TBLASTN 2.2.28+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: X5.fasta
           1,868 sequences; 23,962,143 total letters



Query= CYB_SPIPN Q950S3 Cytochrome b (Complex III subunit 3) (Complex III
subunit III) (Cytochrome b-c1 complex subunit 3)
(Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)

Length=396
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  unplaced-887                                                         207    6e-58
  unplaced-63                                                          136    2e-37
  scaffold-451                                                        28.9    6.3  


> unplaced-887
Length=30515

 Score =  207 bits (527),  Expect = 6e-58, Method: Compositional matrix adjust.
 Identities = 127/220 (58%), Positives = 155/220 (70%), Gaps = 0/220 (0%)
 Frame = -1

Query  144   ATVITNLLSAIPWIGTDFVLFVWGGFSVDNATLNRFFSLHYLLPFIlaalvvmhllalhQ  203
             ATVITNLLSAIP++G D V+ VWGGFSV N TLNRF+SLHYLLPFIL  LV  HL ALH+
Sbjct  7403  ATVITNLLSAIPYLGQDLVILVWGGFSVGNPTLNRFYSLHYLLPFILLGLVAYHLSALHE  7224

Query  204   DGSNNPEGISSSSDRLRFHPYFTSKDLVGFVWMAILLSIFVFFAPYYLGHPDNSIPANPL  263
               SNNP GISS++D++ FHPYFT KDL  F    IL S  VF+ P YL HPDN IPANPL
Sbjct  7223  HASNNPLGISSNTDKIYFHPYFTIKDLYYFTLFLILFSTLVFYFPNYLNHPDNYIPANPL  7044

Query  264   VTPHSIVPEWYFLPFYAILRAIPSKLGGVIAMFGALLILFPLALIHTNNVRSNRYRPLLN  323
             VTP SI PEWY L  YAILR IP+KL GV+A+  +LLIL  L  I    +RS   R    
Sbjct  7043  VTPLSIQPEWYLLAPYAILRTIPNKLLGVVALALSLLILLILPFISQFAIRSYTIRSYSK  6864

Query  324   LLFWIFVFNFFVLLWVGAKPIAQPYILIGQISTIIYFLYF  363
             + +W+F+ ++ +L+  GA PI++  I +  +S+I YF YF
Sbjct  6863  IFYWLFIGSYLLLVICGALPISEEIINLSILSSIYYFSYF  6744


 Score =  149 bits (375),  Expect = 3e-38, Method: Compositional matrix adjust.
 Identities = 73/119 (61%), Positives = 92/119 (77%), Gaps = 0/119 (0%)
 Frame = -2

Query  9     ILVLVNDFVIDSPLPTNLTYFWNFGSLLGVNLVILIISGLTLAMHYTPNTLLAFSSVEHI  68
             ++ L  D+ + S LP+N++  WN+GSLLGV LVI I++G+TL MHY  N  L+F+ VEHI
Sbjct  9889  MIKLFTDYFVYSGLPSNISINWNYGSLLGVILVIQIMTGVTLGMHYAANIELSFNLVEHI  9710

Query  69    MRDVNNGWLLRYIHANGASFFFIWVYLHIGRNLYYGSYRSPRGLLWSIGVVIFILMMAT  127
             MRD+N GWL+RYIHANGAS FF++VYLHI R LY GSY  PR  LW+IGVVI+ILMM  
Sbjct  9709  MRDINAGWLVRYIHANGASLFFLFVYLHIARGLYAGSYTYPRHKLWNIGVVIYILMMGE  9533


 Score = 35.8 bits (81),  Expect = 0.041, Method: Compositional matrix adjust.
 Identities = 14/17 (82%), Positives = 16/17 (94%), Gaps = 0/17 (0%)
 Frame = -1

Query  127   TAFIGYVLPWGQMSFWG  143
             TAF+GYVLP+GQMS WG
Sbjct  8585  TAFLGYVLPFGQMSIWG  8535


> unplaced-63
Length=685

 Score =  136 bits (343),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 71/166 (43%), Positives = 102/166 (61%), Gaps = 0/166 (0%)
 Frame = +1

Query  203  QDGSNNPEGISSSSDRLRFHPYFTSKDLVGFVWMAILLSIFVFFAPYYLGHPDNSIPANP  262
            Q GS NP GI++ SD + F+PYF +KDLV  + ++   +  V F P  LGHPDN+IPANP
Sbjct  25   QYGSTNPLGINAQSDLVDFYPYFYTKDLVAALRLSFGAAYLVNFNPELLGHPDNNIPANP  204

Query  263  LVTPHSIVPEWYFLPFYAILRAIPSKLGGVIAMFGALLILFPLALIHTNNVRSNRYRPLL  322
              TP  IVPEWYFL  YAILR+IP+KL GV A+      L  L  +H  + R   +R L 
Sbjct  205  YATPRHIVPEWYFLWVYAILRSIPNKLAGVRAIGLVFAALAALPYMHKPSCRGPSFRRLH  384

Query  323  NLLFWIFVFNFFVLLWVGAKPIAQPYILIGQISTIIYFLYFVILMI  368
             +  W  + +F +L ++G +P+  PY+++GQ  T+ +F   + L +
Sbjct  385  KV*VWALIGDFMLLSYLGQQPVEPPYVVLGQRRTVRFFSLLIGLCV  522


> scaffold-451
Length=486760

 Score = 28.9 bits (63),  Expect = 6.3, Method: Compositional matrix adjust.
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 0/25 (0%)
 Frame = +2

Query  351     IGQISTIIYFLYFVILMILGCIMTY  375
               +G  + +IY LYF  L+IL C+  Y
Sbjct  439802  VGDAAKVIYHLYFEYLIILTCVDEY  439876



Lambda      K        H        a         alpha
   0.333    0.148    0.492    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 2308971976


  Database: X5.fasta
    Posted date:  Nov 1, 2020  9:58 PM
  Number of letters in database: 23,962,143
  Number of sequences in database:  1,868



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40