UCSC
To perform the task, the protein Trichohyalin was taken. Then, the UCSC genome browser was used.
| Short name | (TCHH) | ||
| Full name | Homo sapiens trichohyalin | ||
| Strain | - | ||
| Chromosome | 1 | ||
| Chromosome arm | q21.3 | ||
| Coordinates | 152,106,317-152,115,454 | ||
| A number of alternative products | 1 | ||
| Product | ENST00000614923.1 | 3 exons (2 coding) | 1943 aa (Translation length) |
| Product | ENST00000368804.5 | 2 exons | 1943 aa (Translation length) |
SNPs are marked with colors according to their location and the effect they have on the transcript. Red is the missense variant (insertion of another amino acid), black is substitutions that occurred in introns and blue is in non-coding regions.
Ensembl
Distmat results
During the search for polymorphisms, since the task required to consider the most common polymorphisms, a threshold was established for the frequency of occurrence of this polymorphism in the population - not less than 0.001. Further, the number of remaining single nucleotide polymorphisms was calculated - 100 (insertions and deletions were excluded).