Результаты подсчета Ka/Ks программой PAML для генов L36552 и L36554.

PAL2NAL output

CLUSTAL W multiple sequence alignment

L36552        atgaggtctttggtgcttctctgtgttttgctgatggcaatatgtgcggcggacaaaaaa
L36554        atgaggtctttggtgcttctctgtgttttgctgatggcaatatgtgcggcggacaaaaaa

L36552        tccacggtctcgaaggaaaatgcagccgcaatgaaggtagcgatgataaagtttttggat
L36554        acctcggtctcgaaggaaaatgaagccgcaatgaaggtagcgatgatgaagtttttggat

L36552        tcgaggacggatagattcaaaaaacgcattgagaagattggatatccaataacccctccg
L36554        atgaaggcgggtgtattcaaagaaatcattgaggatatgggatatccaataacccctccg

L36552        caatatacaactctactatactacaacagagagagattgatggattggtgccataactac
L36554        caatggacaactctactgtactacaacagagagagattgattgaattttgccgttccttc

L36552        gttgaagtatccaaaaagattatattgttgggaggtaacaaattaaataagaagaacttc
L36554        cttgcattgtccaaaaagattatattgctgggaggtaacaaattaaataaggcgaacttc

L36552        gctaggatgggtcgaatcattggctggaaaaaccagtggattttgaaaaggaggcaatgg
L36554        gctaggatgggtcgaatccttggctggaaaagccagtgggctgtgagacagaggcaatgg

L36552        cacatggtcagagtgatgaggcgctataaagcttctgcaatagctaaaaagatcgtcgcc
L36554        gggatggtcagagtgtcgaggcgccatacaagtactgcaatagctaaaaggatcgtcgcc

L36552        atgaaagttgctgacctaccctgtaac
L36554        atgaaagttgctgacctaccctgtaac






Synonymous (KS) and non-synonymous (KA) substitution rates calcualted by codeml in the PAML package:
Ks и Ka посчитаны программой PAML:
	KS = 0.0269
	KA = 0.1733
	KA/KS = 6.4390