FastQCFastQC Report
Fri 25 Dec 2020
trimadapt_SRR4240361.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filenametrimadapt_SRR4240361.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7238089
Sequences flagged as poor quality0
Sequence length1-36
%GC30

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA456130.6301801483789436No Hit
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN138430.1912521385133562No Hit
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN133490.18442713263127877No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN106270.14682052127294926No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.8)