TBLASTN 2.2.25+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: gt_genome.fasta
           1 sequences; 3,550,319 total letters



Query= sp|O31617|THIS_BACSU Sulfur carrier protein ThiS OS=Bacillus
subtilis (strain 168) GN=thiS PE=1 SV=1

Length=66
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  CP000557 CP000557.1 Geobacillus thermodenitrificans NG80-2, com...  57.4    2e-10


> CP000557 CP000557.1 Geobacillus thermodenitrificans NG80-2, complete 
genome.
Length=3550319

 Score = 57.4 bits (137),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 29/65 (45%), Positives = 41/65 (64%), Gaps = 0/65 (0%)
 Frame = +2

Query  2       LQLNGKDVKWKKDTGTIQDLLASYQLENKIVIVERNKEIIGKERYHEVELCDRDVIEIVH  61
               L +NG+ +    +  T+ DLL+ ++L+NK+ IVE N  II K  Y    L + D +EIVH
Sbjct  599768  LIVNGETITVPDEVKTVSDLLSHFRLDNKLAIVEVNVRIIQKHEYGITTLANGDRVEIVH  599947

Query  62      FVGGG  66
               FVGGG
Sbjct  599948  FVGGG  599962



Lambda     K      H
   0.319    0.141    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 29584950


  Database: gt_genome.fasta
    Posted date:  Oct 31, 2012  3:02 AM
  Number of letters in database: 3,550,319
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40