Phylogenetic tree
Name Mnemonics
Pasteurella multocida PASMU
Polynucleobacter asymbioticus POLAQ
Proteus mirabilis PROMH
Pseudomonas aeruginosa PSEAE
Pseudomonas mendocina PSEMY
Rhizobium meliloti RHIME
Roseobacter denitrificans ROSDO

Newick

((((Proteus_mirabilis_(PROMH), Pasteurella_multocida_(PASMU)), (Pseudomonas_aeruginosa_(PSEAE), Pseudomonas_mendocina_(PSEMY))), (Polynucleobacter_asymbioticus_(POLAQ))), (Rhizobium_meliloti_(RHIME), Roseobacter_denitrificans_(ROSDO)));

Image 1. Phylogenetic tree

Tree branches

This tree has 4 nontrivial branches: 1) {PASMU,PROMH} vs {POLAQ,PSEAE,PSEMY,RHIME,ROSDO}
2) {PASMU,PROMH,PSEMY,PSEAE} vs {POLAQ,RHIME,ROSDO}
3) {PASMU,PROMH,PSEMY,PSEAE,POLAQ} vs {RHIME,ROSDO}
4) {PSEAE,PSEMY} vs {POLAQ,PSEAE,PSEMY,RHIME,ROSDO}

Task 2. Taxonomy

Name Mnemonics NCBI taxonomy
Pasteurella multocida PASMU cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Pasteurella
Polynucleobacter asymbioticus POLAQ cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter
Proteus mirabilis PROMHcellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Morganellaceae; Proteus
Pseudomonas aeruginosa PSEAEcellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group
Pseudomonas mendocina PSEMY cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group
Rhizobium meliloti RHIME cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium
Roseobacter denitrificans ROSDO cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter

1) {PSEAE,PSEMY} - Pseudomonas aeruginosa group
2) {PASMU,PROMH,PSEMY,PSEAE} - Gammaproteobacteria class
3) {RHIME,ROSDO} - Alphaproteobacteria class

Contacts: vorobiovarita@kodomo.fbb.msu.ru

© vorobiovarita 2018