TBLASTN 2.8.1+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: X5.fasta
           1,868 sequences; 23,962,143 total letters



Query= H3_YEAST P61830 Histone H3

Length=136
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  scaffold-126                                                        232     9e-72
  scaffold-104                                                        232     9e-72
  unplaced-984                                                        174     1e-57
  scaffold-153                                                        153     1e-48
  scaffold-70                                                         58.5    2e-11
  unplaced-368                                                        57.0    1e-10


> scaffold-126
Length=92370

 Score = 232 bits (591),  Expect = 9e-72, Method: Compositional matrix adjust.
 Identities = 119/136 (88%), Positives = 127/136 (93%), Gaps = 1/136 (1%)
 Frame = -3

Query  1      MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTE  60
              MARTK TARKSTGGKAPRKQLA+KA RKS P+TGGVKKPHRY+PGTVALREIRR+QKSTE
Sbjct  85096  MARTK*TARKSTGGKAPRKQLATKA-RKSTPATGGVKKPHRYRPGTVALREIRRYQKSTE  84920

Query  61     LLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTI  120
              LLIRKLPFQRLVREIAQDFKTDLRF SSAIGAL E+ EAYLVSLFEDTNL AIHAKRVTI
Sbjct  84919  LLIRKLPFQRLVREIAQDFKTDLRF*SSAIGAL*EAAEAYLVSLFEDTNLCAIHAKRVTI  84740

Query  121    QKKDIKLARRLRGERS  136
                KDI+LARR+RGER+
Sbjct  84739  FPKDIQLARRIRGERA  84692


 Score = 57.0 bits (136),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 32/37 (86%), Positives = 34/37 (92%), Gaps = 1/37 (3%)
 Frame = +2

Query  1      MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVK  37
              MARTK TARKSTGGKAPRKQLA+K ARKS P+TGGVK
Sbjct  92261  MARTK*TARKSTGGKAPRKQLATK-ARKSTPATGGVK  92368


> scaffold-104
Length=736462

 Score = 232 bits (591),  Expect = 9e-72, Method: Compositional matrix adjust.
 Identities = 119/136 (88%), Positives = 127/136 (93%), Gaps = 1/136 (1%)
 Frame = +3

Query  1       MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTE  60
               MARTK TARKSTGGKAPRKQLA+KA RKS P+TGGVKKPHRY+PGTVALREIRR+QKSTE
Sbjct  185496  MARTK*TARKSTGGKAPRKQLATKA-RKSTPATGGVKKPHRYRPGTVALREIRRYQKSTE  185672

Query  61      LLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTI  120
               LLIRKLPFQRLVREIAQDFKTDLRF SSAIGAL E+ EAYLVSLFEDTNL AIHAKRVTI
Sbjct  185673  LLIRKLPFQRLVREIAQDFKTDLRF*SSAIGAL*EAAEAYLVSLFEDTNLCAIHAKRVTI  185852

Query  121     QKKDIKLARRLRGERS  136
                 KDI+LARR+RGER+
Sbjct  185853  FPKDIQLARRIRGERA  185900


 Score = 232 bits (591),  Expect = 9e-72, Method: Compositional matrix adjust.
 Identities = 119/136 (88%), Positives = 127/136 (93%), Gaps = 1/136 (1%)
 Frame = -2

Query  1       MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTE  60
               MARTK TARKSTGGKAPRKQLA+KA RKS P+TGGVKKPHRY+PGTVALREIRR+QKSTE
Sbjct  178362  MARTK*TARKSTGGKAPRKQLATKA-RKSTPATGGVKKPHRYRPGTVALREIRRYQKSTE  178186

Query  61      LLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTI  120
               LLIRKLPFQRLVREIAQDFKTDLRF SSAIGAL E+ EAYLVSLFEDTNL AIHAKRVTI
Sbjct  178185  LLIRKLPFQRLVREIAQDFKTDLRF*SSAIGAL*EAAEAYLVSLFEDTNLCAIHAKRVTI  178006

Query  121     QKKDIKLARRLRGERS  136
                 KDI+LARR+RGER+
Sbjct  178005  FPKDIQLARRIRGERA  177958


> unplaced-984
Length=389

 Score = 174 bits (442),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 86/98 (88%), Positives = 92/98 (94%), Gaps = 0/98 (0%)
 Frame = +2

Query  39   PHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVE  98
            PHRY+PGTVALREIRR+QKSTELLIRKLPFQRLVREIAQDFKTDLRF SSAIGAL E+ E
Sbjct  2    PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRF*SSAIGAL*EAAE  181

Query  99   AYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRGERS  136
            AYLVSLFEDTNL AIHAKRVTI  KDI+LARR+RGER+
Sbjct  182  AYLVSLFEDTNLCAIHAKRVTIFPKDIQLARRIRGERA  295


> scaffold-153
Length=574

 Score = 153 bits (387),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 78/89 (88%), Positives = 83/89 (93%), Gaps = 0/89 (0%)
 Frame = -2

Query  48   ALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFED  107
            ALREIRR+QKSTELLIRKLPFQRLVREIAQDFKTDLRF SSAIGAL E+ EAYLVSLFED
Sbjct  573  ALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRF*SSAIGAL*EAAEAYLVSLFED  394

Query  108  TNLAAIHAKRVTIQKKDIKLARRLRGERS  136
            TNL AIHAKRVTI  KDI+LARR+RGER+
Sbjct  393  TNLCAIHAKRVTIFPKDIQLARRIRGERA  307


> scaffold-70
Length=635

 Score = 58.5 bits (140),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 33/38 (87%), Positives = 35/38 (92%), Gaps = 1/38 (3%)
 Frame = +3

Query  1    MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKK  38
            MARTK TARKSTGGKAPRKQLA+K ARKS P+TGGVKK
Sbjct  525  MARTK*TARKSTGGKAPRKQLATK-ARKSTPATGGVKK  635


> unplaced-368
Length=899

 Score = 57.0 bits (136),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 32/37 (86%), Positives = 34/37 (92%), Gaps = 1/37 (3%)
 Frame = +1

Query  1    MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVK  37
            MARTK TARKSTGGKAPRKQLA+K ARKS P+TGGVK
Sbjct  790  MARTK*TARKSTGGKAPRKQLATK-ARKSTPATGGVK  897



Lambda      K        H        a         alpha
   0.318    0.130    0.346    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 383418385


  Database: X5.fasta
    Posted date:  Mar 19, 2022  3:50 PM
  Number of letters in database: 23,962,143
  Number of sequences in database:  1,868



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40