Header
Program needle
Rundate Mon Mar 26 2007 19:28:54
Align format srspair
Report file temp_job2.needlep
Results
 
#=======================================
#
# Aligned_sequences: 2
# 1: SYM_ECOLI
# 2: SYM_METJA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 401
# Identity:     147/401 (36.7%)
# Similarity:   219/401 (54.6%)
# Gaps:          29/401 ( 7.2%)
# Score: 677.5
# 
#
#=======================================

SYM_ECOLI          1 KILVTCALPYANGSIHLGHMLE-HIQADVWVRYQRMRGHEVNFICADDAH     49
                      .|:|.||.|.||.:||||... :|.||:..:|.::||.:|..:...|.|
SYM_METJA          1 -YLITTALAYTNGPLHLGHARSTYIPADIIYKYLKLRGEDVIHVGGTDNH     49

SYM_ECOLI         50 GTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQ     99
                     |.||.|.|::.|.:||:::.:...|.:.|.....:.:|.:..|||:.:.:
SYM_METJA         50 GVPITLTAEKEGKSPEEIVEKYHNEIKEDLDLLGVEFDAFGKTHSQIHIE     99

SYM_ECOLI        100 LSELIYSRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQY    149
                     .::..|.:|||||:|..:.|.|.|.|....|||||:|:|.||.| ..:..
SYM_METJA        100 TAQEFYLKLKENGYIYEKEIEQFYCPNCKKFLPDRYVEGICPYC-GGEAR    148

SYM_ECOLI        150 GDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAW    199
                     ||:|||||....|.||.:|..|:....|.:|.::|.||.|.:..:.|:.:
SYM_METJA        149 GDHCEVCGRHLEPFELKDPYCVICKGKPEIRKTKHHFFKLSALKKELEEY    198

SYM_ECOLI        200 TRSG-ALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVW    248
                     .::. .:.|.|.|....|.:. |..||||||..: |..||.. .:..|||
SYM_METJA        199 IKNAKEMPEHVKNMALNWIKE-LHDWDISRDISW-GVPIPGT-NQVMYVW    245

SYM_ECOLI        249 LDAPIGYMGSFKNLCDKRGDSVSFDEYWKK---DSTAELYHFIGKDIVYF    295
                     |:|||||:...|.|          .|.|||   :...::||||||||...
SYM_METJA        246 LEAPIGYISFTKML----------GEIWKKYWLEKDTKIYHFIGKDITVH    285

SYM_ECOLI        296 HSLFWPAML--EGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLN    343
                     |::|||.||  .|| |..|:.:...||:|:.|.|||.|:...:....::.
SYM_METJA        286 HAVFWPGMLIAHGS-FNLPTAVVSGGYLTLEGRKMSTSKRWVVWVKDFVK    334

SYM_ECOLI        344 HFDADSLRYY--YTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRN    391
                     :||||.||||  .:|.|   ..|.|.:.:||..::|.:::|.:.|...|.
SYM_METJA        335 NFDADYLRYYLIMSAPL---FKDCDFSFDDFKNKINNELINIIGNFTHRV    381

SYM_ECOLI        391 -    391
                      
SYM_METJA        382 L    382


Additional Information