Основная информация[0]
Burkholderia humptydooensis sp. nov. (hump.ty.doo.en'sis. L. gen. adj. humptydooensis,
pertaining to Humpty Doo, a small town in Northern Territory of Australia, where the first member of this species was isolated).
Bacilli, 0.4 to 0.8 μm in diameter and 2 to 3 μm in length, arranged individually or in irregular clusters.
The organism is Gram negative with bipolar staining, motile, and non-spore forming. Growth is observed in a temperature range of 25
to 42°C within 24 to 48 h on various standard solid media. Within 24 h, small colonies
(0.5 to 1 mm) are formed on nonselective media (Columbia blood and Standard I) and after 48 h
also on selective media (Ashdown's, MacConkey).
Вставка 1.Сиквенс гидропероксидазы в формате FASTA.[1]
>KST73321.1 hydroperoxidase
MSNEAKCPFHHAAGNGTSNRDWWPDQLDLSILHQHSSLSDPMDKDFNYAQAFEKLDLAAVKRDLHALMTT
SQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFAPLNSWPDNANLDKARRLLWPIKQKYG
RSISWADLLILTGNVALESMGFKTFGFAGGRADTWEPEDVYWGSEKIWLELSGGPNSRYSGDRHLENPLA
AVQMGLIYVNPEGPDGKPDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTHGAGPASNVGPEPEAA
GIEAQGLGWKSTYGTGKGADAITSGLEVTWTTTPTQWSHNFFENLFGYEWELTKSPAGAHQWVAKDADAV
IPDAFDPSKKHRPTMLTTDLSLRFDPAYEKISRRFHEHPDQFADAFARAWFKLTHRDMGPRARYLGPEVP
AEELLWQDPIPAVDHPLIDAADVAGLKAKVLASGLSVSQLVSTAWAAASTFRGSDKRGGANGARIRLAPQ
KDWEANQPERLAKVLETLEGIQKAFNAAQSGGKRVSLADLIVLAGCAGVEQAAKNAGHPVTVPFAPGRAD
ASQEQTDVESVAVLEPVADGFRNYLKGKYRVPAEVLLVDKAQLLTLSAPEMTVLLGGLRVLGANVGQSRH
GVFTAREQALTNDFFVNLLDMGTEWKPTAADADVFEGRDRATGELKWTGTRVDLVFGSHAQLRALAEVYG
SADAQEKFVRDFVAVWNKVMNLDRFDLA
Таблица 1. Описание белка гидропероксидазы из генома бактерии Burkholderia humptydooensis
| Параметр |
Значение |
| Идентификатор белка |
KST73321.1 |
| Идентификатор генома |
LNPD01000001.1 |
| Название белка |
hydroperoxidase |
| Координаты гена в геноме |
768529..770715 |
| Длина гена (в парах нуклеотидов) |
2187 |
| Цепь (прямая или обратная) |
прямая |
| Длина белка (в аминокислотных остатках) |
728 |
