FastQCFastQC Report
Fri 4 Feb 2022
SRR4240356.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4240356.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7511529
Sequences flagged as poor quality0
Sequence length36
%GC29

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA496020.6603449177923696No Hit
GATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAA334070.4447430077152068Illumina Single End Adapter 1 (100% over 33bp)
GATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGGAT278370.3705903285469576Illumina Single End Adapter 1 (100% over 33bp)
GATCGGAAGAGCTCGTATGCCGTCTTCTGCTTAGAT216700.2884898667102264Illumina Single End Adapter 1 (96% over 32bp)
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN154490.20567050995875807No Hit
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN148750.19802892327247887No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN105160.13999812821064792No Hit
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN82560.10991104474202255No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.8)