FVMMSAPPAEYKLQQGTFLCANEYTGTYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV 1837 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1838 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1897 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1898 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGA 1957 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFE L VEDTQGMDNLACES Sbjct 1958 KLLHKPIIWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEALAVEDTQGMDNLACES 2017 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QT+TSEEVVENPTVQ+E+IECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET Sbjct 2018 QTSTSEEVVENPTVQREVIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 2077 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQ AV TSNCIKKCVQR Sbjct 2078 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQAAVTTSNCIKKCVQR 2137 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFT+STNSRI+ASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2138 VFNNYMPYVITLLFQLCTFTRSTNSRIRASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2197 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSL YV A GV LS+LG+PSYC GVRE Y+NSSNVTTMDFC+ Sbjct 2198 SKLFTIAMWLLLLSICLGSLIYVAAAFGVLLSNLGMPSYCGGVRESYLNSSNVTTMDFCE 2257 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPC VCL+GLDSLDSYPALETIQVTISSYKLDLTFLGLAAEW LAYMLFTKFFYLLGL Sbjct 2258 GSFPCGVCLNGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWFLAYMLFTKFFYLLGL 2317 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2318 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2377 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2378 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKVHNWNCLNCDTFCAGST 2437 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2438 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2497 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2498 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2557 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2558 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2617 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2618 TDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2677 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNV+L+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2678 AKSHNVALIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2737 >ORF1ab polyprotein [Severe acute respiratory syndrome-related coronavirus] Sequence ID: WEG19450.1 Length: 7070 Range 1: 819 to 2737 Score:3671 bits(9520), Expect:0.0, Method:Compositional matrix adjust., Identities:1803/1920(94%), Positives:1856/1920(96%), Gaps:5/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP +GVTFGE+TVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APARGVTFGENTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEW VATFYLFDDAGEEKLSSRMYCSFYPPDE+E+CEE E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWGVATFYLFDDAGEEKLSSRMYCSFYPPDEDEECEEYE 938 Query 121 DEEETCE----HEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 +EEE E HEYGTEDDYKGLPLEFGASTET V+EEEEE+ L+DA+EAEPEPEPLP Sbjct 939 EEEEIPEETCEHEYGTEDDYKGLPLEFGASTETQQVDEEEEEDW-LEDAVEAEPEPEPLP 997 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQF GYLKLTDNVAIKC DIVKEAQSAKP VIVNAAN HLKHGGGVAGALNKATNG Sbjct 998 EEPVNQFTGYLKLTDNVAIKCADIVKEAQSAKPAVIVNAANIHLKHGGGVAGALNKATNG 1057 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESD+YI+QNGPLTVGGSCLLSGHNLAEKC+HVVGPNLNAGE VQLLK AYENFNSQ Sbjct 1058 AMQKESDDYIKQNGPLTVGGSCLLSGHNLAEKCMHVVGPNLNAGEAVQLLKTAYENFNSQ 1117 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPL SLK+CVE V TQVY+AVNDKSLYDQIVLDYLDSLKPKVE+P Sbjct 1118 DVLLAPLLSAGIFGAKPLHSLKVCVETVHTQVYIAVNDKSLYDQIVLDYLDSLKPKVENP 1177 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +EE PKL EPK QPVAEK DVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1178 KQEEGPKLGEPKMEQPVAEKSADVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1237 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLA+ALK+VP+ E Sbjct 1238 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLAKALKKVPIGE 1297 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTAL+KCKSAFYVLPSETPNEKEE+LGTVSWNLREMLAHAEE Sbjct 1298 YITTYPGQGCAGYTLEEAKTALRKCKSAFYVLPSETPNEKEEILGTVSWNLREMLAHAEE 1357 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPIC+DVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1358 TRKLMPICMDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1417 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSS+TPEE+FVET Sbjct 1418 LVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSRTPEEHFVET 1477 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLP+DKLKSLLSLR Sbjct 1478 VSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTMESPVEFHLDGEVLPIDKLKSLLSLR 1537 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHT +VDMSMTYGQQFGPTYLDGADVTKIKPH NHEGKTFFVLPS Sbjct 1538 EVKTIKVFTTVDNTNLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHANHEGKTFFVLPS 1597 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1598 DDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1657 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1658 QQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1717 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVL+VVCKHCGQKTTTL GVEAVMYMGTLSYD+LKTGVSIPCVCGRNATQYLVQQESS Sbjct 1718 AKRVLSVVCKHCGQKTTTLTGVEAVMYMGTLSYDDLKTGVSIPCVCGRNATQYLVQQESS 1777 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQG FLCANEYTG YQCGHYTHITAKETLYR+DGAHLTKMSEYKGPV Sbjct 1778 FVMMSAPPAEYKLQQGTFLCANEYTGTYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV 1837 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1838 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1897 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1898 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGA 1957 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFE L VEDTQGMDNLACES Sbjct 1958 KLLHKPIIWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEALAVEDTQGMDNLACES 2017 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QT+TSEEVVENPTVQ+E+IECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET Sbjct 2018 QTSTSEEVVENPTVQREVIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 2077 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQ AV TSNCIKKCVQR Sbjct 2078 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQAAVTTSNCIKKCVQR 2137 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFT+STNSRI+ASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2138 VFNNYMPYVITLLFQLCTFTRSTNSRIRASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2197 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSL YV A GV LS+LG+PSYC GVRE Y+NSSNVTTMDFC+ Sbjct 2198 SKLFTIAMWLLLLSICLGSLIYVAAAFGVLLSNLGMPSYCGGVRESYLNSSNVTTMDFCE 2257 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPC VCL+GLDSLDSYPALETIQVTISSYKLDLTFLGLAAEW LAYMLFTKFFYLLGL Sbjct 2258 GSFPCGVCLNGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWFLAYMLFTKFFYLLGL 2317 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2318 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2377 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCK HNWNCLNCDTFCAGST Sbjct 2378 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKVHNWNCLNCDTFCAGST 2437 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2438 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2497 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2498 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2557 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2558 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2617 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2618 TDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2677 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNV+L+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2678 AKSHNVALIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2737 >ORF1ab polyprotein [Bat Coronavirus RsHB20] Sequence ID: WCC63982.1 Length: 7070 Range 1: 819 to 2737 Score:3669 bits(9515), Expect:0.0, Method:Compositional matrix adjust., Identities:1809/1920(94%), Positives:1865/1920(97%), Gaps:5/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 +VVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEE E Sbjct 879 SVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEEYE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE+ TCEHEYGTEDDYKGLPLEFGASTE V+EEEEE+ L++AI A+PEPEPLP Sbjct 939 DEEDIPEETCEHEYGTEDDYKGLPLEFGASTEIQQVDEEEEEDW-LEEAIAAKPEPEPLP 997 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQF GYLKLTDNVAIKC+DIVKEAQ+AKPTVIVNAAN HLKHGGGVAG LNKATNG Sbjct 998 EEPVNQFTGYLKLTDNVAIKCVDIVKEAQNAKPTVIVNAANVHLKHGGGVAGVLNKATNG 1057 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESD YI+QNGPLTVGGSCLLSGHNLA+KC+HVVGPNLNAGEDVQLLK AYENFNSQ Sbjct 1058 AMQQESDGYIKQNGPLTVGGSCLLSGHNLAKKCMHVVGPNLNAGEDVQLLKAAYENFNSQ 1117 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLY+Q+VLDYLDSLKPKVESP Sbjct 1118 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYEQVVLDYLDSLKPKVESP 1177 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 K+E+PKLEEPK QP+ +KPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1178 EKQEDPKLEEPKVEQPIVQKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1237 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITC IIPAKK+GGTTEMLA+ALK VP E Sbjct 1238 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCAIIPAKKAGGTTEMLAKALKNVPTGE 1297 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEE+LGTVSWNLREMLAHAEE Sbjct 1298 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEILGTVSWNLREMLAHAEE 1357 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMP+C+DVRAIMATIQRKYKGIK+QEGIVDYGVRFFFYTSKEPVASIITKLN+ NEP Sbjct 1358 TRKLMPVCMDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNAFNEP 1417 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKTPEE+FVET Sbjct 1418 LVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTPEEHFVET 1477 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSLLSLR Sbjct 1478 VSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTMESPVEFHLDGEVLPLDKLKSLLSLR 1537 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHT IVDMSMTYGQQFGPTYLDGADVTKIKPH NHEGKTFFVLPS Sbjct 1538 EVKTIKVFTTVDNTNLHTQIVDMSMTYGQQFGPTYLDGADVTKIKPHFNHEGKTFFVLPS 1597 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1598 DDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1657 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1658 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1717 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 A+RVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD+LKTGVSIPCVCGR+ATQYLVQQESS Sbjct 1718 ARRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDDLKTGVSIPCVCGRSATQYLVQQESS 1777 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGPV Sbjct 1778 FVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV 1837 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1838 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1897 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1898 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGA 1957 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQTTNKTTYKPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNLACES Sbjct 1958 KLLHKPIIWHINQTTNKTTYKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNLACES 2017 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QT TSEEVVENPTVQKE+IECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET Sbjct 2018 QTPTSEEVVENPTVQKEVIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 2077 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQ AV T+NCIK+CVQR Sbjct 2078 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQAAVTTTNCIKRCVQR 2137 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFT+STNSRI+ASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2138 VFNNYMPYVITLLFQLCTFTRSTNSRIRASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2197 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSL YVTA GV LS+LG+PS+CDGVRE Y+NSSNVTTMDFC+ Sbjct 2198 SKLFTIAMWLLLLSICLGSLIYVTAAFGVLLSNLGIPSHCDGVRESYLNSSNVTTMDFCE 2257 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCL+GLDSLD+YPALETIQVTISSYKLDLTFLGLAAEW+LAYMLFTKFFYLLGL Sbjct 2258 GSFPCSVCLNGLDSLDTYPALETIQVTISSYKLDLTFLGLAAEWVLAYMLFTKFFYLLGL 2317 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2318 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2377 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST Sbjct 2378 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 2437 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2438 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2497 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2498 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2557 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALV+TAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2558 TEVSVKMFDAYVDTFSATFSVPMEKLKALVSTAHSELAKGVALDGVLSTFVSAARQGVVD 2617 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2618 TDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2677 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2678 AKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2737 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47504.1 Length: 7067 Range 1: 819 to 2734 Score:3666 bits(9507), Expect:0.0, Method:Compositional matrix adjust., Identities:1797/1920(94%), Positives:1856/1920(96%), Gaps:8/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEV EFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVAEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEW VATFYLFDDAGEEKLSSRMYCSFYPPDEEE+CEE E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWGVATFYLFDDAGEEKLSSRMYCSFYPPDEEEECEEYE 938 Query 121 D----EEETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 + ETCEHEYGTEDDYKGLPLEFGAST+ EEEEEEDWLDDA+EAEPEPEPL Sbjct 939 EEEEISAETCEHEYGTEDDYKGLPLEFGASTQQV---EEEEEEDWLDDAVEAEPEPEPLS 995 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQF GYLKLTDNVAIKC+DIV+EAQSAKPTVIVNAAN HLKHGGGVAGALNKATNG Sbjct 996 EEPVNQFTGYLKLTDNVAIKCVDIVREAQSAKPTVIVNAANIHLKHGGGVAGALNKATNG 1055 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESD+YI+QNGPL VG SCLLSGHNLA+KC+HVVGPNLNAGEDVQLLK AYENFNSQ Sbjct 1056 AMQQESDDYIKQNGPLVVGSSCLLSGHNLAKKCMHVVGPNLNAGEDVQLLKAAYENFNSQ 1115 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 +VLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQ+VLDYLDSLKPKVE+P Sbjct 1116 EVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQVVLDYLDSLKPKVETP 1175 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 K+EEPKLEEPK PV E+P DVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1176 -KQEEPKLEEPKMETPVTERPADVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1234 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 +DSQNMLRGED+SFLEKDAPYIVGDVITSGDITC IIPAKK+GGTTEMLA+ALK+VPV E Sbjct 1235 RDSQNMLRGEDISFLEKDAPYIVGDVITSGDITCAIIPAKKAGGTTEMLAKALKKVPVGE 1294 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEE+LGTVSWNLREMLAHAEE Sbjct 1295 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEILGTVSWNLREMLAHAEE 1354 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMP+C+DVRAIMATIQRKYKGIK+QEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1355 TRKLMPVCMDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1414 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKTPEE+F+ET Sbjct 1415 LVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTPEEHFIET 1474 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAG+YRDWSYSGQRTELGVEFLKRGDKIVYHT +P+EFHLDGEVLPLDKLKSLLSLR Sbjct 1475 ISLAGTYRDWSYSGQRTELGVEFLKRGDKIVYHTIENPVEFHLDGEVLPLDKLKSLLSLR 1534 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHT IVDMSMTYGQQFGPTYLDGADVTK+KPHVNHEGKTFFVLPS Sbjct 1535 EVKTIKVFTTVDNTNLHTQIVDMSMTYGQQFGPTYLDGADVTKVKPHVNHEGKTFFVLPS 1594 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1595 DDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1654 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1655 QQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1714 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1715 AKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1774 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGPV Sbjct 1775 FVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV 1834 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1835 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1894 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSN KFADDLNQMTGFKKPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1895 SFDNFKLTCSNVKFADDLNQMTGFKKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGA 1954 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQTTNKTTYKPN WCLRCLWSTKPV+TSNSFEVL VEDTQGMDNLACES Sbjct 1955 KLLHKPIIWHINQTTNKTTYKPNTWCLRCLWSTKPVETSNSFEVLEVEDTQGMDNLACES 2014 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 TSEEVVENPT+QKE+IECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVE T Sbjct 2015 HAPTSEEVVENPTIQKEVIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVENT 2074 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHG AAINSVPWSKILAYVKPFLGQ A TSNC+KKCVQR Sbjct 2075 SITIKKPNELSLALGLKTLATHGVAAINSVPWSKILAYVKPFLGQAATTTSNCMKKCVQR 2134 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 +F+NYMPYVITLLFQLCTFT+STNSRIKASLPTTIAKNSVKSVAKLC+DVCINYVKSPKF Sbjct 2135 IFNNYMPYVITLLFQLCTFTRSTNSRIKASLPTTIAKNSVKSVAKLCVDVCINYVKSPKF 2194 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSL YVTA GV LS+LG+PSYCDGVR+ YINSSNVTTMDFC+ Sbjct 2195 SKLFTIAMWLLLLSICLGSLIYVTAAFGVLLSNLGIPSYCDGVRDHYINSSNVTTMDFCE 2254 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYP+LETIQVTISSYKLDLTFLGLAAEW LAYMLFTKFFYLLGL Sbjct 2255 GSFPCSVCLSGLDSLDSYPSLETIQVTISSYKLDLTFLGLAAEWFLAYMLFTKFFYLLGL 2314 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2315 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2374 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST Sbjct 2375 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 2434 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2435 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2494 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2495 LDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2554 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPM+KLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2555 TEVSVKMFDAYVDTFSATFSVPMDKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2614 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2615 TDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2674 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNV+L+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2675 AKSHNVALIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2734 >ORF1ab polyprotein [BtRs-BetaCoV/HuB2013] Sequence ID: AIA62309.1 Length: 7070 Range 1: 819 to 2737 Score:3665 bits(9504), Expect:0.0, Method:Compositional matrix adjust., Identities:1813/1920(94%), Positives:1864/1920(97%), Gaps:5/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEE E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEEYE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE+ TCEHEYGTEDDYKGLPLEFGASTE V+EEEEE+ L++AI AEPEP PLP Sbjct 939 DEEDIPEETCEHEYGTEDDYKGLPLEFGASTEAQQVDEEEEEDW-LEEAIAAEPEPVPLP 997 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQF GYLKLTDNVAIKC+DIVKEAQSAKPTVIVNAAN HLKHGGGVAGALNKATNG Sbjct 998 EEPVNQFTGYLKLTDNVAIKCVDIVKEAQSAKPTVIVNAANVHLKHGGGVAGALNKATNG 1057 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESD YI+QNGPLTVGGSCLLSGHNLA+KC+HVVGPNLNAGEDVQLLK AYENFNSQ Sbjct 1058 AMQQESDGYIKQNGPLTVGGSCLLSGHNLAKKCMHVVGPNLNAGEDVQLLKAAYENFNSQ 1117 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQ+VLDYLDSLKPKVESP Sbjct 1118 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQVVLDYLDSLKPKVESP 1177 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 KEE+PKL+EPK QP +KPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1178 EKEEDPKLDEPKVEQPTVQKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1237 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITC IIPAKK+GGTTEMLA+ALK VP E Sbjct 1238 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCAIIPAKKAGGTTEMLAKALKNVPTGE 1297 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEE+LGTVSWNLREMLAHAEE Sbjct 1298 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEILGTVSWNLREMLAHAEE 1357 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMP+C+DVRAIMATIQRKYKGIK+QEGIVDYGVRFFFYTSKEPVASIITKLN+ NEP Sbjct 1358 TRKLMPVCMDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNAFNEP 1417 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKTPEE+FVET Sbjct 1418 LVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTPEEHFVET 1477 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSLLSLR Sbjct 1478 VSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTMESPVEFHLDGEVLPLDKLKSLLSLR 1537 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHT IVDMSMTYGQQFGPTYLDGADVTKIKPH NHEGKTFFVLPS Sbjct 1538 EVKTIKVFTTVDNTNLHTQIVDMSMTYGQQFGPTYLDGADVTKIKPHFNHEGKTFFVLPS 1597 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1598 DDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1657 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1658 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1717 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 A+RVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD+LKTGVSIPCVCGR+ATQYLVQQESS Sbjct 1718 ARRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDDLKTGVSIPCVCGRSATQYLVQQESS 1777 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGPV Sbjct 1778 FVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV 1837 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1838 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1897 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1898 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGA 1957 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQTTNKTTYKPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNLACES Sbjct 1958 KLLHKPIIWHINQTTNKTTYKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNLACES 2017 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QT TSEEVVENPTVQKE+IECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET Sbjct 2018 QTPTSEEVVENPTVQKEVIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 2077 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQ AV T+NCIK+CVQR Sbjct 2078 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQAAVTTTNCIKRCVQR 2137 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFT+STNSRI+ASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2138 VFNNYMPYVITLLFQLCTFTRSTNSRIRASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2197 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSL YVTA GV LS+LG+PS+CDGVRE Y+NSSNVTTMDFC+ Sbjct 2198 SKLFTIAMWLLLLSICLGSLIYVTAAFGVLLSNLGIPSHCDGVRESYLNSSNVTTMDFCE 2257 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCL+GLDSLD+YPALETIQVTISSYKLDLTFLGLAAEW+LAYMLFTKFFYLLGL Sbjct 2258 GSFPCSVCLNGLDSLDTYPALETIQVTISSYKLDLTFLGLAAEWVLAYMLFTKFFYLLGL 2317 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2318 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2377 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST Sbjct 2378 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 2437 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2438 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2497 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2498 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2557 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALV+TAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2558 TEVSVKMFDAYVDTFSATFSVPMEKLKALVSTAHSELAKGVALDGVLSTFVSAARQGVVD 2617 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2618 TDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2677 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2678 AKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2737 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47449.1 Length: 7070 Range 1: 819 to 2737 Score:3663 bits(9499), Expect:0.0, Method:Compositional matrix adjust., Identities:1812/1920(94%), Positives:1863/1920(97%), Gaps:5/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEW VATFYLFDDAGEEKLSSRMYCSFYPPD+EED EE E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWGVATFYLFDDAGEEKLSSRMYCSFYPPDDEEDYEEYE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 +EEE TCEHEYGTEDDYKGLPLEFGASTET V+EEEEE+ L+DA+EAEPE EPLP Sbjct 939 EEEEIPEETCEHEYGTEDDYKGLPLEFGASTETQQVDEEEEEDW-LEDAVEAEPESEPLP 997 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQF GYLKLTDNVAIKC DIVKEAQSAKPTVIVNAAN HLKHGGGVAG+LNKATNG Sbjct 998 EEPVNQFTGYLKLTDNVAIKCADIVKEAQSAKPTVIVNAANIHLKHGGGVAGSLNKATNG 1057 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESD+YI+QNGPLTVGGSCLLSGHNLA+KC+HVVGPNLNAGEDVQLL+ AYENFNSQ Sbjct 1058 AMQQESDDYIKQNGPLTVGGSCLLSGHNLAKKCMHVVGPNLNAGEDVQLLETAYENFNSQ 1117 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLK+CVE V TQVY+AVNDKSLYDQ+VLDYLDSLKPKVE P Sbjct 1118 DVLLAPLLSAGIFGAKPLQSLKVCVETVHTQVYIAVNDKSLYDQVVLDYLDSLKPKVEPP 1177 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 ++EEPKLEEPK Q VA+KP DVKPK+KACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1178 KQKEEPKLEEPKMDQSVAQKPADVKPKVKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1237 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLA+ALK+VPV E Sbjct 1238 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLAKALKKVPVDE 1297 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEE+LGTVSWNLREMLAHAEE Sbjct 1298 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEILGTVSWNLREMLAHAEE 1357 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPIC+DVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1358 TRKLMPICMDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1417 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKTPEE+FVET Sbjct 1418 LVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTPEEHFVET 1477 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSY GQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSLLSLR Sbjct 1478 VSLAGSYRDWSYLGQRTELGVEFLKRGDKIVYHTMESPVEFHLDGEVLPLDKLKSLLSLR 1537 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHT IVDMSMTYGQQFGPTYLDGADVTKIKPH NHEGKTFFVLPS Sbjct 1538 EVKTIKVFTTVDNTNLHTQIVDMSMTYGQQFGPTYLDGADVTKIKPHANHEGKTFFVLPS 1597 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1598 DDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1657 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1658 QQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1717 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1718 AKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1777 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGPV Sbjct 1778 FVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV 1837 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1838 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1897 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTC NTKFADDLNQMTGFKKPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1898 SFDNFKLTCYNTKFADDLNQMTGFKKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGA 1957 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQTTNKTTYKPN+WCLRCLWSTKPV TSNSFEVL VEDTQGMDNLACES Sbjct 1958 KLLHKPIIWHINQTTNKTTYKPNMWCLRCLWSTKPVGTSNSFEVLAVEDTQGMDNLACES 2017 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QT TSEEVVENPTVQKE+IECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET Sbjct 2018 QTPTSEEVVENPTVQKEVIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 2077 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQ AV TSNCIKKCVQR Sbjct 2078 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQAAVTTSNCIKKCVQR 2137 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLC FTK TNSRI+ASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2138 VFNNYMPYVITLLFQLCAFTKGTNSRIRASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2197 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSL YVTA LGV LS+LG+PSYCDGVR+LY+NSSNVT+MDFC+ Sbjct 2198 SKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNLGIPSYCDGVRDLYVNSSNVTSMDFCE 2257 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEW+LAYMLFTKFFYLLGL Sbjct 2258 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWVLAYMLFTKFFYLLGL 2317 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAP+SAMVRMYIFFASFYYVWKSYVHIMDG Sbjct 2318 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPISAMVRMYIFFASFYYVWKSYVHIMDG 2377 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST Sbjct 2378 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 2437 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2438 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2497 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEE+AAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2498 LDNLRANNTKGSLPINVIVFDGKSKCEEAAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2557 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLK LVATAHSELAKGVALDGVLSTF+SAARQGVVD Sbjct 2558 TEVSVKMFDAYVDTFSATFSVPMEKLKTLVATAHSELAKGVALDGVLSTFISAARQGVVD 2617 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2618 TDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2677 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2678 AKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2737 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47574.1 Length: 7069 Range 1: 820 to 2736 Score:3659 bits(9488), Expect:0.0, Method:Compositional matrix adjust., Identities:1814/1919(95%), Positives:1864/1919(97%), Gaps:6/1919(0%) Query 2 PVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAEA 61 PVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAEA Sbjct 820 PVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAEA 879 Query 62 VVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECED 121 VVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEE ED Sbjct 880 VVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEEYED 939 Query 122 EEETCE----HEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLPE 177 EEE E HEYGTEDDYKGLPLEFGASTE V+EEEEE+ L++AI A+PE EPLPE Sbjct 940 EEEIPEETCEHEYGTEDDYKGLPLEFGASTEIQQVDEEEEEDW-LEEAIAAKPEQEPLPE 998 Query 178 EPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNGA 237 EPVNQF GYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAAN HLKHGGGVAGALNKATNGA Sbjct 999 EPVNQFTGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANIHLKHGGGVAGALNKATNGA 1058 Query 238 MQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQD 297 MQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGED+QLLKRAYENFNSQD Sbjct 1059 MQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDIQLLKRAYENFNSQD 1118 Query 298 VLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESPN 357 VLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLK KVES + Sbjct 1119 VLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKSKVES-S 1177 Query 358 KEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQ 417 K+EEPKLEEPK VQPV E+ VDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQ Sbjct 1178 KKEEPKLEEPKEVQPVVERRVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYQ 1237 Query 418 DSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAEY 477 DSQNMLRGEDMSFLEKDAPYIVGDV+TSGDITCVIIPAKK+GGTTEMLARALK+VP AEY Sbjct 1238 DSQNMLRGEDMSFLEKDAPYIVGDVVTSGDITCVIIPAKKAGGTTEMLARALKKVPAAEY 1297 Query 478 ITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEET 537 ITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEET Sbjct 1298 ITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEET 1357 Query 538 RKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPL 597 RKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLN+LN+PL Sbjct 1358 RKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNALNQPL 1417 Query 598 VTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVETT 657 VTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVETT Sbjct 1418 VTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVETT 1477 Query 658 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLRE 717 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTT +P+EFHLDGEVLPLDKLKS LSLRE Sbjct 1478 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTENPVEFHLDGEVLPLDKLKSFLSLRE 1537 Query 718 VKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSD 777 VKTIKVFTTVDNTNLHT IVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSD Sbjct 1538 VKTIKVFTTVDNTNLHTQIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSD 1597 Query 778 DTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQ 837 DTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQ Sbjct 1598 DTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLALQ 1657 Query 838 QVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESA 897 Q EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESA Sbjct 1658 QSEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESA 1717 Query 898 KRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSF 957 KRVLNVVCK+CGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSF Sbjct 1718 KRVLNVVCKYCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESSF 1777 Query 958 VMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPVT 1017 VMMSAPPAEYKLQQGAFLCANEYTG+YQCGHYTHITAKETLYR+DGAHLTKMSEYKGPVT Sbjct 1778 VMMSAPPAEYKLQQGAFLCANEYTGDYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVT 1837 Query 1018 DVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNAS 1077 DVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNAS Sbjct 1838 DVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNAS 1897 Query 1078 FDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGAK 1137 FDNFKLTCSNTKFADDLNQMTGFKKPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGAK Sbjct 1898 FDNFKLTCSNTKFADDLNQMTGFKKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGAK 1957 Query 1138 LVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACESQ 1197 L+HKPI+WHINQTTNKTTYKPN WCLRCLWS KPVDTSNSFE L VEDTQGMDNLACESQ Sbjct 1958 LLHKPIIWHINQTTNKTTYKPNTWCLRCLWSIKPVDTSNSFEALAVEDTQGMDNLACESQ 2017 Query 1198 TTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETS 1257 T TSEEVVE+PTVQKE+IECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETS Sbjct 2018 TPTSEEVVESPTVQKEVIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEETS 2077 Query 1258 ITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQRV 1317 ITIKKPNELS+ALGLKTLATHGAAAINSVPW KILAYVKPFLGQ AV T+NCIK+CVQRV Sbjct 2078 ITIKKPNELSIALGLKTLATHGAAAINSVPWGKILAYVKPFLGQVAVTTTNCIKRCVQRV 2137 Query 1318 FSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKFS 1377 F+NYMPYVITLLFQLCTFT+STNSRI+ASLPTTIAKNSVKSVAKLCLDVC+NYVKSPKFS Sbjct 2138 FNNYMPYVITLLFQLCTFTRSTNSRIRASLPTTIAKNSVKSVAKLCLDVCVNYVKSPKFS 2197 Query 1378 KLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQG 1437 KLFTI MWLLLLSICLGSL YVTA GV LS+LG+PSYC+G+R+LY+NSSNVT+MDFC+G Sbjct 2198 KLFTIAMWLLLLSICLGSLVYVTAAFGVLLSNLGMPSYCNGIRDLYVNSSNVTSMDFCEG 2257 Query 1438 YFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGLS 1497 FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLGLS Sbjct 2258 SFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTLLGLAAEWFLAYMLFTKFFYLLGLS 2317 Query 1498 AIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDGC 1557 AIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMY+FFA FYYVWKSYVHIMDGC Sbjct 2318 AIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYLFFAFFYYVWKSYVHIMDGC 2377 Query 1558 TSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTF 1617 TSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTF Sbjct 2378 TSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGSTF 2437 Query 1618 ISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVNL 1677 ISDEVARDLSLQFKRPINPTDQS+YVVDSV VKN AL+LYFDKAGQKTYERH LSHFVNL Sbjct 2438 ISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNSALYLYFDKAGQKTYERHTLSHFVNL 2497 Query 1678 DNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDST 1737 DNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQAL+SDVGDST Sbjct 2498 DNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALISDVGDST 2557 Query 1738 EVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDT 1797 EVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGV LDGVLSTFVSAARQGVVDT Sbjct 2558 EVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVVLDGVLSTFVSAARQGVVDT 2617 Query 1798 DVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVA 1857 DVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVA Sbjct 2618 DVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVA 2677 Query 1858 KSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 KSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVN ITTKISLKGG Sbjct 2678 KSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNAITTKISLKGG 2736 >MAG: ORF1a protein [Severe acute respiratory syndrome-related coronavirus] Sequence ID: WCZ55812.1 Length: 4373 Range 1: 819 to 2731 Score:3657 bits(9483), Expect:0.0, Method:Compositional matrix adjust., Identities:1769/1920(92%), Positives:1836/1920(95%), Gaps:11/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVE GTEVTE ACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVEYGTEVTELACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPD+EEDCEE E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDDEEDCEEYE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 +EE + CEHEYGTEDDYKG PLEFGASTE HV+E EEE DWL+ + PE Sbjct 939 EEEEIPEQACEHEYGTEDDYKGFPLEFGASTEIQHVDEGEEE-DWLEPEPKPLPEEP--- 994 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 VNQF GYLKLTDNVAIKC+DIVKEAQSAKP VIVNAAN HLKHGGGVAGALNKATNG Sbjct 995 ---VNQFTGYLKLTDNVAIKCVDIVKEAQSAKPMVIVNAANIHLKHGGGVAGALNKATNG 1051 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESDEYI+QNGPLTVGGSCLLSGHNLA+KC+HVVGPNLNAGEDVQLLK AYENFNSQ Sbjct 1052 AMQQESDEYIKQNGPLTVGGSCLLSGHNLAKKCMHVVGPNLNAGEDVQLLKAAYENFNSQ 1111 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKP QSLKMCVE V TQVY+AVNDKSLYDQ+VLDYLDSLKPKVESP Sbjct 1112 DVLLAPLLSAGIFGAKPFQSLKMCVETVHTQVYIAVNDKSLYDQVVLDYLDSLKPKVESP 1171 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 ++EEPKLEEPK QPVAEK DVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKL Sbjct 1172 KQKEEPKLEEPKVDQPVAEKSADVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLC 1231 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEK+APYIVGDVITSGDITC IIPAKK+GGTTEMLA+AL++VPV+E Sbjct 1232 QDSQNMLRGEDMSFLEKNAPYIVGDVITSGDITCAIIPAKKAGGTTEMLAKALRKVPVSE 1291 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSE PNE+EE+LGTVSWNLREMLAHAEE Sbjct 1292 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSEIPNEREEILGTVSWNLREMLAHAEE 1351 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMP+C+DV+AIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1352 TRKLMPVCMDVKAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1411 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKTPEE+F+ET Sbjct 1412 LVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTPEEHFIET 1471 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 TSLAG+YRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKS+LSLR Sbjct 1472 TSLAGTYRDWSYSGQRTELGVEFLKRGDKIVYHTIESPVEFHLDGEVLPLDKLKSILSLR 1531 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDN NLHT IVDMSMTYGQQFGPTYLDGADVTKIKPH HEGKTFFVLPS Sbjct 1532 EVKTIKVFTTVDNINLHTQIVDMSMTYGQQFGPTYLDGADVTKIKPHAKHEGKTFFVLPS 1591 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQ+GGLTSIKWADNNCYLSSVLLAL Sbjct 1592 DDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQIGGLTSIKWADNNCYLSSVLLAL 1651 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSN+TVGELGDVRETMTHLLQHANLES Sbjct 1652 QQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNRTVGELGDVRETMTHLLQHANLES 1711 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCK CGQK+TTL GVEAVMYMGTLSY+ELKTGV+IPC+CGR+ATQYLVQQESS Sbjct 1712 AKRVLNVVCKTCGQKSTTLTGVEAVMYMGTLSYEELKTGVTIPCICGRDATQYLVQQESS 1771 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPP+EY LQQGAFLCANEYTG+YQCGHYTH+T KETLYR+DGAHLTKMSEYKGPV Sbjct 1772 FVMMSAPPSEYTLQQGAFLCANEYTGSYQCGHYTHVTVKETLYRIDGAHLTKMSEYKGPV 1831 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGV YTEI+PKLDGYYKK NAYYTEQPIDLVP QP+PNA Sbjct 1832 TDVFYKETSYTTTIKPVSYKLDGVIYTEIQPKLDGYYKKDNAYYTEQPIDLVPNQPLPNA 1891 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1892 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGA 1951 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQTTNKTTYKPN WCLRCLWSTKPVDTSNSFE L VEDTQGMDNLACES Sbjct 1952 KLLHKPIIWHINQTTNKTTYKPNTWCLRCLWSTKPVDTSNSFEALAVEDTQGMDNLACES 2011 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QT TSEEVVENPTVQKE+IECDVKTTEVVGNVILKPSEEGVKVTQELGHEDL+AAYVEET Sbjct 2012 QTPTSEEVVENPTVQKEVIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLIAAYVEET 2071 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQ AV T+NCIK+CVQR Sbjct 2072 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQAAVTTTNCIKRCVQR 2131 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 F+NYMPYVITLLFQLCTFT+STNSRI+ASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2132 AFNNYMPYVITLLFQLCTFTRSTNSRIRASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2191 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSL YVTA GV LS+LG+ SYC+G+R+LY+NSSNVT+MDFC+ Sbjct 2192 SKLFTIAMWLLLLSICLGSLVYVTAAFGVLLSNLGMHSYCNGIRDLYVNSSNVTSMDFCE 2251 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLGL Sbjct 2252 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTLLGLAAEWFLAYMLFTKFFYLLGL 2311 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFA FYYVWK YVHIMDG Sbjct 2312 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFAFFYYVWKGYVHIMDG 2371 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST Sbjct 2372 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 2431 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERH LSHFVN Sbjct 2432 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHTLSHFVN 2491 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQ LVSDVGDS Sbjct 2492 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQVLVSDVGDS 2551 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2552 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2611 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2612 TDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2671 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVN ITTKISLKGG Sbjct 2672 AKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNAITTKISLKGG 2731 >ORF1a protein [Bat coronavirus Rp/Shaanxi2011] Sequence ID: AGC74164.1 Length: 4374 Range 1: 819 to 2732 Score:3655 bits(9479), Expect:0.0, Method:Compositional matrix adjust., Identities:1789/1920(93%), Positives:1850/1920(96%), Gaps:10/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEE+CEE E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEECEEYE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 +EE +TCEHEYGTEDDYKGLPLEFGAST+ + +EE+ D EAEPEPE L Sbjct 939 EEEEVPEQTCEHEYGTEDDYKGLPLEFGASTQ------QVDEEEEEDWLDEAEPEPESLS 992 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQF GYLKLTDNVAIKC+DIVKEAQSA+P VIVNAAN HLKHGGGVAGALNKATNG Sbjct 993 EEPVNQFTGYLKLTDNVAIKCVDIVKEAQSARPEVIVNAANIHLKHGGGVAGALNKATNG 1052 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESD+YI+QNGPLTVGGSCLLSGHNLA+KC+HVVGPNLNAGEDVQLLK AYENFNSQ Sbjct 1053 AMQQESDDYIKQNGPLTVGGSCLLSGHNLAKKCMHVVGPNLNAGEDVQLLKAAYENFNSQ 1112 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLK+CVE+V TQVY+AVNDKSLYDQ+VLDYLDSLKPKVESP Sbjct 1113 DVLLAPLLSAGIFGAKPLQSLKVCVEVVHTQVYIAVNDKSLYDQVVLDYLDSLKPKVESP 1172 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 KEE PKLEEPK QP EKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1173 KKEENPKLEEPKMEQPAVEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1232 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGED SFLEKDAPYIVGDVITSGDITC IIPAKK+GGTTEMLA+ALK+VPV E Sbjct 1233 QDSQNMLRGEDTSFLEKDAPYIVGDVITSGDITCAIIPAKKAGGTTEMLAKALKKVPVGE 1292 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTL+EAKTALKKCKSAFYVLPSETPNEKEE+LGTVSWNLREMLAHAEE Sbjct 1293 YITTYPGQGCAGYTLDEAKTALKKCKSAFYVLPSETPNEKEEILGTVSWNLREMLAHAEE 1352 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMP+C+DVRAIMATIQRKYKGIK+QEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1353 TRKLMPVCMDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1412 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKTPEE+F+ET Sbjct 1413 LVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTPEEHFIET 1472 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAG+YRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSLLSLR Sbjct 1473 ISLAGTYRDWSYSGQRTELGVEFLKRGDKIVYHTIESPVEFHLDGEVLPLDKLKSLLSLR 1532 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHT IVDMSMTYGQQFG TYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1533 EVKTIKVFTTVDNTNLHTQIVDMSMTYGQQFGSTYLDGADVTKIKPHVNHEGKTFFVLPS 1592 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHT+DESFLGRYMSAL+HTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1593 DDTLRSEAFEYYHTLDESFLGRYMSALSHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1652 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQ+EVKFNAPALQEAYYRARAGDAANFCALILAYS KTVGELGDVRETMTHLLQHANLES Sbjct 1653 QQIEVKFNAPALQEAYYRARAGDAANFCALILAYSYKTVGELGDVRETMTHLLQHANLES 1712 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1713 AKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1772 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGPV Sbjct 1773 FVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV 1832 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1833 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1892 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTC+NTKFADDLNQMTGFKKPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1893 SFDNFKLTCANTKFADDLNQMTGFKKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGA 1952 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQTTNKTTYKPN WCLRCLWSTKPV+TSN FEVL VE TQGMDNLACES Sbjct 1953 KLLHKPIIWHINQTTNKTTYKPNTWCLRCLWSTKPVETSNLFEVLEVEGTQGMDNLACES 2012 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 Q+ SEEVVENPTVQKE+IECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVE T Sbjct 2013 QSPISEEVVENPTVQKEVIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVENT 2072 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQ AV TSNC+KKCVQR Sbjct 2073 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQAAVTTSNCMKKCVQR 2132 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 +F+NYMPYVITLLFQLCTFTKSTNSRI+ASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2133 IFNNYMPYVITLLFQLCTFTKSTNSRIRASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2192 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSL YVTA GV LS+LG+PSYCDGVRE Y+NSSNVT +DFC+ Sbjct 2193 SKLFTIAMWLLLLSICLGSLIYVTAAFGVLLSNLGIPSYCDGVRESYLNSSNVTIIDFCE 2252 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCL+GLDSLD YPALETIQVTISSYKLDLTFLGLAAEW LAYMLFTKFFYLLGL Sbjct 2253 GSFPCSVCLNGLDSLDFYPALETIQVTISSYKLDLTFLGLAAEWFLAYMLFTKFFYLLGL 2312 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWF+ISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG Sbjct 2313 SAIMQVFFGYFASHFISNSWLMWFVISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 2372 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST Sbjct 2373 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 2432 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQ+TYERHPLSHFVN Sbjct 2433 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQRTYERHPLSHFVN 2492 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2493 LDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2552 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2553 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2612 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2613 TDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2672 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHN+SL+WNVKDYMSLSEQLRKQIRSAA+KNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2673 AKSHNISLIWNVKDYMSLSEQLRKQIRSAARKNNIPFRLTCATTRQVVNVITTKISLKGG 2732 >MAG: ORF1a protein [Severe acute respiratory syndrome-related coronavirus] Sequence ID: WCZ55819.1 Length: 4373 Range 1: 819 to 2731 Score:3655 bits(9477), Expect:0.0, Method:Compositional matrix adjust., Identities:1768/1920(92%), Positives:1836/1920(95%), Gaps:11/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVE GTEVTE ACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVEYGTEVTELACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPD+EEDCEE E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDDEEDCEEYE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 +EE + CEHEYGTEDDYKG PLEFGASTE HV+E EEE DWL+ + PE Sbjct 939 EEEEIPEQACEHEYGTEDDYKGFPLEFGASTEIQHVDEGEEE-DWLEPEPKPLPEEP--- 994 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 VNQF GYLKLTDNVAIKC+DIVKEAQSAKP VIVNAAN HLKHGGGVAGALNKATNG Sbjct 995 ---VNQFTGYLKLTDNVAIKCVDIVKEAQSAKPMVIVNAANIHLKHGGGVAGALNKATNG 1051 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESDEYI+QNGPLTVGGSCLLSGHNLA+KC+HVVGPNLNAGEDVQLLK AYENFNSQ Sbjct 1052 AMQQESDEYIKQNGPLTVGGSCLLSGHNLAKKCMHVVGPNLNAGEDVQLLKAAYENFNSQ 1111 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKP QSLKMCVE V TQVY+AVNDKSLYDQ+VLDYLDSLKPKVESP Sbjct 1112 DVLLAPLLSAGIFGAKPFQSLKMCVETVHTQVYIAVNDKSLYDQVVLDYLDSLKPKVESP 1171 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 ++EEPKLEEPK QPVAEK DVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKL Sbjct 1172 KQKEEPKLEEPKVDQPVAEKSADVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLC 1231 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEK+APYIVGDVITSGDITC IIPAKK+GGTTEMLA+AL++VPV+E Sbjct 1232 QDSQNMLRGEDMSFLEKNAPYIVGDVITSGDITCAIIPAKKAGGTTEMLAKALRKVPVSE 1291 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSE PNE+EE+LGTVSWNLREMLAHAEE Sbjct 1292 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSEIPNEREEILGTVSWNLREMLAHAEE 1351 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMP+C+DV+AIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1352 TRKLMPVCMDVKAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1411 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKTPEE+F+ET Sbjct 1412 LVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTPEEHFIET 1471 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 TSLAG+YRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKS+LSLR Sbjct 1472 TSLAGTYRDWSYSGQRTELGVEFLKRGDKIVYHTIESPVEFHLDGEVLPLDKLKSILSLR 1531 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDN NLHT IVDMSMTYGQQFGPTYLDGADVTKIKPH HEGKTFFVLPS Sbjct 1532 EVKTIKVFTTVDNINLHTQIVDMSMTYGQQFGPTYLDGADVTKIKPHAKHEGKTFFVLPS 1591 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQ+GGLTSIKWADNNCYLSSVLLAL Sbjct 1592 DDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQIGGLTSIKWADNNCYLSSVLLAL 1651 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSN+TVGELGDVRETMTHLLQHANLES Sbjct 1652 QQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNRTVGELGDVRETMTHLLQHANLES 1711 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCK CGQK+TTL GVEAVMYMGTLSY+ELKTGV+IPC+CGR+ATQYLVQQESS Sbjct 1712 AKRVLNVVCKTCGQKSTTLTGVEAVMYMGTLSYEELKTGVTIPCICGRDATQYLVQQESS 1771 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPP+EY LQQGAFLCANEYTG+YQCGHYTH+T KETLYR+DGAHLTKMSEYKGPV Sbjct 1772 FVMMSAPPSEYTLQQGAFLCANEYTGSYQCGHYTHVTVKETLYRIDGAHLTKMSEYKGPV 1831 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGV YTEI+PKLDGYYKK NAYYTEQPIDLVP QP+PNA Sbjct 1832 TDVFYKETSYTTTIKPVSYKLDGVIYTEIQPKLDGYYKKDNAYYTEQPIDLVPNQPLPNA 1891 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1892 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGA 1951 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQTTNKTTYKPN WCLRCLWSTKPVDTSNSFE L VEDTQGMDNLACES Sbjct 1952 KLLHKPIIWHINQTTNKTTYKPNTWCLRCLWSTKPVDTSNSFEALAVEDTQGMDNLACES 2011 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QT TSEEVVENPTVQKE+IECDVKTTEVVGNVILKPSEEGVKVTQELGHEDL+AAYVEET Sbjct 2012 QTPTSEEVVENPTVQKEVIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLIAAYVEET 2071 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQ AV T+NCIK+CVQR Sbjct 2072 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQAAVTTTNCIKRCVQR 2131 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 F+NYMPYVITLLFQLCTFT+STNSRI+ASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2132 AFNNYMPYVITLLFQLCTFTRSTNSRIRASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2191 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSL YVTA GV LS+LG+ SYC+G+R+LY+NSSNVT+MDFC+ Sbjct 2192 SKLFTIAMWLLLLSICLGSLVYVTAAFGVLLSNLGMHSYCNGIRDLYVNSSNVTSMDFCE 2251 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLGL Sbjct 2252 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTLLGLAAEWFLAYMLFTKFFYLLGL 2311 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFA FYYVWK YVHIMDG Sbjct 2312 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFAFFYYVWKGYVHIMDG 2371 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST Sbjct 2372 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 2431 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERH LSHFVN Sbjct 2432 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHTLSHFVN 2491 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQ LVSDVGDS Sbjct 2492 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQVLVSDVGDS 2551 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSEL+KGVALDGVLSTFVSAARQGVVD Sbjct 2552 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELSKGVALDGVLSTFVSAARQGVVD 2611 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2612 TDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2671 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVN ITTKISLKGG Sbjct 2672 AKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNAITTKISLKGG 2731 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47444.1 Length: 7070 Range 1: 819 to 2737 Score:3655 bits(9477), Expect:0.0, Method:Compositional matrix adjust., Identities:1809/1920(94%), Positives:1857/1920(96%), Gaps:5/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKC+VYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCAVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEW VATFYLFDDAGEEKLSSRMYCSFYPPD+EEDCEE Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWGVATFYLFDDAGEEKLSSRMYCSFYPPDDEEDCEEYG 938 Query 121 DEEETCE----HEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 +EEE E HEYGTEDDYKGLPLEFGASTE V+EEEEE+ LDDA+EAEPEPEPL Sbjct 939 EEEEIPEETCEHEYGTEDDYKGLPLEFGASTEIQQVDEEEEEDW-LDDAVEAEPEPEPLS 997 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQF GYLKLTDNVAIKC+DIVKEAQSAKPTVIVNAAN HLKHGGGVAGALN+ATNG Sbjct 998 EEPVNQFTGYLKLTDNVAIKCVDIVKEAQSAKPTVIVNAANIHLKHGGGVAGALNRATNG 1057 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESD+YI+QNGPLTVGGSCLLSGHNLA+KC+HVVGPNLNAGEDVQLLK AYENFNSQ Sbjct 1058 AMQQESDDYIKQNGPLTVGGSCLLSGHNLAKKCMHVVGPNLNAGEDVQLLKAAYENFNSQ 1117 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE V QVY+AVND+SLYDQ+VLDYLDSLKPKVE Sbjct 1118 DVLLAPLLSAGIFGAKPLQSLKMCVETVHAQVYIAVNDRSLYDQVVLDYLDSLKPKVEPS 1177 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 ++EEPKLE+PK Q VAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1178 KQKEEPKLEDPKMDQSVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1237 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLA+ALK+VP+ E Sbjct 1238 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLAKALKKVPIDE 1297 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEE+LGTVSWNLREMLAHAEE Sbjct 1298 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEILGTVSWNLREMLAHAEE 1357 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPIC+DVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1358 TRKLMPICMDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1417 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKTPEE+FVET Sbjct 1418 LVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTPEEHFVET 1477 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSY GQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSLLSLR Sbjct 1478 VSLAGSYRDWSYLGQRTELGVEFLKRGDKIVYHTMESPVEFHLDGEVLPLDKLKSLLSLR 1537 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHT IVDMSMTYGQQFGPTYLDGADVTKIKPH NHEGKTFFVLPS Sbjct 1538 EVKTIKVFTTVDNTNLHTQIVDMSMTYGQQFGPTYLDGADVTKIKPHANHEGKTFFVLPS 1597 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1598 DDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1657 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1658 QQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1717 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS Sbjct 1718 AKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 1777 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGPV Sbjct 1778 FVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV 1837 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1838 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1897 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1898 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGA 1957 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQTTNKTTYKPN+WCLRCLWSTKPV TSNSFEVL VEDTQGMDNLACES Sbjct 1958 KLLHKPIIWHINQTTNKTTYKPNMWCLRCLWSTKPVGTSNSFEVLAVEDTQGMDNLACES 2017 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QT TSEEVVENPTVQKE+IECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET Sbjct 2018 QTPTSEEVVENPTVQKEVIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 2077 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 S TIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQ AV TSNCIKKCVQR Sbjct 2078 SFTIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQAAVTTSNCIKKCVQR 2137 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLC FTK TN RI+ASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2138 VFNNYMPYVITLLFQLCAFTKGTNLRIRASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2197 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSL YVTA GV LS+LG+PSYCDGVR+LY+NSSNVT+MDFC+ Sbjct 2198 SKLFTIAMWLLLLSICLGSLIYVTAAFGVLLSNLGIPSYCDGVRDLYVNSSNVTSMDFCE 2257 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEW LAYMLFTKFFYLLGL Sbjct 2258 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWFLAYMLFTKFFYLLGL 2317 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG Sbjct 2318 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 2377 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST Sbjct 2378 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 2437 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2438 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2497 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2498 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2557 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLK LVATAHSELAKGVALDGVLSTF+SAARQGVVD Sbjct 2558 TEVSVKMFDAYVDTFSATFSVPMEKLKTLVATAHSELAKGVALDGVLSTFISAARQGVVD 2617 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2618 TDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2677 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2678 AKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2737 >orf1ab polyprotein [Jingmen Rhinolophus sinicus betacoronavirus 1] Sequence ID: UBB42404.1 Length: 7070 Range 1: 819 to 2737 Score:3646 bits(9455), Expect:0.0, Method:Compositional matrix adjust., Identities:1799/1920(94%), Positives:1859/1920(96%), Gaps:5/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 +VVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSS MYCSFYPPDEEEDCEE E Sbjct 879 SVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSHMYCSFYPPDEEEDCEEYE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEE+ TCEHEYGTEDDYKGLPLEFGASTE V+EEEEE+ L++AI AEPEPEPLP Sbjct 939 DEEDIPEETCEHEYGTEDDYKGLPLEFGASTEIQQVDEEEEEDW-LEEAIAAEPEPEPLP 997 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQF GYLKLTDNVAIKC+DIVKEAQ+AKPTVIVNAAN HLKHGGGVAG LNKATNG Sbjct 998 EEPVNQFTGYLKLTDNVAIKCVDIVKEAQNAKPTVIVNAANVHLKHGGGVAGVLNKATNG 1057 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ E D YI+QNGPLTVGGSCLLSGHNLA+KC+HVVGPNLNAGEDVQLLK AYENFNSQ Sbjct 1058 AMQQECDGYIKQNGPLTVGGSCLLSGHNLAKKCMHVVGPNLNAGEDVQLLKAAYENFNSQ 1117 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLY+Q+VLDYLDSLKPKVESP Sbjct 1118 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYEQVVLDYLDSLKPKVESP 1177 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 K+E+PKLEEPK QP+ +KPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1178 EKQEDPKLEEPKVEQPIVQKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1237 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITC IIPAKK+GGTTEMLA+ALK VP E Sbjct 1238 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCAIIPAKKAGGTTEMLAKALKNVPTGE 1297 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEE+LGTVSWNLREMLAHAEE Sbjct 1298 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEILGTVSWNLREMLAHAEE 1357 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMP+C+DVRAIMATIQRKYKGIK+QEGIVDYGVRFFFYTSKEPVASIITKLN+LNEP Sbjct 1358 TRKLMPVCMDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNALNEP 1417 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHG NLEEAARCMRSL+APAVVSVSSPDAVT YNGYLTS+SKTPEE+FVET Sbjct 1418 LVTMPIGYVTHGFNLEEAARCMRSLRAPAVVSVSSPDAVTTYNGYLTSASKTPEEHFVET 1477 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT +P+EFHLDG+VLPLDKLKSLLSLR Sbjct 1478 VSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTMENPVEFHLDGDVLPLDKLKSLLSLR 1537 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHT IVDMSMTYGQQFGPTYLDGADVTKIKPH NHEGKTFFVLPS Sbjct 1538 EVKTIKVFTTVDNTNLHTQIVDMSMTYGQQFGPTYLDGADVTKIKPHFNHEGKTFFVLPS 1597 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1598 DDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1657 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES Sbjct 1658 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 1717 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD+LKTGVSIPCVCGR+ATQYLVQQESS Sbjct 1718 AKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDDLKTGVSIPCVCGRSATQYLVQQESS 1777 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGPV Sbjct 1778 FVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV 1837 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1838 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1897 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1898 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGA 1957 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQTTNKTTYKPN WCLRCLWSTKPVDTSNSFE L VEDTQGMDNLACES Sbjct 1958 KLLHKPIIWHINQTTNKTTYKPNTWCLRCLWSTKPVDTSNSFEALAVEDTQGMDNLACES 2017 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 T TSEEVVENPTVQKE+IECDVKTTEVVGNVILKPSE+GVKVTQELGHEDLMAAYVEET Sbjct 2018 LTPTSEEVVENPTVQKEVIECDVKTTEVVGNVILKPSEKGVKVTQELGHEDLMAAYVEET 2077 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQ AV T+NCIK+CVQR Sbjct 2078 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQVAVTTTNCIKRCVQR 2137 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFT+STNSRI+ASLPTTIAKNSVKSVAKLC+DVCINYVKSPKF Sbjct 2138 VFNNYMPYVITLLFQLCTFTRSTNSRIRASLPTTIAKNSVKSVAKLCVDVCINYVKSPKF 2197 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSL YVTA GV LS+LG+PS+C GVRE Y+NSSNVTTMDFC+ Sbjct 2198 SKLFTIAMWLLLLSICLGSLIYVTAAFGVLLSNLGIPSHCGGVRESYLNSSNVTTMDFCE 2257 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCL+GLDSLD+YPALETIQVTISSYKLDLTFLGLAAEW+LAYMLFTKFFYLLGL Sbjct 2258 GSFPCSVCLNGLDSLDTYPALETIQVTISSYKLDLTFLGLAAEWVLAYMLFTKFFYLLGL 2317 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2318 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2377 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST Sbjct 2378 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 2437 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2438 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2497 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2498 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2557 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLK LVATAHSELAKGVALDGVLSTFVSAARQGVV Sbjct 2558 TEVSVKMFDAYVDTFSATFSVPMEKLKTLVATAHSELAKGVALDGVLSTFVSAARQGVVY 2617 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2618 TDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2677 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKN+IPFRLTCATTRQVVNVITTKISLKGG Sbjct 2678 AKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNSIPFRLTCATTRQVVNVITTKISLKGG 2737 >ORF1a polyprotein [Horseshoe bat sarbecovirus] Sequence ID: WMT59408.1 Length: 4377 >ORF1a polyprotein [Horseshoe bat sarbecovirus] Sequence ID: WMT59440.1 Length: 4377 Range 1: 819 to 2735 Score:3632 bits(9417), Expect:0.0, Method:Compositional matrix adjust., Identities:1770/1921(92%), Positives:1838/1921(95%), Gaps:9/1921(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP KGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APTKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEE E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEEYE 938 Query 121 DEEETCE----HEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 +EEE E HEYGTE+DYKGLPLEFGAST+ HVEEEEEE DWL E EPEPE Sbjct 939 EEEEVSEETCEHEYGTEEDYKGLPLEFGASTDITHVEEEEEE-DWLG---ETEPEPELTS 994 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQF GYLKLTDNVAIKC+DIVKEAQSA P VIVNAAN HLKHGGGVAGALNKATNG Sbjct 995 EEPVNQFTGYLKLTDNVAIKCVDIVKEAQSANPMVIVNAANVHLKHGGGVAGALNKATNG 1054 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESD+YI+ NGPLTVGGSCLLSGHNLA+KCLHVVGPNLNAGEDVQLLK AYENFNSQ Sbjct 1055 AMQKESDDYIKLNGPLTVGGSCLLSGHNLAKKCLHVVGPNLNAGEDVQLLKAAYENFNSQ 1114 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 D+LLAPLLSAGIFGAKPLQSL+MCV+IVRTQVY+AVNDK+LY+Q+V+DYLDSL+P+V +P Sbjct 1115 DILLAPLLSAGIFGAKPLQSLQMCVQIVRTQVYIAVNDKALYEQVVMDYLDSLEPRVGAP 1174 Query 357 NKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKL 415 +EE P+ E+PK + V +K VDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKL Sbjct 1175 KQEELPETEDPKVEEKSVVQKTVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKL 1234 Query 416 YQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVA 475 YQDSQNMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+VPV Sbjct 1235 YQDSQNMLRGEDMSFLEKDAPYVVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKVPVD 1294 Query 476 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAE 535 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPN KEE+LGTVSWNLREMLAHAE Sbjct 1295 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNAKEEILGTVSWNLREMLAHAE 1354 Query 536 ETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNE 595 ETRKLMPIC+DVRAIMATIQRKYKGIK+QEGIVDYGVRFFFYTSKEPVASIITKLNSLNE Sbjct 1355 ETRKLMPICVDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNSLNE 1414 Query 596 PLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVE 655 PLVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKT EE+FVE Sbjct 1415 PLVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEHFVE 1474 Query 656 TTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSL 715 T SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SPIEFHLDGEVLPLDKLKSLLSL Sbjct 1475 TVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPIEFHLDGEVLPLDKLKSLLSL 1534 Query 716 REVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLP 775 REVKTIKVFTTVDNTNLHT +VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLP Sbjct 1535 REVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLP 1594 Query 776 SDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA 835 SDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA Sbjct 1595 SDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA 1654 Query 836 LQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE 895 LQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE Sbjct 1655 LQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE 1714 Query 896 SAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQES 955 SA+RVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQQES Sbjct 1715 SARRVLNVVCKHCGQKTTTLMGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQES 1774 Query 956 SFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGP 1015 SFVMMSAPPAEY LQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGP Sbjct 1775 SFVMMSAPPAEYTLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGP 1834 Query 1016 VTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPN 1075 VTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PN Sbjct 1835 VTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPN 1894 Query 1076 ASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKG 1135 ASFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SFKKG Sbjct 1895 ASFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKG 1954 Query 1136 AKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACE 1195 AKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNLACE Sbjct 1955 AKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNLACE 2014 Query 1196 SQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEE 1255 SQ TSEEVVENPT+QKE+IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAYVE Sbjct 2015 SQQLTSEEVVENPTIQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAYVEN 2074 Query 1256 TSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQ 1315 TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYV+PFLG+ A+ TSNC K+ VQ Sbjct 2075 TSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVRPFLGRAAITTSNCAKRLVQ 2134 Query 1316 RVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPK 1375 RVF+NYMPYV+TLLFQLCTFT+STNSRI+ASLPTTIAKNSVK VA+LCLD INYVKSPK Sbjct 2135 RVFNNYMPYVLTLLFQLCTFTRSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYVKSPK 2194 Query 1376 FSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFC 1435 FSKLFTI MWLLLLSICLGSL YVTA LGV LS+ G PSYC GVRELY+NSSNVTTMDFC Sbjct 2195 FSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNFGAPSYCSGVRELYLNSSNVTTMDFC 2254 Query 1436 QGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLG 1495 +G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLG Sbjct 2255 EGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWFLAYMLFTKFFYLLG 2314 Query 1496 LSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMD 1555 LSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMD Sbjct 2315 LSAIMQLFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMD 2374 Query 1556 GCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGS 1615 GCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGS Sbjct 2375 GCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGS 2434 Query 1616 TFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFV 1675 TFISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFV Sbjct 2435 TFISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFV 2494 Query 1676 NLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGD 1735 NLDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGD Sbjct 2495 NLDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGD 2554 Query 1736 STEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVV 1795 STEVSVKMFDAY+DTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVV Sbjct 2555 STEVSVKMFDAYIDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVV 2614 Query 1796 DTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ 1855 DTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ Sbjct 2615 DTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ 2674 Query 1856 VAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG 1915 VAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG Sbjct 2675 VAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG 2734 Query 1916 G 1916 G Sbjct 2735 G 2735 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47434.1 Length: 7067 Range 1: 819 to 2734 Score:3631 bits(9415), Expect:0.0, Method:Compositional matrix adjust., Identities:1796/1921(93%), Positives:1853/1921(96%), Gaps:10/1921(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEW VATFYLFDDAGEEKLSS MYCSFYPPD+EEDCEE E Sbjct 879 AVVKTLQPVSDLLTSMGIDLDEWGVATFYLFDDAGEEKLSSHMYCSFYPPDDEEDCEEYE 938 Query 121 DEE----ETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 +EE + CEHEYGTEDDYKG PLEFGASTE HV+EEEEE+ EAEPE EPLP Sbjct 939 EEEEIPEQACEHEYGTEDDYKGFPLEFGASTEMQHVDEEEEEDW----LEEAEPEKEPLP 994 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQF GYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAAN HLKHGGGVAGALNKATNG Sbjct 995 EEPVNQFTGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANIHLKHGGGVAGALNKATNG 1054 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ Sbjct 1055 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 1114 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE VRTQVYLAVNDKSLYDQI+LDYLDSLK KVES Sbjct 1115 DVLLAPLLSAGIFGAKPLQSLKMCVETVRTQVYLAVNDKSLYDQIILDYLDSLKSKVES- 1173 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 +K+EEPKLEEPK VQPV E+ VDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1174 SKKEEPKLEEPKEVQPVVERHVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1233 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDV+TSGDITCVIIPAKK+GGTTEMLARALK+VP AE Sbjct 1234 QDSQNMLRGEDMSFLEKDAPYIVGDVVTSGDITCVIIPAKKAGGTTEMLARALKKVPAAE 1293 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE Sbjct 1294 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 1353 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLN+LN+P Sbjct 1354 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNALNQP 1413 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEE+FVET Sbjct 1414 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEHFVET 1473 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTT +P+EFHLDGEVLPLDKLKS LSLR Sbjct 1474 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTENPVEFHLDGEVLPLDKLKSFLSLR 1533 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHT IVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS Sbjct 1534 EVKTIKVFTTVDNTNLHTQIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 1593 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1594 DDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1653 Query 837 QQVEVKFNAPALQEAYYRARAGDAANF-CALILAYSNKTVGELGDVRETMTHLLQHANLE 895 QQ+EVKFNAPALQEAYYRARAGDA F CALIL YSN+TVGELGDVRETMTHLLQHANLE Sbjct 1654 QQIEVKFNAPALQEAYYRARAGDAGQFFCALILTYSNRTVGELGDVRETMTHLLQHANLE 1713 Query 896 SAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQES 955 SAKRVLNVVCK CGQK+TTL GVEAVMYMGTLSY+ELKTGV+IPC+CGR+ATQYLVQQES Sbjct 1714 SAKRVLNVVCKTCGQKSTTLIGVEAVMYMGTLSYEELKTGVTIPCICGRDATQYLVQQES 1773 Query 956 SFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGP 1015 SFVMMSAPP+EY LQQGAFLCANEYTG+YQCGHYTH+TAKETLYR+DGAHLTKMSEYKGP Sbjct 1774 SFVMMSAPPSEYTLQQGAFLCANEYTGSYQCGHYTHVTAKETLYRIDGAHLTKMSEYKGP 1833 Query 1016 VTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPN 1075 VTDVFYKETSYTT IKPVSYKLDGV YTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PN Sbjct 1834 VTDVFYKETSYTTTIKPVSYKLDGVIYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPN 1893 Query 1076 ASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKG 1135 ASFDNFKLTCSN KFADDLNQMTGFKKPASREL+VTFFPDLNGDVVAIDYRHYS SFKKG Sbjct 1894 ASFDNFKLTCSNIKFADDLNQMTGFKKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKG 1953 Query 1136 AKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACE 1195 AKL+HKPI+WHINQTTNKTTYKPN WCLRCLWS KPVDTSNSFE L VEDTQGMDNLACE Sbjct 1954 AKLLHKPIIWHINQTTNKTTYKPNTWCLRCLWSIKPVDTSNSFEALAVEDTQGMDNLACE 2013 Query 1196 SQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEE 1255 SQT TSE VVENPTVQKE+IECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEE Sbjct 2014 SQTPTSEGVVENPTVQKEVIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEE 2073 Query 1256 TSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQ 1315 TSITIKKPNELS+ALGLKTLATHGAAAINSVPWSKILAYVKPFLGQ AV T+NCIK+CVQ Sbjct 2074 TSITIKKPNELSIALGLKTLATHGAAAINSVPWSKILAYVKPFLGQVAVTTTNCIKRCVQ 2133 Query 1316 RVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPK 1375 RVF+NYMPYVITLLFQLCTFT+STNSRI+ASLPTTIAKNSVKSVAKLCLDVC+NYVKSPK Sbjct 2134 RVFNNYMPYVITLLFQLCTFTRSTNSRIRASLPTTIAKNSVKSVAKLCLDVCVNYVKSPK 2193 Query 1376 FSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFC 1435 FSKLFTI MWLLLLSICLGSL YVTA GV LS+LG+PSYC+G+R+LY+NSSNVT+MDFC Sbjct 2194 FSKLFTIAMWLLLLSICLGSLVYVTAAFGVLLSNLGMPSYCNGIRDLYVNSSNVTSMDFC 2253 Query 1436 QGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLG 1495 +G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGL+AEW LAYMLFTKFFYLLG Sbjct 2254 EGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTLLGLSAEWFLAYMLFTKFFYLLG 2313 Query 1496 LSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMD 1555 LSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMY+FFA FYYVWKSYVHIMD Sbjct 2314 LSAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYLFFAFFYYVWKSYVHIMD 2373 Query 1556 GCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGS 1615 GCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCKAHNWNCLNCDTFCAGS Sbjct 2374 GCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGS 2433 Query 1616 TFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFV 1675 TFISDEVARDLSLQFKRPINPTDQS+YVVDSV VKN AL+LYFDKAGQKTYERH LSHFV Sbjct 2434 TFISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNSALYLYFDKAGQKTYERHTLSHFV 2493 Query 1676 NLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGD 1735 NLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQAL+SDVGD Sbjct 2494 NLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALISDVGD 2553 Query 1736 STEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVV 1795 STEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGV LDGVLSTFVSAARQGVV Sbjct 2554 STEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVVLDGVLSTFVSAARQGVV 2613 Query 1796 DTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ 1855 DTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ Sbjct 2614 DTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ 2673 Query 1856 VAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG 1915 VAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVN ITTKISLKG Sbjct 2674 VAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNAITTKISLKG 2733 Query 1916 G 1916 G Sbjct 2734 G 2734 >ORF1a polyprotein [Horseshoe bat sarbecovirus] Sequence ID: WMT59309.1 Length: 4377 Range 1: 819 to 2735 Score:3629 bits(9411), Expect:0.0, Method:Compositional matrix adjust., Identities:1770/1921(92%), Positives:1838/1921(95%), Gaps:9/1921(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP KGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APTKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEE E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEEYE 938 Query 121 DEEETCE----HEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 +EEE E HEYGTE+DYKGLPLEFGAST+ HVEEEEEE DWL E EPEPE Sbjct 939 EEEEVSEETCEHEYGTEEDYKGLPLEFGASTDITHVEEEEEE-DWLG---ETEPEPELTS 994 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQF GYLKLTDNVAIKC+DIVKEAQSA P VIVNAAN HLKHGGGVAGALNKATNG Sbjct 995 EEPVNQFTGYLKLTDNVAIKCVDIVKEAQSANPMVIVNAANVHLKHGGGVAGALNKATNG 1054 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESD+YI+ NGPLTVGGSCLLSGHNLA+KCLHVVGPNLNAGEDVQLLK AYENFNSQ Sbjct 1055 AMQKESDDYIKLNGPLTVGGSCLLSGHNLAKKCLHVVGPNLNAGEDVQLLKAAYENFNSQ 1114 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 D+LLAPLLSAGIFGAKPLQSL+MCV+IVRTQVY+AVNDK+LY+Q+V+DYLDSL+P+V +P Sbjct 1115 DILLAPLLSAGIFGAKPLQSLQMCVQIVRTQVYIAVNDKALYEQVVMDYLDSLEPRVGAP 1174 Query 357 NKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKL 415 +EE P+ E+PK + V +K VDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKL Sbjct 1175 KQEELPETEDPKVEEKSVVQKTVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKL 1234 Query 416 YQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVA 475 YQDSQNMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+VPV Sbjct 1235 YQDSQNMLRGEDMSFLEKDAPYVVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKVPVD 1294 Query 476 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAE 535 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPN KEE+LGTVSWNLREMLAHAE Sbjct 1295 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNAKEEILGTVSWNLREMLAHAE 1354 Query 536 ETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNE 595 ETRKLMPIC+DVRAIMATIQRKYKGIK+QEGIVDYGVRFFFYTSKEPVASIITKLNSLNE Sbjct 1355 ETRKLMPICVDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNSLNE 1414 Query 596 PLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVE 655 PLVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKT EE+FVE Sbjct 1415 PLVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEHFVE 1474 Query 656 TTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSL 715 T SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SPIEFHLDGEVLPLDKLKSLLSL Sbjct 1475 TVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPIEFHLDGEVLPLDKLKSLLSL 1534 Query 716 REVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLP 775 REVKTIKVFTTVDNTNLHT +VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLP Sbjct 1535 REVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLP 1594 Query 776 SDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA 835 SDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA Sbjct 1595 SDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA 1654 Query 836 LQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE 895 LQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE Sbjct 1655 LQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE 1714 Query 896 SAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQES 955 SA+RVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQQES Sbjct 1715 SARRVLNVVCKHCGQKTTTLMGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQES 1774 Query 956 SFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGP 1015 SFVMMSAPPAEY LQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGP Sbjct 1775 SFVMMSAPPAEYTLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGP 1834 Query 1016 VTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPN 1075 VTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PN Sbjct 1835 VTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPN 1894 Query 1076 ASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKG 1135 ASFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SFKKG Sbjct 1895 ASFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKG 1954 Query 1136 AKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACE 1195 AKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNLACE Sbjct 1955 AKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNLACE 2014 Query 1196 SQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEE 1255 SQ TSEEVVENPT+QKE+IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAYVE Sbjct 2015 SQQLTSEEVVENPTIQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAYVEN 2074 Query 1256 TSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQ 1315 TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYV+PFLG+ A+ TSNC K+ VQ Sbjct 2075 TSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVRPFLGRAAITTSNCAKRLVQ 2134 Query 1316 RVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPK 1375 RVF+NYMPYV+TLLFQLCTFT+STNSRI+ASLPTTIAKNSVK VA+LCLD INYVKSPK Sbjct 2135 RVFNNYMPYVLTLLFQLCTFTRSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYVKSPK 2194 Query 1376 FSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFC 1435 FSKLFTI MWLLLLSICLGSL YVTA LGV LS+ G PSYC GVRELY+NSSNVTTMDFC Sbjct 2195 FSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNFGAPSYCSGVRELYLNSSNVTTMDFC 2254 Query 1436 QGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLG 1495 +G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLG Sbjct 2255 EGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWFLAYMLFTKFFYLLG 2314 Query 1496 LSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMD 1555 LSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMD Sbjct 2315 LSAIMQLFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMD 2374 Query 1556 GCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGS 1615 GCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGS Sbjct 2375 GCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGS 2434 Query 1616 TFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFV 1675 TFISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFV Sbjct 2435 TFISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFV 2494 Query 1676 NLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGD 1735 NLDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGD Sbjct 2495 NLDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGD 2554 Query 1736 STEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVV 1795 STEVSVKMFDAY+DTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVV Sbjct 2555 STEVSVKMFDAYIDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVV 2614 Query 1796 DTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ 1855 DTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ Sbjct 2615 DTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ 2674 Query 1856 VAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG 1915 VAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG Sbjct 2675 VAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG 2734 Query 1916 G 1916 G Sbjct 2735 G 2735 >ORF1ab polyprotein [Horseshoe bat sarbecovirus] Sequence ID: WMT59308.1 Length: 7068 Range 1: 819 to 2735 Score:3624 bits(9397), Expect:0.0, Method:Compositional matrix adjust., Identities:1770/1921(92%), Positives:1838/1921(95%), Gaps:9/1921(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP KGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APTKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEE E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEEYE 938 Query 121 DEEETCE----HEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 +EEE E HEYGTE+DYKGLPLEFGAST+ HVEEEEEE DWL E EPEPE Sbjct 939 EEEEVSEETCEHEYGTEEDYKGLPLEFGASTDITHVEEEEEE-DWLG---ETEPEPELTS 994 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQF GYLKLTDNVAIKC+DIVKEAQSA P VIVNAAN HLKHGGGVAGALNKATNG Sbjct 995 EEPVNQFTGYLKLTDNVAIKCVDIVKEAQSANPMVIVNAANVHLKHGGGVAGALNKATNG 1054 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESD+YI+ NGPLTVGGSCLLSGHNLA+KCLHVVGPNLNAGEDVQLLK AYENFNSQ Sbjct 1055 AMQKESDDYIKLNGPLTVGGSCLLSGHNLAKKCLHVVGPNLNAGEDVQLLKAAYENFNSQ 1114 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 D+LLAPLLSAGIFGAKPLQSL+MCV+IVRTQVY+AVNDK+LY+Q+V+DYLDSL+P+V +P Sbjct 1115 DILLAPLLSAGIFGAKPLQSLQMCVQIVRTQVYIAVNDKALYEQVVMDYLDSLEPRVGAP 1174 Query 357 NKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKL 415 +EE P+ E+PK + V +K VDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKL Sbjct 1175 KQEELPETEDPKVEEKSVVQKTVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKL 1234 Query 416 YQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVA 475 YQDSQNMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+VPV Sbjct 1235 YQDSQNMLRGEDMSFLEKDAPYVVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKVPVD 1294 Query 476 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAE 535 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPN KEE+LGTVSWNLREMLAHAE Sbjct 1295 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNAKEEILGTVSWNLREMLAHAE 1354 Query 536 ETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNE 595 ETRKLMPIC+DVRAIMATIQRKYKGIK+QEGIVDYGVRFFFYTSKEPVASIITKLNSLNE Sbjct 1355 ETRKLMPICVDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNSLNE 1414 Query 596 PLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVE 655 PLVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKT EE+FVE Sbjct 1415 PLVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEHFVE 1474 Query 656 TTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSL 715 T SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SPIEFHLDGEVLPLDKLKSLLSL Sbjct 1475 TVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPIEFHLDGEVLPLDKLKSLLSL 1534 Query 716 REVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLP 775 REVKTIKVFTTVDNTNLHT +VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLP Sbjct 1535 REVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLP 1594 Query 776 SDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA 835 SDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA Sbjct 1595 SDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA 1654 Query 836 LQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE 895 LQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE Sbjct 1655 LQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE 1714 Query 896 SAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQES 955 SA+RVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQQES Sbjct 1715 SARRVLNVVCKHCGQKTTTLMGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQES 1774 Query 956 SFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGP 1015 SFVMMSAPPAEY LQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGP Sbjct 1775 SFVMMSAPPAEYTLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGP 1834 Query 1016 VTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPN 1075 VTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PN Sbjct 1835 VTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPN 1894 Query 1076 ASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKG 1135 ASFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SFKKG Sbjct 1895 ASFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKG 1954 Query 1136 AKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACE 1195 AKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNLACE Sbjct 1955 AKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNLACE 2014 Query 1196 SQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEE 1255 SQ TSEEVVENPT+QKE+IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAYVE Sbjct 2015 SQQLTSEEVVENPTIQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAYVEN 2074 Query 1256 TSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQ 1315 TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYV+PFLG+ A+ TSNC K+ VQ Sbjct 2075 TSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVRPFLGRAAITTSNCAKRLVQ 2134 Query 1316 RVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPK 1375 RVF+NYMPYV+TLLFQLCTFT+STNSRI+ASLPTTIAKNSVK VA+LCLD INYVKSPK Sbjct 2135 RVFNNYMPYVLTLLFQLCTFTRSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYVKSPK 2194 Query 1376 FSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFC 1435 FSKLFTI MWLLLLSICLGSL YVTA LGV LS+ G PSYC GVRELY+NSSNVTTMDFC Sbjct 2195 FSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNFGAPSYCSGVRELYLNSSNVTTMDFC 2254 Query 1436 QGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLG 1495 +G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLG Sbjct 2255 EGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWFLAYMLFTKFFYLLG 2314 Query 1496 LSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMD 1555 LSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMD Sbjct 2315 LSAIMQLFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMD 2374 Query 1556 GCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGS 1615 GCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGS Sbjct 2375 GCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGS 2434 Query 1616 TFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFV 1675 TFISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFV Sbjct 2435 TFISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFV 2494 Query 1676 NLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGD 1735 NLDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGD Sbjct 2495 NLDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGD 2554 Query 1736 STEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVV 1795 STEVSVKMFDAY+DTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVV Sbjct 2555 STEVSVKMFDAYIDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVV 2614 Query 1796 DTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ 1855 DTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ Sbjct 2615 DTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ 2674 Query 1856 VAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG 1915 VAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG Sbjct 2675 VAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG 2734 Query 1916 G 1916 G Sbjct 2735 G 2735 >ORF1ab polyprotein [Horseshoe bat sarbecovirus] Sequence ID: WMT59439.1 Length: 7068 Range 1: 819 to 2735 Score:3624 bits(9397), Expect:0.0, Method:Compositional matrix adjust., Identities:1770/1921(92%), Positives:1838/1921(95%), Gaps:9/1921(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP KGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APTKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEE E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEEYE 938 Query 121 DEEETCE----HEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 +EEE E HEYGTE+DYKGLPLEFGAST+ HVEEEEEE DWL E EPEPE Sbjct 939 EEEEVSEETCEHEYGTEEDYKGLPLEFGASTDITHVEEEEEE-DWLG---ETEPEPELTS 994 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQF GYLKLTDNVAIKC+DIVKEAQSA P VIVNAAN HLKHGGGVAGALNKATNG Sbjct 995 EEPVNQFTGYLKLTDNVAIKCVDIVKEAQSANPMVIVNAANVHLKHGGGVAGALNKATNG 1054 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESD+YI+ NGPLTVGGSCLLSGHNLA+KCLHVVGPNLNAGEDVQLLK AYENFNSQ Sbjct 1055 AMQKESDDYIKLNGPLTVGGSCLLSGHNLAKKCLHVVGPNLNAGEDVQLLKAAYENFNSQ 1114 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 D+LLAPLLSAGIFGAKPLQSL+MCV+IVRTQVY+AVNDK+LY+Q+V+DYLDSL+P+V +P Sbjct 1115 DILLAPLLSAGIFGAKPLQSLQMCVQIVRTQVYIAVNDKALYEQVVMDYLDSLEPRVGAP 1174 Query 357 NKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKL 415 +EE P+ E+PK + V +K VDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKL Sbjct 1175 KQEELPETEDPKVEEKSVVQKTVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKL 1234 Query 416 YQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVA 475 YQDSQNMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+VPV Sbjct 1235 YQDSQNMLRGEDMSFLEKDAPYVVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKVPVD 1294 Query 476 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAE 535 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPN KEE+LGTVSWNLREMLAHAE Sbjct 1295 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNAKEEILGTVSWNLREMLAHAE 1354 Query 536 ETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNE 595 ETRKLMPIC+DVRAIMATIQRKYKGIK+QEGIVDYGVRFFFYTSKEPVASIITKLNSLNE Sbjct 1355 ETRKLMPICVDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNSLNE 1414 Query 596 PLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVE 655 PLVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKT EE+FVE Sbjct 1415 PLVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEHFVE 1474 Query 656 TTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSL 715 T SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SPIEFHLDGEVLPLDKLKSLLSL Sbjct 1475 TVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPIEFHLDGEVLPLDKLKSLLSL 1534 Query 716 REVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLP 775 REVKTIKVFTTVDNTNLHT +VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLP Sbjct 1535 REVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLP 1594 Query 776 SDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA 835 SDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA Sbjct 1595 SDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA 1654 Query 836 LQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE 895 LQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE Sbjct 1655 LQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE 1714 Query 896 SAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQES 955 SA+RVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQQES Sbjct 1715 SARRVLNVVCKHCGQKTTTLMGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQES 1774 Query 956 SFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGP 1015 SFVMMSAPPAEY LQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGP Sbjct 1775 SFVMMSAPPAEYTLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGP 1834 Query 1016 VTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPN 1075 VTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PN Sbjct 1835 VTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPN 1894 Query 1076 ASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKG 1135 ASFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SFKKG Sbjct 1895 ASFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKG 1954 Query 1136 AKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACE 1195 AKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNLACE Sbjct 1955 AKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNLACE 2014 Query 1196 SQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEE 1255 SQ TSEEVVENPT+QKE+IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAYVE Sbjct 2015 SQQLTSEEVVENPTIQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAYVEN 2074 Query 1256 TSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQ 1315 TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYV+PFLG+ A+ TSNC K+ VQ Sbjct 2075 TSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVRPFLGRAAITTSNCAKRLVQ 2134 Query 1316 RVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPK 1375 RVF+NYMPYV+TLLFQLCTFT+STNSRI+ASLPTTIAKNSVK VA+LCLD INYVKSPK Sbjct 2135 RVFNNYMPYVLTLLFQLCTFTRSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYVKSPK 2194 Query 1376 FSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFC 1435 FSKLFTI MWLLLLSICLGSL YVTA LGV LS+ G PSYC GVRELY+NSSNVTTMDFC Sbjct 2195 FSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNFGAPSYCSGVRELYLNSSNVTTMDFC 2254 Query 1436 QGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLG 1495 +G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLG Sbjct 2255 EGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWFLAYMLFTKFFYLLG 2314 Query 1496 LSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMD 1555 LSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMD Sbjct 2315 LSAIMQLFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMD 2374 Query 1556 GCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGS 1615 GCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGS Sbjct 2375 GCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGS 2434 Query 1616 TFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFV 1675 TFISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFV Sbjct 2435 TFISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFV 2494 Query 1676 NLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGD 1735 NLDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGD Sbjct 2495 NLDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGD 2554 Query 1736 STEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVV 1795 STEVSVKMFDAY+DTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVV Sbjct 2555 STEVSVKMFDAYIDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVV 2614 Query 1796 DTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ 1855 DTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ Sbjct 2615 DTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ 2674 Query 1856 VAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG 1915 VAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG Sbjct 2675 VAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG 2734 Query 1916 G 1916 G Sbjct 2735 G 2735 >ORF1ab polyprotein [Horseshoe bat sarbecovirus] Sequence ID: WMT59407.1 Length: 7068 Range 1: 819 to 2735 Score:3623 bits(9396), Expect:0.0, Method:Compositional matrix adjust., Identities:1770/1921(92%), Positives:1838/1921(95%), Gaps:9/1921(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP KGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APTKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEE E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEEYE 938 Query 121 DEEETCE----HEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 +EEE E HEYGTE+DYKGLPLEFGAST+ HVEEEEEE DWL E EPEPE Sbjct 939 EEEEVSEETCEHEYGTEEDYKGLPLEFGASTDITHVEEEEEE-DWLG---ETEPEPELTS 994 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQF GYLKLTDNVAIKC+DIVKEAQSA P VIVNAAN HLKHGGGVAGALNKATNG Sbjct 995 EEPVNQFTGYLKLTDNVAIKCVDIVKEAQSANPMVIVNAANVHLKHGGGVAGALNKATNG 1054 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESD+YI+ NGPLTVGGSCLLSGHNLA+KCLHVVGPNLNAGEDVQLLK AYENFNSQ Sbjct 1055 AMQKESDDYIKLNGPLTVGGSCLLSGHNLAKKCLHVVGPNLNAGEDVQLLKAAYENFNSQ 1114 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 D+LLAPLLSAGIFGAKPLQSL+MCV+IVRTQVY+AVNDK+LY+Q+V+DYLDSL+P+V +P Sbjct 1115 DILLAPLLSAGIFGAKPLQSLQMCVQIVRTQVYIAVNDKALYEQVVMDYLDSLEPRVGAP 1174 Query 357 NKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKL 415 +EE P+ E+PK + V +K VDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKL Sbjct 1175 KQEELPETEDPKVEEKSVVQKTVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKL 1234 Query 416 YQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVA 475 YQDSQNMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+VPV Sbjct 1235 YQDSQNMLRGEDMSFLEKDAPYVVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKVPVD 1294 Query 476 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAE 535 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPN KEE+LGTVSWNLREMLAHAE Sbjct 1295 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNAKEEILGTVSWNLREMLAHAE 1354 Query 536 ETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNE 595 ETRKLMPIC+DVRAIMATIQRKYKGIK+QEGIVDYGVRFFFYTSKEPVASIITKLNSLNE Sbjct 1355 ETRKLMPICVDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNSLNE 1414 Query 596 PLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVE 655 PLVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKT EE+FVE Sbjct 1415 PLVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEHFVE 1474 Query 656 TTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSL 715 T SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SPIEFHLDGEVLPLDKLKSLLSL Sbjct 1475 TVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPIEFHLDGEVLPLDKLKSLLSL 1534 Query 716 REVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLP 775 REVKTIKVFTTVDNTNLHT +VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLP Sbjct 1535 REVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLP 1594 Query 776 SDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA 835 SDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA Sbjct 1595 SDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA 1654 Query 836 LQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE 895 LQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE Sbjct 1655 LQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE 1714 Query 896 SAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQES 955 SA+RVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQQES Sbjct 1715 SARRVLNVVCKHCGQKTTTLMGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQES 1774 Query 956 SFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGP 1015 SFVMMSAPPAEY LQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGP Sbjct 1775 SFVMMSAPPAEYTLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGP 1834 Query 1016 VTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPN 1075 VTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PN Sbjct 1835 VTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPN 1894 Query 1076 ASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKG 1135 ASFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SFKKG Sbjct 1895 ASFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKG 1954 Query 1136 AKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACE 1195 AKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNLACE Sbjct 1955 AKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNLACE 2014 Query 1196 SQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEE 1255 SQ TSEEVVENPT+QKE+IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAYVE Sbjct 2015 SQQLTSEEVVENPTIQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAYVEN 2074 Query 1256 TSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQ 1315 TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYV+PFLG+ A+ TSNC K+ VQ Sbjct 2075 TSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVRPFLGRAAITTSNCAKRLVQ 2134 Query 1316 RVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPK 1375 RVF+NYMPYV+TLLFQLCTFT+STNSRI+ASLPTTIAKNSVK VA+LCLD INYVKSPK Sbjct 2135 RVFNNYMPYVLTLLFQLCTFTRSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYVKSPK 2194 Query 1376 FSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFC 1435 FSKLFTI MWLLLLSICLGSL YVTA LGV LS+ G PSYC GVRELY+NSSNVTTMDFC Sbjct 2195 FSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNFGAPSYCSGVRELYLNSSNVTTMDFC 2254 Query 1436 QGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLG 1495 +G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLG Sbjct 2255 EGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWFLAYMLFTKFFYLLG 2314 Query 1496 LSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMD 1555 LSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMD Sbjct 2315 LSAIMQLFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMD 2374 Query 1556 GCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGS 1615 GCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGS Sbjct 2375 GCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGS 2434 Query 1616 TFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFV 1675 TFISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFV Sbjct 2435 TFISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFV 2494 Query 1676 NLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGD 1735 NLDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGD Sbjct 2495 NLDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGD 2554 Query 1736 STEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVV 1795 STEVSVKMFDAY+DTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVV Sbjct 2555 STEVSVKMFDAYIDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVV 2614 Query 1796 DTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ 1855 DTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ Sbjct 2615 DTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ 2674 Query 1856 VAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG 1915 VAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG Sbjct 2675 VAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG 2734 Query 1916 G 1916 G Sbjct 2735 G 2735 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47419.1 Length: 7072 Range 1: 819 to 2739 Score:3620 bits(9386), Expect:0.0, Method:Compositional matrix adjust., Identities:1766/1921(92%), Positives:1846/1921(96%), Gaps:5/1921(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP KGVTFGEDTV+EVQGYKNV+ITFELD RVDKVLNEKCS+YTVESGTEVTEFACVVAE Sbjct 819 APTKGVTFGEDTVVEVQGYKNVRITFELDERVDKVLNEKCSIYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEW VATFYLFDD+GEEKLSSRMYCSF+PPDE+E+CEE E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWGVATFYLFDDSGEEKLSSRMYCSFFPPDEDEECEEYE 938 Query 121 DEEETCE----HEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 +EEE E HEYGTEDDYKGLPLEFGASTET ++EE+EEEDWLDDA+EAEPEPE L Sbjct 939 EEEEISEETCEHEYGTEDDYKGLPLEFGASTETQQIDEEQEEEDWLDDAVEAEPEPESLH 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQF GYLKLTDNVAIKC DIVKEAQSAKPTVIVNAAN HLKHGGGVAGALN+ATNG Sbjct 999 EEPVNQFTGYLKLTDNVAIKCADIVKEAQSAKPTVIVNAANIHLKHGGGVAGALNRATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESD+YI+QNGPLTVGGSCLLSGHNLA+KCLHVVGPNLNAGED+QLLK AYENFNSQ Sbjct 1059 AMQKESDDYIKQNGPLTVGGSCLLSGHNLAKKCLHVVGPNLNAGEDIQLLKAAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 D LLAPLLSAGIFGAKPLQSL++CV+ VRTQVY+AVNDK+LY+Q+V+DYLDSLKP++E+P Sbjct 1119 DALLAPLLSAGIFGAKPLQSLQVCVQTVRTQVYIAVNDKALYEQVVMDYLDSLKPRLEAP 1178 Query 357 NKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKL 415 +EE PK E+PK + V +KPVDVKPKIKACIDEVTTTLEETKFLTNKLLLF DINGKL Sbjct 1179 KQEELPKTEDPKVEEKSVVQKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFTDINGKL 1238 Query 416 YQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVA 475 YQDS+NMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+VP+ Sbjct 1239 YQDSKNMLRGEDMSFLEKDAPYMVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKVPID 1298 Query 476 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAE 535 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPN KEE+LGTVSWNLREMLAHAE Sbjct 1299 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNAKEEILGTVSWNLREMLAHAE 1358 Query 536 ETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNE 595 ETRKLMP+C+DVRAIMATIQRKYKGIK+QEGIVDYGVRFFFYTSKEPVASIITKLNSLNE Sbjct 1359 ETRKLMPVCMDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNSLNE 1418 Query 596 PLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVE 655 PLVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKTPEE+FVE Sbjct 1419 PLVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTPEEHFVE 1478 Query 656 TTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSL 715 T SLAG+YRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEV+PLDKLKSLLSL Sbjct 1479 TVSLAGAYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPVEFHLDGEVIPLDKLKSLLSL 1538 Query 716 REVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLP 775 REVKTIKVFTTVDNTNLHT +VDMSMTYGQQ GPTYLDGADVTKIKPHVNHEGKTFFVLP Sbjct 1539 REVKTIKVFTTVDNTNLHTQLVDMSMTYGQQLGPTYLDGADVTKIKPHVNHEGKTFFVLP 1598 Query 776 SDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA 835 SDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA Sbjct 1599 SDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA 1658 Query 836 LQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE 895 LQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE Sbjct 1659 LQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE 1718 Query 896 SAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQES 955 SAKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQQES Sbjct 1719 SAKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQES 1778 Query 956 SFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGP 1015 SFVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGP Sbjct 1779 SFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGP 1838 Query 1016 VTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPN 1075 VTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PN Sbjct 1839 VTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPN 1898 Query 1076 ASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKG 1135 ASFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SFKKG Sbjct 1899 ASFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKG 1958 Query 1136 AKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACE 1195 AKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNLACE Sbjct 1959 AKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNLACE 2018 Query 1196 SQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEE 1255 SQ TSEEVVENPTVQKE+IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAYVE Sbjct 2019 SQQATSEEVVENPTVQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAYVEN 2078 Query 1256 TSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQ 1315 TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYV+PFLG+ AV TSNC K+ VQ Sbjct 2079 TSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVRPFLGRAAVTTSNCAKRLVQ 2138 Query 1316 RVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPK 1375 RVF+NYMPYV+TLLFQLCTFTKSTNSRI+ASLPTTIAKNSVK VA+LCLD INYVKSPK Sbjct 2139 RVFNNYMPYVLTLLFQLCTFTKSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYVKSPK 2198 Query 1376 FSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFC 1435 FSKLFTI MWLLLLSICLGSL YVTA LGV LS+LG PSYC GVR+LY+NSSNVTTMDFC Sbjct 2199 FSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNLGAPSYCSGVRDLYLNSSNVTTMDFC 2258 Query 1436 QGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLG 1495 +G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLG Sbjct 2259 EGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLG 2318 Query 1496 LSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMD 1555 LSAIMQ FFGYFASHFISNSWLMW IISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMD Sbjct 2319 LSAIMQVFFGYFASHFISNSWLMWLIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMD 2378 Query 1556 GCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGS 1615 GCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGS Sbjct 2379 GCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGS 2438 Query 1616 TFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFV 1675 TFISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFV Sbjct 2439 TFISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFV 2498 Query 1676 NLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGD 1735 NLDNLRANN+KGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGD Sbjct 2499 NLDNLRANNSKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGD 2558 Query 1736 STEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVV 1795 STEVSVKMFDAYVDTFSATFSVPMEKLKALVATAH+ELAKGVALDGVLSTFVSAARQGVV Sbjct 2559 STEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHNELAKGVALDGVLSTFVSAARQGVV 2618 Query 1796 DTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ 1855 DTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ Sbjct 2619 DTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ 2678 Query 1856 VAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG 1915 VAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG Sbjct 2679 VAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG 2738 Query 1916 G 1916 G Sbjct 2739 G 2739 >ORF1a polyprotein [Severe acute respiratory syndrome-related coronavirus] Sequence ID: WEG19511.1 Length: 4382 Range 1: 819 to 2740 Score:3615 bits(9374), Expect:0.0, Method:Compositional matrix adjust., Identities:1763/1924(92%), Positives:1831/1924(95%), Gaps:10/1924(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP KGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APTKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPD+EEDC+E E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDDEEDCDEYE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPE--- 173 +EEE +C HEYGTE+DY+GLPLEFGASTE EEEEEEDWL DA E Sbjct 939 EEEEVLEESCAHEYGTEEDYQGLPLEFGASTEMQ--VEEEEEEDWLGDATELSEHELESE 996 Query 174 PLPEEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKA 233 P PEEPVNQF GYLKLTDNVAIKC+DIVKEAQ+A PTVIVNAAN HLKHGGGVAGALNKA Sbjct 997 PTPEEPVNQFTGYLKLTDNVAIKCVDIVKEAQNANPTVIVNAANIHLKHGGGVAGALNKA 1056 Query 234 TNGAMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENF 293 TNGAMQ ESD+YI+ NGPL VGGSCLLSGHNLA+KCLHVVGPNLNAGED+QLLK AYENF Sbjct 1057 TNGAMQKESDDYIKLNGPLAVGGSCLLSGHNLAKKCLHVVGPNLNAGEDIQLLKAAYENF 1116 Query 294 NSQDVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKV 353 NSQD LLAPLLSAGIFGAKPLQSL++CV+ VRTQVY+AVNDK+LY+Q+V+DYLDSLKP+V Sbjct 1117 NSQDTLLAPLLSAGIFGAKPLQSLQVCVQTVRTQVYIAVNDKALYEQVVMDYLDSLKPRV 1176 Query 354 ESPNKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 412 E+P +EE PK E+PK + V +KPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN Sbjct 1177 EAPKQEEPPKTEDPKIEEKSVVQKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 1236 Query 413 GKLYQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEV 472 GKLY DS NMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+V Sbjct 1237 GKLYHDSHNMLRGEDMSFLEKDAPYMVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKV 1296 Query 473 PVAEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLA 532 PV EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPN KEE+LGTVSWNLREMLA Sbjct 1297 PVDEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNAKEEILGTVSWNLREMLA 1356 Query 533 HAEETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 592 HAEETRKLMPIC+DVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS Sbjct 1357 HAEETRKLMPICMDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 1416 Query 593 LNEPLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEY 652 LNEPLVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKT EE+ Sbjct 1417 LNEPLVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEH 1476 Query 653 FVETTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSL 712 FVET SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSL Sbjct 1477 FVETVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPVEFHLDGEVLPLDKLKSL 1536 Query 713 LSLREVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 772 LSLREVKTIKVFTTVDNTNLHT +VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF Sbjct 1537 LSLREVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 1596 Query 773 VLPSDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 832 VLPSDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV Sbjct 1597 VLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 1656 Query 833 LLALQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 892 LLALQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA Sbjct 1657 LLALQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 1716 Query 893 NLESAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQ 952 NLESAKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQ Sbjct 1717 NLESAKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQ 1776 Query 953 QESSFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEY 1012 QESSFVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEY Sbjct 1777 QESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEY 1836 Query 1013 KGPVTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQP 1072 KGPVTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP Sbjct 1837 KGPVTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQP 1896 Query 1073 MPNASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSF 1132 +PNASFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SF Sbjct 1897 LPNASFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASF 1956 Query 1133 KKGAKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNL 1192 KKGAKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNL Sbjct 1957 KKGAKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNL 2016 Query 1193 ACESQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAY 1252 ACESQ TSEEVVENPT+QKE++ECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAY Sbjct 2017 ACESQQPTSEEVVENPTIQKEVLECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAY 2076 Query 1253 VEETSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKK 1312 VE TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ A+ TSNC K+ Sbjct 2077 VENTSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAAITTSNCAKR 2136 Query 1313 CVQRVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVK 1372 Q VF+NYMPYV+TLLFQLCTFTKSTNSRI+ASLPTTIAKNSVK VA+LCLD INYVK Sbjct 2137 LAQCVFNNYMPYVLTLLFQLCTFTKSTNSRIRASLPTTIAKNSVKGVARLCLDAVINYVK 2196 Query 1373 SPKFSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTM 1432 SPKFSKLFTI MWLLLLSICLGSL YVTA LGV LS+ G PSYC GVRE Y+NSSNVTTM Sbjct 2197 SPKFSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNFGAPSYCSGVRESYLNSSNVTTM 2256 Query 1433 DFCQGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFY 1492 DFC+G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFY Sbjct 2257 DFCEGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWFLAYMLFTKFFY 2316 Query 1493 LLGLSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVH 1552 LLGLSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVH Sbjct 2317 LLGLSAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVH 2376 Query 1553 IMDGCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFC 1612 IMDGCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFC Sbjct 2377 IMDGCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFC 2436 Query 1613 AGSTFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLS 1672 GSTFISDEVARDLSLQFKRPINPTDQS+Y+VDSV VKNGALHLYFDKAGQKTYERHPLS Sbjct 2437 TGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVAVKNGALHLYFDKAGQKTYERHPLS 2496 Query 1673 HFVNLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSD 1732 HFVNLDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSD Sbjct 2497 HFVNLDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSD 2556 Query 1733 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 1792 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ Sbjct 2557 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 2616 Query 1793 GVVDTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 1852 GVVDTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI Sbjct 2617 GVVDTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 2676 Query 1853 NAQVAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 1912 NAQVAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS Sbjct 2677 NAQVAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 2736 Query 1913 LKGG 1916 LKGG Sbjct 2737 LKGG 2740 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47429.1 Length: 7072 Range 1: 819 to 2739 Score:3612 bits(9367), Expect:0.0, Method:Compositional matrix adjust., Identities:1768/1921(92%), Positives:1842/1921(95%), Gaps:5/1921(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP KGVTFG DTV+EVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APSKGVTFGGDTVVEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEE E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEEYE 938 Query 121 DEEETCE----HEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 +EEE HEYGTEDDYKG+PLEFGASTET ++EE+EEEDWLDDA+EAEPEPE L Sbjct 939 EEEEVSVETCEHEYGTEDDYKGIPLEFGASTETQQIDEEQEEEDWLDDAVEAEPEPESLH 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQF GYLKLTDNVAIKC DIVKEAQSAKPTVIVNAAN HLKHGGGVAGALN+ATNG Sbjct 999 EEPVNQFTGYLKLTDNVAIKCADIVKEAQSAKPTVIVNAANIHLKHGGGVAGALNRATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESD+YI+QNGPLTVGGSCLLSGHNLA+KCLHVVGPNLNAGED+QLLK AYENFNSQ Sbjct 1059 AMQKESDDYIKQNGPLTVGGSCLLSGHNLAKKCLHVVGPNLNAGEDIQLLKAAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 D LLAPLLSAGIFGAKPLQSL++CV+ VRTQVY+AVNDK+LY+Q+V+DYLDSLKP++E+P Sbjct 1119 DALLAPLLSAGIFGAKPLQSLQVCVQTVRTQVYIAVNDKALYEQVVMDYLDSLKPRLEAP 1178 Query 357 NKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKL 415 +EE PK E+PK + V +KPVDVKPKIKACIDEVTTTLEETKFLTNKLLLF DINGKL Sbjct 1179 KQEELPKTEDPKVEEKSVVQKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFTDINGKL 1238 Query 416 YQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVA 475 YQDS+NMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+VP+ Sbjct 1239 YQDSKNMLRGEDMSFLEKDAPYMVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKVPID 1298 Query 476 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAE 535 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLP ETPN KEE+LGTVSWNLREMLAHAE Sbjct 1299 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPPETPNAKEEILGTVSWNLREMLAHAE 1358 Query 536 ETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNE 595 ETRKLMP+C+DVRAIMATIQRKYKGIK+QEGIVDYGVRFFFYTSKEPVASIITKLNSLNE Sbjct 1359 ETRKLMPVCMDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNSLNE 1418 Query 596 PLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVE 655 PLVTMPIGYVTHG NLEEAARCMRSLKAP VVSVSSPDAVT YNGYLTSSSKTPEE+FVE Sbjct 1419 PLVTMPIGYVTHGFNLEEAARCMRSLKAPVVVSVSSPDAVTTYNGYLTSSSKTPEEHFVE 1478 Query 656 TTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSL 715 T SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEV+PLDKLKSLLSL Sbjct 1479 TVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPVEFHLDGEVIPLDKLKSLLSL 1538 Query 716 REVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLP 775 REVKTIKVFTTVDNTNLHT +VDMSMTYGQQ GPTYLDGADVTKIKPHVNHEGKTFFVLP Sbjct 1539 REVKTIKVFTTVDNTNLHTQLVDMSMTYGQQLGPTYLDGADVTKIKPHVNHEGKTFFVLP 1598 Query 776 SDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA 835 SDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA Sbjct 1599 SDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA 1658 Query 836 LQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE 895 LQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE Sbjct 1659 LQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE 1718 Query 896 SAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQES 955 SAKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQQES Sbjct 1719 SAKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQES 1778 Query 956 SFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGP 1015 SFVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGP Sbjct 1779 SFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGP 1838 Query 1016 VTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPN 1075 VTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PN Sbjct 1839 VTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPN 1898 Query 1076 ASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKG 1135 ASFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SFKKG Sbjct 1899 ASFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKG 1958 Query 1136 AKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACE 1195 AKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNLACE Sbjct 1959 AKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNLACE 2018 Query 1196 SQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEE 1255 SQ TSEEVVENPTVQKE+IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAYVE Sbjct 2019 SQQATSEEVVENPTVQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAYVEN 2078 Query 1256 TSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQ 1315 TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYV+PFLG+ AV TSNC K+ VQ Sbjct 2079 TSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVRPFLGRAAVTTSNCAKRLVQ 2138 Query 1316 RVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPK 1375 RVF+NYMPYV+TLLFQLCTFTKSTNSRI+ASLPTTIAKNSVK VA+LCLD INYVKSPK Sbjct 2139 RVFNNYMPYVLTLLFQLCTFTKSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYVKSPK 2198 Query 1376 FSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFC 1435 FSKLFTI MWLLLLSICLGSL YVTA LGV LS+LG PSYC GVR+LY+NSSNVTTMDFC Sbjct 2199 FSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNLGAPSYCSGVRDLYLNSSNVTTMDFC 2258 Query 1436 QGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLG 1495 +G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLG Sbjct 2259 EGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLG 2318 Query 1496 LSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMD 1555 LSAIMQ FFGYFASHFISNSWLMW IISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMD Sbjct 2319 LSAIMQVFFGYFASHFISNSWLMWLIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMD 2378 Query 1556 GCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGS 1615 GCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGS Sbjct 2379 GCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGS 2438 Query 1616 TFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFV 1675 TFISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERH LSHFV Sbjct 2439 TFISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHSLSHFV 2498 Query 1676 NLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGD 1735 NLDNLRANN+KGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGD Sbjct 2499 NLDNLRANNSKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGD 2558 Query 1736 STEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVV 1795 STEVSVKMFDAYVDTFSATFSVPMEKLKALVATAH+ELAKGVALDGVLSTFVSAARQGVV Sbjct 2559 STEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHNELAKGVALDGVLSTFVSAARQGVV 2618 Query 1796 DTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ 1855 DTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ Sbjct 2619 DTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ 2678 Query 1856 VAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG 1915 VAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG Sbjct 2679 VAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG 2738 Query 1916 G 1916 G Sbjct 2739 G 2739 >non-structural polyprotein 1a [Bat SARS-like coronavirus RsSHC014] Sequence ID: AGZ48804.1 Length: 4382 Range 1: 819 to 2740 Score:3612 bits(9366), Expect:0.0, Method:Compositional matrix adjust., Identities:1760/1924(91%), Positives:1834/1924(95%), Gaps:10/1924(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP+KGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APIKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPD+EEDC+ECE Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDDEEDCDECE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPE--- 173 +EEE +C HEYGTE+DY+GLPLEFGASTE EEEEEEDWL DA E Sbjct 939 EEEEVLEESCAHEYGTEEDYQGLPLEFGASTEMQ--VEEEEEEDWLGDATELSEHELESE 996 Query 174 PLPEEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKA 233 P PEEPVNQF GYLKLTDNVAIKC+DIVKEAQ+A PTVIVNAAN HLKHGGGVAGALNKA Sbjct 997 PTPEEPVNQFTGYLKLTDNVAIKCVDIVKEAQNANPTVIVNAANIHLKHGGGVAGALNKA 1056 Query 234 TNGAMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENF 293 TNGAMQ ESD+YI+ NGPL VGGSCLLSGHNLA+KCLHVVGPNLNAGED+QLLK AYENF Sbjct 1057 TNGAMQKESDDYIKLNGPLAVGGSCLLSGHNLAKKCLHVVGPNLNAGEDIQLLKAAYENF 1116 Query 294 NSQDVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKV 353 NSQD LLAPLLSAGIFGAKPLQSL++CV+ VRTQVY+AVNDK+LY+Q+V+DYLDSLKP+V Sbjct 1117 NSQDTLLAPLLSAGIFGAKPLQSLQVCVQTVRTQVYIAVNDKALYEQVVMDYLDSLKPRV 1176 Query 354 ESPNKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 412 E+P +EE P+ E+PK + V +KP+DVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN Sbjct 1177 EAPKQEEPPRTEDPKIEEKSVVQKPIDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 1236 Query 413 GKLYQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEV 472 GKLY DS NMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+V Sbjct 1237 GKLYHDSHNMLRGEDMSFLEKDAPYMVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKV 1296 Query 473 PVAEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLA 532 PV EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPN KEE+LGTVSWNLREMLA Sbjct 1297 PVDEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNAKEEILGTVSWNLREMLA 1356 Query 533 HAEETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 592 HAEETRKLMPIC+DVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASII KLNS Sbjct 1357 HAEETRKLMPICMDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIIMKLNS 1416 Query 593 LNEPLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEY 652 LNEPLVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKTPEE+ Sbjct 1417 LNEPLVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTPEEH 1476 Query 653 FVETTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSL 712 FVET SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSL Sbjct 1477 FVETVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPVEFHLDGEVLPLDKLKSL 1536 Query 713 LSLREVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 772 LSLREVKTIKVFTTVDNTNLHT +VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF Sbjct 1537 LSLREVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 1596 Query 773 VLPSDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 832 VLPSDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV Sbjct 1597 VLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 1656 Query 833 LLALQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 892 LLALQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA Sbjct 1657 LLALQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 1716 Query 893 NLESAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQ 952 NLESAKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQ Sbjct 1717 NLESAKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQ 1776 Query 953 QESSFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEY 1012 QESSFVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEY Sbjct 1777 QESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEY 1836 Query 1013 KGPVTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQP 1072 KGPVTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP Sbjct 1837 KGPVTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQP 1896 Query 1073 MPNASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSF 1132 +PNASFDNFKLTCSNTKFAD+LNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SF Sbjct 1897 LPNASFDNFKLTCSNTKFADNLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASF 1956 Query 1133 KKGAKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNL 1192 KKGAKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNL Sbjct 1957 KKGAKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNL 2016 Query 1193 ACESQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAY 1252 ACESQ TSE VVENPT+QKE++ECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAY Sbjct 2017 ACESQQPTSEAVVENPTIQKEVLECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAY 2076 Query 1253 VEETSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKK 1312 VE TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ AV TSNC K+ Sbjct 2077 VENTSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAAVTTSNCAKR 2136 Query 1313 CVQRVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVK 1372 VQR+F+NYMPYV+TLLFQLCTFTKSTNSRI+ASLPTTIAKNSVK VA+LCLD INYVK Sbjct 2137 LVQRMFNNYMPYVLTLLFQLCTFTKSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYVK 2196 Query 1373 SPKFSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTM 1432 SPKFSKLFTI MWLLLLSICLGSL YVTA LGV LS++G PSYC GVRE Y+NSSNVTTM Sbjct 2197 SPKFSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNVGAPSYCSGVRESYLNSSNVTTM 2256 Query 1433 DFCQGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFY 1492 DFC+G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW+LAYMLFTKFFY Sbjct 2257 DFCEGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWVLAYMLFTKFFY 2316 Query 1493 LLGLSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVH 1552 LLGLSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVH Sbjct 2317 LLGLSAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVH 2376 Query 1553 IMDGCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFC 1612 IMDGCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFC Sbjct 2377 IMDGCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFC 2436 Query 1613 AGSTFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLS 1672 GSTFISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLS Sbjct 2437 TGSTFISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLS 2496 Query 1673 HFVNLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSD 1732 HFVNLDNLRANNTKGSLPINVIVFDGKSKC+ESAA+SASVYYSQLMCQPILLLDQ LVSD Sbjct 2497 HFVNLDNLRANNTKGSLPINVIVFDGKSKCDESAARSASVYYSQLMCQPILLLDQVLVSD 2556 Query 1733 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 1792 VG STEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ Sbjct 2557 VGGSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 2616 Query 1793 GVVDTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 1852 GVVDTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI Sbjct 2617 GVVDTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 2676 Query 1853 NAQVAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 1912 NAQVAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS Sbjct 2677 NAQVAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 2736 Query 1913 LKGG 1916 LKGG Sbjct 2737 LKGG 2740 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47424.1 Length: 7072 Range 1: 819 to 2739 Score:3611 bits(9364), Expect:0.0, Method:Compositional matrix adjust., Identities:1768/1921(92%), Positives:1842/1921(95%), Gaps:5/1921(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP KGVTFG DTV+EVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APSKGVTFGGDTVVEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEE E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEEYE 938 Query 121 DEEETCE----HEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 +EEE HEYGTEDDYKG+PLEFGASTET ++EE+EEEDWLDDA+EAEPEPE L Sbjct 939 EEEEVSVETCEHEYGTEDDYKGIPLEFGASTETQQIDEEQEEEDWLDDAVEAEPEPESLH 998 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQF GYLKLTDNVAIKC DIVKEAQSAKPTVIVNAAN HLKHGGGVAGALN+ATNG Sbjct 999 EEPVNQFTGYLKLTDNVAIKCADIVKEAQSAKPTVIVNAANIHLKHGGGVAGALNRATNG 1058 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESD+YI+QNGPLTVGGSCLLSGHNLA+KCLHVVGPNLNAGED+QLLK AYENFNSQ Sbjct 1059 AMQKESDDYIKQNGPLTVGGSCLLSGHNLAKKCLHVVGPNLNAGEDIQLLKAAYENFNSQ 1118 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 D LLAPLLSAGIFGAKPLQSL++CV+ VRTQVY+AVNDK+LY+Q+V+DYLDSLKP++E+P Sbjct 1119 DALLAPLLSAGIFGAKPLQSLQVCVQTVRTQVYIAVNDKALYEQVVMDYLDSLKPRLEAP 1178 Query 357 NKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKL 415 +EE PK E+PK + V +KPVDVKPKIKACIDEVTTTLEETKFLTNKLLLF DINGKL Sbjct 1179 KQEELPKTEDPKVEEKSVVQKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFTDINGKL 1238 Query 416 YQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVA 475 YQDS+NMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+VP+ Sbjct 1239 YQDSKNMLRGEDMSFLEKDAPYMVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKVPID 1298 Query 476 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAE 535 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLP ETPN KEE+LGTVSWNLREMLAHAE Sbjct 1299 EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPPETPNAKEEILGTVSWNLREMLAHAE 1358 Query 536 ETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNE 595 ETRKLMP+C+DVRAIMATIQRKYKGIK+QEGIVDYGVRFFFYTSKEPVASIITKLNSLNE Sbjct 1359 ETRKLMPVCMDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNSLNE 1418 Query 596 PLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVE 655 PLVTMPIGYVTHG NLEEAARCMRSLKAP VVSVSSPDAVT YNGYLTSSSKTPEE+FVE Sbjct 1419 PLVTMPIGYVTHGFNLEEAARCMRSLKAPVVVSVSSPDAVTTYNGYLTSSSKTPEEHFVE 1478 Query 656 TTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSL 715 T SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEV+PLDKLKSLLSL Sbjct 1479 TVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPVEFHLDGEVIPLDKLKSLLSL 1538 Query 716 REVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLP 775 REVKTIKVFTTVDNTNLHT +VDMSMTYGQQ GPTYLDGADVTKIKPHVNHEGKTFFVLP Sbjct 1539 REVKTIKVFTTVDNTNLHTQLVDMSMTYGQQLGPTYLDGADVTKIKPHVNHEGKTFFVLP 1598 Query 776 SDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA 835 SDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA Sbjct 1599 SDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLA 1658 Query 836 LQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE 895 LQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE Sbjct 1659 LQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE 1718 Query 896 SAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQES 955 SAKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQQES Sbjct 1719 SAKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQES 1778 Query 956 SFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGP 1015 SFVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGP Sbjct 1779 SFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGP 1838 Query 1016 VTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPN 1075 VTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PN Sbjct 1839 VTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPN 1898 Query 1076 ASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKG 1135 ASFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SFKKG Sbjct 1899 ASFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKG 1958 Query 1136 AKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACE 1195 AKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNLACE Sbjct 1959 AKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNLACE 2018 Query 1196 SQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEE 1255 SQ TSEEVVENPTVQKE+IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAYVE Sbjct 2019 SQQATSEEVVENPTVQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAYVEN 2078 Query 1256 TSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQ 1315 TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYV+PFLG+ AV TSNC K+ VQ Sbjct 2079 TSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVRPFLGRAAVTTSNCAKRLVQ 2138 Query 1316 RVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPK 1375 RVF+NYMPYV+TLLFQLCTFTKSTNSRI+ASLPTTIAKNSVK VA+LCLD INYVKSPK Sbjct 2139 RVFNNYMPYVLTLLFQLCTFTKSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYVKSPK 2198 Query 1376 FSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFC 1435 FSKLFTI MWLLLLSICLGSL YVTA LGV LS+LG PSYC GVR+LY+NSSNVTTMDFC Sbjct 2199 FSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNLGAPSYCSGVRDLYLNSSNVTTMDFC 2258 Query 1436 QGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLG 1495 +G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLG Sbjct 2259 EGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTVLGLAAEWFLAYMLFTKFFYLLG 2318 Query 1496 LSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMD 1555 LSAIMQ FFGYFASHFISNSWLMW IISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMD Sbjct 2319 LSAIMQVFFGYFASHFISNSWLMWLIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMD 2378 Query 1556 GCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGS 1615 GCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFCAGS Sbjct 2379 GCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCAGS 2438 Query 1616 TFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFV 1675 TFISDEVARDLSLQFKRPIN TDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFV Sbjct 2439 TFISDEVARDLSLQFKRPINHTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFV 2498 Query 1676 NLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGD 1735 NLDNLRANN+KGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSDVGD Sbjct 2499 NLDNLRANNSKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSDVGD 2558 Query 1736 STEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVV 1795 STEVSVKMFDAYVDTFSATFSVPMEKLKALVATAH+ELAKGVALDGVLSTFVSAARQGVV Sbjct 2559 STEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHNELAKGVALDGVLSTFVSAARQGVV 2618 Query 1796 DTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ 1855 DTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ Sbjct 2619 DTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQ 2678 Query 1856 VAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG 1915 VAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG Sbjct 2679 VAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKG 2738 Query 1916 G 1916 G Sbjct 2739 G 2739 >ORF1ab polyprotein [Severe acute respiratory syndrome-related coronavirus] Sequence ID: WEG19510.1 Length: 7073 Range 1: 819 to 2740 Score:3606 bits(9351), Expect:0.0, Method:Compositional matrix adjust., Identities:1763/1924(92%), Positives:1831/1924(95%), Gaps:10/1924(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP KGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APTKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPD+EEDC+E E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDDEEDCDEYE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPE--- 173 +EEE +C HEYGTE+DY+GLPLEFGASTE EEEEEEDWL DA E Sbjct 939 EEEEVLEESCAHEYGTEEDYQGLPLEFGASTEMQ--VEEEEEEDWLGDATELSEHELESE 996 Query 174 PLPEEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKA 233 P PEEPVNQF GYLKLTDNVAIKC+DIVKEAQ+A PTVIVNAAN HLKHGGGVAGALNKA Sbjct 997 PTPEEPVNQFTGYLKLTDNVAIKCVDIVKEAQNANPTVIVNAANIHLKHGGGVAGALNKA 1056 Query 234 TNGAMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENF 293 TNGAMQ ESD+YI+ NGPL VGGSCLLSGHNLA+KCLHVVGPNLNAGED+QLLK AYENF Sbjct 1057 TNGAMQKESDDYIKLNGPLAVGGSCLLSGHNLAKKCLHVVGPNLNAGEDIQLLKAAYENF 1116 Query 294 NSQDVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKV 353 NSQD LLAPLLSAGIFGAKPLQSL++CV+ VRTQVY+AVNDK+LY+Q+V+DYLDSLKP+V Sbjct 1117 NSQDTLLAPLLSAGIFGAKPLQSLQVCVQTVRTQVYIAVNDKALYEQVVMDYLDSLKPRV 1176 Query 354 ESPNKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 412 E+P +EE PK E+PK + V +KPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN Sbjct 1177 EAPKQEEPPKTEDPKIEEKSVVQKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 1236 Query 413 GKLYQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEV 472 GKLY DS NMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+V Sbjct 1237 GKLYHDSHNMLRGEDMSFLEKDAPYMVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKV 1296 Query 473 PVAEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLA 532 PV EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPN KEE+LGTVSWNLREMLA Sbjct 1297 PVDEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNAKEEILGTVSWNLREMLA 1356 Query 533 HAEETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 592 HAEETRKLMPIC+DVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS Sbjct 1357 HAEETRKLMPICMDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 1416 Query 593 LNEPLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEY 652 LNEPLVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKT EE+ Sbjct 1417 LNEPLVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEH 1476 Query 653 FVETTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSL 712 FVET SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSL Sbjct 1477 FVETVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPVEFHLDGEVLPLDKLKSL 1536 Query 713 LSLREVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 772 LSLREVKTIKVFTTVDNTNLHT +VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF Sbjct 1537 LSLREVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 1596 Query 773 VLPSDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 832 VLPSDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV Sbjct 1597 VLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 1656 Query 833 LLALQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 892 LLALQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA Sbjct 1657 LLALQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 1716 Query 893 NLESAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQ 952 NLESAKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQ Sbjct 1717 NLESAKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQ 1776 Query 953 QESSFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEY 1012 QESSFVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEY Sbjct 1777 QESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEY 1836 Query 1013 KGPVTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQP 1072 KGPVTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP Sbjct 1837 KGPVTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQP 1896 Query 1073 MPNASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSF 1132 +PNASFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SF Sbjct 1897 LPNASFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASF 1956 Query 1133 KKGAKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNL 1192 KKGAKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNL Sbjct 1957 KKGAKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNL 2016 Query 1193 ACESQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAY 1252 ACESQ TSEEVVENPT+QKE++ECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAY Sbjct 2017 ACESQQPTSEEVVENPTIQKEVLECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAY 2076 Query 1253 VEETSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKK 1312 VE TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ A+ TSNC K+ Sbjct 2077 VENTSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAAITTSNCAKR 2136 Query 1313 CVQRVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVK 1372 Q VF+NYMPYV+TLLFQLCTFTKSTNSRI+ASLPTTIAKNSVK VA+LCLD INYVK Sbjct 2137 LAQCVFNNYMPYVLTLLFQLCTFTKSTNSRIRASLPTTIAKNSVKGVARLCLDAVINYVK 2196 Query 1373 SPKFSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTM 1432 SPKFSKLFTI MWLLLLSICLGSL YVTA LGV LS+ G PSYC GVRE Y+NSSNVTTM Sbjct 2197 SPKFSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNFGAPSYCSGVRESYLNSSNVTTM 2256 Query 1433 DFCQGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFY 1492 DFC+G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFY Sbjct 2257 DFCEGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWFLAYMLFTKFFY 2316 Query 1493 LLGLSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVH 1552 LLGLSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVH Sbjct 2317 LLGLSAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVH 2376 Query 1553 IMDGCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFC 1612 IMDGCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFC Sbjct 2377 IMDGCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFC 2436 Query 1613 AGSTFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLS 1672 GSTFISDEVARDLSLQFKRPINPTDQS+Y+VDSV VKNGALHLYFDKAGQKTYERHPLS Sbjct 2437 TGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVAVKNGALHLYFDKAGQKTYERHPLS 2496 Query 1673 HFVNLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSD 1732 HFVNLDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSD Sbjct 2497 HFVNLDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSD 2556 Query 1733 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 1792 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ Sbjct 2557 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 2616 Query 1793 GVVDTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 1852 GVVDTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI Sbjct 2617 GVVDTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 2676 Query 1853 NAQVAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 1912 NAQVAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS Sbjct 2677 NAQVAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 2736 Query 1913 LKGG 1916 LKGG Sbjct 2737 LKGG 2740 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47439.1 Length: 7067 Range 1: 819 to 2734 Score:3606 bits(9351), Expect:0.0, Method:Compositional matrix adjust., Identities:1781/1920(93%), Positives:1843/1920(95%), Gaps:8/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGT+VTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTDVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEE E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEEYE 938 Query 121 DEEETCE----HEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEEE E HEYGTEDDYKG PLEFGASTE HV+EEEEE+ E EPE EPLP Sbjct 939 DEEEIPEETCEHEYGTEDDYKGFPLEFGASTEIQHVDEEEEEDW----LEETEPEKEPLP 994 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQF GYLKLTDNVAIKC+DIVKEAQSAKPTVIVNAAN HLKHGGGVAGALNKATNG Sbjct 995 EEPVNQFTGYLKLTDNVAIKCVDIVKEAQSAKPTVIVNAANIHLKHGGGVAGALNKATNG 1054 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESDEYI+QNGPLTVGGSCLLSGHNLA+KC+HVVGPNLNAGEDVQLLK AYENFNSQ Sbjct 1055 AMQQESDEYIKQNGPLTVGGSCLLSGHNLAKKCMHVVGPNLNAGEDVQLLKAAYENFNSQ 1114 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLK+CVE V TQVY+AVNDKSLYDQ+VLDYLDSLKPKVESP Sbjct 1115 DVLLAPLLSAGIFGAKPLQSLKVCVETVHTQVYIAVNDKSLYDQVVLDYLDSLKPKVESP 1174 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 ++EEPKLEEPK QPVAEK DVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1175 KQKEEPKLEEPKVDQPVAEKSADVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1234 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLARALK+VP E Sbjct 1235 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLARALKKVPADE 1294 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFY+LPSETPNEKEE+LGTVSWNLREML HAEE Sbjct 1295 YITTYPGQGCAGYTLEEAKTALKKCKSAFYILPSETPNEKEEILGTVSWNLREMLDHAEE 1354 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMP+C+DV+AIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLN LNEP Sbjct 1355 TRKLMPVCMDVKAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNLLNEP 1414 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVT+PIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKT EE+F+ET Sbjct 1415 LVTIPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEHFIET 1474 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAG YRDWSYSGQRTELGVEFLKRGDK+VYHT GSPI+FHLDGEVL LDKLKSLLSLR Sbjct 1475 VSLAGMYRDWSYSGQRTELGVEFLKRGDKVVYHTVGSPIQFHLDGEVLLLDKLKSLLSLR 1534 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHT IVDMSMTYGQQFGP YLDGADVTKIKPH HEGKTFFVLPS Sbjct 1535 EVKTIKVFTTVDNTNLHTQIVDMSMTYGQQFGPIYLDGADVTKIKPHAKHEGKTFFVLPS 1594 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQ+GGLTSIKWADNNCYLSSVLLAL Sbjct 1595 DDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQIGGLTSIKWADNNCYLSSVLLAL 1654 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSN+TVGELGDVRETMTHLLQHANLES Sbjct 1655 QQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNRTVGELGDVRETMTHLLQHANLES 1714 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCK CGQK+TTL GVEAVMYMGTLSY++LKTGV+IPC+CGR+ATQYLVQQESS Sbjct 1715 AKRVLNVVCKTCGQKSTTLTGVEAVMYMGTLSYEKLKTGVTIPCICGRDATQYLVQQESS 1774 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQG F CANEYTGNYQCGHYTHITAKETLYR+DGAH+TKMSEYKGPV Sbjct 1775 FVMMSAPPAEYKLQQGTFFCANEYTGNYQCGHYTHITAKETLYRIDGAHITKMSEYKGPV 1834 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1835 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1894 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1895 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGA 1954 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQTTNKTTYKPN WCLRCLWSTKPVDTSNSFE L VEDTQGMDNLACES Sbjct 1955 KLLHKPIIWHINQTTNKTTYKPNTWCLRCLWSTKPVDTSNSFEALAVEDTQGMDNLACES 2014 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QT TSEEVVENPTVQKE+IECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET Sbjct 2015 QTPTSEEVVENPTVQKEVIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 2074 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELS+ALGLKTLATHGAAAINSVPWSKILAYVKPFLGQ V T+NCIK+CVQR Sbjct 2075 SITIKKPNELSIALGLKTLATHGAAAINSVPWSKILAYVKPFLGQVTVTTTNCIKRCVQR 2134 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFT+STNSRI+ASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2135 VFNNYMPYVITLLFQLCTFTRSTNSRIRASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2194 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSL YVTA GV LS+LG+PSYC+G+R+LY+NS NVT+MDFC+ Sbjct 2195 SKLFTIAMWLLLLSICLGSLVYVTAAFGVLLSNLGMPSYCNGIRDLYVNSPNVTSMDFCE 2254 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLGL Sbjct 2255 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTLLGLAAEWFLAYMLFTKFFYLLGL 2314 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMY+FFA FYYVWKSYVHIMDG Sbjct 2315 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYLFFAFFYYVWKSYVHIMDG 2374 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST Sbjct 2375 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 2434 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKN AL+LYFDKAGQKTYERH LSHFVN Sbjct 2435 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNSALYLYFDKAGQKTYERHTLSHFVN 2494 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQA +SDVGDS Sbjct 2495 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQAFISDVGDS 2554 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGV LDGVLSTFVSAARQGVVD Sbjct 2555 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVVLDGVLSTFVSAARQGVVD 2614 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2615 TDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2674 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVN ITTKISLKGG Sbjct 2675 AKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNAITTKISLKGG 2734 >ORF1ab [Coronavirus BtRs-BetaCoV/YN2018D] Sequence ID: QDF43834.1 Length: 7073 Range 1: 819 to 2740 Score:3606 bits(9351), Expect:0.0, Method:Compositional matrix adjust., Identities:1761/1924(92%), Positives:1830/1924(95%), Gaps:10/1924(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP KGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APTKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPD+EEDC+E E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDDEEDCDEYE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPE--- 173 +EEE +C HEYGTE+DY+GLPLEFGASTE EEEEEEDWL DA E Sbjct 939 EEEEVLEESCAHEYGTEEDYQGLPLEFGASTEMQ--VEEEEEEDWLGDATELSEHELESE 996 Query 174 PLPEEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKA 233 P PEEPVNQF GYLKLTDNVAIKC+DIVKEAQ+A PTVIVNAAN HLKHGGGVAGALNKA Sbjct 997 PTPEEPVNQFTGYLKLTDNVAIKCVDIVKEAQNANPTVIVNAANIHLKHGGGVAGALNKA 1056 Query 234 TNGAMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENF 293 TNGAMQ ESD+YI+ NGPL VGGSCLLSGHNLA+KCLHVVGPNLNAGED+QLLK AYENF Sbjct 1057 TNGAMQKESDDYIKLNGPLAVGGSCLLSGHNLAKKCLHVVGPNLNAGEDIQLLKAAYENF 1116 Query 294 NSQDVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKV 353 NSQD LLAPLLSAGIFGAKPLQSL++CV+ VRTQVY+AVNDK+LY+Q+V+DYLDSLKP+V Sbjct 1117 NSQDTLLAPLLSAGIFGAKPLQSLQVCVQTVRTQVYIAVNDKALYEQVVMDYLDSLKPRV 1176 Query 354 ESPNKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 412 E+P +EE PK E+PK + V +KPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN Sbjct 1177 EAPKQEEPPKTEDPKIEEKSVVQKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 1236 Query 413 GKLYQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEV 472 GKLY DS NMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+V Sbjct 1237 GKLYHDSHNMLRGEDMSFLEKDAPYMVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKV 1296 Query 473 PVAEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLA 532 PV EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPN KEE+LGTVSWNLREMLA Sbjct 1297 PVDEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNAKEEILGTVSWNLREMLA 1356 Query 533 HAEETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 592 HAEETRKLMPIC+DVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS Sbjct 1357 HAEETRKLMPICMDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 1416 Query 593 LNEPLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEY 652 LNEPLVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKT EE+ Sbjct 1417 LNEPLVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEH 1476 Query 653 FVETTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSL 712 FVET SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSL Sbjct 1477 FVETVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPVEFHLDGEVLPLDKLKSL 1536 Query 713 LSLREVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 772 LSLREVKTIKVFTTVDNTNLHT +VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF Sbjct 1537 LSLREVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 1596 Query 773 VLPSDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 832 VLPSDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV Sbjct 1597 VLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 1656 Query 833 LLALQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 892 LLALQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA Sbjct 1657 LLALQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 1716 Query 893 NLESAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQ 952 NLESAKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQ Sbjct 1717 NLESAKRVLNVVCKHCGQKTTTLMGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQ 1776 Query 953 QESSFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEY 1012 QESSFVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEY Sbjct 1777 QESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEY 1836 Query 1013 KGPVTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQP 1072 KGPVTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP Sbjct 1837 KGPVTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQP 1896 Query 1073 MPNASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSF 1132 +PNASFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SF Sbjct 1897 LPNASFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASF 1956 Query 1133 KKGAKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNL 1192 KKGAKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNL Sbjct 1957 KKGAKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNL 2016 Query 1193 ACESQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAY 1252 ACESQ TSEEVVENPT+QKE++ECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAY Sbjct 2017 ACESQQPTSEEVVENPTIQKEVLECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAY 2076 Query 1253 VEETSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKK 1312 VE TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ A+ TSNC K+ Sbjct 2077 VENTSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAAITTSNCAKR 2136 Query 1313 CVQRVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVK 1372 Q VF+NYMPYV+TLLFQLCTFTKSTNSRI+ASLPTTIAKNSVK VA+LCLD INYVK Sbjct 2137 LAQCVFNNYMPYVLTLLFQLCTFTKSTNSRIRASLPTTIAKNSVKGVARLCLDAVINYVK 2196 Query 1373 SPKFSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTM 1432 SPKFSKLFTI MWLLLLSICLGSL YVTA LGV LS+ G PSYC GVRE Y+NSSNVTTM Sbjct 2197 SPKFSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNFGAPSYCSGVRESYLNSSNVTTM 2256 Query 1433 DFCQGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFY 1492 DFC+G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFY Sbjct 2257 DFCEGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWFLAYMLFTKFFY 2316 Query 1493 LLGLSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVH 1552 LLGLSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVH Sbjct 2317 LLGLSAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVH 2376 Query 1553 IMDGCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFC 1612 IMDGCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFC Sbjct 2377 IMDGCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFC 2436 Query 1613 AGSTFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLS 1672 GSTFISDEVARDLSLQFKRPINPTDQS+Y+VDSV VKNGALHLYFDKAGQKTYERHPLS Sbjct 2437 TGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVAVKNGALHLYFDKAGQKTYERHPLS 2496 Query 1673 HFVNLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSD 1732 HFVNLDNLRANNTKGSLPINVIVFDGKSKC+ESAA+SASVYYSQLMCQPILLLDQALVSD Sbjct 2497 HFVNLDNLRANNTKGSLPINVIVFDGKSKCDESAARSASVYYSQLMCQPILLLDQALVSD 2556 Query 1733 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 1792 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLK LVATAHSELAKGVALDGVLSTFVSAARQ Sbjct 2557 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKVLVATAHSELAKGVALDGVLSTFVSAARQ 2616 Query 1793 GVVDTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 1852 GVVDTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI Sbjct 2617 GVVDTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 2676 Query 1853 NAQVAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 1912 NAQVAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS Sbjct 2677 NAQVAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 2736 Query 1913 LKGG 1916 LKGG Sbjct 2737 LKGG 2740 >non-structural polyprotein 1ab [Bat SARS-like coronavirus RsSHC014] Sequence ID: AGZ48805.1 Length: 7073 Range 1: 819 to 2740 Score:3605 bits(9349), Expect:0.0, Method:Compositional matrix adjust., Identities:1760/1924(91%), Positives:1834/1924(95%), Gaps:10/1924(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP+KGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APIKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPD+EEDC+ECE Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDDEEDCDECE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPE--- 173 +EEE +C HEYGTE+DY+GLPLEFGASTE EEEEEEDWL DA E Sbjct 939 EEEEVLEESCAHEYGTEEDYQGLPLEFGASTEMQ--VEEEEEEDWLGDATELSEHELESE 996 Query 174 PLPEEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKA 233 P PEEPVNQF GYLKLTDNVAIKC+DIVKEAQ+A PTVIVNAAN HLKHGGGVAGALNKA Sbjct 997 PTPEEPVNQFTGYLKLTDNVAIKCVDIVKEAQNANPTVIVNAANIHLKHGGGVAGALNKA 1056 Query 234 TNGAMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENF 293 TNGAMQ ESD+YI+ NGPL VGGSCLLSGHNLA+KCLHVVGPNLNAGED+QLLK AYENF Sbjct 1057 TNGAMQKESDDYIKLNGPLAVGGSCLLSGHNLAKKCLHVVGPNLNAGEDIQLLKAAYENF 1116 Query 294 NSQDVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKV 353 NSQD LLAPLLSAGIFGAKPLQSL++CV+ VRTQVY+AVNDK+LY+Q+V+DYLDSLKP+V Sbjct 1117 NSQDTLLAPLLSAGIFGAKPLQSLQVCVQTVRTQVYIAVNDKALYEQVVMDYLDSLKPRV 1176 Query 354 ESPNKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 412 E+P +EE P+ E+PK + V +KP+DVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN Sbjct 1177 EAPKQEEPPRTEDPKIEEKSVVQKPIDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 1236 Query 413 GKLYQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEV 472 GKLY DS NMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+V Sbjct 1237 GKLYHDSHNMLRGEDMSFLEKDAPYMVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKV 1296 Query 473 PVAEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLA 532 PV EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPN KEE+LGTVSWNLREMLA Sbjct 1297 PVDEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNAKEEILGTVSWNLREMLA 1356 Query 533 HAEETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 592 HAEETRKLMPIC+DVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASII KLNS Sbjct 1357 HAEETRKLMPICMDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIIMKLNS 1416 Query 593 LNEPLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEY 652 LNEPLVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKTPEE+ Sbjct 1417 LNEPLVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTPEEH 1476 Query 653 FVETTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSL 712 FVET SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSL Sbjct 1477 FVETVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPVEFHLDGEVLPLDKLKSL 1536 Query 713 LSLREVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 772 LSLREVKTIKVFTTVDNTNLHT +VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF Sbjct 1537 LSLREVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 1596 Query 773 VLPSDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 832 VLPSDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV Sbjct 1597 VLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 1656 Query 833 LLALQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 892 LLALQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA Sbjct 1657 LLALQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 1716 Query 893 NLESAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQ 952 NLESAKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQ Sbjct 1717 NLESAKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQ 1776 Query 953 QESSFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEY 1012 QESSFVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEY Sbjct 1777 QESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEY 1836 Query 1013 KGPVTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQP 1072 KGPVTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP Sbjct 1837 KGPVTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQP 1896 Query 1073 MPNASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSF 1132 +PNASFDNFKLTCSNTKFAD+LNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SF Sbjct 1897 LPNASFDNFKLTCSNTKFADNLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASF 1956 Query 1133 KKGAKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNL 1192 KKGAKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNL Sbjct 1957 KKGAKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNL 2016 Query 1193 ACESQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAY 1252 ACESQ TSE VVENPT+QKE++ECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAY Sbjct 2017 ACESQQPTSEAVVENPTIQKEVLECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAY 2076 Query 1253 VEETSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKK 1312 VE TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ AV TSNC K+ Sbjct 2077 VENTSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAAVTTSNCAKR 2136 Query 1313 CVQRVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVK 1372 VQR+F+NYMPYV+TLLFQLCTFTKSTNSRI+ASLPTTIAKNSVK VA+LCLD INYVK Sbjct 2137 LVQRMFNNYMPYVLTLLFQLCTFTKSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYVK 2196 Query 1373 SPKFSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTM 1432 SPKFSKLFTI MWLLLLSICLGSL YVTA LGV LS++G PSYC GVRE Y+NSSNVTTM Sbjct 2197 SPKFSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNVGAPSYCSGVRESYLNSSNVTTM 2256 Query 1433 DFCQGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFY 1492 DFC+G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW+LAYMLFTKFFY Sbjct 2257 DFCEGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWVLAYMLFTKFFY 2316 Query 1493 LLGLSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVH 1552 LLGLSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVH Sbjct 2317 LLGLSAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVH 2376 Query 1553 IMDGCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFC 1612 IMDGCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFC Sbjct 2377 IMDGCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFC 2436 Query 1613 AGSTFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLS 1672 GSTFISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLS Sbjct 2437 TGSTFISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLS 2496 Query 1673 HFVNLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSD 1732 HFVNLDNLRANNTKGSLPINVIVFDGKSKC+ESAA+SASVYYSQLMCQPILLLDQ LVSD Sbjct 2497 HFVNLDNLRANNTKGSLPINVIVFDGKSKCDESAARSASVYYSQLMCQPILLLDQVLVSD 2556 Query 1733 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 1792 VG STEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ Sbjct 2557 VGGSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 2616 Query 1793 GVVDTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 1852 GVVDTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI Sbjct 2617 GVVDTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 2676 Query 1853 NAQVAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 1912 NAQVAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS Sbjct 2677 NAQVAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 2736 Query 1913 LKGG 1916 LKGG Sbjct 2737 LKGG 2740 >nsp3 [SARS coronavirus Tor2] Sequence ID: NP_828862.2 Length: 1922 >nsp3 [SARS coronavirus Tor2] Sequence ID: YP_009944368.1 Length: 1922 Range 1: 1 to 1922 Score:3605 bits(9347), Expect:0.0, Method:Compositional matrix adjust., Identities:1759/1923(91%), Positives:1829/1923(95%), Gaps:8/1923(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP+KGVTFGEDTV EVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 1 APIKGVTFGEDTVWEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEE SSRMYCSFYPPDEEE+ + Sbjct 61 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEENFSSRMYCSFYPPDEEEEDDAEC 120 Query 121 DEEETCE---HEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEP---EPEP 174 +EEE E HEYGTEDDY+GLPLEFGAS ET VEEEEEE DWLDD E EPEP Sbjct 121 EEEEIDETCEHEYGTEDDYQGLPLEFGASAETVRVEEEEEE-DWLDDTTEQSEIEPEPEP 179 Query 175 LPEEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKAT 234 PEEPVNQF GYLKLTDNVAIKC+DIVKEAQSA P VIVNAAN HLKHGGGVAGALNKAT Sbjct 180 TPEEPVNQFTGYLKLTDNVAIKCVDIVKEAQSANPMVIVNAANIHLKHGGGVAGALNKAT 239 Query 235 NGAMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFN 294 NGAMQ ESD+YI+ NGPLTVGGSCLLSGHNLA+KCLHVVGPNLNAGED+QLLK AYENFN Sbjct 240 NGAMQKESDDYIKLNGPLTVGGSCLLSGHNLAKKCLHVVGPNLNAGEDIQLLKAAYENFN 299 Query 295 SQDVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVE 354 SQD+LLAPLLSAGIFGAKPLQSL++CV+ VRTQVY+AVNDK+LY+Q+V+DYLD+LKP+VE Sbjct 300 SQDILLAPLLSAGIFGAKPLQSLQVCVQTVRTQVYIAVNDKALYEQVVMDYLDNLKPRVE 359 Query 355 SPNKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADING 413 +P +EE P E+ K + V +KPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADING Sbjct 360 APKQEEPPNTEDSKTEEKSVVQKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADING 419 Query 414 KLYQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVP 473 KLY DSQNMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+VP Sbjct 420 KLYHDSQNMLRGEDMSFLEKDAPYMVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKVP 479 Query 474 VAEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAH 533 V EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSE PN KEE+LGTVSWNLREMLAH Sbjct 480 VDEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSEAPNAKEEILGTVSWNLREMLAH 539 Query 534 AEETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSL 593 AEETRKLMPIC+DVRAIMATIQRKYKGIK+QEGIVDYGVRFFFYTSKEPVASIITKLNSL Sbjct 540 AEETRKLMPICMDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNSL 599 Query 594 NEPLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYF 653 NEPLVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKT EE+F Sbjct 600 NEPLVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEHF 659 Query 654 VETTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLL 713 VET SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVL LDKLKSLL Sbjct 660 VETVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPVEFHLDGEVLSLDKLKSLL 719 Query 714 SLREVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFV 773 SLREVKTIKVFTTVDNTNLHT +VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFV Sbjct 720 SLREVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFV 779 Query 774 LPSDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVL 833 LPSDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVL Sbjct 780 LPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVL 839 Query 834 LALQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHAN 893 LALQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHAN Sbjct 840 LALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHAN 899 Query 894 LESAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQ 953 LESAKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQQ Sbjct 900 LESAKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQ 959 Query 954 ESSFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYK 1013 ESSFVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYK Sbjct 960 ESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYK 1019 Query 1014 GPVTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPM 1073 GPVTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+ Sbjct 1020 GPVTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPL 1079 Query 1074 PNASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFK 1133 PNASFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SFK Sbjct 1080 PNASFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASFK 1139 Query 1134 KGAKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLA 1193 KGAKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNLA Sbjct 1140 KGAKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNLA 1199 Query 1194 CESQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYV 1253 CESQ TSEEVVENPT+QKE+IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAYV Sbjct 1200 CESQQPTSEEVVENPTIQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAYV 1259 Query 1254 EETSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKC 1313 E TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ A+ TSNC K+ Sbjct 1260 ENTSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAAITTSNCAKRL 1319 Query 1314 VQRVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKS 1373 QRVF+NYMPYV TLLFQLCTFTKSTNSRI+ASLPTTIAKNSVKSVAKLCLD INYVKS Sbjct 1320 AQRVFNNYMPYVFTLLFQLCTFTKSTNSRIRASLPTTIAKNSVKSVAKLCLDAGINYVKS 1379 Query 1374 PKFSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMD 1433 PKFSKLFTI MWLLLLSICLGSL VTA GV LS+ G PSYC+GVRELY+NSSNVTTMD Sbjct 1380 PKFSKLFTIAMWLLLLSICLGSLICVTAAFGVLLSNFGAPSYCNGVRELYLNSSNVTTMD 1439 Query 1434 FCQGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYL 1493 FC+G FPCS+CLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW+LAYMLFTKFFYL Sbjct 1440 FCEGSFPCSICLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWVLAYMLFTKFFYL 1499 Query 1494 LGLSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHI 1553 LGLSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVHI Sbjct 1500 LGLSAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHI 1559 Query 1554 MDGCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCA 1613 MDGCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFC Sbjct 1560 MDGCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCT 1619 Query 1614 GSTFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSH 1673 GSTFISDEVARDLSLQFKRPINPTDQS+Y+VDSV VKNGALHLYFDKAGQKTYERHPLSH Sbjct 1620 GSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVAVKNGALHLYFDKAGQKTYERHPLSH 1679 Query 1674 FVNLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDV 1733 FVNLDNLRANNTKGSLPINVIVFDGKSKC+ESA+KSASVYYSQLMCQPILLLDQALVSDV Sbjct 1680 FVNLDNLRANNTKGSLPINVIVFDGKSKCDESASKSASVYYSQLMCQPILLLDQALVSDV 1739 Query 1734 GDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQG 1793 GDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQG Sbjct 1740 GDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQG 1799 Query 1794 VVDTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHIN 1853 VVDTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHIN Sbjct 1800 VVDTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHIN 1859 Query 1854 AQVAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISL 1913 AQVAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISL Sbjct 1860 AQVAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISL 1919 Query 1914 KGG 1916 KGG Sbjct 1920 KGG 1922 >ORF1ab polyprotein [BtRf-BetaCoV/SX2013] Sequence ID: AIA62299.1 Length: 7068 Range 1: 819 to 2735 Score:3605 bits(9347), Expect:0.0, Method:Compositional matrix adjust., Identities:1786/1920(93%), Positives:1845/1920(96%), Gaps:7/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGE+TVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGENTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEE E Sbjct 879 AVVKTLQPVSDLLTKMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEEYE 938 Query 121 DE----EETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 E + TCEHEYGTEDDYKGLPLEFG+STE V++EEE+ LDDA EAEPEPEPLP Sbjct 939 GEEEVPDGTCEHEYGTEDDYKGLPLEFGSSTEIQQVDDEEEDW--LDDAGEAEPEPEPLP 996 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQF GY KLTDNVAIKC+DIVKEAQSAKP VIVNAAN HLKHGGGVAGALNKATNG Sbjct 997 EEPVNQFTGYFKLTDNVAIKCVDIVKEAQSAKPAVIVNAANIHLKHGGGVAGALNKATNG 1056 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESD+YI++NGPLTVGGSCLLSGHNLA+KC+HVVGPNLNAGEDVQLLK AY NFNSQ Sbjct 1057 AMQQESDDYIKRNGPLTVGGSCLLSGHNLAKKCMHVVGPNLNAGEDVQLLKAAYNNFNSQ 1116 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE+VRTQVYLAVND+SLYDQ+VLDYLDSLKPKVESP Sbjct 1117 DVLLAPLLSAGIFGAKPLQSLKMCVEVVRTQVYLAVNDRSLYDQVVLDYLDSLKPKVESP 1176 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 KEE PKLEEPKA QP AEKPVDVKPKIKAC++EVTTTLEETK LT LLLFADINGKLY Sbjct 1177 KKEENPKLEEPKAKQP-AEKPVDVKPKIKACVEEVTTTLEETKLLTRNLLLFADINGKLY 1235 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 DSQNMLRGEDMSFLEKDAPY+VGDVITSGDITCVIIPAKK+GGTTEMLA+ALK+VPV E Sbjct 1236 PDSQNMLRGEDMSFLEKDAPYVVGDVITSGDITCVIIPAKKAGGTTEMLAKALKKVPVCE 1295 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALK+CKSAFYVLPS+TPN K+E+LGTVSWNLREMLAHAEE Sbjct 1296 YITTYPGQGCAGYTLEEAKTALKRCKSAFYVLPSKTPNVKDEILGTVSWNLREMLAHAEE 1355 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPIC+D+RAIMATIQRKYKGIK+QEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1356 TRKLMPICMDIRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1415 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 L+TMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKTPEE+F+ET Sbjct 1416 LITMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTPEEHFIET 1475 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAG+YRDWSYSGQR ELGVEFLKRGDKIVYHT PIEFHLDGEVLPLDKLKSLLSLR Sbjct 1476 ISLAGTYRDWSYSGQRIELGVEFLKRGDKIVYHTIEKPIEFHLDGEVLPLDKLKSLLSLR 1535 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHT +VDMS+TYGQ FGPTYLDGADVTK+KPHVNHEGKTFFVLPS Sbjct 1536 EVKTIKVFTTVDNTNLHTQLVDMSVTYGQHFGPTYLDGADVTKVKPHVNHEGKTFFVLPS 1595 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHT+DESFLGRYMSAL+HTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1596 DDTLRSEAFEYYHTLDESFLGRYMSALSHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1655 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE Sbjct 1656 QQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLEF 1715 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLN+VCKHCGQKTTTL GVEAVMYMGTLSYDELKTGVSIPCVCGR ATQYLVQQESS Sbjct 1716 AKRVLNLVCKHCGQKTTTLTGVEAVMYMGTLSYDELKTGVSIPCVCGRGATQYLVQQESS 1775 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGPV Sbjct 1776 FVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV 1835 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1836 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1895 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSN KFADDLNQMTGFKKPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1896 SFDNFKLTCSNIKFADDLNQMTGFKKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGA 1955 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQTTNKTTYKPN WCLRCLWSTKPV+TSNSFEVL VE TQGMDNLACES Sbjct 1956 KLLHKPIIWHINQTTNKTTYKPNTWCLRCLWSTKPVETSNSFEVLEVEGTQGMDNLACES 2015 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 Q TSEEVVENPTVQKE+IECDVKTTEVVGNVILKPS+EGVKVTQEL HEDLMAAYVE T Sbjct 2016 QPPTSEEVVENPTVQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELDHEDLMAAYVENT 2075 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKIL YVKPFLGQ V TSNCIKKCVQR Sbjct 2076 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILTYVKPFLGQATVTTSNCIKKCVQR 2135 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 +F+NYMPYVITLL QLCTFTKSTNSRI+ASLPTTIAKNSVKSVAKLCLDVCINYVKSPK Sbjct 2136 IFNNYMPYVITLLLQLCTFTKSTNSRIRASLPTTIAKNSVKSVAKLCLDVCINYVKSPKS 2195 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSLTYV A LGV LS+LG+PSYC GVR+LYINSSNVT MDFC+ Sbjct 2196 SKLFTIAMWLLLLSICLGSLTYVIAALGVFLSNLGIPSYCGGVRDLYINSSNVTIMDFCE 2255 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEW LAYMLFTKFFYLLGL Sbjct 2256 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWFLAYMLFTKFFYLLGL 2315 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2316 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2375 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRA RVECTTIVNG+KRSFYVYANGGRGFCKAHNWNCLNCDTFC GST Sbjct 2376 CTSSTCMMCYKRNRAMRVECTTIVNGMKRSFYVYANGGRGFCKAHNWNCLNCDTFCTGST 2435 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLSHFVN Sbjct 2436 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSHFVN 2495 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2496 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2555 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2556 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2615 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2616 TDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2675 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2676 AKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2735 >ORF1ab polyprotein [Sarbecovirus sp.] Sequence ID: QZX47569.1 Length: 7067 Range 1: 819 to 2734 Score:3604 bits(9345), Expect:0.0, Method:Compositional matrix adjust., Identities:1778/1920(93%), Positives:1842/1920(95%), Gaps:8/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGEDTVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGT+VTEFACVVAE Sbjct 819 APVKGVTFGEDTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTDVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEE E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEEYE 938 Query 121 DEEETCE----HEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 DEEE E HEYGTEDDYKG PLEFGASTE HV+EEEEE+ EAEPE EPLP Sbjct 939 DEEEIPEETCEHEYGTEDDYKGFPLEFGASTEIQHVDEEEEEDW----LEEAEPEKEPLP 994 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQF GYLKLTDNVAIKC+DIVKEAQSAKPTVIVNAAN HLKHGGGVAGALNKATNG Sbjct 995 EEPVNQFTGYLKLTDNVAIKCVDIVKEAQSAKPTVIVNAANIHLKHGGGVAGALNKATNG 1054 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESDEYI+QNGPLTVGGSCLLSGHNLA+KC+HVVGPNLNAGEDVQLLK AYENFNSQ Sbjct 1055 AMQQESDEYIKQNGPLTVGGSCLLSGHNLAKKCMHVVGPNLNAGEDVQLLKAAYENFNSQ 1114 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLK+CVE V TQVY+AVNDKSLYDQ+VLDYLDSLKPKVESP Sbjct 1115 DVLLAPLLSAGIFGAKPLQSLKVCVETVHTQVYIAVNDKSLYDQVVLDYLDSLKPKVESP 1174 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 ++EEPKLEEPK QPVA K DVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY Sbjct 1175 KQKEEPKLEEPKVDQPVAAKSADVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 1234 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKK+GGTTEMLA+ALK+VP E Sbjct 1235 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKAGGTTEMLAKALKKVPADE 1294 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALKKCKSAFY+LPSETPNEKEE+LGTVSWNLREML HAEE Sbjct 1295 YITTYPGQGCAGYTLEEAKTALKKCKSAFYILPSETPNEKEEILGTVSWNLREMLDHAEE 1354 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMP+C+DV+AIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLN LNEP Sbjct 1355 TRKLMPVCMDVKAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNLLNEP 1414 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKT EE+F+ET Sbjct 1415 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEHFIET 1474 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAG YRDWSYSGQRTELGVEFLKRGDK+VYHT GSPI+FHLDGEVL LDKLKSLLSLR Sbjct 1475 VSLAGMYRDWSYSGQRTELGVEFLKRGDKVVYHTVGSPIQFHLDGEVLLLDKLKSLLSLR 1534 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHT IVDMSMTYGQQFGP YLDGADVTKIKPH HEGKTFFVLPS Sbjct 1535 EVKTIKVFTTVDNTNLHTQIVDMSMTYGQQFGPIYLDGADVTKIKPHAKHEGKTFFVLPS 1594 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHT+DESFLGRYMSALNHTK+WKFPQ+GGLTSIKWADNNCYLSSVLLAL Sbjct 1595 DDTLRSEAFEYYHTLDESFLGRYMSALNHTKRWKFPQIGGLTSIKWADNNCYLSSVLLAL 1654 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSN+TVGELGDVRETMTHLLQHANLES Sbjct 1655 QQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNRTVGELGDVRETMTHLLQHANLES 1714 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLNVVCK CGQK+TTL GVEAVMYMGTLSY++LKTGV+IPC+CGR+ATQYLVQQESS Sbjct 1715 AKRVLNVVCKTCGQKSTTLTGVEAVMYMGTLSYEKLKTGVTIPCICGRDATQYLVQQESS 1774 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPP+EY LQQGAFLCANEYTG+YQCGHYTH+TAKETLYR+DGAHLTKMSEYKGPV Sbjct 1775 FVMMSAPPSEYTLQQGAFLCANEYTGSYQCGHYTHVTAKETLYRIDGAHLTKMSEYKGPV 1834 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDG YTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1835 TDVFYKETSYTTTIKPVSYKLDGAIYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1894 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSNTKFADDLNQMTGFKKPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1895 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGA 1954 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQTTNKTTYKPN WCLRCLWSTKPVDTSNSFE L VEDTQGMDNLACES Sbjct 1955 KLLHKPIIWHINQTTNKTTYKPNTWCLRCLWSTKPVDTSNSFEALAVEDTQGMDNLACES 2014 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 QT TSEEVVENPTVQKE+IECDVKTTEVVGNVILKPSEEGVKV QELGHEDLMAAYVEET Sbjct 2015 QTPTSEEVVENPTVQKEVIECDVKTTEVVGNVILKPSEEGVKVIQELGHEDLMAAYVEET 2074 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELS+ALGLKTLATHGA AINSVPWSKILAYVKPFLGQ V T+NCIK+CVQR Sbjct 2075 SITIKKPNELSIALGLKTLATHGAVAINSVPWSKILAYVKPFLGQVTVTTTNCIKRCVQR 2134 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 VF+NYMPYVITLLFQLCTFT+STNSRI+ASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF Sbjct 2135 VFNNYMPYVITLLFQLCTFTRSTNSRIRASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 2194 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSL YVTA GV LS+LG+PSYC+G+R+LY+NSSNVT+M+FC+ Sbjct 2195 SKLFTIAMWLLLLSICLGSLVYVTAAFGVLLSNLGMPSYCNGIRDLYVNSSNVTSMNFCE 2254 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFYLLGL Sbjct 2255 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTLLGLAAEWFLAYMLFTKFFYLLGL 2314 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMY+FFA FYYVWKSYVHIMDG Sbjct 2315 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYLFFAFFYYVWKSYVHIMDG 2374 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST Sbjct 2375 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 2434 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERH LSHFVN Sbjct 2435 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHTLSHFVN 2494 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2495 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2554 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALV TAHSELAKGV LDGVLSTFVSAARQGVVD Sbjct 2555 TEVSVKMFDAYVDTFSATFSVPMEKLKALVTTAHSELAKGVVLDGVLSTFVSAARQGVVD 2614 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2615 TDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2674 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVN ITTKISLKGG Sbjct 2675 AKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNAITTKISLKGG 2734 >ORF1ab polyprotein [Bat Coronavirus RsYN20] Sequence ID: WCC63994.1 Length: 7073 Range 1: 819 to 2740 Score:3603 bits(9343), Expect:0.0, Method:Compositional matrix adjust., Identities:1769/1924(92%), Positives:1839/1924(95%), Gaps:10/1924(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP KGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APTKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLL MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDC+E E Sbjct 879 AVVKTLQPVSDLLNNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCDEYE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIE---AEPEPE 173 +EEE +C HEYGTE+DY+GLPLEFGASTE EEE EEDWL DA E E EPE Sbjct 939 EEEEVTEESCAHEYGTEEDYQGLPLEFGASTEMQ--VEEEAEEDWLGDATELSEHELEPE 996 Query 174 PLPEEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKA 233 P PEE VNQF GYLKLTDNVAIKC+DIVKEAQ+A PTVIVNAAN HLKHGGGVAGALNKA Sbjct 997 PTPEESVNQFTGYLKLTDNVAIKCVDIVKEAQNANPTVIVNAANIHLKHGGGVAGALNKA 1056 Query 234 TNGAMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENF 293 TNGAMQ ESD+YI+ NGPLTVGGSCLLSGHNLA+KCLHVVGPNLNAGED+QLLK AYENF Sbjct 1057 TNGAMQEESDDYIKLNGPLTVGGSCLLSGHNLAKKCLHVVGPNLNAGEDIQLLKAAYENF 1116 Query 294 NSQDVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKV 353 NSQD LLAPLLSAGIFGAKPLQSL++CV+ VRTQVY+AVNDK+LY+Q+V+DYLDSLKP+V Sbjct 1117 NSQDTLLAPLLSAGIFGAKPLQSLQVCVQTVRTQVYIAVNDKALYEQVVMDYLDSLKPRV 1176 Query 354 ESPNKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 412 E+P +EE P+ E+PK + V +KP+DVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN Sbjct 1177 EAPKQEEPPRTEDPKIEEKSVVQKPIDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 1236 Query 413 GKLYQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEV 472 GKLY DS NMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+V Sbjct 1237 GKLYHDSHNMLRGEDMSFLEKDAPYMVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKV 1296 Query 473 PVAEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLA 532 PV EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPN KEE+LGTVSWNLREMLA Sbjct 1297 PVDEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNAKEEILGTVSWNLREMLA 1356 Query 533 HAEETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 592 HAEETRKLMPIC+DVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS Sbjct 1357 HAEETRKLMPICMDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 1416 Query 593 LNEPLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEY 652 LNEPLVTMPIGYVTHG LEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKTPEE+ Sbjct 1417 LNEPLVTMPIGYVTHGFTLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTPEEH 1476 Query 653 FVETTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSL 712 FVET SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSL Sbjct 1477 FVETVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPVEFHLDGEVLPLDKLKSL 1536 Query 713 LSLREVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 772 LSLREVKTIKVFTTVDNTNLHTH+VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF Sbjct 1537 LSLREVKTIKVFTTVDNTNLHTHLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 1596 Query 773 VLPSDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 832 VLPSDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV Sbjct 1597 VLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 1656 Query 833 LLALQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 892 LLALQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA Sbjct 1657 LLALQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 1716 Query 893 NLESAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQ 952 NLESAKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSI CVCGR+ATQYLVQ Sbjct 1717 NLESAKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDNLKTGVSILCVCGRDATQYLVQ 1776 Query 953 QESSFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEY 1012 QESSFVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEY Sbjct 1777 QESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEY 1836 Query 1013 KGPVTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQP 1072 KGPVTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP Sbjct 1837 KGPVTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQP 1896 Query 1073 MPNASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSF 1132 +PNASFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SF Sbjct 1897 LPNASFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASF 1956 Query 1133 KKGAKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNL 1192 KKGAKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNL Sbjct 1957 KKGAKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNL 2016 Query 1193 ACESQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAY 1252 ACESQ TSEEVVENPT+QKE++ECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAY Sbjct 2017 ACESQQPTSEEVVENPTIQKEVLECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAY 2076 Query 1253 VEETSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKK 1312 VE TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ AV TSNC K+ Sbjct 2077 VENTSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAAVTTSNCAKR 2136 Query 1313 CVQRVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVK 1372 VQR+F+NYMPYV+TLLFQLCTFTKSTNSRI+ASLPTTIAKNSVK VA+LCLD INYVK Sbjct 2137 LVQRMFNNYMPYVLTLLFQLCTFTKSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYVK 2196 Query 1373 SPKFSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTM 1432 SPKFSKLFTI MWLLLLSICLGSL YVTAVLGV LS++G PSYC GVRE Y+NSSNVTTM Sbjct 2197 SPKFSKLFTIAMWLLLLSICLGSLIYVTAVLGVLLSNVGAPSYCSGVRESYLNSSNVTTM 2256 Query 1433 DFCQGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFY 1492 DFC+G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW+LAYMLFTKFFY Sbjct 2257 DFCEGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWVLAYMLFTKFFY 2316 Query 1493 LLGLSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVH 1552 LLGLSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVH Sbjct 2317 LLGLSAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVH 2376 Query 1553 IMDGCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFC 1612 IMDGCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFC Sbjct 2377 IMDGCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFC 2436 Query 1613 AGSTFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLS 1672 AGSTFISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLS Sbjct 2437 AGSTFISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLS 2496 Query 1673 HFVNLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSD 1732 HFVNLDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSD Sbjct 2497 HFVNLDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSD 2556 Query 1733 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 1792 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ Sbjct 2557 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 2616 Query 1793 GVVDTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 1852 GVVDTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI Sbjct 2617 GVVDTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 2676 Query 1853 NAQVAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 1912 NAQVAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS Sbjct 2677 NAQVAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 2736 Query 1913 LKGG 1916 LKGG Sbjct 2737 LKGG 2740 >ORF1ab polyprotein [BtRf-BetaCoV/HeB2013] Sequence ID: AIA62289.1 Length: 7068 Range 1: 819 to 2735 Score:3601 bits(9339), Expect:0.0, Method:Compositional matrix adjust., Identities:1782/1920(93%), Positives:1845/1920(96%), Gaps:7/1920(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 APVKGVTFGE+TVLEVQGYKNVKITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APVKGVTFGENTVLEVQGYKNVKITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEE E Sbjct 879 AVVKTLQPVSDLLTKMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEEYE 938 Query 121 DE----EETCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIEAEPEPEPLP 176 E + TCEHEYGTEDDYKGLPLEFG+STE V++EEE+ LDDA EAEPEPEPLP Sbjct 939 GEEEVPDGTCEHEYGTEDDYKGLPLEFGSSTEIQQVDDEEEDW--LDDAGEAEPEPEPLP 996 Query 177 EEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKATNG 236 EEPVNQF GY KLTDNVAIKC+DIVKEAQSAKP VIVNAAN HLKHGGGVAGALNKATNG Sbjct 997 EEPVNQFTGYFKLTDNVAIKCVDIVKEAQSAKPAVIVNAANIHLKHGGGVAGALNKATNG 1056 Query 237 AMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENFNSQ 296 AMQ ESD+YI++NGPLTVGGSCLLSGHNLA+KC+HVVGPNLNAG+DVQLLK AY NFNSQ Sbjct 1057 AMQQESDDYIKRNGPLTVGGSCLLSGHNLAKKCMHVVGPNLNAGDDVQLLKAAYNNFNSQ 1116 Query 297 DVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKVESP 356 DVLLAPLLSAGIFGAKPLQSLKMCVE+VRTQVYLAVND+SLYDQ+VLDYLDSLKPKVESP Sbjct 1117 DVLLAPLLSAGIFGAKPLQSLKMCVEVVRTQVYLAVNDRSLYDQVVLDYLDSLKPKVESP 1176 Query 357 NKEEEPKLEEPKAVQPVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLY 416 KEE PKLEEPKA QP AEKPVDVKPKIKAC++EVTTTLEETK LT LLLFADINGKLY Sbjct 1177 KKEENPKLEEPKAKQP-AEKPVDVKPKIKACVEEVTTTLEETKLLTRNLLLFADINGKLY 1235 Query 417 QDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEVPVAE 476 DSQNMLRGEDMSFLEKDAPY+VGDVITSGDITCVIIPAKK+GGTTEMLA+ALK+VPV E Sbjct 1236 PDSQNMLRGEDMSFLEKDAPYVVGDVITSGDITCVIIPAKKAGGTTEMLAKALKKVPVCE 1295 Query 477 YITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLAHAEE 536 YITTYPGQGCAGYTLEEAKTALK+CKSAFYVLPS+TPN K+E+LGTVSWNLREMLAHAEE Sbjct 1296 YITTYPGQGCAGYTLEEAKTALKRCKSAFYVLPSKTPNVKDEILGTVSWNLREMLAHAEE 1355 Query 537 TRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 596 TRKLMPIC+D+RAIMATIQRKYKGIK+QEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP Sbjct 1356 TRKLMPICMDIRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP 1415 Query 597 LVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEYFVET 656 L+TMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKTPEE+F+ET Sbjct 1416 LITMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTPEEHFIET 1475 Query 657 TSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSLLSLR 716 SLAG+YRDWSYSGQRTELGVEFLKRGDKIVYHT PIEFHLDGEVLPLDKLKSLLSLR Sbjct 1476 ISLAGTYRDWSYSGQRTELGVEFLKRGDKIVYHTIEKPIEFHLDGEVLPLDKLKSLLSLR 1535 Query 717 EVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPS 776 EVKTIKVFTTVDNTNLHT +VDMS+TYGQ FGPTYLDGADVTK+KPHVNHEGKTFFVLPS Sbjct 1536 EVKTIKVFTTVDNTNLHTQLVDMSVTYGQHFGPTYLDGADVTKVKPHVNHEGKTFFVLPS 1595 Query 777 DDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 836 DDTLRSEAFEYYHT+DESFLGRYMSAL+HTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL Sbjct 1596 DDTLRSEAFEYYHTLDESFLGRYMSALSHTKKWKFPQVGGLTSIKWADNNCYLSSVLLAL 1655 Query 837 QQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLES 896 QQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLE Sbjct 1656 QQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLEF 1715 Query 897 AKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQQESS 956 AKRVLN+VCKHCGQKTTTL GVEAVMYMGTLSYDELKTGVSIPCVCGR ATQYLVQQESS Sbjct 1716 AKRVLNLVCKHCGQKTTTLTGVEAVMYMGTLSYDELKTGVSIPCVCGRGATQYLVQQESS 1775 Query 957 FVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEYKGPV 1016 FVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEYKGPV Sbjct 1776 FVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV 1835 Query 1017 TDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQPMPNA 1076 TDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP+PNA Sbjct 1836 TDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNA 1895 Query 1077 SFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSFKKGA 1136 SFDNFKLTCSN KFADDLNQMTGFKKPASREL+VTFFPDLNGDVVAIDYRHYS SFKKGA Sbjct 1896 SFDNFKLTCSNIKFADDLNQMTGFKKPASRELSVTFFPDLNGDVVAIDYRHYSASFKKGA 1955 Query 1137 KLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNLACES 1196 KL+HKPI+WHINQTTNKTTYKPN WCLRCLWSTKPV+TSNSFEVL VE TQGMDNLACES Sbjct 1956 KLLHKPIIWHINQTTNKTTYKPNTWCLRCLWSTKPVETSNSFEVLEVEGTQGMDNLACES 2015 Query 1197 QTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAYVEET 1256 Q TSEEVVENPTVQKE+IECDVK TEVVGNVILKPS+EGVKVTQELGHEDLMAAYVE T Sbjct 2016 QPPTSEEVVENPTVQKEVIECDVKITEVVGNVILKPSDEGVKVTQELGHEDLMAAYVENT 2075 Query 1257 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKKCVQR 1316 SITIKKPNELSLALGLKTLATHGAAAINSVPWSK+LAYVKPFLGQ V TSNC+KKCVQR Sbjct 2076 SITIKKPNELSLALGLKTLATHGAAAINSVPWSKVLAYVKPFLGQATVTTSNCMKKCVQR 2135 Query 1317 VFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVKSPKF 1376 +F+NYMPYVITLLFQLCTFTK TNSRI+ASLPT IAKNSVKSVAKLCLDVCI+YVKSPK Sbjct 2136 IFNNYMPYVITLLFQLCTFTKGTNSRIRASLPTIIAKNSVKSVAKLCLDVCIDYVKSPKS 2195 Query 1377 SKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTMDFCQ 1436 SKLFTI MWLLLLSICLGSL YVTA GV LS+LG+PSYC GVR+LYINSSNVT MDFC+ Sbjct 2196 SKLFTIAMWLLLLSICLGSLIYVTAAFGVLLSNLGIPSYCGGVRDLYINSSNVTIMDFCE 2255 Query 1437 GYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFYLLGL 1496 G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEW LAYMLFTKFFYLLGL Sbjct 2256 GSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWFLAYMLFTKFFYLLGL 2315 Query 1497 SAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVHIMDG 1556 SAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVHIMDG Sbjct 2316 SAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDG 2375 Query 1557 CTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFCAGST 1616 CTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCKAHNWNCLNCDTFC GST Sbjct 2376 CTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKAHNWNCLNCDTFCTGST 2435 Query 1617 FISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLSHFVN 1676 FISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLS FVN Sbjct 2436 FISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLSLFVN 2495 Query 1677 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 1736 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS Sbjct 2496 LDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSDVGDS 2555 Query 1737 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 1796 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD Sbjct 2556 TEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVD 2615 Query 1797 TDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 1856 TDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV Sbjct 2616 TDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQV 2675 Query 1857 AKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 1916 AKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG Sbjct 2676 AKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGG 2735 >non-structural polyprotein 1a [Bat SARS-like coronavirus] Sequence ID: ATO98131.1 Length: 4382 Range 1: 819 to 2740 Score:3601 bits(9338), Expect:0.0, Method:Compositional matrix adjust., Identities:1766/1924(92%), Positives:1836/1924(95%), Gaps:10/1924(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 +P KGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 SPTKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPD+EEDC+E E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDDEEDCDEYE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIE---AEPEPE 173 +EEE +C HEYGTE+DY+GLPLEFGASTE EEEEEEDWL DA E EPEPE Sbjct 939 EEEEVLEESCAHEYGTEEDYQGLPLEFGASTEMQ--VEEEEEEDWLGDATELSEHEPEPE 996 Query 174 PLPEEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKA 233 PEEPVNQF GYLKLTDNVAIKC+DIVKEAQ+A PTVIVNAAN HLKHGGGVAGALNKA Sbjct 997 LTPEEPVNQFTGYLKLTDNVAIKCVDIVKEAQNANPTVIVNAANIHLKHGGGVAGALNKA 1056 Query 234 TNGAMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENF 293 TNGAMQ ESD+YI+ NGPLTVGGSCLLSGHNLA+KCLHVVGPNLNAGED+QLLK AYENF Sbjct 1057 TNGAMQKESDDYIKLNGPLTVGGSCLLSGHNLAKKCLHVVGPNLNAGEDIQLLKAAYENF 1116 Query 294 NSQDVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKV 353 NSQD LLAPLLSAGIFGAKPL SL++CV+ VRTQVY+AVNDK+LY+Q+V+DYLDSLKP+V Sbjct 1117 NSQDTLLAPLLSAGIFGAKPLHSLQVCVQTVRTQVYIAVNDKALYEQVVMDYLDSLKPRV 1176 Query 354 ESPNKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 412 E+P +EE PK E+PK + V +KPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN Sbjct 1177 EAPKQEEPPKTEDPKIEEKSVVQKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 1236 Query 413 GKLYQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEV 472 GKLY DSQNMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+V Sbjct 1237 GKLYHDSQNMLRGEDMSFLEKDAPYVVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKV 1296 Query 473 PVAEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLA 532 PV EYITTYPGQGCAGYTLEEAKTALKKCKSA YVLPSETPN KEE+LGTVSWNLREMLA Sbjct 1297 PVDEYITTYPGQGCAGYTLEEAKTALKKCKSALYVLPSETPNAKEEILGTVSWNLREMLA 1356 Query 533 HAEETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 592 HAEETRKLMPIC+DVRAIMATIQRKYKGIK+QEGIVDYGVRFFFYTSKEPVASIITKLNS Sbjct 1357 HAEETRKLMPICMDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNS 1416 Query 593 LNEPLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEY 652 LNEPLVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKT EE+ Sbjct 1417 LNEPLVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEH 1476 Query 653 FVETTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSL 712 FVET SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSL Sbjct 1477 FVETVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPVEFHLDGEVLPLDKLKSL 1536 Query 713 LSLREVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 772 LSLREVKTIKVFTTVDNTNLHT +VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF Sbjct 1537 LSLREVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 1596 Query 773 VLPSDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 832 VLPSDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV Sbjct 1597 VLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 1656 Query 833 LLALQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 892 LLALQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA Sbjct 1657 LLALQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 1716 Query 893 NLESAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQ 952 NLESAKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQ Sbjct 1717 NLESAKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQ 1776 Query 953 QESSFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEY 1012 QESSFVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEY Sbjct 1777 QESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEY 1836 Query 1013 KGPVTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQP 1072 KGPVTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP Sbjct 1837 KGPVTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQP 1896 Query 1073 MPNASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSF 1132 +PNASFDNFKLTCSNTKFAD LNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SF Sbjct 1897 LPNASFDNFKLTCSNTKFADALNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASF 1956 Query 1133 KKGAKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNL 1192 KKGAKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNL Sbjct 1957 KKGAKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNL 2016 Query 1193 ACESQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAY 1252 ACESQ TSE VVENPT+QKE++ECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAY Sbjct 2017 ACESQQPTSEAVVENPTIQKEVLECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAY 2076 Query 1253 VEETSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKK 1312 VE TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQTAV TSNC K+ Sbjct 2077 VENTSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQTAVTTSNCAKR 2136 Query 1313 CVQRVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVK 1372 VQR+F+NYMPYV+TLLFQLCTFTKSTNSRI+ASLPTTIAKNSVK VA+LCLD INYVK Sbjct 2137 LVQRMFNNYMPYVLTLLFQLCTFTKSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYVK 2196 Query 1373 SPKFSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTM 1432 SPKFSKLFTI MWLLLLSICLGSL YVTA LGV LS++G PSYC GVRE Y+NSSNVTTM Sbjct 2197 SPKFSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNVGAPSYCSGVRESYLNSSNVTTM 2256 Query 1433 DFCQGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFY 1492 DFC+G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFY Sbjct 2257 DFCEGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWFLAYMLFTKFFY 2316 Query 1493 LLGLSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVH 1552 LLGLSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVH Sbjct 2317 LLGLSAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVH 2376 Query 1553 IMDGCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFC 1612 IMDGC SSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFC Sbjct 2377 IMDGCNSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFC 2436 Query 1613 AGSTFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLS 1672 AGSTFISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLS Sbjct 2437 AGSTFISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLS 2496 Query 1673 HFVNLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSD 1732 HFVNLDNLR NNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSD Sbjct 2497 HFVNLDNLRTNNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSD 2556 Query 1733 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 1792 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ Sbjct 2557 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 2616 Query 1793 GVVDTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 1852 GVVDTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI Sbjct 2617 GVVDTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 2676 Query 1853 NAQVAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 1912 NAQVAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS Sbjct 2677 NAQVAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 2736 Query 1913 LKGG 1916 LKGG Sbjct 2737 LKGG 2740 >ORF1ab polyprotein [BtRs-BetaCoV/YN2013] Sequence ID: AIA62329.1 Length: 7073 Range 1: 819 to 2740 Score:3601 bits(9337), Expect:0.0, Method:Compositional matrix adjust., Identities:1769/1924(92%), Positives:1839/1924(95%), Gaps:10/1924(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP KGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APTKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLL MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDC+E E Sbjct 879 AVVKTLQPVSDLLNNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCDEYE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIE---AEPEPE 173 +EEE +C HEYGTE+DY+GLPLEFGASTE EEE EEDWL DA E E EPE Sbjct 939 EEEEVTEESCAHEYGTEEDYQGLPLEFGASTEMQ--VEEEAEEDWLGDATELSEHELEPE 996 Query 174 PLPEEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKA 233 P PEE VNQF GYLKLTDNVAIKC+DIVKEAQ+A PTVIVNAAN HLKHGGGVAGALNKA Sbjct 997 PTPEESVNQFTGYLKLTDNVAIKCVDIVKEAQNANPTVIVNAANIHLKHGGGVAGALNKA 1056 Query 234 TNGAMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENF 293 TNGAMQ ESD+YI+ NGPLTVGGSCLLSGHNLA+KCLHVVGPNLNAGED+QLLK AYENF Sbjct 1057 TNGAMQEESDDYIKLNGPLTVGGSCLLSGHNLAKKCLHVVGPNLNAGEDIQLLKAAYENF 1116 Query 294 NSQDVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKV 353 NSQD LLAPLLSAGIFGAKPLQSL++CV+ VRTQVY+AVNDK+LY+Q+V+DYLDSLKP+V Sbjct 1117 NSQDTLLAPLLSAGIFGAKPLQSLQVCVQTVRTQVYIAVNDKALYEQVVMDYLDSLKPRV 1176 Query 354 ESPNKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 412 E+P +EE P+ E+PK + V +KP+DVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN Sbjct 1177 EAPKQEEPPRTEDPKIEEKSVVQKPIDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 1236 Query 413 GKLYQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEV 472 GKLY DS NMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+V Sbjct 1237 GKLYHDSHNMLRGEDMSFLEKDAPYMVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKV 1296 Query 473 PVAEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLA 532 PV EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPN KEE+LGTVSWNLREMLA Sbjct 1297 PVDEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNAKEEILGTVSWNLREMLA 1356 Query 533 HAEETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 592 HAEETRKLMPIC+DVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS Sbjct 1357 HAEETRKLMPICMDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 1416 Query 593 LNEPLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEY 652 LNEPLVTMPIGYVTHG LEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKTPEE+ Sbjct 1417 LNEPLVTMPIGYVTHGFTLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTPEEH 1476 Query 653 FVETTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSL 712 FVET SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSL Sbjct 1477 FVETVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPVEFHLDGEVLPLDKLKSL 1536 Query 713 LSLREVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 772 LSLREVKTIKVFTTVDNTNLHTH+VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF Sbjct 1537 LSLREVKTIKVFTTVDNTNLHTHLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 1596 Query 773 VLPSDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 832 VLPSDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV Sbjct 1597 VLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 1656 Query 833 LLALQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 892 LLALQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA Sbjct 1657 LLALQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 1716 Query 893 NLESAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQ 952 NLESAKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSI CVCGR+ATQYLVQ Sbjct 1717 NLESAKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDNLKTGVSILCVCGRDATQYLVQ 1776 Query 953 QESSFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEY 1012 QESSFVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEY Sbjct 1777 QESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEY 1836 Query 1013 KGPVTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQP 1072 KGPVTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP Sbjct 1837 KGPVTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQP 1896 Query 1073 MPNASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSF 1132 +PNASFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SF Sbjct 1897 LPNASFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASF 1956 Query 1133 KKGAKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNL 1192 KKGAKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNL Sbjct 1957 KKGAKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNL 2016 Query 1193 ACESQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAY 1252 ACESQ TSEEVVENPT+QKE++ECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAY Sbjct 2017 ACESQQPTSEEVVENPTIQKEVLECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAY 2076 Query 1253 VEETSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKK 1312 VE TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ AV TSNC K+ Sbjct 2077 VENTSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAAVTTSNCAKR 2136 Query 1313 CVQRVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVK 1372 VQR+F+NYMPYV+TLLFQLCTFTKSTNSRI+ASLPTTIAKNSVK VA+LCLD INYVK Sbjct 2137 LVQRMFNNYMPYVLTLLFQLCTFTKSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYVK 2196 Query 1373 SPKFSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTM 1432 SPKFSKLFTI MWLLLLSICLGSL YVTAVLGV LS++G PSYC GVRE Y+NSSNVTTM Sbjct 2197 SPKFSKLFTIAMWLLLLSICLGSLIYVTAVLGVLLSNVGAPSYCSGVRESYLNSSNVTTM 2256 Query 1433 DFCQGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFY 1492 DFC+G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW+LAYMLFTKFFY Sbjct 2257 DFCEGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWVLAYMLFTKFFY 2316 Query 1493 LLGLSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVH 1552 LLGLSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVH Sbjct 2317 LLGLSAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVH 2376 Query 1553 IMDGCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFC 1612 IMDGCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFC Sbjct 2377 IMDGCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFC 2436 Query 1613 AGSTFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLS 1672 AGSTFISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLS Sbjct 2437 AGSTFISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLS 2496 Query 1673 HFVNLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSD 1732 HFVNLDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSD Sbjct 2497 HFVNLDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSD 2556 Query 1733 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 1792 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ Sbjct 2557 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 2616 Query 1793 GVVDTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 1852 GVVDTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI Sbjct 2617 GVVDTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 2676 Query 1853 NAQVAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 1912 NAQVAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS Sbjct 2677 NAQVAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 2736 Query 1913 LKGG 1916 LKGG Sbjct 2737 LKGG 2740 >ORF1a polyprotein [Sarbecovirus sp.] Sequence ID: UUX91052.1 Length: 4382 Range 1: 819 to 2740 Score:3599 bits(9332), Expect:0.0, Method:Compositional matrix adjust., Identities:1763/1924(92%), Positives:1836/1924(95%), Gaps:10/1924(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP KGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APTKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVK LQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPD+EEDC+E E Sbjct 879 AVVKILQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDDEEDCDEYE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIE---AEPEPE 173 +EEE +C HEYGTE+DY+GLPLEFGASTE EEEEEEDWL DA + EPEPE Sbjct 939 EEEEVLEESCAHEYGTEEDYRGLPLEFGASTEMQ--VEEEEEEDWLGDATDLSEHEPEPE 996 Query 174 PLPEEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKA 233 PEEPVNQF GYLKLTDNVAIKC+DIVKEAQ+A PTVIVNAAN HLKHGGGVAGALNKA Sbjct 997 LTPEEPVNQFTGYLKLTDNVAIKCVDIVKEAQNANPTVIVNAANIHLKHGGGVAGALNKA 1056 Query 234 TNGAMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENF 293 TNGAMQ ESD+YI+ NGPL VGGSCLLSGHNLA+KCLHVVGPNLNAGED+QLLK AYENF Sbjct 1057 TNGAMQKESDDYIKLNGPLVVGGSCLLSGHNLAKKCLHVVGPNLNAGEDIQLLKAAYENF 1116 Query 294 NSQDVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKV 353 NSQD LLAPLLSAGIFGAKPLQSL++CV+ VRTQVY+AVNDK+LY+Q+V+DYLDSLKP+V Sbjct 1117 NSQDTLLAPLLSAGIFGAKPLQSLQVCVQTVRTQVYIAVNDKALYEQVVMDYLDSLKPRV 1176 Query 354 ESPNKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 412 E+P +EE P+ E+PK + V +KP+DVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN Sbjct 1177 EAPKQEEPPRTEDPKIEEKSVVQKPIDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 1236 Query 413 GKLYQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEV 472 GKLY DS NMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+V Sbjct 1237 GKLYHDSHNMLRGEDMSFLEKDAPYVVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKV 1296 Query 473 PVAEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLA 532 PV EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPN KEE+LGTVSWNLREMLA Sbjct 1297 PVDEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNAKEEILGTVSWNLREMLA 1356 Query 533 HAEETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 592 HAEETRKLMPIC+DVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS Sbjct 1357 HAEETRKLMPICMDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 1416 Query 593 LNEPLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEY 652 LNEPLVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKT EE+ Sbjct 1417 LNEPLVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEH 1476 Query 653 FVETTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSL 712 FVET SLAGSYRDW YSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSL Sbjct 1477 FVETVSLAGSYRDWYYSGQRTELGVEFLKRGDKIVYHTLESPVEFHLDGEVLPLDKLKSL 1536 Query 713 LSLREVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 772 LSLREVKTIKVFTTVDNTNLHT +VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF Sbjct 1537 LSLREVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 1596 Query 773 VLPSDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 832 VLPSDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV Sbjct 1597 VLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 1656 Query 833 LLALQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 892 LLALQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA Sbjct 1657 LLALQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 1716 Query 893 NLESAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQ 952 NLESAKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQ Sbjct 1717 NLESAKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQ 1776 Query 953 QESSFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEY 1012 QESSFVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEY Sbjct 1777 QESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEY 1836 Query 1013 KGPVTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQP 1072 KGPVTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP Sbjct 1837 KGPVTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQP 1896 Query 1073 MPNASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSF 1132 +PNASFDNFKLTCSN KFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SF Sbjct 1897 LPNASFDNFKLTCSNIKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASF 1956 Query 1133 KKGAKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNL 1192 KKGAKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNL Sbjct 1957 KKGAKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNL 2016 Query 1193 ACESQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAY 1252 ACESQ TSEEVVENPT+QKE++ECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAY Sbjct 2017 ACESQQPTSEEVVENPTIQKEVLECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAY 2076 Query 1253 VEETSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKK 1312 VE TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ AV TSNC K+ Sbjct 2077 VENTSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAAVTTSNCAKR 2136 Query 1313 CVQRVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVK 1372 VQR+F+NYMPYV+TLLFQLCTFTKSTNSRI+ASLPTTIAKNSVK VA+LCLD INYVK Sbjct 2137 LVQRMFNNYMPYVLTLLFQLCTFTKSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYVK 2196 Query 1373 SPKFSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTM 1432 SPKFSKLFTI MWLLLLSICLGSL YVTA LGV LS+ G PSYC GVRE Y+NSSNVTTM Sbjct 2197 SPKFSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNFGAPSYCSGVRESYLNSSNVTTM 2256 Query 1433 DFCQGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFY 1492 DFC+G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW+LAYMLFTKFFY Sbjct 2257 DFCEGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWVLAYMLFTKFFY 2316 Query 1493 LLGLSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVH 1552 LLGLSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVH Sbjct 2317 LLGLSAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVH 2376 Query 1553 IMDGCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFC 1612 IMDGCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFC+ HNWNCLNCDTFC Sbjct 2377 IMDGCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCRTHNWNCLNCDTFC 2436 Query 1613 AGSTFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLS 1672 AGSTFISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYF+KAGQKTYERHPLS Sbjct 2437 AGSTFISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFNKAGQKTYERHPLS 2496 Query 1673 HFVNLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSD 1732 HFVNLDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSD Sbjct 2497 HFVNLDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSD 2556 Query 1733 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 1792 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ Sbjct 2557 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 2616 Query 1793 GVVDTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 1852 GVVDTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI Sbjct 2617 GVVDTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 2676 Query 1853 NAQVAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 1912 NAQVAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS Sbjct 2677 NAQVAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 2736 Query 1913 LKGG 1916 LKGG Sbjct 2737 LKGG 2740 >ORF1a polyprotein [Severe acute respiratory syndrome-related coronavirus] Sequence ID: WEG19501.1 Length: 4382 Range 1: 819 to 2740 Score:3598 bits(9329), Expect:0.0, Method:Compositional matrix adjust., Identities:1766/1924(92%), Positives:1839/1924(95%), Gaps:10/1924(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP KGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APTKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPD+EEDC+E E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDDEEDCDEYE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIE---AEPEPE 173 +EEE +C HEYGTE+DY+GLPLEFGASTE EEEEEEDWL DA + EPEPE Sbjct 939 EEEEVPEESCAHEYGTEEDYRGLPLEFGASTEMQ--VEEEEEEDWLGDATDLSEHEPEPE 996 Query 174 PLPEEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKA 233 PEEPVNQF GYLKLTDNVAIKC+DIVKEAQ+A PTVIVNAAN HLKHGGGVAGALNKA Sbjct 997 LTPEEPVNQFTGYLKLTDNVAIKCVDIVKEAQNANPTVIVNAANIHLKHGGGVAGALNKA 1056 Query 234 TNGAMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENF 293 TNGAMQ ESD+YI+ NGPL VGGSCLLSGHNLA+KCLHVVGPNLNAGED+QLLK AYENF Sbjct 1057 TNGAMQKESDDYIKLNGPLVVGGSCLLSGHNLAKKCLHVVGPNLNAGEDIQLLKAAYENF 1116 Query 294 NSQDVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKV 353 NSQD LLAPLLSAGIFGAKPLQSL++CV+ VRTQVY+AVNDK+LY+Q+V+DYLDSLKP+V Sbjct 1117 NSQDTLLAPLLSAGIFGAKPLQSLQVCVQTVRTQVYIAVNDKALYEQVVMDYLDSLKPRV 1176 Query 354 ESPNKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 412 E+P +EE P+ E+PK + V +KP+DVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN Sbjct 1177 EAPKQEEPPRTEDPKIEEKSVVQKPIDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 1236 Query 413 GKLYQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEV 472 GKLY DS NMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+V Sbjct 1237 GKLYHDSHNMLRGEDMSFLEKDAPYVVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKV 1296 Query 473 PVAEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLA 532 PV EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPN KEE+LGTVSWNLREMLA Sbjct 1297 PVDEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNAKEEILGTVSWNLREMLA 1356 Query 533 HAEETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 592 HAEETRKLMPIC+DVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS Sbjct 1357 HAEETRKLMPICMDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 1416 Query 593 LNEPLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEY 652 LNEPLVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKT EE+ Sbjct 1417 LNEPLVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEH 1476 Query 653 FVETTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSL 712 FVET SLAGSYRDW YSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSL Sbjct 1477 FVETVSLAGSYRDWYYSGQRTELGVEFLKRGDKIVYHTLESPVEFHLDGEVLPLDKLKSL 1536 Query 713 LSLREVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 772 LSLREVKTIKVFTTVDNTNLHT +VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF Sbjct 1537 LSLREVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 1596 Query 773 VLPSDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 832 VLPSDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV Sbjct 1597 VLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 1656 Query 833 LLALQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 892 LLALQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA Sbjct 1657 LLALQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 1716 Query 893 NLESAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQ 952 NLESAKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQ Sbjct 1717 NLESAKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQ 1776 Query 953 QESSFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEY 1012 QESSFVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEY Sbjct 1777 QESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEY 1836 Query 1013 KGPVTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQP 1072 KGPVTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP Sbjct 1837 KGPVTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQP 1896 Query 1073 MPNASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSF 1132 +PNASFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SF Sbjct 1897 LPNASFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASF 1956 Query 1133 KKGAKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNL 1192 KKGAKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNL Sbjct 1957 KKGAKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNL 2016 Query 1193 ACESQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAY 1252 ACESQ TSEEVVENPT+QKE++ECDVKTTEVVGNVILKPS++GVKVTQELGHEDLMAAY Sbjct 2017 ACESQQPTSEEVVENPTIQKEVLECDVKTTEVVGNVILKPSDDGVKVTQELGHEDLMAAY 2076 Query 1253 VEETSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKK 1312 VE TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ AV TSNC K+ Sbjct 2077 VENTSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAAVTTSNCAKR 2136 Query 1313 CVQRVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVK 1372 VQR+F+NYMPYV+TLLFQLCTFTKSTNSRI+ASLPTTIAKNSVK VA+LCLD INYVK Sbjct 2137 LVQRMFNNYMPYVLTLLFQLCTFTKSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYVK 2196 Query 1373 SPKFSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTM 1432 SPKFSKLFTI MWLLLLSICLGSL YVTA LGV LS+LG PSYC GVRE Y+NSSNVTTM Sbjct 2197 SPKFSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNLGAPSYCSGVRESYLNSSNVTTM 2256 Query 1433 DFCQGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFY 1492 DFC+G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW+LAYMLFTKFFY Sbjct 2257 DFCEGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWVLAYMLFTKFFY 2316 Query 1493 LLGLSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVH 1552 LLGLSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVH Sbjct 2317 LLGLSAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVH 2376 Query 1553 IMDGCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFC 1612 IMDGCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFC+ HNWNCLNCDTFC Sbjct 2377 IMDGCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCRTHNWNCLNCDTFC 2436 Query 1613 AGSTFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLS 1672 AGSTFISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLS Sbjct 2437 AGSTFISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLS 2496 Query 1673 HFVNLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSD 1732 HFVNLDNLRANNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSD Sbjct 2497 HFVNLDNLRANNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSD 2556 Query 1733 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 1792 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ Sbjct 2557 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 2616 Query 1793 GVVDTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 1852 GVVDTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI Sbjct 2617 GVVDTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 2676 Query 1853 NAQVAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 1912 NAQVAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS Sbjct 2677 NAQVAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 2736 Query 1913 LKGG 1916 LKGG Sbjct 2737 LKGG 2740 >non-structural polyprotein 1a [Bat SARS-like coronavirus] Sequence ID: ATO98230.1 Length: 4382 Range 1: 819 to 2740 Score:3595 bits(9321), Expect:0.0, Method:Compositional matrix adjust., Identities:1763/1924(92%), Positives:1835/1924(95%), Gaps:10/1924(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP KGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APTKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPD+EEDC+E E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDDEEDCDEYE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIE---AEPEPE 173 +EEE +C HEYGTE+DY+GLPLEFGASTE EEEEEEDWL DA + EPEPE Sbjct 939 EEEEVPEESCAHEYGTEEDYRGLPLEFGASTEMQ--VEEEEEEDWLGDATDLSEHEPEPE 996 Query 174 PLPEEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKA 233 PEEPVNQF GYLKLTDNVAIKC+DIVKEAQ+A PTVIVNAAN HLKHGGGVAGALNKA Sbjct 997 LTPEEPVNQFTGYLKLTDNVAIKCVDIVKEAQNANPTVIVNAANIHLKHGGGVAGALNKA 1056 Query 234 TNGAMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENF 293 TNGAMQ ESD+YI+ NGPL VGGSCLLSGHNLA+KCLHVVGPNLNAGED+QLLK AYENF Sbjct 1057 TNGAMQKESDDYIKLNGPLVVGGSCLLSGHNLAKKCLHVVGPNLNAGEDIQLLKAAYENF 1116 Query 294 NSQDVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKV 353 NSQD LLAPLLSAGIFGAKPLQSL++CV+ VRTQVY+AVNDK+LY+Q+V+DYLDSLKP+V Sbjct 1117 NSQDTLLAPLLSAGIFGAKPLQSLQVCVQTVRTQVYIAVNDKALYEQVVMDYLDSLKPRV 1176 Query 354 ESPNKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 412 E+P +EE P+ E+PK + V +KP+DVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN Sbjct 1177 EAPKQEEPPRTEDPKIEEKSVVQKPIDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 1236 Query 413 GKLYQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEV 472 GKLY DS NMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+V Sbjct 1237 GKLYHDSHNMLRGEDMSFLEKDAPYVVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKV 1296 Query 473 PVAEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLA 532 PV EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPN KEE+LGTVSWNLREMLA Sbjct 1297 PVDEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNAKEEILGTVSWNLREMLA 1356 Query 533 HAEETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 592 HAEETRKLMPIC+DVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS Sbjct 1357 HAEETRKLMPICMDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 1416 Query 593 LNEPLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEY 652 LNEPLVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKT EE+ Sbjct 1417 LNEPLVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEH 1476 Query 653 FVETTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSL 712 FVET SLAGSYRDW YSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSL Sbjct 1477 FVETVSLAGSYRDWYYSGQRTELGVEFLKRGDKIVYHTLESPVEFHLDGEVLPLDKLKSL 1536 Query 713 LSLREVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 772 LSLREVKTIKVFTTVDNTNLHT +VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF Sbjct 1537 LSLREVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 1596 Query 773 VLPSDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 832 VLPSDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV Sbjct 1597 VLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 1656 Query 833 LLALQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 892 LLALQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA Sbjct 1657 LLALQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 1716 Query 893 NLESAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQ 952 NLESAKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQ Sbjct 1717 NLESAKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQ 1776 Query 953 QESSFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEY 1012 QESSFVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEY Sbjct 1777 QESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEY 1836 Query 1013 KGPVTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQP 1072 KGPVTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP Sbjct 1837 KGPVTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQP 1896 Query 1073 MPNASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSF 1132 +PNASFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SF Sbjct 1897 LPNASFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASF 1956 Query 1133 KKGAKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNL 1192 KKGAKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNL Sbjct 1957 KKGAKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNL 2016 Query 1193 ACESQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAY 1252 ACESQ TSEEVVENPT+QKE+IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAY Sbjct 2017 ACESQQPTSEEVVENPTIQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAY 2076 Query 1253 VEETSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKK 1312 VE TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ A+ TSNC K+ Sbjct 2077 VENTSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAAITTSNCAKR 2136 Query 1313 CVQRVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVK 1372 QRVF+NYMPYV+TLLFQLCTFTKSTNSRI+ASLPTTIAKNSV+ VA+LCLD INYVK Sbjct 2137 LAQRVFNNYMPYVLTLLFQLCTFTKSTNSRIRASLPTTIAKNSVRGVARLCLDAGINYVK 2196 Query 1373 SPKFSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTM 1432 SPKFSKLFTI MWLLLLSICLGSL YVTA LGV LS+ G PSYC GVRE Y+NSSNVTTM Sbjct 2197 SPKFSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNFGAPSYCSGVRESYLNSSNVTTM 2256 Query 1433 DFCQGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFY 1492 DFC+G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFY Sbjct 2257 DFCEGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWFLAYMLFTKFFY 2316 Query 1493 LLGLSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVH 1552 LLGLSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVH Sbjct 2317 LLGLSAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVH 2376 Query 1553 IMDGCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFC 1612 IMDGCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFC Sbjct 2377 IMDGCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFC 2436 Query 1613 AGSTFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLS 1672 GSTFISDEVARDLSLQFKRPINPTDQS+Y+VDSV VKNGALHLYFDKAGQKTYERHPLS Sbjct 2437 TGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVAVKNGALHLYFDKAGQKTYERHPLS 2496 Query 1673 HFVNLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSD 1732 HFVNLDNLRANNTKGSLPINVIVFDGKSKC+ESAA+SASVYYSQLMCQPILLLDQALVSD Sbjct 2497 HFVNLDNLRANNTKGSLPINVIVFDGKSKCDESAARSASVYYSQLMCQPILLLDQALVSD 2556 Query 1733 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 1792 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ Sbjct 2557 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 2616 Query 1793 GVVDTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 1852 GVVDTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI Sbjct 2617 GVVDTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 2676 Query 1853 NAQVAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 1912 NAQVAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS Sbjct 2677 NAQVAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 2736 Query 1913 LKGG 1916 LKGG Sbjct 2737 LKGG 2740 >non-structural polyprotein 1a [Bat SARS-like coronavirus] Sequence ID: ATO98107.1 Length: 4382 Range 1: 819 to 2740 Score:3594 bits(9319), Expect:0.0, Method:Compositional matrix adjust., Identities:1764/1924(92%), Positives:1837/1924(95%), Gaps:10/1924(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP+KGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APIKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPD+EEDC+E E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDDEEDCDEYE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIE---AEPEPE 173 +EEE +C HEYGTE+DY+GLPLEFGASTE EEEEEEDWL DA E EPEPE Sbjct 939 EEEEVPEESCAHEYGTEEDYQGLPLEFGASTEMQ--VEEEEEEDWLGDATELSEHEPEPE 996 Query 174 PLPEEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKA 233 PEEPVNQF GYLKLTDNVAIKC+DIVKEAQ+A PTVIVNAAN HLKHGGGVAGALNKA Sbjct 997 LTPEEPVNQFTGYLKLTDNVAIKCVDIVKEAQNANPTVIVNAANIHLKHGGGVAGALNKA 1056 Query 234 TNGAMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENF 293 TNGAMQ ESD+YI+ NGPLTVGGSCLLSGHNLA+KCLHVVGPNLNAGED+QLLK AYENF Sbjct 1057 TNGAMQKESDDYIKLNGPLTVGGSCLLSGHNLAKKCLHVVGPNLNAGEDIQLLKAAYENF 1116 Query 294 NSQDVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKV 353 NSQD LLAPLLSAGIFGAKPLQSL++CV+ VRTQVY+AVNDK+LY+Q+V+DYLDSLKP+V Sbjct 1117 NSQDTLLAPLLSAGIFGAKPLQSLQVCVQTVRTQVYIAVNDKALYEQVVMDYLDSLKPRV 1176 Query 354 ESPNKEEEPKLEEPKAVQP-VAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 412 E+P +EE PK E+P+ + V +KPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN Sbjct 1177 EAPKQEEPPKTEDPEIEEKFVVQKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 1236 Query 413 GKLYQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEV 472 GKLY DSQNMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+V Sbjct 1237 GKLYHDSQNMLRGEDMSFLEKDAPYMVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKV 1296 Query 473 PVAEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLA 532 PV EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPN KEE+LGTVSWNLREMLA Sbjct 1297 PVDEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNAKEEILGTVSWNLREMLA 1356 Query 533 HAEETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 592 HAEETRKLMPIC+DVRAIMATIQRKYKGIK+QEGIVDYGVRFFFYTSKEPVASIITKLNS Sbjct 1357 HAEETRKLMPICMDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNS 1416 Query 593 LNEPLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEY 652 LNEPLVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKT EE+ Sbjct 1417 LNEPLVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEH 1476 Query 653 FVETTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSL 712 FVET SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSL Sbjct 1477 FVETVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPVEFHLDGEVLPLDKLKSL 1536 Query 713 LSLREVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 772 LSLREVKTIKVFTTVDNTNLHT +VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF Sbjct 1537 LSLREVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 1596 Query 773 VLPSDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 832 VLPSDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV Sbjct 1597 VLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 1656 Query 833 LLALQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 892 LLALQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA Sbjct 1657 LLALQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 1716 Query 893 NLESAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQ 952 NLESAKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQ Sbjct 1717 NLESAKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQ 1776 Query 953 QESSFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEY 1012 QESSFVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEY Sbjct 1777 QESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEY 1836 Query 1013 KGPVTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQP 1072 KGPVTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP Sbjct 1837 KGPVTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQP 1896 Query 1073 MPNASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSF 1132 +PNASFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SF Sbjct 1897 LPNASFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASF 1956 Query 1133 KKGAKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNL 1192 KKGAKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNL Sbjct 1957 KKGAKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNL 2016 Query 1193 ACESQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAY 1252 ACESQ TSEEVVENPT+QKE++ECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAY Sbjct 2017 ACESQQPTSEEVVENPTIQKEVLECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAY 2076 Query 1253 VEETSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKK 1312 VE TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ A+ TSNC K+ Sbjct 2077 VENTSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAAITTSNCAKR 2136 Query 1313 CVQRVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVK 1372 Q VF+NYMPYV+TLLFQLCTFTKSTNSRI+ASLPTTIAKNSVK VA+LCLD INYVK Sbjct 2137 LAQCVFNNYMPYVLTLLFQLCTFTKSTNSRIRASLPTTIAKNSVKGVARLCLDAVINYVK 2196 Query 1373 SPKFSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTM 1432 SPKFSKLFTI MWLLLLSICLGSL YVTA LGV LS+ G PSYC GVRE Y+NSSNVTTM Sbjct 2197 SPKFSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNFGAPSYCSGVRESYLNSSNVTTM 2256 Query 1433 DFCQGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFY 1492 DFC+G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFY Sbjct 2257 DFCEGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWFLAYMLFTKFFY 2316 Query 1493 LLGLSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVH 1552 LLGLSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVH Sbjct 2317 LLGLSAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVH 2376 Query 1553 IMDGCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFC 1612 IMDGCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFC Sbjct 2377 IMDGCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFC 2436 Query 1613 AGSTFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLS 1672 GSTFISDEVARDLSLQFKRPINPTDQS+Y+VDSV VKNGALHLYFDKAGQKTYERHPLS Sbjct 2437 TGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVAVKNGALHLYFDKAGQKTYERHPLS 2496 Query 1673 HFVNLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSD 1732 HFVNLDNLRANNTKGSLPINVIVFDGKSKC+ESAA+SASVYYSQLMCQPILLLDQALVSD Sbjct 2497 HFVNLDNLRANNTKGSLPINVIVFDGKSKCDESAARSASVYYSQLMCQPILLLDQALVSD 2556 Query 1733 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 1792 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLK LVATAHSELAKGVALDGVLSTFVSAARQ Sbjct 2557 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKVLVATAHSELAKGVALDGVLSTFVSAARQ 2616 Query 1793 GVVDTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 1852 GVVDTDVDTKDVIECLKLSHHSD+EVTGDSCN+FMLTYNKVENMTPRDLGACIDCNARHI Sbjct 2617 GVVDTDVDTKDVIECLKLSHHSDLEVTGDSCNHFMLTYNKVENMTPRDLGACIDCNARHI 2676 Query 1853 NAQVAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 1912 NAQVAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS Sbjct 2677 NAQVAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 2736 Query 1913 LKGG 1916 LKGG Sbjct 2737 LKGG 2740 >non-structural polyprotein 1a [Bat SARS-like coronavirus] Sequence ID: ATO98217.1 Length: 4382 Range 1: 819 to 2740 Score:3593 bits(9318), Expect:0.0, Method:Compositional matrix adjust., Identities:1765/1924(92%), Positives:1837/1924(95%), Gaps:10/1924(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP+KGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APIKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPD+EEDC+E E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDDEEDCDEYE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIE---AEPEPE 173 +EEE +C HEYGTE+DY+GLPLEFGASTE EEEEEEDWL DA E EPEPE Sbjct 939 EEEEVPEESCAHEYGTEEDYQGLPLEFGASTEMQ--VEEEEEEDWLGDATELSEHEPEPE 996 Query 174 PLPEEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKA 233 PEEPVNQF GYLKLTDNVAIKC+DIVKEAQ+A PTVIVNAAN HLKHGGGVAGALNKA Sbjct 997 LTPEEPVNQFTGYLKLTDNVAIKCVDIVKEAQNANPTVIVNAANIHLKHGGGVAGALNKA 1056 Query 234 TNGAMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENF 293 TNGAMQ ESD+YI+ NGPLTVGGSCLLSGHNLA+KCLHVVGPNLNAGED+QLLK AYENF Sbjct 1057 TNGAMQKESDDYIKLNGPLTVGGSCLLSGHNLAKKCLHVVGPNLNAGEDIQLLKAAYENF 1116 Query 294 NSQDVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKV 353 NSQD LLAPLLSAGIFGAKPLQSL++CV+ VRTQVY+AVNDK+LY+Q+V+DYLDSLKP+V Sbjct 1117 NSQDTLLAPLLSAGIFGAKPLQSLQVCVQTVRTQVYIAVNDKALYEQVVMDYLDSLKPRV 1176 Query 354 ESPNKEEEPKLEEPKAVQP-VAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 412 E+P +EE PK E+P+ + V +KPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN Sbjct 1177 EAPKQEEPPKTEDPEIEEKFVVQKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 1236 Query 413 GKLYQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEV 472 GKLY DSQNMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+V Sbjct 1237 GKLYHDSQNMLRGEDMSFLEKDAPYMVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKV 1296 Query 473 PVAEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLA 532 PV EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPN KEE+LGTVSWNLREMLA Sbjct 1297 PVDEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNAKEEILGTVSWNLREMLA 1356 Query 533 HAEETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 592 HAEETRKLMPIC+DVRAIMATIQRKYKGIK+QEGIVDYGVRFFFYTSKEPVASIITKLNS Sbjct 1357 HAEETRKLMPICMDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNS 1416 Query 593 LNEPLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEY 652 LNEPLVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKT EE+ Sbjct 1417 LNEPLVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEH 1476 Query 653 FVETTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSL 712 FVET SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSL Sbjct 1477 FVETVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPVEFHLDGEVLPLDKLKSL 1536 Query 713 LSLREVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 772 LSLREVKTIKVFTTVDNTNLHT +VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF Sbjct 1537 LSLREVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 1596 Query 773 VLPSDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 832 VLPSDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV Sbjct 1597 VLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 1656 Query 833 LLALQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 892 LLALQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA Sbjct 1657 LLALQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 1716 Query 893 NLESAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQ 952 NLESAKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQ Sbjct 1717 NLESAKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQ 1776 Query 953 QESSFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEY 1012 QESSFVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEY Sbjct 1777 QESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEY 1836 Query 1013 KGPVTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQP 1072 KGPVTDVFYKETSYTT I+PVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP Sbjct 1837 KGPVTDVFYKETSYTTTIRPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQP 1896 Query 1073 MPNASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSF 1132 +PNASFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SF Sbjct 1897 LPNASFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASF 1956 Query 1133 KKGAKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNL 1192 KKGAKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNL Sbjct 1957 KKGAKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNL 2016 Query 1193 ACESQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAY 1252 ACESQ TSEEVVENPT+QKE+IECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAY Sbjct 2017 ACESQQPTSEEVVENPTIQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAY 2076 Query 1253 VEETSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKK 1312 VE TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ A+ TSNC K+ Sbjct 2077 VENTSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAAITTSNCAKR 2136 Query 1313 CVQRVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVK 1372 QRVF+NYMPYV+TLLFQLCTFTKSTNSRI+ASLPTTIAKNSV+ VA+LCLD INYVK Sbjct 2137 LAQRVFNNYMPYVLTLLFQLCTFTKSTNSRIRASLPTTIAKNSVRGVARLCLDAGINYVK 2196 Query 1373 SPKFSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTM 1432 SPKFSKLFTI MWLLLLSICLGSL YVTA LGV LS+ G PSYC GVRE Y+NSSNVTTM Sbjct 2197 SPKFSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNFGAPSYCSGVRESYLNSSNVTTM 2256 Query 1433 DFCQGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFY 1492 DFC+G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFY Sbjct 2257 DFCEGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWFLAYMLFTKFFY 2316 Query 1493 LLGLSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVH 1552 LLGLSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVH Sbjct 2317 LLGLSAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVH 2376 Query 1553 IMDGCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFC 1612 IMDGCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFC Sbjct 2377 IMDGCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFC 2436 Query 1613 AGSTFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLS 1672 GSTFISDEVARDLSLQFKRPINPTDQS+Y+VDSV VKNGALHLYFDKAGQKTYERHPLS Sbjct 2437 TGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVAVKNGALHLYFDKAGQKTYERHPLS 2496 Query 1673 HFVNLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSD 1732 HFVNLD LRANNTKGSLPINVIVFDGKSK +ESAAKSASVYYSQLMCQPILLLDQALVSD Sbjct 2497 HFVNLDYLRANNTKGSLPINVIVFDGKSKWDESAAKSASVYYSQLMCQPILLLDQALVSD 2556 Query 1733 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 1792 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ Sbjct 2557 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 2616 Query 1793 GVVDTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 1852 GVVDTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI Sbjct 2617 GVVDTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 2676 Query 1853 NAQVAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 1912 NAQVAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS Sbjct 2677 NAQVAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 2736 Query 1913 LKGG 1916 LKGG Sbjct 2737 LKGG 2740 >non-structural polyprotein 1a [Bat SARS-like coronavirus] Sequence ID: ATO98156.1 Length: 4382 Range 1: 819 to 2740 Score:3593 bits(9318), Expect:0.0, Method:Compositional matrix adjust., Identities:1763/1924(92%), Positives:1836/1924(95%), Gaps:10/1924(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 +P+KGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 SPIKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPD+EEDC+E E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDDEEDCDEYE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIE---AEPEPE 173 +EEE +C HEYGTE+DY+GLPLEFGASTE EEEEEEDWL DA E EPEPE Sbjct 939 EEEEVPEESCAHEYGTEEDYQGLPLEFGASTEMQ--VEEEEEEDWLGDATELSEHEPEPE 996 Query 174 PLPEEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKA 233 PEEPVNQF GYLKLTDNVAIKC+DIVKEAQ+A PTVIVNAAN HLKHGGGVAGALNKA Sbjct 997 LTPEEPVNQFTGYLKLTDNVAIKCVDIVKEAQNANPTVIVNAANIHLKHGGGVAGALNKA 1056 Query 234 TNGAMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENF 293 TNGAMQ ESD+YI+ NGPLTVGGSCLLSGHNLA+KCLHVVGPNLNAGED+QLLK AYENF Sbjct 1057 TNGAMQKESDDYIKLNGPLTVGGSCLLSGHNLAKKCLHVVGPNLNAGEDIQLLKAAYENF 1116 Query 294 NSQDVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKV 353 NSQD LLAPLLSAGIFGAKPL SL++CV+ VRTQVY+AVNDK+LY+Q+V+DYLDSLKP+V Sbjct 1117 NSQDTLLAPLLSAGIFGAKPLHSLQVCVQTVRTQVYIAVNDKALYEQVVMDYLDSLKPRV 1176 Query 354 ESPNKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 412 E+P +EE PK E+PK + V +KPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN Sbjct 1177 EAPKQEEPPKTEDPKIEEKSVVQKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 1236 Query 413 GKLYQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEV 472 GKLY DSQNMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+V Sbjct 1237 GKLYHDSQNMLRGEDMSFLEKDAPYMVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKV 1296 Query 473 PVAEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLA 532 PV EYITTYPGQGCAGYTLEEAKTAL+KCKSAFYVLPSETPN KEE+LGTVSWNLREMLA Sbjct 1297 PVDEYITTYPGQGCAGYTLEEAKTALRKCKSAFYVLPSETPNAKEEILGTVSWNLREMLA 1356 Query 533 HAEETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 592 HAEETRKLMPIC+DVRAIMATIQRKYKGIK+QEGIVDYGVRFFFYTSKEPVASIITKLNS Sbjct 1357 HAEETRKLMPICMDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNS 1416 Query 593 LNEPLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEY 652 LNEPLVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKT EE+ Sbjct 1417 LNEPLVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEH 1476 Query 653 FVETTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSL 712 FVET SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSL Sbjct 1477 FVETVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPVEFHLDGEVLPLDKLKSL 1536 Query 713 LSLREVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 772 LSLREVKTIKVFTTVDNTNLHT +VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF Sbjct 1537 LSLREVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 1596 Query 773 VLPSDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 832 VLPSDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV Sbjct 1597 VLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 1656 Query 833 LLALQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 892 LLALQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA Sbjct 1657 LLALQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 1716 Query 893 NLESAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQ 952 NLESAKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQ Sbjct 1717 NLESAKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQ 1776 Query 953 QESSFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEY 1012 QESSFVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEY Sbjct 1777 QESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEY 1836 Query 1013 KGPVTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQP 1072 KGPVTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP Sbjct 1837 KGPVTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQP 1896 Query 1073 MPNASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSF 1132 +PNASFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SF Sbjct 1897 LPNASFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASF 1956 Query 1133 KKGAKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNL 1192 KKGAKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNL Sbjct 1957 KKGAKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNL 2016 Query 1193 ACESQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAY 1252 ACESQ TSEEVVENPT+QKE++ECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAY Sbjct 2017 ACESQQPTSEEVVENPTIQKEVLECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAY 2076 Query 1253 VEETSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKK 1312 VE TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ A+ TSNC K+ Sbjct 2077 VENTSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAAITTSNCAKR 2136 Query 1313 CVQRVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVK 1372 Q VF+NYMPYV+TLLFQLCTFTKSTNSRI+ASLPTTIAKNSVK VA+LCLD INYVK Sbjct 2137 LAQCVFNNYMPYVLTLLFQLCTFTKSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYVK 2196 Query 1373 SPKFSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTM 1432 SPKFSKLFTI MWLLLLSICLGSL YVTA LGV LS+ G PSYC GVRE Y+NSSNVTTM Sbjct 2197 SPKFSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNFGAPSYCSGVRESYLNSSNVTTM 2256 Query 1433 DFCQGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFY 1492 DFC+G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFY Sbjct 2257 DFCEGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWFLAYMLFTKFFY 2316 Query 1493 LLGLSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVH 1552 LLGLSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVH Sbjct 2317 LLGLSAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVH 2376 Query 1553 IMDGCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFC 1612 IMDGCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFC Sbjct 2377 IMDGCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFC 2436 Query 1613 AGSTFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLS 1672 GSTFISDEVARDLSLQFKRPINPTDQS+Y+VDSV VKNGALHLYFDKAGQKTYERHPLS Sbjct 2437 TGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVAVKNGALHLYFDKAGQKTYERHPLS 2496 Query 1673 HFVNLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSD 1732 HFVNLDNLRANNTKGSLPINVIVFDGKSKC+ESAA+SASVYYSQLMCQPILLLDQALVSD Sbjct 2497 HFVNLDNLRANNTKGSLPINVIVFDGKSKCDESAARSASVYYSQLMCQPILLLDQALVSD 2556 Query 1733 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 1792 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLK LVATAHSELAKGVALDGVLSTFVSAARQ Sbjct 2557 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKVLVATAHSELAKGVALDGVLSTFVSAARQ 2616 Query 1793 GVVDTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 1852 GVVDTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI Sbjct 2617 GVVDTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 2676 Query 1853 NAQVAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 1912 NAQVAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS Sbjct 2677 NAQVAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 2736 Query 1913 LKGG 1916 LKGG Sbjct 2737 LKGG 2740 >non-structural polyprotein 1a [Bat SARS-like coronavirus] Sequence ID: ATO98119.1 Length: 4382 Range 1: 819 to 2740 Score:3593 bits(9317), Expect:0.0, Method:Compositional matrix adjust., Identities:1765/1924(92%), Positives:1835/1924(95%), Gaps:10/1924(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP KGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APTKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPD+EEDC+E E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDDEEDCDEYE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIE---AEPEPE 173 +EEE +C HEYGTE+DY+GLPLEFGASTE EEEEEEDWL DA E EPEPE Sbjct 939 EEEEVPEESCAHEYGTEEDYQGLPLEFGASTEMQ--VEEEEEEDWLGDATELSEHEPEPE 996 Query 174 PLPEEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKA 233 PEEPVNQF GYLKLTDNVAIKC+DIVKEAQ+A PTVIVNAAN HLKHGGGVAGALNKA Sbjct 997 LTPEEPVNQFTGYLKLTDNVAIKCVDIVKEAQNANPTVIVNAANIHLKHGGGVAGALNKA 1056 Query 234 TNGAMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENF 293 TNGAMQ ESD+YI+ NGPLTVGGSCLLSGHNLA+KCLHVVGPNLNAGED+QLLK AYENF Sbjct 1057 TNGAMQKESDDYIKLNGPLTVGGSCLLSGHNLAKKCLHVVGPNLNAGEDIQLLKAAYENF 1116 Query 294 NSQDVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKV 353 NSQD LLAPLLSAGIFGAKPL SL++CV+ VRTQVY+AVNDK+LY+Q+V+DYLDSLKP+V Sbjct 1117 NSQDTLLAPLLSAGIFGAKPLHSLQVCVQTVRTQVYIAVNDKALYEQVVMDYLDSLKPRV 1176 Query 354 ESPNKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 412 E+P +EE PK E+PK + V +KPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN Sbjct 1177 EAPKQEEPPKTEDPKIEEKSVVQKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 1236 Query 413 GKLYQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEV 472 GKLY DS NMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+V Sbjct 1237 GKLYHDSHNMLRGEDMSFLEKDAPYMVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKV 1296 Query 473 PVAEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLA 532 PV EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPN KEE+LGTVSWNLREMLA Sbjct 1297 PVDEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNAKEEILGTVSWNLREMLA 1356 Query 533 HAEETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 592 HAEETRKLMPIC+DVRAIMATIQRKYKGIK+QEGIVDYGVRFFFYTSKEPVASIITKLNS Sbjct 1357 HAEETRKLMPICMDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNS 1416 Query 593 LNEPLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEY 652 LNEPLVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKT EE+ Sbjct 1417 LNEPLVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEH 1476 Query 653 FVETTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSL 712 FVET SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSL Sbjct 1477 FVETVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPVEFHLDGEVLPLDKLKSL 1536 Query 713 LSLREVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 772 LSLREVKTIKVFTTVDNTNLHT +VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF Sbjct 1537 LSLREVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 1596 Query 773 VLPSDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 832 VLPSDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV Sbjct 1597 VLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 1656 Query 833 LLALQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 892 LLALQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA Sbjct 1657 LLALQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 1716 Query 893 NLESAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQ 952 NLESAKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQ Sbjct 1717 NLESAKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQ 1776 Query 953 QESSFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEY 1012 QESSFVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEY Sbjct 1777 QESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEY 1836 Query 1013 KGPVTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQP 1072 KGPVTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP Sbjct 1837 KGPVTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQP 1896 Query 1073 MPNASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSF 1132 +PNASFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SF Sbjct 1897 LPNASFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASF 1956 Query 1133 KKGAKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNL 1192 KKGAKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNL Sbjct 1957 KKGAKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNL 2016 Query 1193 ACESQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAY 1252 ACESQ TSEEVVENPT+QKE+IECDVKTTEVVGNVILKPS+EGVKVTQEL HEDLMAAY Sbjct 2017 ACESQQPTSEEVVENPTIQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELDHEDLMAAY 2076 Query 1253 VEETSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKK 1312 VE TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ AV TSNC K+ Sbjct 2077 VENTSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAAVTTSNCAKR 2136 Query 1313 CVQRVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVK 1372 VQR+F+NYMPYV+TLLFQLCTFTKSTNSRI+ASLPTTIAKNSV+ VA+LCLD INYVK Sbjct 2137 LVQRMFNNYMPYVLTLLFQLCTFTKSTNSRIRASLPTTIAKNSVRGVARLCLDAGINYVK 2196 Query 1373 SPKFSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTM 1432 SPKFSKLFTI MWLLLLSICLGSL YVTA LGV LS+ G PSYC GVRE Y+NSSNVTTM Sbjct 2197 SPKFSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNFGAPSYCSGVRESYLNSSNVTTM 2256 Query 1433 DFCQGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFY 1492 DFC+G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFY Sbjct 2257 DFCEGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWFLAYMLFTKFFY 2316 Query 1493 LLGLSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVH 1552 LLGLSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVH Sbjct 2317 LLGLSAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVH 2376 Query 1553 IMDGCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFC 1612 IMDGCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFC Sbjct 2377 IMDGCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFC 2436 Query 1613 AGSTFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLS 1672 GSTFISDEVARDLSLQFKRPINPTDQS+Y+VDSV VKNGALHLYFDKAGQKTYERHPLS Sbjct 2437 TGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVAVKNGALHLYFDKAGQKTYERHPLS 2496 Query 1673 HFVNLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSD 1732 HFVNLDNLRANNTKGSLPINVIVFDGKSKC+ESAA+SASVYYSQLMCQPILLLDQ LVSD Sbjct 2497 HFVNLDNLRANNTKGSLPINVIVFDGKSKCDESAARSASVYYSQLMCQPILLLDQTLVSD 2556 Query 1733 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 1792 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ Sbjct 2557 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 2616 Query 1793 GVVDTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 1852 GVVDTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI Sbjct 2617 GVVDTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 2676 Query 1853 NAQVAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 1912 NAQVAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS Sbjct 2677 NAQVAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 2736 Query 1913 LKGG 1916 LKGG Sbjct 2737 LKGG 2740 >non-structural polyprotein 1ab [Bat SARS-like coronavirus] Sequence ID: ATO98130.1 Length: 7073 Range 1: 819 to 2740 Score:3593 bits(9316), Expect:0.0, Method:Compositional matrix adjust., Identities:1766/1924(92%), Positives:1836/1924(95%), Gaps:10/1924(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 +P KGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 SPTKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPD+EEDC+E E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDDEEDCDEYE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIE---AEPEPE 173 +EEE +C HEYGTE+DY+GLPLEFGASTE EEEEEEDWL DA E EPEPE Sbjct 939 EEEEVLEESCAHEYGTEEDYQGLPLEFGASTEMQ--VEEEEEEDWLGDATELSEHEPEPE 996 Query 174 PLPEEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKA 233 PEEPVNQF GYLKLTDNVAIKC+DIVKEAQ+A PTVIVNAAN HLKHGGGVAGALNKA Sbjct 997 LTPEEPVNQFTGYLKLTDNVAIKCVDIVKEAQNANPTVIVNAANIHLKHGGGVAGALNKA 1056 Query 234 TNGAMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENF 293 TNGAMQ ESD+YI+ NGPLTVGGSCLLSGHNLA+KCLHVVGPNLNAGED+QLLK AYENF Sbjct 1057 TNGAMQKESDDYIKLNGPLTVGGSCLLSGHNLAKKCLHVVGPNLNAGEDIQLLKAAYENF 1116 Query 294 NSQDVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKV 353 NSQD LLAPLLSAGIFGAKPL SL++CV+ VRTQVY+AVNDK+LY+Q+V+DYLDSLKP+V Sbjct 1117 NSQDTLLAPLLSAGIFGAKPLHSLQVCVQTVRTQVYIAVNDKALYEQVVMDYLDSLKPRV 1176 Query 354 ESPNKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 412 E+P +EE PK E+PK + V +KPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN Sbjct 1177 EAPKQEEPPKTEDPKIEEKSVVQKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 1236 Query 413 GKLYQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEV 472 GKLY DSQNMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+V Sbjct 1237 GKLYHDSQNMLRGEDMSFLEKDAPYVVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKV 1296 Query 473 PVAEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLA 532 PV EYITTYPGQGCAGYTLEEAKTALKKCKSA YVLPSETPN KEE+LGTVSWNLREMLA Sbjct 1297 PVDEYITTYPGQGCAGYTLEEAKTALKKCKSALYVLPSETPNAKEEILGTVSWNLREMLA 1356 Query 533 HAEETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 592 HAEETRKLMPIC+DVRAIMATIQRKYKGIK+QEGIVDYGVRFFFYTSKEPVASIITKLNS Sbjct 1357 HAEETRKLMPICMDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNS 1416 Query 593 LNEPLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEY 652 LNEPLVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKT EE+ Sbjct 1417 LNEPLVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEH 1476 Query 653 FVETTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSL 712 FVET SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSL Sbjct 1477 FVETVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPVEFHLDGEVLPLDKLKSL 1536 Query 713 LSLREVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 772 LSLREVKTIKVFTTVDNTNLHT +VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF Sbjct 1537 LSLREVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 1596 Query 773 VLPSDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 832 VLPSDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV Sbjct 1597 VLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 1656 Query 833 LLALQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 892 LLALQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA Sbjct 1657 LLALQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 1716 Query 893 NLESAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQ 952 NLESAKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQ Sbjct 1717 NLESAKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQ 1776 Query 953 QESSFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEY 1012 QESSFVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEY Sbjct 1777 QESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEY 1836 Query 1013 KGPVTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQP 1072 KGPVTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP Sbjct 1837 KGPVTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQP 1896 Query 1073 MPNASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSF 1132 +PNASFDNFKLTCSNTKFAD LNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SF Sbjct 1897 LPNASFDNFKLTCSNTKFADALNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASF 1956 Query 1133 KKGAKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNL 1192 KKGAKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNL Sbjct 1957 KKGAKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNL 2016 Query 1193 ACESQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAY 1252 ACESQ TSE VVENPT+QKE++ECDVKTTEVVGNVILKPS+EGVKVTQELGHEDLMAAY Sbjct 2017 ACESQQPTSEAVVENPTIQKEVLECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAY 2076 Query 1253 VEETSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKK 1312 VE TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQTAV TSNC K+ Sbjct 2077 VENTSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQTAVTTSNCAKR 2136 Query 1313 CVQRVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVK 1372 VQR+F+NYMPYV+TLLFQLCTFTKSTNSRI+ASLPTTIAKNSVK VA+LCLD INYVK Sbjct 2137 LVQRMFNNYMPYVLTLLFQLCTFTKSTNSRIRASLPTTIAKNSVKGVARLCLDAGINYVK 2196 Query 1373 SPKFSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTM 1432 SPKFSKLFTI MWLLLLSICLGSL YVTA LGV LS++G PSYC GVRE Y+NSSNVTTM Sbjct 2197 SPKFSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNVGAPSYCSGVRESYLNSSNVTTM 2256 Query 1433 DFCQGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFY 1492 DFC+G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFY Sbjct 2257 DFCEGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWFLAYMLFTKFFY 2316 Query 1493 LLGLSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVH 1552 LLGLSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVH Sbjct 2317 LLGLSAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVH 2376 Query 1553 IMDGCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFC 1612 IMDGC SSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFC Sbjct 2377 IMDGCNSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFC 2436 Query 1613 AGSTFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLS 1672 AGSTFISDEVARDLSLQFKRPINPTDQS+YVVDSV VKNGALHLYFDKAGQKTYERHPLS Sbjct 2437 AGSTFISDEVARDLSLQFKRPINPTDQSSYVVDSVAVKNGALHLYFDKAGQKTYERHPLS 2496 Query 1673 HFVNLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSD 1732 HFVNLDNLR NNTKGSLPINVIVFDGKSKC+ESAAKSASVYYSQLMCQPILLLDQALVSD Sbjct 2497 HFVNLDNLRTNNTKGSLPINVIVFDGKSKCDESAAKSASVYYSQLMCQPILLLDQALVSD 2556 Query 1733 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 1792 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ Sbjct 2557 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 2616 Query 1793 GVVDTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 1852 GVVDTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI Sbjct 2617 GVVDTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 2676 Query 1853 NAQVAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 1912 NAQVAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS Sbjct 2677 NAQVAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 2736 Query 1913 LKGG 1916 LKGG Sbjct 2737 LKGG 2740 >non-structural polyprotein 1a [Bat SARS-like coronavirus] Sequence ID: ATO98180.1 Length: 4382 Range 1: 819 to 2740 Score:3592 bits(9315), Expect:0.0, Method:Compositional matrix adjust., Identities:1764/1924(92%), Positives:1834/1924(95%), Gaps:10/1924(0%) Query 1 APVKGVTFGEDTVLEVQGYKNVKITFELDVRVDKVLNEKCSVYTVESGTEVTEFACVVAE 60 AP KGVTFGEDTVLEVQGYKNV+ITFELD RVDKVLNEKCSVYTVESGTEVTEFACVVAE Sbjct 819 APTKGVTFGEDTVLEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAE 878 Query 61 AVVKTLQPVSDLLTPMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDEEEDCEECE 120 AVVKTLQPVSDLLT MGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPD+EEDC+E E Sbjct 879 AVVKTLQPVSDLLTNMGIDLDEWSVATFYLFDDAGEEKLSSRMYCSFYPPDDEEDCDEYE 938 Query 121 DEEE----TCEHEYGTEDDYKGLPLEFGASTETPHVEEEEEEEDWLDDAIE---AEPEPE 173 +EEE +C HEYGTE+DY+GLPLEFGASTE EEEEEEDWL DA E EPEPE Sbjct 939 EEEEVPEESCAHEYGTEEDYQGLPLEFGASTEMQ--VEEEEEEDWLGDATELSEHEPEPE 996 Query 174 PLPEEPVNQFVGYLKLTDNVAIKCIDIVKEAQSAKPTVIVNAANTHLKHGGGVAGALNKA 233 PEEPVNQF GYLKLTDNVAIKC+DIVKEAQ+A PTVIVNAAN HLKHGGGVAGALNKA Sbjct 997 LTPEEPVNQFTGYLKLTDNVAIKCVDIVKEAQNANPTVIVNAANIHLKHGGGVAGALNKA 1056 Query 234 TNGAMQNESDEYIRQNGPLTVGGSCLLSGHNLAEKCLHVVGPNLNAGEDVQLLKRAYENF 293 TNGAMQ ESD+YI+ NGPLTVGGSCLLSGHNLA+KCLHVVGPNLNAGED+QLLK AYENF Sbjct 1057 TNGAMQKESDDYIKLNGPLTVGGSCLLSGHNLAKKCLHVVGPNLNAGEDIQLLKAAYENF 1116 Query 294 NSQDVLLAPLLSAGIFGAKPLQSLKMCVEIVRTQVYLAVNDKSLYDQIVLDYLDSLKPKV 353 NSQD LLAPLLSAGIFGAKPL SL++CV+ VRTQVY+AVNDK+LY+Q+V+DYLDSLKP+V Sbjct 1117 NSQDTLLAPLLSAGIFGAKPLHSLQVCVQTVRTQVYIAVNDKALYEQVVMDYLDSLKPRV 1176 Query 354 ESPNKEEEPKLEEPKAVQ-PVAEKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 412 E+P +EE PK E+PK + V +KPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN Sbjct 1177 EAPKQEEPPKTEDPKIEEKSVVQKPVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADIN 1236 Query 413 GKLYQDSQNMLRGEDMSFLEKDAPYIVGDVITSGDITCVIIPAKKSGGTTEMLARALKEV 472 GKLY DS NMLRGEDMSFLEKDAPY+VGDVITSGDITCV+IP+KK+GGTTEML+RALK+V Sbjct 1237 GKLYHDSHNMLRGEDMSFLEKDAPYMVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKV 1296 Query 473 PVAEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNEKEEVLGTVSWNLREMLA 532 PV EYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPN KEE+LGTVSWNLREMLA Sbjct 1297 PVDEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSETPNAKEEILGTVSWNLREMLA 1356 Query 533 HAEETRKLMPICLDVRAIMATIQRKYKGIKVQEGIVDYGVRFFFYTSKEPVASIITKLNS 592 HAEETRKLMPIC+DVRAIMATIQRKYKGIK+QEGIVDYGVRFFFYTSKEPVASIITKLNS Sbjct 1357 HAEETRKLMPICMDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNS 1416 Query 593 LNEPLVTMPIGYVTHGLNLEEAARCMRSLKAPAVVSVSSPDAVTAYNGYLTSSSKTPEEY 652 LNEPLVTMPIGYVTHG NLEEAARCMRSLKAPAVVSVSSPDAVT YNGYLTSSSKT EE+ Sbjct 1417 LNEPLVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEH 1476 Query 653 FVETTSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTTGSPIEFHLDGEVLPLDKLKSL 712 FVET SLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHT SP+EFHLDGEVLPLDKLKSL Sbjct 1477 FVETVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPVEFHLDGEVLPLDKLKSL 1536 Query 713 LSLREVKTIKVFTTVDNTNLHTHIVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 772 LSLREVKTIKVFTTVDNTNLHT +VDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF Sbjct 1537 LSLREVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFF 1596 Query 773 VLPSDDTLRSEAFEYYHTIDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 832 VLPSDDTLRSEAFEYYHT+DESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV Sbjct 1597 VLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNNCYLSSV 1656 Query 833 LLALQQVEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 892 LL LQQ+EVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA Sbjct 1657 LLTLQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHA 1716 Query 893 NLESAKRVLNVVCKHCGQKTTTLKGVEAVMYMGTLSYDELKTGVSIPCVCGRNATQYLVQ 952 NLESAKRVLNVVCKHCGQKTTTL GVEAVMYMGTLSYD LKTGVSIPCVCGR+ATQYLVQ Sbjct 1717 NLESAKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQ 1776 Query 953 QESSFVMMSAPPAEYKLQQGAFLCANEYTGNYQCGHYTHITAKETLYRVDGAHLTKMSEY 1012 QESSFVMMSAPPAEYKLQQG FLCANEYTGNYQCGHYTHITAKETLYR+DGAHLTKMSEY Sbjct 1777 QESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEY 1836 Query 1013 KGPVTDVFYKETSYTTAIKPVSYKLDGVTYTEIEPKLDGYYKKGNAYYTEQPIDLVPTQP 1072 KGPVTDVFYKETSYTT IKPVSYKLDGVTYTEIEPKLDGYYKK NAYYTEQPIDLVPTQP Sbjct 1837 KGPVTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQP 1896 Query 1073 MPNASFDNFKLTCSNTKFADDLNQMTGFKKPASRELTVTFFPDLNGDVVAIDYRHYSTSF 1132 +PNASFDNFKLTCSNTKFADDLNQMTGF KPASREL+VTFFPDLNGDVVAIDYRHYS SF Sbjct 1897 LPNASFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYRHYSASF 1956 Query 1133 KKGAKLVHKPILWHINQTTNKTTYKPNIWCLRCLWSTKPVDTSNSFEVLVVEDTQGMDNL 1192 KKGAKL+HKPI+WHINQ T KTT+KPN WCLRCLWSTKPVDTSNSFEVL VEDTQGMDNL Sbjct 1957 KKGAKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNL 2016 Query 1193 ACESQTTTSEEVVENPTVQKEIIECDVKTTEVVGNVILKPSEEGVKVTQELGHEDLMAAY 1252 ACESQ TSEEVVENPT+QKE+IECDVKTTEVVGNVILKPS+EGVKVTQEL HEDLMAAY Sbjct 2017 ACESQQPTSEEVVENPTIQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELDHEDLMAAY 2076 Query 1253 VEETSITIKKPNELSLALGLKTLATHGAAAINSVPWSKILAYVKPFLGQTAVITSNCIKK 1312 VE TSITIKKPNELSLALGLKT+ATHG AAINSVPWSKILAYVKPFLGQ AV TSNC K+ Sbjct 2077 VENTSITIKKPNELSLALGLKTIATHGIAAINSVPWSKILAYVKPFLGQAAVTTSNCAKR 2136 Query 1313 CVQRVFSNYMPYVITLLFQLCTFTKSTNSRIKASLPTTIAKNSVKSVAKLCLDVCINYVK 1372 VQR+F+NYMPYV+TLLFQLCTFTKSTNSRI+ASLPTTIAKNSV+ VA+LCLD INYVK Sbjct 2137 LVQRMFNNYMPYVLTLLFQLCTFTKSTNSRIRASLPTTIAKNSVRGVARLCLDAGINYVK 2196 Query 1373 SPKFSKLFTIVMWLLLLSICLGSLTYVTAVLGVCLSSLGVPSYCDGVRELYINSSNVTTM 1432 SPKFSKLFTI MWLLLLSICLGSL YVTA LGV LS+ G PSYC GVRE Y+NSSNVTTM Sbjct 2197 SPKFSKLFTIAMWLLLLSICLGSLIYVTAALGVLLSNFGAPSYCSGVRESYLNSSNVTTM 2256 Query 1433 DFCQGYFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTFLGLAAEWLLAYMLFTKFFY 1492 DFC+G FPCSVCLSGLDSLDSYPALETIQVTISSYKLDLT LGLAAEW LAYMLFTKFFY Sbjct 2257 DFCEGSFPCSVCLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWFLAYMLFTKFFY 2316 Query 1493 LLGLSAIMQAFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYVWKSYVH 1552 LLGLSAIMQ FFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYY+WKSYVH Sbjct 2317 LLGLSAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVH 2376 Query 1553 IMDGCTSSTCMMCYKRNRATRVECTTIVNGVKRSFYVYANGGRGFCKAHNWNCLNCDTFC 1612 IMDGCTSSTCMMCYKRNRATRVECTTIVNG+KRSFYVYANGGRGFCK HNWNCLNCDTFC Sbjct 2377 IMDGCTSSTCMMCYKRNRATRVECTTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFC 2436 Query 1613 AGSTFISDEVARDLSLQFKRPINPTDQSAYVVDSVTVKNGALHLYFDKAGQKTYERHPLS 1672 GSTFISDEVARDLSLQFKRPINPTDQS+Y+VDSV VKNGALHLYFDKAGQKTYERHPLS Sbjct 2437 TGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVAVKNGALHLYFDKAGQKTYERHPLS 2496 Query 1673 HFVNLDNLRANNTKGSLPINVIVFDGKSKCEESAAKSASVYYSQLMCQPILLLDQALVSD 1732 HFVNLDNLRANNTKGSLPINVIVFDGKSKC+ESAA+SASVYYSQLMCQPILLLDQ LVSD Sbjct 2497 HFVNLDNLRANNTKGSLPINVIVFDGKSKCDESAARSASVYYSQLMCQPILLLDQTLVSD 2556 Query 1733 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 1792 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ Sbjct 2557 VGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQ 2616 Query 1793 GVVDTDVDTKDVIECLKLSHHSDIEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 1852 GVVDTDVDTKDVIECLKLSHHSD+EVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI Sbjct 2617 GVVDTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHI 2676 Query 1853 NAQVAKSHNVSLVWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 1912 NAQVAKSHNVSL+WNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS Sbjct 2677 NAQVAKSHNVSLIWNVKDYMSLSEQLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKIS 2736 Query 1913 LKGG 1916 LKGG Sbjct 2737 LKGG 2740