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Transcription in the prpC-yloQ region in Bacillus subtilis. Arch Microbiol. 2005 Sep;183(6):421-30. Epub 2005 Oct 13. PubMed PMID: 16025310. 653: Carrasco B, Ayora S, Lurz R, Alonso JC. Bacillus subtilis RecU Holliday-junction resolvase modulates RecA activities. Nucleic Acids Res. 2005 Jul 15;33(12):3942-52. Print 2005. PubMed PMID: 16024744; PubMed Central PMCID: PMC1176016. 654: Sato M, Ohtsuka M, Ohmi Y. Usefulness of repeated GenomiPhi, a phi29 DNA polymerase-based rolling circle amplification kit, for generation of large amounts of plasmid DNA. Biomol Eng. 2005 Oct;22(4):129-32. PubMed PMID: 16023891. 655: Wijffels G, Dalrymple B, Kongsuwan K, Dixon NE. Conservation of eubacterial replicases. IUBMB Life. 2005 Jun;57(6):413-9. Review. PubMed PMID: 16012050. 656: Kidane D, Graumann PL. Intracellular protein and DNA dynamics in competent Bacillus subtilis cells. Cell. 2005 Jul 15;122(1):73-84. PubMed PMID: 16009134. 657: Hove-Jensen B, Bentsen AK, Harlow KW. Catalytic residues Lys197 and Arg199 of Bacillus subtilis phosphoribosyl diphosphate synthase. Alanine-scanning mutagenesis of the flexible catalytic loop. FEBS J. 2005 Jul;272(14):3631-9. PubMed PMID: 16008562. 658: Moll WD, Guo P. Translocation of nicked but not gapped DNA by the packaging motor of bacteriophage phi29. J Mol Biol. 2005 Aug 5;351(1):100-7. PubMed PMID: 16002084. 659: Bae E, Phillips GN Jr. Identifying and engineering ion pairs in adenylate kinases. Insights from molecular dynamics simulations of thermophilic and mesophilic homologues. J Biol Chem. 2005 Sep 2;280(35):30943-8. Epub 2005 Jul 1. PubMed PMID: 15995248. 660: Satomura T, Shimura D, Asai K, Sadaie Y, Hirooka K, Fujita Y. Enhancement of glutamine utilization in Bacillus subtilis through the GlnK-GlnL two-component regulatory system. J Bacteriol. 2005 Jul;187(14):4813-21. PubMed PMID: 15995196; PubMed Central PMCID: PMC1169493. 661: Campos-Guillén J, Bralley P, Jones GH, Bechhofer DH, Olmedo-Alvarez G. Addition of poly(A) and heteropolymeric 3' ends in Bacillus subtilis wild-type and polynucleotide phosphorylase-deficient strains. J Bacteriol. 2005 Jul;187(14):4698-706. PubMed PMID: 15995184; PubMed Central PMCID: PMC1169516. 662: Nowotny M, Gaidamakov SA, Crouch RJ, Yang W. Crystal structures of RNase H bound to an RNA/DNA hybrid: substrate specificity and metal-dependent catalysis. Cell. 2005 Jul 1;121(7):1005-16. PubMed PMID: 15989951. 663: Forino M, Johnson S, Wong TY, Rozanov DV, Savinov AY, Li W, Fattorusso R, Becattini B, Orry AJ, Jung D, Abagyan RA, Smith JW, Alibek K, Liddington RC, Strongin AY, Pellecchia M. Efficient synthetic inhibitors of anthrax lethal factor. Proc Natl Acad Sci U S A. 2005 Jul 5;102(27):9499-504. Epub 2005 Jun 27. PubMed PMID: 15983377; PubMed Central PMCID: PMC1160517. 664: Fraimow H, Knob C, Herrero IA, Patel R. Putative VanRS-like two-component regulatory system associated with the inducible glycopeptide resistance cluster of Paenibacillus popilliae. Antimicrob Agents Chemother. 2005 Jul;49(7):2625-33. PubMed PMID: 15980329; PubMed Central PMCID: PMC1168687. 665: Davies KM, Dedman AJ, van Horck S, Lewis PJ. The NusA:RNA polymerase ratio is increased at sites of rRNA synthesis in Bacillus subtilis. Mol Microbiol. 2005 Jul;57(2):366-79. PubMed PMID: 15978071. 666: Haas AL, Laun NP, Begley TP. Thi20, a remarkable enzyme from Saccharomyces cerevisiae with dual thiamin biosynthetic and degradation activities. Bioorg Chem. 2005 Aug;33(4):338-44. PubMed PMID: 15967475. 667: Murthy KK, Mahboubi VS, Santiago A, Barragan MT, Knöll R, Schultheiss HP, O'Connor DT, Schork NJ, Rana BK. Assessment of multiple displacement amplification for polymorphism discovery and haplotype determination at a highly polymorphic locus, MC1R. Hum Mutat. 2005 Aug;26(2):145-52. 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The bacterial helicase-primase interaction: a common structural/functional module. Structure. 2005 Jun;13(6):839-44. Review. PubMed PMID: 15939015. 677: Raghunathan A, Ferguson HR Jr, Bornarth CJ, Song W, Driscoll M, Lasken RS. Genomic DNA amplification from a single bacterium. Appl Environ Microbiol. 2005 Jun;71(6):3342-7. PubMed PMID: 15933038; PubMed Central PMCID: PMC1151817. 678: Schiefner A, Gerber K, Seitz S, Welte W, Diederichs K, Boos W. The crystal structure of Mlc, a global regulator of sugar metabolism in Escherichia coli. J Biol Chem. 2005 Aug 12;280(32):29073-9. Epub 2005 Jun 1. PubMed PMID: 15929984. 679: Hayashi M, Ogura Y, Harry EJ, Ogasawara N, Moriya S. Bacillus subtilis YabA is involved in determining the timing and synchrony of replication initiation. FEMS Microbiol Lett. 2005 Jun 1;247(1):73-9. PubMed PMID: 15927750. 680: Halbedel S, Stülke J. Dual phosphorylation of Mycoplasma pneumoniae HPr by Enzyme I and HPr kinase suggests an extended phosphoryl group susceptibility of HPr. FEMS Microbiol Lett. 2005 Jun 15;247(2):193-8. PubMed PMID: 15927419. 681: Yebra MJ, Viana R, Monedero V, Deutscher J, Pérez-Martínez G. An esterase gene from Lactobacillus casei cotranscribed with genes encoding a phosphoenolpyruvate:sugar phosphotransferase system and regulated by a LevR-like activator and sigma54 factor. J Mol Microbiol Biotechnol. 2004;8(2):117-28. PubMed PMID: 15925903. 682: Ryckelynck M, Giegé R, Frugier M. tRNAs and tRNA mimics as cornerstones of aminoacyl-tRNA synthetase regulations. Biochimie. 2005 Sep-Oct;87(9-10):835-45. Review. PubMed PMID: 15925436. 683: Gardiner L, Coyle BJ, Chan WC, Soultanas P. Discovery of antagonist peptides against bacterial helicase-primase interaction in B. stearothermophilus by reverse yeast three-hybrid. Chem Biol. 2005 May;12(5):595-604. 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Bacillus subtilis RecN binds and protects 3'-single-stranded DNA extensions in the presence of ATP. Nucleic Acids Res. 2005 Apr 22;33(7):2343-50. Print 2005. PubMed PMID: 15849320; PubMed Central PMCID: PMC1084328. 689: Van der Auwera G, Mahillon J. TnXO1, a germination-associated class II transposon from Bacillus anthracis. Plasmid. 2005 May;53(3):251-7. PubMed PMID: 15848228. 690: Brittingham KC, Ruthel G, Panchal RG, Fuller CL, Ribot WJ, Hoover TA, Young HA, Anderson AO, Bavari S. Dendritic cells endocytose Bacillus anthracis spores: implications for anthrax pathogenesis. J Immunol. 2005 May 1;174(9):5545-52. PubMed PMID: 15843553. 691: Yudkin MD, Clarkson J. Differential gene expression in genetically identical sister cells: the initiation of sporulation in Bacillus subtilis. Mol Microbiol. 2005 May;56(3):578-89. Review. PubMed PMID: 15819616. 692: Easterday WR, Van Ert MN, Simonson TS, Wagner DM, Kenefic LJ, Allender CJ, Keim P. 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Human alpha-defensins neutralize anthrax lethal toxin and protect against its fatal consequences. Proc Natl Acad Sci U S A. 2005 Mar 29;102(13):4830-5. Epub 2005 Mar 16. PubMed PMID: 15772169; PubMed Central PMCID: PMC555714. 709: Ben-Zeev E, Fux L, Amster-Choder O, Eisenstein M. Experimental and computational characterization of the dimerization of the PTS-regulation domains of BglG from Escherichia coli. J Mol Biol. 2005 Apr 8;347(4):693-706. PubMed PMID: 15769463. 710: Srivastava P, Deb JK. Gene expression systems in corynebacteria. Protein Expr Purif. 2005 Apr;40(2):221-9. Review. PubMed PMID: 15766862. 711: Vanhercke T, Ampe C, Tirry L, Denolf P. Reducing mutational bias in random protein libraries. Anal Biochem. 2005 Apr 1;339(1):9-14. PubMed PMID: 15766704. 712: Nahrstedt H, Schröder C, Meinhardt F. Evidence for two recA genes mediating DNA repair in Bacillus megaterium. Microbiology. 2005 Mar;151(Pt 3):775-87. 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Diversity in chemotaxis mechanisms among the bacteria and archaea. Microbiol Mol Biol Rev. 2004 Jun;68(2):301-19. Review. PubMed PMID: 15187186; PubMed Central PMCID: PMC419924. 817: Kidane D, Sanchez H, Alonso JC, Graumann PL. Visualization of DNA double-strand break repair in live bacteria reveals dynamic recruitment of Bacillus subtilis RecF, RecO and RecN proteins to distinct sites on the nucleoids. Mol Microbiol. 2004 Jun;52(6):1627-39. PubMed PMID: 15186413. 818: De Clerck E, Vanhoutte T, Hebb T, Geerinck J, Devos J, De Vos P. Isolation, characterization, and identification of bacterial contaminants in semifinal gelatin extracts. Appl Environ Microbiol. 2004 Jun;70(6):3664-72. PubMed PMID: 15184171; PubMed Central PMCID: PMC427776. 819: Gruenewald S, Mootz HD, Stehmeier P, Stachelhaus T. In vivo production of artificial nonribosomal peptide products in the heterologous host Escherichia coli. Appl Environ Microbiol. 2004 Jun;70(6):3282-91. 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Genome coverage and sequence fidelity of phi29 polymerase-based multiple strand displacement whole genome amplification. Nucleic Acids Res. 2004 May 18;32(9):e71. PubMed PMID: 15150323; PubMed Central PMCID: PMC419624. 828: Melnick J, Lis E, Park JH, Kinsland C, Mori H, Baba T, Perkins J, Schyns G, Vassieva O, Osterman A, Begley TP. Identification of the two missing bacterial genes involved in thiamine salvage: thiamine pyrophosphokinase and thiamine kinase. J Bacteriol. 2004 Jun;186(11):3660-2. PubMed PMID: 15150256; PubMed Central PMCID: PMC415752. 829: Vitreschak AG, Lyubetskaya EV, Shirshin MA, Gelfand MS, Lyubetsky VA. Attenuation regulation of amino acid biosynthetic operons in proteobacteria: comparative genomics analysis. FEMS Microbiol Lett. 2004 May 15;234(2):357-70. PubMed PMID: 15135544. 830: Hesseling AC, Schaaf HS, Victor T, Beyers N, Marais BJ, Cotton MF, Wiid I, Gie RP, van Helden P, Warren RM. Resistant Mycobacterium bovis Bacillus Calmette-Guérin disease: implications for management of Bacillus Calmette-Guérin Disease in human immunodeficiency virus-infected children. Pediatr Infect Dis J. 2004 May;23(5):476-9. PubMed PMID: 15131480. 831: Mattoo S, Yuk MH, Huang LL, Miller JF. Regulation of type III secretion in Bordetella. Mol Microbiol. 2004 May;52(4):1201-14. PubMed PMID: 15130135. 832: Underwood SA, Buszko ML, Shanmugam KT, Ingram LO. Lack of protective osmolytes limits final cell density and volumetric productivity of ethanologenic Escherichia coli KO11 during xylose fermentation. Appl Environ Microbiol. 2004 May;70(5):2734-40. PubMed PMID: 15128526; PubMed Central PMCID: PMC404403. 833: Reva ON, Dixelius C, Meijer J, Priest FG. Taxonomic characterization and plant colonizing abilities of some bacteria related to Bacillus amyloliquefaciens and Bacillus subtilis. FEMS Microbiol Ecol. 2004 May 1;48(2):249-59. PubMed PMID: 19712408. 834: Messaoudi S, Sancelme M, Polard-Housset V, Aboab B, Moreau P, Prudhomme M. Synthesis and biological evaluation of oxindoles and benzimidazolinones derivatives. Eur J Med Chem. 2004 May;39(5):453-8. PubMed PMID: 15110971. 835: Konno H, Suzuki T, Bald D, Yoshida M, Hisabori T. Significance of the epsilon subunit in the thiol modulation of chloroplast ATP synthase. Biochem Biophys Res Commun. 2004 May 21;318(1):17-24. PubMed PMID: 15110747. 836: Sasaki M, Kurusu Y. Analysis of spontaneous base substitutions generated in mutator strains of Bacillus subtilis. FEMS Microbiol Lett. 2004 May 1;234(1):37-42. PubMed PMID: 15109717. 837: Bae E, Phillips GN Jr. Structures and analysis of highly homologous psychrophilic, mesophilic, and thermophilic adenylate kinases. J Biol Chem. 2004 Jul 2;279(27):28202-8. Epub 2004 Apr 20. PubMed PMID: 15100224. 838: Bent CJ, Isaacs NW, Mitchell TJ, Riboldi-Tunnicliffe A. Crystal structure of the response regulator 02 receiver domain, the essential YycF two-component system of Streptococcus pneumoniae in both complexed and native states. J Bacteriol. 2004 May;186(9):2872-9. PubMed PMID: 15090529; PubMed Central PMCID: PMC387779. 839: Woodbury RL, Luo T, Grant L, Haldenwang WG. Mutational analysis of RsbT, an activator of the Bacillus subtilis stress response transcription factor, sigmaB. J Bacteriol. 2004 May;186(9):2789-97. PubMed PMID: 15090521; PubMed Central PMCID: PMC387813. 840: Albanesi D, Mansilla MC, de Mendoza D. The membrane fluidity sensor DesK of Bacillus subtilis controls the signal decay of its cognate response regulator. J Bacteriol. 2004 May;186(9):2655-63. PubMed PMID: 15090506; PubMed Central PMCID: PMC387786. 841: Ramström H, Bourotte M, Philippe C, Schmitt M, Haiech J, Bourguignon JJ. Heterocyclic bis-cations as starting hits for design of inhibitors of the bifunctional enzyme histidine-containing protein kinase/phosphatase from Bacillus subtilis. J Med Chem. 2004 Apr 22;47(9):2264-75. PubMed PMID: 15084125. 842: Lee LV, Bower KE, Liang FS, Shi J, Wu D, Sucheck SJ, Vogt PK, Wong CH. Inhibition of the proteolytic activity of anthrax lethal factor by aminoglycosides. J Am Chem Soc. 2004 Apr 21;126(15):4774-5. PubMed PMID: 15080670. 843: Barekzi N, Joshi S, Irwin S, Ontl T, Schweizer HP. Genetic characterization of pcpS, encoding the multifunctional phosphopantetheinyl transferase of Pseudomonas aeruginosa. Microbiology. 2004 Apr;150(Pt 4):795-803. PubMed PMID: 15073290. 844: Blackwood KS, Turenne CY, Harmsen D, Kabani AM. Reassessment of sequence-based targets for identification of bacillus species. J Clin Microbiol. 2004 Apr;42(4):1626-30. PubMed PMID: 15071016; PubMed Central PMCID: PMC387569. 845: Mofid MR, Finking R, Essen LO, Marahiel MA. Structure-based mutational analysis of the 4'-phosphopantetheinyl transferases Sfp from Bacillus subtilis: carrier protein recognition and reaction mechanism. Biochemistry. 2004 Apr 13;43(14):4128-36. PubMed PMID: 15065855. 846: Nakajima N, Nakano T, Harada F, Taniguchi H, Yokoyama I, Hirose J, Daikoku E, Sano K. Evaluation of disinfective potential of reactivated free chlorine in pooled tap water by electrolysis. J Microbiol Methods. 2004 May;57(2):163-73. PubMed PMID: 15063056. 847: Maughan H, Galeano B, Nicholson WL. Novel rpoB mutations conferring rifampin resistance on Bacillus subtilis: global effects on growth, competence, sporulation, and germination. J Bacteriol. 2004 Apr;186(8):2481-6. PubMed PMID: 15060052; PubMed Central PMCID: PMC412138. 848: Hsu HH, Huang WC, Chen JP, Huang LY, Wu CF, Chang BY. Properties of Bacillus subtilis sigma A factors with region 1.1 and the conserved Arg-103 at the N terminus of region 1.2 deleted. J Bacteriol. 2004 Apr;186(8):2366-75. PubMed PMID: 15060039; PubMed Central PMCID: PMC412165. 849: Mesak LR, Mesak FM, Dahl MK. Expression of a novel gene, gluP, is essential for normal Bacillus subtilis cell division and contributes to glucose export. BMC Microbiol. 2004 Mar 30;4:13. PubMed PMID: 15050034; PubMed Central PMCID: PMC408461. 850: De Berardinis P, Sartorius R, Caivano A, Mascolo D, Domingo GJ, Del Pozzo G, Gaubin M, Perham RN, Piatier-Tonneau D, Guardiola J. Use of fusion proteins and procaryotic display systems for delivery of HIV-1 antigens: development of novel vaccines for HIV-1 infection. Curr HIV Res. 2003 Oct;1(4):441-6. PubMed PMID: 15049429. 851: Echenique J, Kadioglu A, Romao S, Andrew PW, Trombe MC. Protein serine/threonine kinase StkP positively controls virulence and competence in Streptococcus pneumoniae. Infect Immun. 2004 Apr;72(4):2434-7. PubMed PMID: 15039376; PubMed Central PMCID: PMC375209. 852: Kato C, Kurihara T, Kobashi N, Yamane H, Nishiyama M. Conversion of feedback regulation in aspartate kinase by domain exchange. Biochem Biophys Res Commun. 2004 Apr 9;316(3):802-8. PubMed PMID: 15033471. 853: Rodríguez I, Lázaro JM, Salas M, De Vega M. phi29 DNA polymerase-terminal protein interaction. Involvement of residues specifically conserved among protein-primed DNA polymerases. J Mol Biol. 2004 Apr 2;337(4):829-41. PubMed PMID: 15033354. 854: Homerova D, Bischoff M, Dumolin A, Kormanec J. Optimization of a two-plasmid system for the identification of promoters recognized by RNA polymerase containing Staphylococcus aureus alternative sigma factor sigmaB. FEMS Microbiol Lett. 2004 Mar 19;232(2):173-9. PubMed PMID: 15033236. 855: Hsu LC, Park JM, Zhang K, Luo JL, Maeda S, Kaufman RJ, Eckmann L, Guiney DG, Karin M. The protein kinase PKR is required for macrophage apoptosis after activation of Toll-like receptor 4. Nature. 2004 Mar 18;428(6980):341-5. PubMed PMID: 15029200. 856: Geng H, Nakano S, Nakano MM. Transcriptional activation by Bacillus subtilis ResD: tandem binding to target elements and phosphorylation-dependent and -independent transcriptional activation. J Bacteriol. 2004 Apr;186(7):2028-37. PubMed PMID: 15028686; PubMed Central PMCID: PMC374413. 857: Wang Z, Hicks DB, Guffanti AA, Baldwin K, Krulwich TA. Replacement of amino acid sequence features of a- and c-subunits of ATP synthases of Alkaliphilic Bacillus with the Bacillus consensus sequence results in defective oxidative phosphorylation and non-fermentative growth at pH 10.5. J Biol Chem. 2004 Jun 18;279(25):26546-54. Epub 2004 Mar 15. PubMed PMID: 15024007. 858: Rowland SL, Burkholder WF, Cunningham KA, Maciejewski MW, Grossman AD, King GF. Structure and mechanism of action of Sda, an inhibitor of the histidine kinases that regulate initiation of sporulation in Bacillus subtilis. Mol Cell. 2004 Mar 12;13(5):689-701. PubMed PMID: 15023339. 859: Mesak LR, Mesak FM, Dahl MK. Bacillus subtilis GlcK activity requires cysteines within a motif that discriminates microbial glucokinases into two lineages. BMC Microbiol. 2004 Feb 3;4:6. PubMed PMID: 15018644; PubMed Central PMCID: PMC365027. 860: Gagyi C, Ionescu M, Gounon P, Sakamoto H, Rousselle JC, Laurent-Winter C. Identification and immunochemical location of UMP kinase from Bacillus subtilis. Curr Microbiol. 2004 Jan;48(1):62-7. PubMed PMID: 15018105. 861: Watanabe T, Hashimoto Y, Yamamoto K, Hirao K, Ishihama A, Hino M, Utsumi R. Isolation and characterization of inhibitors of the essential histidine kinase, YycG in Bacillus subtilis and Staphylococcus aureus. J Antibiot (Tokyo). 2003 Dec;56(12):1045-52. PubMed PMID: 15015732. 862: Cordoba-Rodriguez R, Fang H, Lankford CS, Frucht DM. Anthrax lethal toxin rapidly activates caspase-1/ICE and induces extracellular release of interleukin (IL)-1beta and IL-18. J Biol Chem. 2004 May 14;279(20):20563-6. Epub 2004 Mar 9. PubMed PMID: 15010463. 863: Dervyn E, Noirot-Gros MF, Mervelet P, McGovern S, Ehrlich SD, Polard P, Noirot P. The bacterial condensin/cohesin-like protein complex acts in DNA repair and regulation of gene expression. Mol Microbiol. 2004 Mar;51(6):1629-40. PubMed PMID: 15009890. 864: Fukao T. Immune system paralysis by anthrax lethal toxin: the roles of innate and adaptive immunity. Lancet Infect Dis. 2004 Mar;4(3):166-70. Review. PubMed PMID: 14998502. 865: Zhang X, Wehbi H, Roberts MF. Cross-linking phosphatidylinositol-specific phospholipase C traps two activating phosphatidylcholine molecules on the enzyme. J Biol Chem. 2004 May 7;279(19):20490-500. Epub 2004 Mar 2. PubMed PMID: 14996830. 866: Baruah A, Lindsey B, Zhu Y, Nakano MM. Mutational analysis of the signal-sensing domain of ResE histidine kinase from Bacillus subtilis. J Bacteriol. 2004 Mar;186(6):1694-704. PubMed PMID: 14996800; PubMed Central PMCID: PMC355969. 867: Yoshimura M, Asai K, Sadaie Y, Yoshikawa H. Interaction of Bacillus subtilis extracytoplasmic function (ECF) sigma factors with the N-terminal regions of their potential anti-sigma factors. Microbiology. 2004 Mar;150(Pt 3):591-9. PubMed PMID: 14993308. 868: Bandyopadhyay S, Allison WS. The ionic track in the F1-ATPase from the thermophilic Bacillus PS3. Biochemistry. 2004 Mar 9;43(9):2533-40. PubMed PMID: 14992590. 869: Imhof I, Flury I, Vionnet C, Roubaty C, Egger D, Conzelmann A. Glycosylphosphatidylinositol (GPI) proteins of Saccharomyces cerevisiae contain ethanolamine phosphate groups on the alpha1,4-linked mannose of the GPI anchor. J Biol Chem. 2004 May 7;279(19):19614-27. Epub 2004 Feb 25. PubMed PMID: 14985347. 870: Gille A, Lushington GH, Mou TC, Doughty MB, Johnson RA, Seifert R. Differential inhibition of adenylyl cyclase isoforms and soluble guanylyl cyclase by purine and pyrimidine nucleotides. J Biol Chem. 2004 May 7;279(19):19955-69. Epub 2004 Feb 23. PubMed PMID: 14981084. 871: Gold JA, Hoshino Y, Hoshino S, Jones MB, Nolan A, Weiden MD. Exogenous gamma and alpha/beta interferon rescues human macrophages from cell death induced by Bacillus anthracis. Infect Immun. 2004 Mar;72(3):1291-7. PubMed PMID: 14977930; PubMed Central PMCID: PMC356021. 872: Seredick SD, Spiegelman GB. The Bacillus subtilis response regulator Spo0A stimulates sigmaA-dependent transcription prior to the major energetic barrier. J Biol Chem. 2004 Apr 23;279(17):17397-403. Epub 2004 Feb 18. PubMed PMID: 14976210. 873: Meijer WJ, Salas M. Relevance of UP elements for three strong Bacillus subtilis phage phi29 promoters. Nucleic Acids Res. 2004 Feb 18;32(3):1166-76. Print 2004. PubMed PMID: 14973248; PubMed Central PMCID: PMC373416. 874: Chen Y, Abdel-Fattah WR, Hulett FM. Residues required for Bacillus subtilis PhoP DNA binding or RNA polymerase interaction: alanine scanning of PhoP effector domain transactivation loop and alpha helix 3. J Bacteriol. 2004 Mar;186(5):1493-502. PubMed PMID: 14973033; PubMed Central PMCID: PMC344424. 875: Park JH, Burns K, Kinsland C, Begley TP. Characterization of two kinases involved in thiamine pyrophosphate and pyridoxal phosphate biosynthesis in Bacillus subtilis: 4-amino-5-hydroxymethyl-2methylpyrimidine kinase and pyridoxal kinase. J Bacteriol. 2004 Mar;186(5):1571-3. PubMed PMID: 14973012; PubMed Central PMCID: PMC344394. 876: Harlow LS, Kadziola A, Jensen KF, Larsen S. Crystal structure of the phosphorolytic exoribonuclease RNase PH from Bacillus subtilis and implications for its quaternary structure and tRNA binding. Protein Sci. 2004 Mar;13(3):668-77. Epub 2004 Feb 6. PubMed PMID: 14767080; PubMed Central PMCID: PMC2286726. 877: Drancourt M, Roux V, Fournier PE, Raoult D. rpoB gene sequence-based identification of aerobic Gram-positive cocci of the genera Streptococcus, Enterococcus, Gemella, Abiotrophia, and Granulicatella. J Clin Microbiol. 2004 Feb;42(2):497-504. PubMed PMID: 14766807; PubMed Central PMCID: PMC344509. 878: Prágai Z, Allenby NE, O'Connor N, Dubrac S, Rapoport G, Msadek T, Harwood CR. Transcriptional regulation of the phoPR operon in Bacillus subtilis. J Bacteriol. 2004 Feb;186(4):1182-90. PubMed PMID: 14762014; PubMed Central PMCID: PMC344217. 879: Dubrac S, Msadek T. Identification of genes controlled by the essential YycG/YycF two-component system of Staphylococcus aureus. J Bacteriol. 2004 Feb;186(4):1175-81. PubMed PMID: 14762013; PubMed Central PMCID: PMC344212. 880: Susanna KA, van der Werff AF, den Hengst CD, Calles B, Salas M, Venema G, Hamoen LW, Kuipers OP. Mechanism of transcription activation at the comG promoter by the competence transcription factor ComK of Bacillus subtilis. J Bacteriol. 2004 Feb;186(4):1120-8. PubMed PMID: 14762007; PubMed Central PMCID: PMC344208. 881: Itoh H, Takahashi A, Adachi K, Noji H, Yasuda R, Yoshida M, Kinosita K. Mechanically driven ATP synthesis by F1-ATPase. Nature. 2004 Jan 29;427(6973):465-8. PubMed PMID: 14749837. 882: Darieva Z, Lasunskaia EB, Campos MN, Kipnis TL, Da Silva WD. Activation of phosphatidylinositol 3-kinase and c-Jun-N-terminal kinase cascades enhances NF-kappaB-dependent gene transcription in BCG-stimulated macrophages through promotion of p65/p300 binding. J Leukoc Biol. 2004 Apr;75(4):689-97. Epub 2004 Jan 23. PubMed PMID: 14742634. 883: Pavlova P, Shimabukuro K, Hisabori T, Groth G, Lill H, Bald D. Complete inhibition and partial Re-activation of single F1-ATPase molecules by tentoxin: new properties of the re-activated enzyme. J Biol Chem. 2004 Mar 12;279(11):9685-8. Epub 2004 Jan 22. PubMed PMID: 14739290. 884: Inoue-Nagata AK, Albuquerque LC, Rocha WB, Nagata T. A simple method for cloning the complete begomovirus genome using the bacteriophage phi29 DNA polymerase. J Virol Methods. 2004 Mar 15;116(2):209-11. PubMed PMID: 14738990. 885: Verdrengh M, Collins LV, Bergin P, Tarkowski A. Phytoestrogen genistein as an anti-staphylococcal agent. Microbes Infect. 2004 Jan;6(1):86-92. PubMed PMID: 14738897. 886: Hunger K, Beckering CL, Marahiel MA. Genetic evidence for the temperature-sensing ability of the membrane domain of the Bacillus subtilis histidine kinase DesK. FEMS Microbiol Lett. 2004 Jan 15;230(1):41-6. PubMed PMID: 14734164. 887: Keis S, Kaim G, Dimroth P, Cook GM. Cloning and molecular characterization of the atp operon encoding for the F1F0-ATP synthase from a thermoalkaliphilic Bacillus sp. strain TA2.A1. Biochim Biophys Acta. 2004 Jan 5;1676(1):112-7. PubMed PMID: 14732496. 888: Nishizaka T, Oiwa K, Noji H, Kimura S, Muneyuki E, Yoshida M, Kinosita K Jr. Chemomechanical coupling in F1-ATPase revealed by simultaneous observation of nucleotide kinetics and rotation. Nat Struct Mol Biol. 2004 Feb;11(2):142-8. Epub 2004 Jan 18. PubMed PMID: 14730353. 889: Truniger V, Lázaro JM, Salas M. Function of the C-terminus of phi29 DNA polymerase in DNA and terminal protein binding. Nucleic Acids Res. 2004 Jan 16;32(1):361-70. Print 2004. PubMed PMID: 14729920; PubMed Central PMCID: PMC373294. 890: Saito K, Ohara N, Hotokezaka H, Fukumoto S, Yuasa K, Naito M, Fujiwara T, Nakayama K. Infection-induced up-regulation of the costimulatory molecule 4-1BB in osteoblastic cells and its inhibitory effect on M-CSF/RANKL-induced in vitro osteoclastogenesis. J Biol Chem. 2004 Apr 2;279(14):13555-63. Epub 2004 Jan 16. PubMed PMID: 14729681. 891: Panchal RG, Hermone AR, Nguyen TL, Wong TY, Schwarzenbacher R, Schmidt J, Lane D, McGrath C, Turk BE, Burnett J, Aman MJ, Little S, Sausville EA, Zaharevitz DW, Cantley LC, Liddington RC, Gussio R, Bavari S. Identification of small molecule inhibitors of anthrax lethal factor. Nat Struct Mol Biol. 2004 Jan;11(1):67-72. Epub 2003 Dec 29. PubMed PMID: 14718925. 892: Ortigosa AD, Kimmel JL, Reinhart GD. Disentangling the web of allosteric communication in a homotetramer: heterotropic inhibition of phosphofructokinase from Bacillus stearothermophilus. Biochemistry. 2004 Jan 20;43(2):577-86. PubMed PMID: 14717614. 893: Babitzke P, Schaak J, Yakhnin AV, Bevilacqua PC. Role of RNA structure in transcription attenuation in Bacillus subtilis: the trpEDCFBA operon as a model system. Methods Enzymol. 2003;371:392-404. PubMed PMID: 14712717. 894: Seredick SD, Turner BM, Spiegelman GB. Assay of transcription modulation by SpoOA of Bacillus subtilis. Methods Enzymol. 2003;370:312-23. PubMed PMID: 14712656. 895: Helmann JD. Purification of Bacillus subtilis RNA polymerase and associated factors. Methods Enzymol. 2003;370:10-24. PubMed PMID: 14712630. 896: Dang O, Navarro L, Anderson K, David M. Cutting edge: anthrax lethal toxin inhibits activation of IFN-regulatory factor 3 by lipopolysaccharide. J Immunol. 2004 Jan 15;172(2):747-51. 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PhyA, a secreted protein of Xanthomonas oryzae pv. oryzae, is required for optimum virulence and growth on phytic acid as a sole phosphate source. Mol Plant Microbe Interact. 2003 Nov;16(11):973-82. PubMed PMID: 14601665. 922: Nakano S, Küster-Schöck E, Grossman AD, Zuber P. Spx-dependent global transcriptional control is induced by thiol-specific oxidative stress in Bacillus subtilis. Proc Natl Acad Sci U S A. 2003 Nov 11;100(23):13603-8. Epub 2003 Nov 3. PubMed PMID: 14597697; PubMed Central PMCID: PMC263860. 923: Sudarsan N, Wickiser JK, Nakamura S, Ebert MS, Breaker RR. An mRNA structure in bacteria that controls gene expression by binding lysine. Genes Dev. 2003 Nov 1;17(21):2688-97. PubMed PMID: 14597663; PubMed Central PMCID: PMC280618. 924: Tangney M, Galinier A, Deutscher J, Mitchell WJ. Analysis of the elements of catabolite repression in Clostridium acetobutylicum ATCC 824. J Mol Microbiol Biotechnol. 2003;6(1):6-11. 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Leucine 381 is critical for pentamerization and helicase binding of the Bacillus tau protein. Biochemistry. 2003 Sep 23;42(37):10955-64. PubMed PMID: 12974630. 937: Juy M, Penin F, Favier A, Galinier A, Montserret R, Haser R, Deutscher J, Böckmann A. Dimerization of Crh by reversible 3D domain swapping induces structural adjustments to its monomeric homologue Hpr. J Mol Biol. 2003 Sep 26;332(4):767-76. PubMed PMID: 12972249. 938: Mijakovic I, Poncet S, Boël G, Mazé A, Gillet S, Jamet E, Decottignies P, Grangeasse C, Doublet P, Le Maréchal P, Deutscher J. Transmembrane modulator-dependent bacterial tyrosine kinase activates UDP-glucose dehydrogenases. EMBO J. 2003 Sep 15;22(18):4709-18. PubMed PMID: 12970183; PubMed Central PMCID: PMC212725. 939: Gershanovich VN. [The pleiotropic function of the phosphoenolpyruvate-dependent phosphotransferase system in bacteria. Communication II]. Mol Gen Mikrobiol Virusol. 2003;(3):3-8. Review. Russian. 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Loading peptidyl-coenzyme A onto peptidyl carrier proteins: a novel approach in characterizing macrocyclization by thioesterase domains. J Am Chem Soc. 2003 Sep 10;125(36):10862-6. PubMed PMID: 12952465. 945: Chen CC, Lewis RJ, Harris R, Yudkin MD, Delumeau O. A supramolecular complex in the environmental stress signalling pathway of Bacillus subtilis. Mol Microbiol. 2003 Sep;49(6):1657-69. PubMed PMID: 12950928. 946: Howell A, Dubrac S, Andersen KK, Noone D, Fert J, Msadek T, Devine K. Genes controlled by the essential YycG/YycF two-component system of Bacillus subtilis revealed through a novel hybrid regulator approach. Mol Microbiol. 2003 Sep;49(6):1639-55. PubMed PMID: 12950927. 947: Doan T, Servant P, Tojo S, Yamaguchi H, Lerondel G, Yoshida K, Fujita Y, Aymerich S. The Bacillus subtilis ywkA gene encodes a malic enzyme and its transcription is activated by the YufL/YufM two-component system in response to malate. Microbiology. 2003 Sep;149(Pt 9):2331-43. 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Chelerythrin activates caspase-8, downregulates FLIP long and short, and overcomes resistance to tumour necrosis factor-related apoptosis-inducing ligand in KG1a cells. Br J Haematol. 2003 Aug;122(3):489-97. PubMed PMID: 12877678. 965: Yasuda R, Masaike T, Adachi K, Noji H, Itoh H, Kinosita K Jr. The ATP-waiting conformation of rotating F1-ATPase revealed by single-pair fluorescence resonance energy transfer. Proc Natl Acad Sci U S A. 2003 Aug 5;100(16):9314-8. Epub 2003 Jul 22. PubMed PMID: 12876203; PubMed Central PMCID: PMC170915. 966: Gardino AK, Volkman BF, Cho HS, Lee SY, Wemmer DE, Kern D. The NMR solution structure of BeF(3)(-)-activated Spo0F reveals the conformational switch in a phosphorelay system. J Mol Biol. 2003 Aug 1;331(1):245-54. PubMed PMID: 12875849. 967: Gagyi C, Bucurenci N, Sîrbu O, Labesse G, Ionescu M, Ofiteru A, Assairi L, Landais S, Danchin A, Bârzu O, Gilles AM. UMP kinase from the Gram-positive bacterium Bacillus subtilis is strongly dependent on GTP for optimal activity. Eur J Biochem. 2003 Aug;270(15):3196-204. PubMed PMID: 12869195. 968: Agrawal A, Lingappa J, Leppla SH, Agrawal S, Jabbar A, Quinn C, Pulendran B. Impairment of dendritic cells and adaptive immunity by anthrax lethal toxin. Nature. 2003 Jul 17;424(6946):329-34. PubMed PMID: 12867985. 969: Clausen VA, Bae W, Throup J, Burnham MK, Rosenberg M, Wallis NG. Biochemical characterization of the first essential two-component signal transduction system from Staphylococcus aureus and Streptococcus pneumoniae. J Mol Microbiol Biotechnol. 2003;5(4):252-60. PubMed PMID: 12867749. 970: Cook GM, Keis S, Morgan HW, von Ballmoos C, Matthey U, Kaim G, Dimroth P. Purification and biochemical characterization of the F1Fo-ATP synthase from thermoalkaliphilic Bacillus sp. strain TA2.A1. J Bacteriol. 2003 Aug;185(15):4442-9. 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Autophosphorylation of the Escherichia coli protein kinase Wzc regulates tyrosine phosphorylation of Ugd, a UDP-glucose dehydrogenase. J Biol Chem. 2003 Oct 10;278(41):39323-9. Epub 2003 Jul 7. PubMed PMID: 12851388. 975: Rocha EP, Danchin A. Essentiality, not expressiveness, drives gene-strand bias in bacteria. Nat Genet. 2003 Aug;34(4):377-8. PubMed PMID: 12847524. 976: Mizuta R, Mizuta M, Kitamura D. Atomic force microscopy analysis of rolling circle amplification of plasmid DNA. Arch Histol Cytol. 2003 May;66(2):175-81. PubMed PMID: 12846557. 977: Ko KS, Kim JM, Kim JW, Jung BY, Kim W, Kim IJ, Kook YH. Identification of Bacillus anthracis by rpoB sequence analysis and multiplex PCR. J Clin Microbiol. 2003 Jul;41(7):2908-14. PubMed PMID: 12843020; PubMed Central PMCID: PMC165277. 978: Madec E, Stensballe A, Kjellström S, Cladière L, Obuchowski M, Jensen ON, Séror SJ. Mass spectrometry and site-directed mutagenesis identify several autophosphorylated residues required for the activity of PrkC, a Ser/Thr kinase from Bacillus subtilis. J Mol Biol. 2003 Jul 11;330(3):459-72. PubMed PMID: 12842463. 979: Mukai T, Kawai S, Matsukawa H, Matuo Y, Murata K. Characterization and molecular cloning of a novel enzyme, inorganic polyphosphate/ATP-glucomannokinase, of Arthrobacter sp. strain KM. Appl Environ Microbiol. 2003 Jul;69(7):3849-57. PubMed PMID: 12839753; PubMed Central PMCID: PMC165190. 980: Ladds JC, Muchová K, Blaskovic D, Lewis RJ, Brannigan JA, Wilkinson AJ, Barák I. The response regulator Spo0A from Bacillus subtilis is efficiently phosphorylated in Escherichia coli. FEMS Microbiol Lett. 2003 Jun 27;223(2):153-7. PubMed PMID: 12829280. 981: Vazquez GJ, Pettinari MJ, Méndez BS. Evidence of an association between poly(3-hydroxybutyrate) accumulation and phosphotransbutyrylase expression in Bacillus megaterium. Int Microbiol. 2003 Jun;6(2):127-9. 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The nicking homing endonuclease I-BasI is encoded by a group I intron in the DNA polymerase gene of the Bacillus thuringiensis phage Bastille. Nucleic Acids Res. 2003 Jun 15;31(12):3071-7. PubMed PMID: 12799434; PubMed Central PMCID: PMC162337. 986: Kunisawa T. Gene arrangements and branching orders of gram-positive bacteria. J Theor Biol. 2003 Jun 21;222(4):495-503. PubMed PMID: 12781748. 987: Pompeo F, Granet Y, Lavergne JP, Grangeasse C, Nessler S, Jault JM, Galinier A. Regulation and mutational analysis of the HPr kinase/phosphorylase from Bacillus subtilis. Biochemistry. 2003 Jun 10;42(22):6762-71. PubMed PMID: 12779331. 988: Martinez-Canamero M, Ortiz-Codorniu C, Extremera AL, Munoz-Dorado J, Arias JM. phoR1, a gene encoding a new histidine protein kinase Myxococcus xanthus. Antonie Van Leeuwenhoek. 2003;83(4):361-8. PubMed PMID: 12777072. 989: Panina EM, Vitreschak AG, Mironov AA, Gelfand MS. Regulation of biosynthesis and transport of aromatic amino acids in low-GC Gram-positive bacteria. FEMS Microbiol Lett. 2003 May 28;222(2):211-20. PubMed PMID: 12770710. 990: Fukushima T, Ishikawa S, Yamamoto H, Ogasawara N, Sekiguchi J. Transcriptional, functional and cytochemical analyses of the veg gene in Bacillus subtilis. J Biochem. 2003 Apr;133(4):475-83. PubMed PMID: 12761295. 991: Méndez-Samperio P, Ayala H, Vázquez A. NF-kappaB is involved in regulation of CD40 ligand expression on Mycobacterium bovis bacillus Calmette-Guérin-activated human T cells. Clin Diagn Lab Immunol. 2003 May;10(3):376-82. PubMed PMID: 12738634; PubMed Central PMCID: PMC154977. 992: An K, Urban DB, Urban JE, Johnson TC. A mammalian cell regulatory agent, CeReS-18, inhibits yeast cell proliferation but not bacterial replication. Curr Microbiol. 2003 May;46(5):353-8. PubMed PMID: 12732963. 993: Zhao Y, Hindorff LA, Chuang A, Monroe-Augustus M, Lyristis M, Harrison ML, Rudolph FB, Bennett GN. 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Kluyveromyces lactis cytoplasmic plasmid pGKL2: heterologous expression of Orf3p and proof of guanylyltransferase and mRNA-triphosphatase activities. Yeast. 2001 Jun 30;18(9):815-25. PubMed PMID: 11427964. 1216: Takami H, Han CG, Takaki Y, Ohtsubo E. Identification and distribution of new insertion sequences in the genome of alkaliphilic Bacillus halodurans C-125. J Bacteriol. 2001 Jul;183(14):4345-56. PubMed PMID: 11418576; PubMed Central PMCID: PMC95325. 1217: Segura A, Duque E, Hurtado A, Ramos JL. Mutations in genes involved in the flagellar export apparatus of the solvent-tolerant Pseudomonas putida DOT-T1E strain impair motility and lead to hypersensitivity to toluene shocks. J Bacteriol. 2001 Jul;183(14):4127-33. PubMed PMID: 11418551; PubMed Central PMCID: PMC95300. 1218: Weidner-Wells MA, Ohemeng KA, Nguyen VN, Fraga-Spano S, Macielag MJ, Werblood HM, Foleno BD, Webb GC, Barrett JF, Hlasta DJ. Amidino benzimidazole inhibitors of bacterial two-component systems. 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Hemorrhagic activity and muscle damaging effect of Pseudomonas aeruginosa metalloproteinase (elastase). Toxicon. 2001 Sep;39(9):1327-32. PubMed PMID: 11384720. 1224: Dean FB, Nelson JR, Giesler TL, Lasken RS. Rapid amplification of plasmid and phage DNA using Phi 29 DNA polymerase and multiply-primed rolling circle amplification. Genome Res. 2001 Jun;11(6):1095-9. PubMed PMID: 11381035; PubMed Central PMCID: PMC311129. 1225: Freiberg C, Wieland B, Spaltmann F, Ehlert K, Brötz H, Labischinski H. Identification of novel essential Escherichia coli genes conserved among pathogenic bacteria. J Mol Microbiol Biotechnol. 2001 Jul;3(3):483-9. PubMed PMID: 11361082. 1226: Darbon E, Galinier A, Le Coq D, Deutscher J. Phosphotransfer functions mutated Bacillus subtilis HPr-like protein Crh carrying a histidine in the active site. J Mol Microbiol Biotechnol. 2001 Jul;3(3):439-44. Review. PubMed PMID: 11361076. 1227: Penin F, Favier A, Montserret R, Brutscher B, Deutscher J, Marion D, Galinier D. Evidence for a dimerisation state of the Bacillus subtilis catabolite repression HPr-like protein, Crh. J Mol Microbiol Biotechnol. 2001 Jul;3(3):429-32. PubMed PMID: 11361074. 1228: Esquinas-Rychen M, Erni B. Facilitation of bacteriophage lambda DNA injection by inner membrane proteins of the bacterial phosphoenol-pyruvate: carbohydrate phosphotransferase system (PTS). J Mol Microbiol Biotechnol. 2001 Jul;3(3):361-70. PubMed PMID: 11361066. 1229: Méndez-Samperio P, Vázquez A, Morales V, Palma J. Protein tyrosine kinase regulates FAS-mediated apoptosis in human BCG-infected monocytes. J Interferon Cytokine Res. 2001 Apr;21(4):209-17. PubMed PMID: 11359651. 1230: Firth JD, Putnins EE, Larjava H, Uitto VJ. Exogenous phospholipase C stimulates epithelial cell migration and integrin expression in vitro. Wound Repair Regen. 2001 Mar-Apr;9(2):86-94. PubMed PMID: 11350646. 1231: Kormanec J, Sevcíková B, Homérová D. Cloning of a two-component regulatory system probably involved in the regulation of chitinase in Streptomyces coelicolor A3(2). Folia Microbiol (Praha). 2000;45(5):397-406. PubMed PMID: 11347267. 1232: Gil C, Chaib-Oukadour I, Blasi J, Aguilera J. HC fragment (C-terminal portion of the heavy chain) of tetanus toxin activates protein kinase C isoforms and phosphoproteins involved in signal transduction. Biochem J. 2001 May 15;356(Pt 1):97-103. PubMed PMID: 11336640; PubMed Central PMCID: PMC1221816. 1233: Paul S, Zhang X, Hulett FM. Two ResD-controlled promoters regulate ctaA expression in Bacillus subtilis. J Bacteriol. 2001 May;183(10):3237-46. PubMed PMID: 11325953; PubMed Central PMCID: PMC95225. 1234: Djordjevic GM, Tchieu JH, Saier MH Jr. Genes involved in control of galactose uptake in Lactobacillus brevis and reconstitution of the regulatory system in Bacillus subtilis. J Bacteriol. 2001 May;183(10):3224-36. 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Bacillus subtilis NhaC, an Na+/H+ antiporter, influences expression of the phoPR operon and production of alkaline phosphatases. J Bacteriol. 2001 Apr;183(8):2505-15. PubMed PMID: 11274110; PubMed Central PMCID: PMC95167. 1247: Duesbery NS, Resau J, Webb CP, Koochekpour S, Koo HM, Leppla SH, Vande Woude GF. Suppression of ras-mediated transformation and inhibition of tumor growth and angiogenesis by anthrax lethal factor, a proteolytic inhibitor of multiple MEK pathways. Proc Natl Acad Sci U S A. 2001 Mar 27;98(7):4089-94. Epub 2001 Mar 20. PubMed PMID: 11259649; PubMed Central PMCID: PMC31184. 1248: Riley-Lovingshimer MR, Reinhart GD. Equilibrium binding studies of a tryptophan-shifted mutant of phosphofructokinase from Bacillus stearothermophilus. Biochemistry. 2001 Mar 6;40(9):3002-8. PubMed PMID: 11258913. 1249: Kausalya S, Somogyi R, Orlofsky A, Prystowsky MB. 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Cadmium biosorption by a cadmium resistant strain of Bacillus thuringiensis: regulation and optimization of cell surface affinity for metal cations. Biometals. 2000 Dec;13(4):273-80. PubMed PMID: 11247032. 1254: Zhang S, Scott JM, Haldenwang WG. Loss of ribosomal protein L11 blocks stress activation of the Bacillus subtilis transcription factor sigma(B). J Bacteriol. 2001 Apr;183(7):2316-21. PubMed PMID: 11244072; PubMed Central PMCID: PMC95139. 1255: Contessi S, Bald D, Baeuerlein E, Dabbeni-Sala F, Mavelli I, Lippe G. Fe(III) binding to Bacillus PS3 F(1)ATPase, alphabeta subcomplexes and isolated alpha- and beta-subunits. Biochem Biophys Res Commun. 2001 Mar;281(5):1266-70. PubMed PMID: 11243872. 1256: Condon C, Brechemier-Baey D, Beltchev B, Grunberg-Manago M, Putzer H. Identification of the gene encoding the 5S ribosomal RNA maturase in Bacillus subtilis: mature 5S rRNA is dispensable for ribosome function. RNA. 2001 Feb;7(2):242-53. 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Phylogenetic analyses and comparative genomics of vitamin B6 (pyridoxine) and pyridoxal phosphate biosynthesis pathways. J Mol Microbiol Biotechnol. 2001 Jan;3(1):1-20. Review. PubMed PMID: 11200221. 1262: Matthijs S, Koedam N, Cornelis P, De Greve H. The trehalose operon of Pseudomonas fluorescens ATCC 17400. Res Microbiol. 2000 Dec;151(10):845-51. PubMed PMID: 11191810. 1263: Sciochetti SA, Piggot PJ, Blakely GW. Identification and characterization of the dif Site from Bacillus subtilis. J Bacteriol. 2001 Feb;183(3):1058-68. PubMed PMID: 11208805; PubMed Central PMCID: PMC94974. 1264: Burkholder WF, Kurtser I, Grossman AD. Replication initiation proteins regulate a developmental checkpoint in Bacillus subtilis. Cell. 2001 Jan 26;104(2):269-79. PubMed PMID: 11207367. 1265: Kim SB, Shin BS, Choi SK, Kim CK, Park SH. Involvement of acetyl phosphate in the in vivo activation of the response regulator ComA in Bacillus subtilis. FEMS Microbiol Lett. 2001 Feb 20;195(2):179-83. 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Mutational analysis of genes encoding the early flagellar components of Helicobacter pylori: evidence for transcriptional regulation of flagellin A biosynthesis. J Bacteriol. 2000 Sep;182(18):5274-7. PubMed PMID: 10960117; PubMed Central PMCID: PMC94681. 1324: Noguchi N, Takada K, Katayama J, Emura A, Sasatsu M. Regulation of transcription of the mph(A) gene for macrolide 2'-phosphotransferase I in Escherichia coli: characterization of the regulatory gene mphR(A). J Bacteriol. 2000 Sep;182(18):5052-8. PubMed PMID: 10960087; PubMed Central PMCID: PMC94651. 1325: Kato-Yamada Y, Yoshida M, Hisabori T. Movement of the helical domain of the epsilon subunit is required for the activation of thermophilic F1-ATPase. J Biol Chem. 2000 Nov 17;275(46):35746-50. PubMed PMID: 10958801. 1326: Stentz R, Zagorec M. Ribose utilization in Lactobacillus sakei: analysis of the regulation of the rbs operon and putative involvement of a new transporter. J Mol Microbiol Biotechnol. 1999 Aug;1(1):165-73. 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Pyruvate kinase from the thermophilic eubacterium Bacillus acidocaldarius as probe to monitor the sodium concentrations in the blood. Biophys Chem. 2000 Apr 14;84(2):167-76. PubMed PMID: 10796031. 1358: Scott JM, Ju J, Mitchell T, Haldenwang WG. The Bacillus subtilis GTP binding protein obg and regulators of the sigma(B) stress response transcription factor cofractionate with ribosomes. J Bacteriol. 2000 May;182(10):2771-7. PubMed PMID: 10781545; PubMed Central PMCID: PMC101985. 1359: Studholme DJ, Buck M. The biology of enhancer-dependent transcriptional regulation in bacteria: insights from genome sequences. FEMS Microbiol Lett. 2000 May 1;186(1):1-9. Review. PubMed PMID: 10779705. 1360: Bald D, Noji H, Stumpp MT, Yoshida M, Hisabori T. ATPase activity of a highly stable alpha(3)beta(3)gamma subcomplex of thermophilic F(1) can be regulated by the introduced regulatory region of gamma subunit of chloroplast F(1). J Biol Chem. 2000 Apr 28;275(17):12757-62. 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