TBLASTN 2.2.28+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: X5.fasta 1,868 sequences; 23,962,143 total letters Query= H32_HUMAN Q71DI3 Histone H3.2 (Histone H3/m) (Histone H3/o) Length=136 Score E Sequences producing significant alignments: (Bits) Value scaffold-104 256 2e-78 scaffold-126 256 2e-78 unplaced-984 192 4e-63 scaffold-153 171 5e-54 scaffold-70 66.6 2e-14 unplaced-368 64.3 5e-13 scaffold-157 31.2 0.16 unplaced-13 27.7 1.4 scaffold-693 27.7 2.5 unplaced-752 26.2 2.6 scaffold-17 27.3 2.6 scaffold-168 27.3 3.1 scaffold-100 26.9 3.5 scaffold-242 26.6 5.0 > scaffold-104 Length=736462 Score = 256 bits (654), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 129/136 (95%), Positives = 131/136 (96%), Gaps = 1/136 (1%) Frame = +3 Query 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60 MARTKQTARKSTGGKAPRKQLATKA RKS PATGGVKKPHRYRPGTVALREIRRYQKSTE Sbjct 185496 MARTKQTARKSTGGKAPRKQLATKA-RKSTPATGGVKKPHRYRPGTVALREIRRYQKSTE 185672 Query 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120 LLIRKLPFQRLVREIAQDFKTDLRFQSSA+ ALQEA+EAYLV LFEDTNLCAIHAKRVTI Sbjct 185673 LLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAAEAYLVSLFEDTNLCAIHAKRVTI 185852 Query 121 MPKDIQLARRIRGERA 136 PKDIQLARRIRGERA Sbjct 185853 FPKDIQLARRIRGERA 185900 Score = 256 bits (654), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 129/136 (95%), Positives = 131/136 (96%), Gaps = 1/136 (1%) Frame = -2 Query 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60 MARTKQTARKSTGGKAPRKQLATKA RKS PATGGVKKPHRYRPGTVALREIRRYQKSTE Sbjct 178362 MARTKQTARKSTGGKAPRKQLATKA-RKSTPATGGVKKPHRYRPGTVALREIRRYQKSTE 178186 Query 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120 LLIRKLPFQRLVREIAQDFKTDLRFQSSA+ ALQEA+EAYLV LFEDTNLCAIHAKRVTI Sbjct 178185 LLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAAEAYLVSLFEDTNLCAIHAKRVTI 178006 Query 121 MPKDIQLARRIRGERA 136 PKDIQLARRIRGERA Sbjct 178005 FPKDIQLARRIRGERA 177958 > scaffold-126 Length=92370 Score = 256 bits (653), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 129/136 (95%), Positives = 131/136 (96%), Gaps = 1/136 (1%) Frame = -3 Query 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60 MARTKQTARKSTGGKAPRKQLATKA RKS PATGGVKKPHRYRPGTVALREIRRYQKSTE Sbjct 85096 MARTKQTARKSTGGKAPRKQLATKA-RKSTPATGGVKKPHRYRPGTVALREIRRYQKSTE 84920 Query 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120 LLIRKLPFQRLVREIAQDFKTDLRFQSSA+ ALQEA+EAYLV LFEDTNLCAIHAKRVTI Sbjct 84919 LLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAAEAYLVSLFEDTNLCAIHAKRVTI 84740 Query 121 MPKDIQLARRIRGERA 136 PKDIQLARRIRGERA Sbjct 84739 FPKDIQLARRIRGERA 84692 Score = 65.1 bits (157), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/37 (95%), Positives = 35/37 (95%), Gaps = 1/37 (3%) Frame = +2 Query 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVK 37 MARTKQTARKSTGGKAPRKQLATK ARKS PATGGVK Sbjct 92261 MARTKQTARKSTGGKAPRKQLATK-ARKSTPATGGVK 92368 > unplaced-984 Length=389 Score = 192 bits (487), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 93/98 (95%), Positives = 95/98 (97%), Gaps = 0/98 (0%) Frame = +2 Query 39 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASE 98 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSA+ ALQEA+E Sbjct 2 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAAE 181 Query 99 AYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136 AYLV LFEDTNLCAIHAKRVTI PKDIQLARRIRGERA Sbjct 182 AYLVSLFEDTNLCAIHAKRVTIFPKDIQLARRIRGERA 295 > scaffold-153 Length=574 Score = 171 bits (432), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 84/89 (94%), Positives = 86/89 (97%), Gaps = 0/89 (0%) Frame = -2 Query 48 ALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFED 107 ALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSA+ ALQEA+EAYLV LFED Sbjct 573 ALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAAEAYLVSLFED 394 Query 108 TNLCAIHAKRVTIMPKDIQLARRIRGERA 136 TNLCAIHAKRVTI PKDIQLARRIRGERA Sbjct 393 TNLCAIHAKRVTIFPKDIQLARRIRGERA 307 > scaffold-70 Length=635 Score = 66.6 bits (161), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 36/38 (95%), Positives = 36/38 (95%), Gaps = 1/38 (3%) Frame = +3 Query 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKK 38 MARTKQTARKSTGGKAPRKQLATK ARKS PATGGVKK Sbjct 525 MARTKQTARKSTGGKAPRKQLATK-ARKSTPATGGVKK 635 > unplaced-368 Length=899 Score = 64.3 bits (155), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 35/37 (95%), Positives = 35/37 (95%), Gaps = 1/37 (3%) Frame = +1 Query 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVK 37 MARTKQTARKSTGGKAPRKQLATK ARKS PATGGVK Sbjct 790 MARTKQTARKSTGGKAPRKQLATK-ARKSTPATGGVK 897 > scaffold-157 Length=706690 Score = 31.2 bits (69), Expect = 0.16, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 29/61 (48%), Gaps = 7/61 (11%) Frame = +1 Query 21 LATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK 80 LATK A ++ ++ HRY P V +QKS + + L +QR + +FK Sbjct 253978 LATKTQFTQAASSSDLQTRHRYPPNFV-------HQKSNSVYVSSLTYQRRNSTLYANFK 254136 Query 81 T 81 T Sbjct 254137 T 254139 > unplaced-13 Length=505 Score = 27.7 bits (60), Expect = 1.4, Method: Compositional matrix adjust. Identities = 15/42 (36%), Positives = 20/42 (48%), Gaps = 2/42 (5%) Frame = +3 Query 78 DFKTDLR--FQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117 D+ DLR F V + E + + FEDTN+ A KR Sbjct 261 DYMVDLRNSFNVRFVFGVLTTYEKWRILWFEDTNIAATETKR 386 > scaffold-693 Length=1268102 Score = 27.7 bits (60), Expect = 2.5, Method: Composition-based stats. Identities = 18/61 (30%), Positives = 28/61 (46%), Gaps = 7/61 (11%) Frame = +2 Query 21 LATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK 80 LATK A ++ ++ HRY P V +QKS + + +QR + +FK Sbjct 1197674 LATKTQFTQAASSSDLQTRHRYPPNFV-------HQKSNSVYVSSPTYQRRNSTLYANFK 1197832 Query 81 T 81 T Sbjct 1197833 T 1197835 > unplaced-752 Length=253 Score = 26.2 bits (56), Expect = 2.6, Method: Compositional matrix adjust. Identities = 10/28 (36%), Positives = 17/28 (61%), Gaps = 0/28 (0%) Frame = +1 Query 63 IRKLPFQRLVREIAQDFKTDLRFQSSAV 90 + K+P RLV++ + T+L+ SAV Sbjct 115 LNKVPISRLVKQASSILSTNLQISQSAV 198 > scaffold-17 Length=2125590 Score = 27.3 bits (59), Expect = 2.6, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 37/85 (44%), Gaps = 15/85 (18%) Frame = -1 Query 10 KSTGGKAPRKQLA----TKAARKSAP----ATGGVKKPHRYRPGTV--ALRE----IRRY 55 KS G K QLA T AR S G K + GTV L E I + Sbjct 784575 KSIGRKEKISQLAMSESTTKARSSVDNIDDQVNGKVKAQKVYSGTVYNVLGETGDLINHF 784396 Query 56 QKSTELL-IRKLPFQRLVREIAQDF 79 +T L+ IRK+PF L+ + QD+ Sbjct 784395 APNTSLISIRKVPFDNLMASLVQDY 784321 > scaffold-168 Length=4885 Score = 27.3 bits (59), Expect = 3.1, Method: Composition-based stats. Identities = 15/42 (36%), Positives = 20/42 (48%), Gaps = 2/42 (5%) Frame = -1 Query 78 DFKTDLR--FQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117 D+ DLR F V + E + + FEDTN+ A KR Sbjct 3130 DYMVDLRNSFNVRFVFGVLTTYEKWRILWFEDTNIAATETKR 3005 > scaffold-100 Length=762135 Score = 26.9 bits (58), Expect = 3.5, Method: Compositional matrix adjust. Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 0/31 (0%) Frame = -1 Query 104 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134 L +D + ++ + R T+MPK + RR++ E Sbjct 157749 LLDDEDTQSVSSSRATMMPKGYLIKRRVKDE 157657 Score = 26.9 bits (58), Expect = 3.8, Method: Composition-based stats. Identities = 17/61 (28%), Positives = 29/61 (48%), Gaps = 1/61 (2%) Frame = -1 Query 58 STELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117 S +L I + RL + + + L Q + L ++ + +F+D LC +HAKR Sbjct 513690 SNKLYIADRRYSRL-KTVHKPLGQSLFVQDFIIFTLYLRRSSFYMFIFQDEVLCHLHAKR 513514 Query 118 V 118 V Sbjct 513513 V 513511 > scaffold-242 Length=71096 Score = 26.6 bits (57), Expect = 5.0, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 0/58 (0%) Frame = +2 Query 13 GGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQR 70 G P+ LA K A T +K P G + +R I++YQ + L+ + LPF + Sbjct 69701 GRAVPQ*LLAGKDACG*PSTTLVLKVPPMKSYGWIVIRRIQKYQPRSTLICQCLPFSQ 69874 Lambda K H a alpha 0.321 0.131 0.361 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 383418385 Database: X5.fasta Posted date: Dec 10, 2019 3:48 AM Number of letters in database: 23,962,143 Number of sequences in database: 1,868 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40